Clone Information

BLAST Search Result

Clone Name	bags8p08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha sub...	166	2e-46
2	MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase...	172	2e-45
3	MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase...	169	2e-44
4	UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex co...	83	4e-16
5	MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha sub...	80	4e-15
6	MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subuni...	78	1e-14
7	MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subu...	78	1e-14
8	UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex co...	77	3e-14
9	UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex co...	77	3e-14
10	MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subu...	77	3e-14
11	MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subu...	76	5e-14
12	MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subu...	76	5e-14
13	MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha sub...	74	3e-13
14	MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha sub...	72	8e-13
15	MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha sub...	72	1e-12
16	MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha sub...	71	2e-12
17	MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subun...	71	2e-12
18	MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subu...	70	5e-12
19	MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase ...	69	6e-12
20	UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex co...	69	6e-12
21	UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex co...	69	1e-11
22	UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex co...	68	1e-11
23	UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core...	68	2e-11
24	Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4....	67	3e-11
25	MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subu...	66	6e-11
26	UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex co...	65	9e-11
27	MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase ...	64	3e-10
28	MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha sub...	64	4e-10
29	MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subu...	62	8e-10
30	Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4....	58	1e-08
31	Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (...	58	1e-08
32	Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)	56	6e-08
33	YMXG_BACSU (Q04805) Hypothetical zinc protease ymxG (EC 3.4.99.-...	56	7e-08
34	YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III	56	7e-08
35	MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase ...	56	7e-08
36	UQCR2_SCHPO (P78761) Ubiquinol-cytochrome-c reductase complex co...	55	1e-07
37	UQCR2_ASHGO (Q75CW5) Ubiquinol-cytochrome-c reductase complex co...	49	9e-06
38	UQCR2_YEAST (P07257) Ubiquinol-cytochrome-c reductase complex co...	49	1e-05
39	UQCR2_NEUCR (O60044) Ubiquinol-cytochrome-c reductase complex co...	48	2e-05
40	UQCR2_CANGA (Q6FSJ3) Ubiquinol-cytochrome-c reductase complex co...	46	6e-05
41	UQCR2_KLULA (Q6CWJ6) Ubiquinol-cytochrome-c reductase complex co...	46	8e-05
42	UQCR2_YARLI (Q6C2E3) Ubiquinol-cytochrome-c reductase complex co...	45	2e-04
43	Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)	44	3e-04
44	Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)	44	3e-04
45	UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex co...	38	0.016
46	PQQL_HAEIN (P45181) Probable zinc protease pqqL (EC 3.4.99.-)	32	0.88
47	MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)	30	3.3
48	SMP1L_MOUSE (Q7TN29) Stromal membrane-associated protein 1-like ...	30	3.3
49	PESC_BRARE (P79741) Pescadillo	30	3.3
50	ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repea...	29	9.7
51	ECM33_YEAST (P38248) Extracellular matrix protein 33 precursor	29	9.7

>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (Ubiquinol-cytochrome-c reductase subunit II) (EC
           1.10.2.2)
          Length = 504

 Score =  166 bits (421), Expect(3) = 2e-46
 Identities = 79/130 (60%), Positives = 102/130 (78%)
 Frame = +1

Query: 103 FALPGVTIPPPLADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETL 282
           F L  V + PPL D+VEP KT++TTL NG+K+ASE S   + S+G+YV+CGS+YETP + 
Sbjct: 55  FPLNDVKLSPPLPDYVEPAKTQITTLANGLKVASEASVNPAASIGLYVDCGSIYETPASY 114

Query: 283 GATQLLKKLAFTTTRNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVL 462
           GAT LL+++AF +T NRS LR+VREI AIGG+   SA+RE M Y+Y ALKTY+P+MVE+L
Sbjct: 115 GATHLLERMAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEML 174

Query: 463 VDCVRNPALL 492
            DCVRNPA L
Sbjct: 175 ADCVRNPAFL 184



 Score = 30.4 bits (67), Expect(3) = 2e-46
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 12  SASTSVAQXSSGGFLGWLTGARSNALPPPXF 104
           S+S +VA   SGG   W+TG  S+++ P  F
Sbjct: 25  SSSAAVATKPSGGLFSWITGDTSSSVTPLDF 55



 Score = 29.3 bits (64), Expect(3) = 2e-46
 Identities = 10/18 (55%), Positives = 16/18 (88%)
 Frame = +2

Query: 488 YFDWEVKEEIMKLKAELA 541
           + DWEVKE++ K+KAE++
Sbjct: 183 FLDWEVKEQLEKVKAEIS 200

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>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit|
           2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2)
          Length = 499

 Score =  172 bits (436), Expect(3) = 2e-45
 Identities = 82/134 (61%), Positives = 103/134 (76%)
 Frame = +1

Query: 91  PLQXFALPGVTIPPPLADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYET 270
           P     L GV++PPPL+DHVEP K K TTLPNG+ IA+E SP  + S+G+YV+CGS+YET
Sbjct: 50  PSMNIPLAGVSLPPPLSDHVEPSKLKTTTLPNGLTIATEMSPNPAASIGLYVDCGSIYET 109

Query: 271 PETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEM 450
           P+  GAT LL+++AF +T NRS  R+VREI AIGG+   SA+RE M Y+  ALKTY+PEM
Sbjct: 110 PQFRGATHLLERMAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEM 169

Query: 451 VEVLVDCVRNPALL 492
           VEVL+D VRNPA L
Sbjct: 170 VEVLIDSVRNPAFL 183



 Score = 26.9 bits (58), Expect(3) = 2e-45
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +2

Query: 488 YFDWEVKEEIMKLKAEL 538
           + DWEV EE+ K+K E+
Sbjct: 182 FLDWEVNEELRKVKVEI 198



 Score = 23.1 bits (48), Expect(3) = 2e-45
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 3   AVRSASTSVAQXSSGGFLGWLTGARSNALP 92
           A R AS+S    SS     WL+G  S++LP
Sbjct: 22  ASRYASSSAVATSSSSS-SWLSGGYSSSLP 50

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>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score =  169 bits (429), Expect(2) = 2e-44
 Identities = 81/128 (63%), Positives = 103/128 (80%)
 Frame = +1

Query: 109 LPGVTIPPPLADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGA 288
           L GV++PPPLAD VEP K ++TTLPNG+KIASET+P  + S+G+YV+CGS+YE P   GA
Sbjct: 60  LQGVSLPPPLADKVEPSKLQITTLPNGLKIASETTPNPAASIGLYVDCGSIYEAPYFHGA 119

Query: 289 TQLLKKLAFTTTRNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVD 468
           T LL+++AF +T NR+  R+VREI AIGG+   SA+RE MSY+  ALKTY+PEMVEVL+D
Sbjct: 120 THLLERMAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLID 179

Query: 469 CVRNPALL 492
            VRNPA L
Sbjct: 180 SVRNPAFL 187



 Score = 28.9 bits (63), Expect(2) = 2e-44
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +2

Query: 488 YFDWEVKEEIMKLKAELA 541
           + DWEV EE+ K+K E+A
Sbjct: 186 FLDWEVNEELRKMKVEIA 203

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>UQCR1_MOUSE (Q9CZ13) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 43/110 (39%), Positives = 70/110 (63%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+V+ L NG+++ASE S  ++C+VGV+++ GS YET +  GA   L+ LAF  T+NR  
Sbjct: 47  ETQVSILDNGLRVASEQSSHATCTVGVWIDAGSRYETEKNNGAGYFLEHLAFKGTKNRPG 106

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             + +E+ +IG      + RE  +Y   AL   +P++VE+L D V+N +L
Sbjct: 107 NALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSSL 156

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>MPPA_NEUCR (P23955) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 577

 Score = 80.1 bits (196), Expect = 4e-15
 Identities = 37/110 (33%), Positives = 65/110 (59%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +  +TTL NGV++ASE  P +   VGVY++ GS YE     GA+ ++ +LAF +T  R+ 
Sbjct: 51  RDNITTLSNGVRVASEDLPDAFSGVGVYIDAGSRYENDYVRGASHIMDRLAFKSTSTRTA 110

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             ++  +  +GG+ + +++RE M Y        +P  VE++ + +R+P L
Sbjct: 111 DEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPKL 160

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>MPPB_RAT (Q03346) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 41/110 (37%), Positives = 63/110 (57%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+VT L NG+++ASE S  S+C+VG++++ GS YE  +  G    L+ +AF  T+ RSQ
Sbjct: 57  ETQVTCLENGLRVASENSGISTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           L +  EI  +G       +RE   Y   A    +P  VE+L D ++N  L
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTL 166

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>MPPB_MOUSE (Q9CXT8) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 78.2 bits (191), Expect = 1e-14
 Identities = 41/110 (37%), Positives = 63/110 (57%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+VT L NG+++ASE S  S+C+VG++++ GS YE  +  G    L+ +AF  T+ RSQ
Sbjct: 57  ETQVTCLENGLRVASENSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           L +  EI  +G       +RE   Y   A    +P  VE+L D ++N  L
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNSTL 166

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>UQCR1_HUMAN (P31930) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 41/110 (37%), Positives = 68/110 (61%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+V+ L NG+++ASE S   +C+VGV+++ GS +ET +  GA   L+ LAF  T+NR  
Sbjct: 47  ETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKNNGAGYFLEHLAFKGTKNRPG 106

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             + +E+ ++G      + RE  +Y   AL   +P+ VE+L D V+N +L
Sbjct: 107 SALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCSL 156

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>UQCR1_BOVIN (P31800) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 480

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 40/110 (36%), Positives = 68/110 (61%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+V+ L NG+++ASE S   +C+VGV+++ GS YE+ +  GA   ++ LAF  T+NR  
Sbjct: 47  ETQVSQLDNGLRVASEQSSQPTCTVGVWIDAGSRYESEKNNGAGYFVEHLAFKGTKNRPG 106

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             + +E+ ++G      + RE  +Y   AL   +P+ VE+L D V+N +L
Sbjct: 107 NALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCSL 156

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>MPPB_BOVIN (Q3SZ71) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 490

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 40/110 (36%), Positives = 63/110 (57%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+VT L NG+++ASE S  ++C+VG++++ GS YE  +  G    L+ +AF  T+ RSQ
Sbjct: 58  ETRVTCLENGLRVASEDSGLATCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 117

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           L +  EI  +G       +RE   Y   A    +P  VE+L D ++N  L
Sbjct: 118 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTL 167

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>MPPB_PONPY (Q5REK3) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 489

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 40/110 (36%), Positives = 63/110 (57%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+VT L +G+++ASE S  S+C+VG++++ GS YE  +  G    L+ +AF  T+ RSQ
Sbjct: 57  ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           L +  EI  +G       +RE   Y   A    +P  VE+L D ++N  L
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTL 166

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>MPPB_HUMAN (O75439) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (P-52)
          Length = 489

 Score = 76.3 bits (186), Expect = 5e-14
 Identities = 40/110 (36%), Positives = 63/110 (57%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           +T+VT L +G+++ASE S  S+C+VG++++ GS YE  +  G    L+ +AF  T+ RSQ
Sbjct: 57  ETRVTCLESGLRVASEDSGLSTCTVGLWIDAGSRYENEKNNGTAHFLEHMAFKGTKKRSQ 116

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           L +  EI  +G       +RE   Y   A    +P  VE+L D ++N  L
Sbjct: 117 LDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNSTL 166

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>MPPA_MOUSE (Q9DC61) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 4/131 (3%)
 Frame = +1

Query: 109 LPGVTIPPPL---ADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPET 279
           LPGV  P P+    D  E  +TKVTTL NG+++AS+   G  C+VG+ +N GS YE    
Sbjct: 47  LPGV--PKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYL 104

Query: 280 LGATQLLKKLAFTTT-RNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVE 456
            G    L+KLAF++T R  S+  ++  +   GG      +R+   Y+  A    +  +V+
Sbjct: 105 SGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVD 164

Query: 457 VLVDCVRNPAL 489
           +L D V +P L
Sbjct: 165 LLADVVLHPRL 175

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>MPPA_BLAEM (P97997) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 474

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 36/109 (33%), Positives = 61/109 (55%)
 Frame = +1

Query: 163 TKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQL 342
           T +T LP+G+++A+  S     +VGVYV+ G +YET    G +  +  LAF +T   ++ 
Sbjct: 15  TCMTRLPSGIRVATAPSNSHFAAVGVYVDAGPIYETSIDRGVSHFVSSLAFKSTHGATES 74

Query: 343 RVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           +V++ +  +GG+   +A RE + Y    L   +P  V++L D    PAL
Sbjct: 75  QVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPAL 123

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>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 525

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = +1

Query: 109 LPGVTIPP-PLADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLG 285
           LPGV  P     D  E  +TKVTTL NG+++AS+   G  C+VG+ +N GS YE     G
Sbjct: 48  LPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSG 107

Query: 286 ATQLLKKLAFTTT-RNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVL 462
               L+KLAF++T R  S+  ++  +   GG      +R+   Y+  A    +  +V +L
Sbjct: 108 IAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALL 167

Query: 463 VDCVRNPAL 489
            D V  P L
Sbjct: 168 ADVVLQPRL 176

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>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 525

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
 Frame = +1

Query: 109 LPGVTIPP-PLADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLG 285
           LPGV  P     D  E  +TKVTTL NG+++AS+   G  C+VG+ +N GS YE     G
Sbjct: 48  LPGVPKPVFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTVGILINSGSRYEAKYLSG 107

Query: 286 ATQLLKKLAFTTT-RNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVL 462
               L+KLAF++T R  S+  ++  +   GG      +R+   Y+  A    +  +V +L
Sbjct: 108 IAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLL 167

Query: 463 VDCVRNPAL 489
            D V  P L
Sbjct: 168 ADVVLQPRL 176

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>MPPA_RAT (P20069) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 524

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 46/131 (35%), Positives = 70/131 (53%), Gaps = 4/131 (3%)
 Frame = +1

Query: 109 LPGVTIPPPL---ADHVEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPET 279
           LPGV  P P+    D  E  +TKVTTL NG+++AS+   G  C++G+ +N GS YE    
Sbjct: 47  LPGV--PKPIFATVDGQEKFETKVTTLDNGLRVASQNKFGQFCTLGILINSGSRYEAKYL 104

Query: 280 LGATQLLKKLAFTTT-RNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVE 456
            G    L+KLAF++T R  S+  ++  +   GG      +R+   Y+  A    +  +V 
Sbjct: 105 SGIAHFLEKLAFSSTARFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVG 164

Query: 457 VLVDCVRNPAL 489
           +L D V +P L
Sbjct: 165 LLADVVLHPRL 175

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>MPPB_NEUCR (P11913) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
           (Ubiquinol-cytochrome-c reductase complex core protein
           I) (EC 1.10.2.2)
          Length = 476

 Score = 69.7 bits (169), Expect = 5e-12
 Identities = 41/111 (36%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSP-GSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRS 336
           KT+ TTL NG+ +AS+ SP   + +VG++++ GS  ET ET G    L+ LAF  T  R+
Sbjct: 39  KTQTTTLKNGLTVASQYSPYAQTSTVGMWIDAGSRAETDETNGTAHFLEHLAFKGTTKRT 98

Query: 337 QLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           Q ++  EI  +G       +RE   Y   AL   +P+ V++L D ++N  L
Sbjct: 99  QQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSKL 149

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>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 531

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 40/121 (33%), Positives = 69/121 (57%), Gaps = 4/121 (3%)
 Frame = +1

Query: 130 PPLADH---VEPGKTKVTTLPNGVKIASETS-PGSSCSVGVYVNCGSVYETPETLGATQL 297
           P LA H   +   +T+VTTLPNG+++A+E++    + +VGV+++ GS +E+ ET G    
Sbjct: 83  PILASHNHILSAPETRVTTLPNGLRVATESNLSAKTATVGVWIDAGSRFESDETNGTAHF 142

Query: 298 LKKLAFTTTRNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVR 477
           L+ + F  T  R+   +  EI  IGG      +RE  +Y    L + + + ++VL D ++
Sbjct: 143 LEHMIFKGTDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQ 202

Query: 478 N 480
           N
Sbjct: 203 N 203

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>UQCR2_MOUSE (Q9DB77) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 69.3 bits (168), Expect = 6e-12
 Identities = 36/112 (32%), Positives = 62/112 (55%)
 Frame = +1

Query: 148 VEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTR 327
           ++P   + T LPNG+ IAS  +      +G++V  GS YE    LG + LL+  +  TT+
Sbjct: 33  LQPQDLEFTKLPNGLVIASLENYAPLSRIGLFVKAGSRYEDSNNLGTSHLLRLASSLTTK 92

Query: 328 NRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNP 483
             S  ++ R I A+GG   V+A RE M+Y+   +++ +  ++E L++    P
Sbjct: 93  GASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAP 144

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>UQCR2_HUMAN (P22695) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 37/111 (33%), Positives = 60/111 (54%)
 Frame = +1

Query: 151 EPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRN 330
           +P   + T LPNG+ IAS  +      +G+++  GS YE    LG T LL+  +  TT+ 
Sbjct: 34  QPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTHLLRLTSSLTTKG 93

Query: 331 RSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNP 483
            S  ++ R I A+GG   V+A RE M+Y+   L+  +  ++E L++    P
Sbjct: 94  ASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAP 144

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>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 35/110 (31%), Positives = 60/110 (54%)
 Frame = +1

Query: 154 PGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNR 333
           P   + T LPNG+ IAS  +   +  +G+++  GS YE    LG + LL+  +  TT+  
Sbjct: 35  PQDLEFTRLPNGLVIASLENYAPASRIGLFIKAGSRYENSNNLGTSHLLRLASSLTTKGA 94

Query: 334 SQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNP 483
           S  ++ R I A+GG   V++ RE M+Y+   L+  +  ++E L++    P
Sbjct: 95  SSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAP 144

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>UQCR2_RAT (P32551) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 452

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 35/112 (31%), Positives = 62/112 (55%)
 Frame = +1

Query: 148 VEPGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTR 327
           ++P + + T LPNG+ IAS  +      +G+++  GS YE    LG + LL+  +  TT+
Sbjct: 32  LQPQELEFTKLPNGLVIASLENYAPLSRIGLFIKAGSRYENYNYLGTSHLLRLASTLTTK 91

Query: 328 NRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNP 483
             S  ++ R I A+GG   V+A RE M+Y+   ++  +  ++E L++    P
Sbjct: 92  GASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAP 143

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>Y5738_STRCO (O86835) Hypothetical zinc protease SCO5738 (EC 3.4.99.-)|
          Length = 459

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
 Frame = +1

Query: 157 GKTKVTTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNR 333
           G  + TTLP G++I +ET P   S + G++ + GS  ETP   GAT  L+ L F  TR R
Sbjct: 33  GTVRRTTLPGGLRIVTETLPSVRSATFGIWAHVGSRDETPALNGATHYLEHLLFKGTRKR 92

Query: 334 SQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVD 468
           S L +   I A+GG       +E   Y    L T +P  ++V+ D
Sbjct: 93  SALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCD 137

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>MPPB_YEAST (P10507) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 462

 Score = 66.2 bits (160), Expect = 6e-11
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
 Frame = +1

Query: 154 PGKTKVTTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRN 330
           PG T+ + LPNG+ IA+E  P  SS +VG++V+ GS  E  +  G    L+ LAF  T+N
Sbjct: 24  PG-TRTSKLPNGLTIATEYIPNTSSATVGIFVDAGSRAENVKNNGTAHFLEHLAFKGTQN 82

Query: 331 RSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           RSQ  +  EI  IG       +RE   Y   +L+  +P+ V++L D +    L
Sbjct: 83  RSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSVL 135

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>UQCR1_EUGGR (P43264) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 494

 Score = 65.5 bits (158), Expect = 9e-11
 Identities = 35/106 (33%), Positives = 55/106 (51%)
 Frame = +1

Query: 163 TKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQL 342
           T    LPNG +IASE+  G +C+VGV+++ GS +ET +  G    L+ + F  T  RS+ 
Sbjct: 27  TLQNALPNGFRIASESKDGDTCTVGVWIDAGSRWETEKNNGVAHFLEHMNFKGTGKRSRQ 86

Query: 343 RVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
            +   +  +G       +RE   Y     K  +PE V++L D + N
Sbjct: 87  DIEFGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLN 132

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>MPPB_SCHPO (Q9P7X1) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP) (PEP)
          Length = 457

 Score = 63.9 bits (154), Expect = 3e-10
 Identities = 41/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSP-GSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRS 336
           KT+ TTL NG+ +A+E  P   + +V V V+ GS  ET +  GA   L+ LAF  T+NRS
Sbjct: 21  KTETTTLKNGLTVATEHHPYAQTATVLVGVDAGSRAETAKNNGAAHFLEHLAFKGTKNRS 80

Query: 337 QLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           Q  +  E    G       +RE   Y   A K  +P  V VL D + N ++
Sbjct: 81  QKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSSI 131

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>MPPA_YEAST (P11914) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 482

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 29/108 (26%), Positives = 63/108 (58%)
 Frame = +1

Query: 166 KVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLR 345
           K+++L NG+K+A+  +PG   ++G+Y++ GS +E     G T +L +LAF +T +     
Sbjct: 20  KLSSLANGLKVATSNTPGHFSALGLYIDAGSRFEGRNLKGCTHILDRLAFKSTEHVEGRA 79

Query: 346 VVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
           +   +  +GG+ + +++RE + Y        + +M++++ + VR P +
Sbjct: 80  MAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPKI 127

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>MPPB_LENED (Q9Y8B5) Mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 466

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
 Frame = +1

Query: 163 TKVTTLPNGVKIASETSP-GSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           T+++TL NG+ +A+E+ P   + +VGV+++ GS  ET +T G    L+ +AF  T  RSQ
Sbjct: 29  TEISTLSNGLTVATESQPHAQTATVGVWIDAGSRAETDKTNGTAHFLEHMAFKGTGRRSQ 88

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             +  E+  IG       +RE   Y   +    +P  V+++ D ++N  L
Sbjct: 89  HALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSKL 138

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>Y2805_MYCBO (P0A5S9) Hypothetical zinc protease Mb2805c (EC 3.4.99.-)|
          Length = 438

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 172 TTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRV 348
           TTLP G+++ +E  P   S SVGV+V  GS  E     GA   L+ L F +T  RS + +
Sbjct: 18  TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77

Query: 349 VREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
            + + A+GG       +E   Y    L + +P  V+++ D V N
Sbjct: 78  AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLN 121

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>Y2782_MYCTU (P0A5S8) Hypothetical zinc protease Rv2782c/MT2852 (EC 3.4.99.-)|
          Length = 438

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 172 TTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRV 348
           TTLP G+++ +E  P   S SVGV+V  GS  E     GA   L+ L F +T  RS + +
Sbjct: 18  TTLPGGLRVVTEFLPAVHSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTPTRSAVDI 77

Query: 349 VREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
            + + A+GG       +E   Y    L + +P  V+++ D V N
Sbjct: 78  AQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLN 121

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>Y855_MYCLE (O32965) Hypothetical zinc protease ML0855 (EC 3.4.99.-)|
          Length = 445

 Score = 56.2 bits (134), Expect = 6e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
 Frame = +1

Query: 172 TTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRV 348
           TTLP G+++ +E  P   S SVGV+V  GS  E     GA   L+ L F +T  R+ + +
Sbjct: 25  TTLPGGLRVVTEHLPAVRSASVGVWVGVGSRDEGATVAGAAHFLEHLLFKSTSTRTAMDI 84

Query: 349 VREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
            + I A+GG       +E   Y    L + +   V+++ D V N
Sbjct: 85  AQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLN 128

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>YMXG_BACSU (Q04805) Hypothetical zinc protease ymxG (EC 3.4.99.-) (ORFP)|
          Length = 409

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
 Frame = +1

Query: 175 TLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVV 351
           T PNGV+I  E +P   S ++GV++  GS +ETPE  G +  L+ + F  T  +S   + 
Sbjct: 6   TCPNGVRIVLENNPTVRSVAIGVWIGTGSRHETPEINGISHFLEHMFFKGTSTKSAREIA 65

Query: 352 REIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVD 468
                IGG      ++E   Y    L  +    ++VL D
Sbjct: 66  ESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLAD 104

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>YMT1_CAEEL (P98080) Hypothetical protein F56D2.1 in chromosome III|
          Length = 471

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 30/110 (27%), Positives = 56/110 (50%)
 Frame = +1

Query: 160 KTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQ 339
           + +VTTL NG ++ +E +  ++ +VGV++  GS +E  +  G    L++L    T  R+ 
Sbjct: 37  QAEVTTLKNGFRVVTEDNGSATATVGVWIETGSRFENEKNNGVAHFLERLIHKGTGKRAS 96

Query: 340 LRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
             +  E+ AIG        R+  +    A    + ++V++L D +RN  L
Sbjct: 97  AALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSKL 146

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>MPPA_SCHPO (O94745) Probable mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 494

 Score = 55.8 bits (133), Expect = 7e-08
 Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
 Frame = +1

Query: 151 EPGKTKVTT--LPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTT 324
           +P   +V T  L NGV    +  PG    +GVYV  GS YET +  G +  + +LAF  T
Sbjct: 40  DPALNEVRTEKLKNGVTYVCDPRPGHFSGLGVYVKAGSRYETKKFSGVSHFMDRLAFQAT 99

Query: 325 RNRSQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPAL 489
                  +  ++  +GG+   S +RE M Y        +  M ++L + V  P +
Sbjct: 100 ERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPKI 154

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>UQCR2_SCHPO (P78761) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 426

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 33/96 (34%), Positives = 49/96 (51%)
 Frame = +1

Query: 187 GVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGA 366
           GV  A   +P ++ S+ V +N GS Y+ P+  G + LL+K AF TT  RS LR+ RE   
Sbjct: 30  GVSFAGRETPTATGSLSVVINAGSRYQ-PDA-GVSHLLEKFAFKTTEERSALRITRESEL 87

Query: 367 IGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCV 474
           +GG       RE +  +   L  Y+     +L + V
Sbjct: 88  LGGQLSTQITREHIILTARFLNEYLEYYARLLAEVV 123

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>UQCR2_ASHGO (Q75CW5) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 366

 Score = 48.9 bits (115), Expect = 9e-06
 Identities = 31/97 (31%), Positives = 48/97 (49%)
 Frame = +1

Query: 190 VKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAI 369
           + + ++   G   ++ V V  GS Y T +  G   LL +  F  T N+S LR+VRE   +
Sbjct: 16  LSVTAKDGSGKVSTLSVQVQGGSRYATKD--GVAHLLSRFNFHNTGNKSALRLVRESELL 73

Query: 370 GGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
           GG  + + +RE ++ S   LK  +P  V  L D   N
Sbjct: 74  GGRFQSTVDREHITLSATFLKEDLPYFVNALADVQYN 110

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>UQCR2_YEAST (P07257) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 368

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 30/97 (30%), Positives = 49/97 (50%)
 Frame = +1

Query: 196 IASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGG 375
           +++  +P    ++ V V+ GS Y T +  G   LL +  F  T  RS L++VRE   +GG
Sbjct: 19  VSARDAPTKISTLAVKVHGGSRYATKD--GVAHLLNRFNFQNTNTRSALKLVRESELLGG 76

Query: 376 SAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRNPA 486
           + K + +RE ++     LK  +P  V  L D +   A
Sbjct: 77  TFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTA 113

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>UQCR2_NEUCR (O60044) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 454

 Score = 48.1 bits (113), Expect = 2e-05
 Identities = 31/107 (28%), Positives = 48/107 (44%)
 Frame = +1

Query: 154 PGKTKVTTLPNGVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNR 333
           P  +   T   GVK+AS    G +  + V    G+ YE     G T  L++ AF  T  R
Sbjct: 35  PAASYEPTTIAGVKVASRDDSGPTTRLAVVAKAGTRYEPLP--GLTVGLEEFAFKNTNKR 92

Query: 334 SQLRVVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCV 474
           + LR+ RE   +GG  +    RE +      L+  +P   E+L + +
Sbjct: 93  TALRITRESELLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVI 139

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>UQCR2_CANGA (Q6FSJ3) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 364

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 29/89 (32%), Positives = 44/89 (49%)
 Frame = +1

Query: 196 IASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGG 375
           I ++  PG+   + V V+ GS Y   +  G   LL +  F  T  +S LR+VRE   +GG
Sbjct: 17  IVTKDLPGNLSVLRVKVHAGSRYANKD--GIAHLLSRFNFQNTNTKSALRLVRESELLGG 74

Query: 376 SAKVSANRELMSYSYGALKTYMPEMVEVL 462
             K + +RE ++     LK  +P  V  L
Sbjct: 75  CTKSTVDREYITLEARFLKENLPYYVNAL 103

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>UQCR2_KLULA (Q6CWJ6) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 360

 Score = 45.8 bits (107), Expect = 8e-05
 Identities = 30/89 (33%), Positives = 45/89 (50%)
 Frame = +1

Query: 196 IASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGG 375
           I+++   G   ++ V V+ GS Y   E  G   LL +  F  T N+S LR+VRE   +GG
Sbjct: 18  ISAKDGSGKLSTLAVKVHGGSRYADKE--GIAHLLSRFNFHNTGNKSALRLVRESELLGG 75

Query: 376 SAKVSANRELMSYSYGALKTYMPEMVEVL 462
             + S +RE ++     LK  +P  V  L
Sbjct: 76  KFESSVDREYITLKATFLKEDLPYFVNAL 104

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>UQCR2_YARLI (Q6C2E3) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 417

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 29/97 (29%), Positives = 45/97 (46%)
 Frame = +1

Query: 187 GVKIASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGA 366
           GVK+A++        + V +  GS Y T    G + +L+K AF  T  +S LR VRE+  
Sbjct: 22  GVKVAAQDGQSPISDLSVVLRGGSRYATVP--GVSHILEKFAFQNTVPKSALRFVRELEL 79

Query: 367 IGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVR 477
            GG       RE +      LK  +P  V+   + ++
Sbjct: 80  FGGKLYTHTTREHIVLRTQFLKQDLPYFVDAFANVLK 116

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>Y293_RICCN (Q92IX7) Hypothetical zinc protease RC0293 (EC 3.4.99.-)|
          Length = 412

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +1

Query: 169 VTTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLR 345
           V+ L NG+ I +   P  +S ++ +    G+ YE  E  G +  L+ +AF  T+ R+  +
Sbjct: 7   VSKLKNGLTILTYNMPYVNSVAINLIAKVGARYENAEEDGISHFLEHMAFKGTKTRTAKQ 66

Query: 346 VVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
           +     AIGG        E   Y    L     + + +L D ++N
Sbjct: 67  IAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQN 111

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>Y219_RICPR (O05945) Hypothetical zinc protease RP219 (EC 3.4.99.-)|
          Length = 412

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
 Frame = +1

Query: 169 VTTLPNGVKIASETSPG-SSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLR 345
           V+ L NG+ I +   P   S ++ +    G+ YE  E  G +  L+ +AF  T+ R+  +
Sbjct: 7   VSKLKNGLTILTYNMPYVHSVAINLIAKVGARYENEEEEGISHFLEHMAFKGTKTRTAQQ 66

Query: 346 VVREIGAIGGSAKVSANRELMSYSYGALKTYMPEMVEVLVDCVRN 480
           +  E  +IGG        E   Y    L     + + +L D ++N
Sbjct: 67  IAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQN 111

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>UQCR1_YEAST (P07256) Ubiquinol-cytochrome-c reductase complex core protein I,|
           mitochondrial precursor (EC 1.10.2.2)
          Length = 457

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +1

Query: 136 LADHVEPGKTKVTTLPNGVKIASETSPGS-SCSVGVYVNCGSVYETPETLGATQLLKKL 309
           LA  V   K +VT L NG+ +A+E +P + + SVGV    G+  E P   G + L K +
Sbjct: 18  LATAVATPKAEVTQLSNGIVVATEHNPSAHTASVGVVFGSGAANENPYNNGVSNLWKNI 76

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>PQQL_HAEIN (P45181) Probable zinc protease pqqL (EC 3.4.99.-)|
          Length = 926

 Score = 32.3 bits (72), Expect = 0.88
 Identities = 17/82 (20%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
 Frame = +1

Query: 133 PLADHVEPGKTKVTTLPNGVK--IASETSPGSSCSVGVYVNCGSVYETPETLGATQLLKK 306
           P   +++ GK     L NG++  +   T P     + + +N GS++E  +  G   L++ 
Sbjct: 29  PFDPNIQHGK-----LSNGLQYFVLKNTEPKERVYIRLVINAGSMHEDDDQKGIAHLVEH 83

Query: 307 LAFTTTRNRSQLRVVREIGAIG 372
           +AF  ++   + +++  +  +G
Sbjct: 84  MAFNGSKKYPENQIINALEKLG 105

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>MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)|
          Length = 74

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
 Frame = +1

Query: 211 SPGSSCSVGVYVNCGSVY-ETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGGSAKV 387
           S GSSC  G   NCG +Y +  E  GAT  +  +       + Q     E G        
Sbjct: 4   SCGSSCGCGSNCNCGKMYPDLEEKSGATMQVTVIVLGVGSAKVQFEEAAEFGEAAHGCSC 63

Query: 388 SAN 396
            AN
Sbjct: 64  GAN 66

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>SMP1L_MOUSE (Q7TN29) Stromal membrane-associated protein 1-like (Stromal|
           membrane-associated protein 2)
          Length = 428

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
 Frame = +1

Query: 79  QMHYPLQXFALPGVT---------IPPPLADHVEPGKTKVTT---LPNGVKIASETS--- 213
           QM YP    + PGVT         +PPP+    +PG + + T   +P G     + S   
Sbjct: 289 QMAYPTAYPSFPGVTPPNSIMGGMVPPPVGMVAQPGASGMLTPMAMPAGYMGGMQASMMG 348

Query: 214 -PGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIG 372
            P    +        S+   P+T+   Q  ++L +  T+   Q+  +   GA G
Sbjct: 349 VPNGMMTTQQAGYMASMAAMPQTVYGVQPAQQLQWNLTQMTQQMAGMNFYGANG 402

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>PESC_BRARE (P79741) Pescadillo|
          Length = 582

 Score = 30.4 bits (67), Expect = 3.3
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
 Frame = +1

Query: 22  QVLHXSHQAASWAG*QVHVQMHYPLQXFALPGVTIPPPLA--------DHVEPGKTKVTT 177
           Q ++  +    W    V+ ++  P++ + L GVT+PP L+        D+V P K K+  
Sbjct: 387 QYINRYYIQPQWVYDSVNAKIQLPVEEYFL-GVTLPPHLSPFVEETEGDYVPPEKLKLMA 445

Query: 178 LPNGVKIASE 207
           L  G K  +E
Sbjct: 446 LQRGEKPQAE 455

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>ADO3_ARATH (Q9C9W9) Adagio protein 3 (Flavin-binding kelch repeat F-box|
           protein 1) (F-box only protein 2a) (FBX2a)
          Length = 619

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = +1

Query: 94  LQXFALPGVTIPPPLADHVEPGKTKVTTLPNGVKIASETSP 216
           L+  A PGV +PPP  DHV         +  G  IA   SP
Sbjct: 509 LECSAFPGVVVPPPRLDHVAVSMPCGRVIIFGGSIAGLHSP 549

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>ECM33_YEAST (P38248) Extracellular matrix protein 33 precursor|
          Length = 469

 Score = 28.9 bits (63), Expect = 9.7
 Identities = 20/77 (25%), Positives = 35/77 (45%)
 Frame = +1

Query: 202 SETSPGSSCSVGVYVNCGSVYETPETLGATQLLKKLAFTTTRNRSQLRVVREIGAIGGSA 381
           S TS  SSCS+G      +  +  +  G + ++  L  T     + L  ++E   I GS 
Sbjct: 23  STTSIPSSCSIGTSATATAQADLDKISGCSTIVGNLTITGDLGSAALASIQE---IDGSL 79

Query: 382 KVSANRELMSYSYGALK 432
            +  +  L S+S  ++K
Sbjct: 80  TIFNSSSLSSFSADSIK 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,058,252
Number of Sequences: 219361
Number of extensions: 1598794
Number of successful extensions: 3962
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 3849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4315578075
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result