ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8p05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X82830.1|HVCIIIO H.vulgare mRNA for coproporphyrinogen oxidase Length = 1456 Score = 1009 bits (509), Expect = 0.0 Identities = 560/572 (97%), Gaps = 4/572 (0%) Strand = Plus / Plus Query: 1 gccgggtgctccaggnacgggnaacgtgttcgagtaggccggggtgaacgtgtccgtcgt 60 ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||| || Sbjct: 426 gccgggtgctccagg-acggg-aacgtgttcgagaaggccggggtgaacgtgtccgctgt 483 Query: 61 gtacggggtcatgcccccggnc-gcctaccgcgccgccaagggggctgcgaagaacgggg 119 | |||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 484 gatcggggt-atgcccccggtccgcctaccgcgccgccaagggggctgcgaagaacgggg 542 Query: 120 cagcggacgggcacaaggctgggcccgtgcccttctttgccgctggcatcagctcggttc 179 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 543 cagcggacgggcacaaggctgggcccgtgcccttcttttccgctggcatcagctcggttc 602 Query: 180 ttcatcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacag 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ttcatcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacag 662 Query: 240 atgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggaggtggtactgatt 299 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 663 atgcaccaaaagatgtgcctggtgcgccaagatcatggtggtttggaggtggtactgatt 722 Query: 300 tgactccttcctatctcattgaagaggatgtgaagcattttcattctgttcaaaaacaaa 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tgactccttcctatctcattgaagaggatgtgaagcattttcattctgttcaaaaacaaa 782 Query: 360 cttgtgataagttcgatccaagtttttacccaagattcaaaaaatggtgcgatgattatt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 783 cttgtgataagttcgatccaagtttttacccaagattcaaaaaatggtgcgatgattatt 842 Query: 420 tctatattaagcatcgtaatgagagacgtgggcttggcggaatattttttgatgatctta 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 tctatattaagcatcgtaatgagagacgtgggcttggcggaatattttttgatgatctta 902 Query: 480 atgattatgaccaagacatgcttctgaactttgccacagaatgtgccggttctgtaattc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 903 atgattatgaccaagacatgcttctgaactttgccacagaatgtgccggttctgtaattc 962 Query: 540 ctgcatacatacccatcatagaacgccgcaaa 571 |||||||||||||||||||||||||||||||| Sbjct: 963 ctgcatacatacccatcatagaacgccgcaaa 994
>gb|AY224543.1| Oryza sativa (japonica cultivar-group) isolate 23485 coproporphyrinogen III oxidase mRNA, partial cds Length = 975 Score = 622 bits (314), Expect = e-175 Identities = 491/549 (89%), Gaps = 6/549 (1%) Strand = Plus / Plus Query: 25 cgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgc 84 |||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| | ||| Sbjct: 177 cgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgc 236 Query: 85 ctaccgcgccgccaagggg---gctgcgaagaacggggcagcgg---acgggcacaaggc 138 |||||||||||||||||| || | |||||||| || |||| | || | |||||| Sbjct: 237 gtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggc 296 Query: 139 tgggcccgtgcccttctttgccgctggcatcagctcggttcttcatcccaagaatccgtt 198 |||||||||||||||||||||||||||||| |||||||||||||| |||||||| || || Sbjct: 297 tgggcccgtgcccttctttgccgctggcattagctcggttcttcaccccaagaacccatt 356 Query: 199 tgctccaacattgcatttcaactatcgctattttgaaacagatgcaccaaaagatgtgcc 258 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| || Sbjct: 357 tgctccaacattgcattttaactaccgctattttgagacagatgcaccgaaagatgctcc 416 Query: 259 tggtgcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctcat 318 |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 417 tggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatcat 476 Query: 319 tgaagaggatgtgaagcattttcattctgttcaaaaacaaacttgtgataagttcgatcc 378 |||||||||||||||||||||||||||||||||||||||| | ||||||||||| || || Sbjct: 477 tgaagaggatgtgaagcattttcattctgttcaaaaacaagcgtgtgataagtttgaccc 536 Query: 379 aagtttttacccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaa 438 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 537 aagtttttacccgagattcaaaaaatggtgtgatgattatttctatattaagcaccgtaa 596 Query: 439 tgagagacgtgggcttggcggaatattttttgatgatcttaatgattatgaccaagacat 498 |||| | || |||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 597 tgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatgatcaagaaat 656 Query: 499 gcttctgaactttgccacagaatgtgccggttctgtaattcctgcatacatacccatcat 558 |||||| |||||||| ||||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 657 gcttctcaactttgctacagaatgtgcggattctgttgttcctgcatacataccaatcat 716 Query: 559 agaacgccg 567 |||||||| Sbjct: 717 tgaacgccg 725
>ref|XM_473852.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1200 Score = 615 bits (310), Expect = e-173 Identities = 490/549 (89%), Gaps = 6/549 (1%) Strand = Plus / Plus Query: 25 cgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgc 84 |||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| | ||| Sbjct: 402 cgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgc 461 Query: 85 ctaccgcgccgccaagggg---gctgcgaagaacggggcagcgg---acgggcacaaggc 138 |||||||||||||||||| || | |||||||| || |||| | || | |||||| Sbjct: 462 gtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggc 521 Query: 139 tgggcccgtgcccttctttgccgctggcatcagctcggttcttcatcccaagaatccgtt 198 |||||||||||||||||||||||||||||| |||||||||||||| |||||||| || || Sbjct: 522 tgggcccgtgcccttctttgccgctggcattagctcggttcttcaccccaagaacccatt 581 Query: 199 tgctccaacattgcatttcaactatcgctattttgaaacagatgcaccaaaagatgtgcc 258 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| || Sbjct: 582 tgctccaacattgcattttaactaccgctattttgagacagatgcaccgaaagatgctcc 641 Query: 259 tggtgcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctcat 318 |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 642 tggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatcat 701 Query: 319 tgaagaggatgtgaagcattttcattctgttcaaaaacaaacttgtgataagttcgatcc 378 ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| || || Sbjct: 702 tgaagaggatgtgaagcatttccattctgttcaaaaacaagcgtgtgataagtttgaccc 761 Query: 379 aagtttttacccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaa 438 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 762 aagtttttacccgagattcaaaaaatggtgtgatgattatttctatattaagcaccgtaa 821 Query: 439 tgagagacgtgggcttggcggaatattttttgatgatcttaatgattatgaccaagacat 498 |||| | || |||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 822 tgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatgatcaagaaat 881 Query: 499 gcttctgaactttgccacagaatgtgccggttctgtaattcctgcatacatacccatcat 558 |||||| |||||||| ||||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 882 gcttctcaactttgctacagaatgtgcggattctgttgttcctgcatacataccaatcat 941 Query: 559 agaacgccg 567 |||||||| Sbjct: 942 tgaacgccg 950
>dbj|AK070391.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050L08, full insert sequence Length = 1164 Score = 615 bits (310), Expect = e-173 Identities = 490/549 (89%), Gaps = 6/549 (1%) Strand = Plus / Plus Query: 25 cgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgc 84 |||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| | ||| Sbjct: 138 cgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgc 197 Query: 85 ctaccgcgccgccaagggg---gctgcgaagaacggggcagcgg---acgggcacaaggc 138 |||||||||||||||||| || | |||||||| || |||| | || | |||||| Sbjct: 198 gtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggc 257 Query: 139 tgggcccgtgcccttctttgccgctggcatcagctcggttcttcatcccaagaatccgtt 198 |||||||||||||||||||||||||||||| |||||||||||||| |||||||| || || Sbjct: 258 tgggcccgtgcccttctttgccgctggcattagctcggttcttcaccccaagaacccatt 317 Query: 199 tgctccaacattgcatttcaactatcgctattttgaaacagatgcaccaaaagatgtgcc 258 |||||||||||||||||| ||||| ||||||||||| ||||||||||| ||||||| || Sbjct: 318 tgctccaacattgcattttaactaccgctattttgagacagatgcaccgaaagatgctcc 377 Query: 259 tggtgcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctcat 318 |||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 378 tggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatcat 437 Query: 319 tgaagaggatgtgaagcattttcattctgttcaaaaacaaacttgtgataagttcgatcc 378 ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| || || Sbjct: 438 tgaagaggatgtgaagcatttccattctgttcaaaaacaagcgtgtgataagtttgaccc 497 Query: 379 aagtttttacccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaa 438 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 498 aagtttttacccgagattcaaaaaatggtgtgatgattatttctatattaagcaccgtaa 557 Query: 439 tgagagacgtgggcttggcggaatattttttgatgatcttaatgattatgaccaagacat 498 |||| | || |||||||| |||||||||||||||||||||||||| ||||| ||||| || Sbjct: 558 tgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatgatcaagaaat 617 Query: 499 gcttctgaactttgccacagaatgtgccggttctgtaattcctgcatacatacccatcat 558 |||||| |||||||| ||||||||||| | |||||| |||||||||||||||| ||||| Sbjct: 618 gcttctcaactttgctacagaatgtgcggattctgttgttcctgcatacataccaatcat 677 Query: 559 agaacgccg 567 |||||||| Sbjct: 678 tgaacgccg 686
>gb|DQ250641.1| Zea mays coproporphyrinogen III oxidase (cpx2) mRNA, complete cds Length = 1444 Score = 482 bits (243), Expect = e-133 Identities = 468/542 (86%), Gaps = 6/542 (1%) Strand = Plus / Plus Query: 29 ttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgcctac 88 |||||| |||||||||| ||||| |||||||| |||||||||||||| || | ||||||| Sbjct: 478 ttcgagaaggccggggtcaacgtctccgtcgtctacggggtcatgccacccgacgcctac 537 Query: 89 cgcgccgccaagggggctgcg---aagaacggggcagc---ggacgggcacaaggctggg 142 |||||||||||||||| || ||||||| ||| || ||| || |||||| |||| Sbjct: 538 cgcgccgccaagggggaggccggcaagaacgaggccgccgcggatggccacaagcctggt 597 Query: 143 cccgtgcccttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgct 202 |||||||| ||||| ||||| || || |||||||| ||||| ||||| ||||| |||||| Sbjct: 598 cccgtgccattcttcgccgcgggtattagctcggtgcttcaccccaaaaatccatttgct 657 Query: 203 ccaacattgcatttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggt 262 |||||||||||||| ||||| || || ||||| ||||||||||| ||||||| |||||| Sbjct: 658 ccaacattgcattttaactaccgttactttgagacagatgcacccaaagatgcacctggt 717 Query: 263 gcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctcattgaa 322 ||||||||| ||||||||| || ||||||||||| |||||||| || || |||||||| Sbjct: 718 gcaccaagacaatggtggttcggcggtggtactgacttgactccctcatacatcattgaa 777 Query: 323 gaggatgtgaagcattttcattctgttcaaaaacaaacttgtgataagttcgatccaagt 382 ||||| |||||||||||||||||||||||||| ||| | |||||||| || ||||||||| Sbjct: 778 gaggacgtgaagcattttcattctgttcaaaagcaagcatgtgataaatttgatccaagt 837 Query: 383 ttttacccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgag 442 ||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct: 838 tttcacccaagattcaaaaaatggtgtgatgattatttctatattaagcaccgtaacgag 897 Query: 443 agacgtgggcttggcggaatattttttgatgatcttaatgattatgaccaagacatgctt 502 | ||||||||||| ||||||||||||||||| ||||||||||| || ||||| |||||| Sbjct: 898 cggcgtgggcttggtggaatattttttgatgaccttaatgattacgatcaagaaatgctt 957 Query: 503 ctgaactttgccacagaatgtgccggttctgtaattcctgcatacatacccatcatagaa 562 || ||||| || ||||||||||| | |||||| ||||||| |||||||| ||||||||| Sbjct: 958 ctcaacttcgctacagaatgtgcggactctgtacttcctgcctacataccgatcatagaa 1017 Query: 563 cg 564 || Sbjct: 1018 cg 1019
>gb|AY107747.1| Zea mays PCO087466 mRNA sequence Length = 1036 Score = 456 bits (230), Expect = e-125 Identities = 455/529 (86%), Gaps = 6/529 (1%) Strand = Plus / Plus Query: 42 gggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgcctaccgcgccgccaagg 101 |||| ||||| |||||||| |||||||||||||| || | |||||||||||||||||||| Sbjct: 7 gggtcaacgtctccgtcgtctacggggtcatgccacccgacgcctaccgcgccgccaagg 66 Query: 102 gggctgcg---aagaacgggg---cagcggacgggcacaaggctgggcccgtgcccttct 155 ||| || ||||||| || | ||||| || |||||| |||| |||||||| |||| Sbjct: 67 gggaggccggcaagaacgaggtcgccgcggatggccacaagcctggccccgtgccattct 126 Query: 156 ttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattgcatt 215 | || || || || |||||||| ||||| ||||| ||||| ||||||||||||||||||| Sbjct: 127 tcgctgcgggtattagctcggtgcttcaccccaaaaatccatttgctccaacattgcatt 186 Query: 216 tcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcat 275 | ||||| || || ||||| ||||||||||| ||||||| ||||||||||||||| | Sbjct: 187 ttaactaccgttactttgagacagatgcacccaaagatgcacctggtgcaccaagacagt 246 Query: 276 ggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtgaagc 335 |||||||||| ||||||||||| |||||||| || || ||||||||||||| ||||||| Sbjct: 247 ggtggtttggcggtggtactgacttgactccctcatacatcattgaagaggacgtgaagc 306 Query: 336 attttcattctgttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagat 395 ||||||||||||||||||| ||| | |||||||| || |||||||||||| ||||||||| Sbjct: 307 attttcattctgttcaaaagcaagcatgtgataaatttgatccaagttttcacccaagat 366 Query: 396 tcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgtgggcttg 455 ||||||||||||| ||||||||||||||||||||||| ||||| ||| | |||||||||| Sbjct: 367 tcaaaaaatggtgtgatgattatttctatattaagcaccgtaacgagcggcgtgggcttg 426 Query: 456 gcggaatattttttgatgatcttaatgattatgaccaagacatgcttctgaactttgcca 515 | ||||||||||||||||| ||||||||||| || ||||| |||||||| ||||| || | Sbjct: 427 gtggaatattttttgatgaccttaatgattacgatcaagaaatgcttctcaacttcgcta 486 Query: 516 cagaatgtgccggttctgtaattcctgcatacatacccatcatagaacg 564 |||||||||| | |||||| ||||||| |||||||| ||||||||||| Sbjct: 487 cagaatgtgcggactctgtacttcctgcgtacataccgatcatagaacg 535
>gb|DQ250640.1| Zea mays plastid coproporphyrinogen III oxidase (cpx1) mRNA, complete cds; nuclear gene for plastid product Length = 1645 Score = 404 bits (204), Expect = e-109 Identities = 345/392 (88%) Strand = Plus / Plus Query: 173 tcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgctatttt 232 ||||| ||||| |||||||| || |||||||||||||||||||| ||||| || || ||| Sbjct: 796 tcggtgcttcaccccaagaacccatttgctccaacattgcattttaactaccgttacttt 855 Query: 233 gaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggaggtggt 292 || || ||||||||||||| || ||||||||||||||| ||||||||| || |||||| Sbjct: 856 gagacggatgcaccaaaaggtgcacctggtgcaccaagacaatggtggttcggcggtggt 915 Query: 293 actgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctgttcaa 352 ||||| ||||||||||| || ||||||||||||| ||||||||||| |||||||||||| Sbjct: 916 actgacttgactccttcatacatcattgaagaggacgtgaagcatttccattctgttcaa 975 Query: 353 aaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggtgcgat 412 || ||| | |||||||| || |||||||||||| |||||||||||||||||||||| ||| Sbjct: 976 aagcaagcatgtgataaatttgatccaagttttcacccaagattcaaaaaatggtgtgat 1035 Query: 413 gattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatattttttgat 472 |||||||||||||||||||| ||||||||| | |||||||| || ||||||||||||||| Sbjct: 1036 gattatttctatattaagcaccgtaatgagcggcgtgggctaggtggaatattttttgat 1095 Query: 473 gatcttaatgattatgaccaagacatgcttctgaactttgccacagaatgtgccggttct 532 || ||||||||||| || ||||| |||||||| |||||||| ||||||||||| | ||| Sbjct: 1096 gaccttaatgattacgatcaagaaatgcttctcaactttgctacagaatgtgcggactct 1155 Query: 533 gtaattcctgcatacatacccatcatagaacg 564 ||| ||||||| |||||||| ||||||||||| Sbjct: 1156 gtacttcctgcgtacataccgatcatagaacg 1187 Score = 73.8 bits (37), Expect = 6e-10 Identities = 66/76 (86%) Strand = Plus / Plus Query: 29 ttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgcctac 88 |||||| |||||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 643 ttcgagaaggccggggtcaacgtctccgtcgtctacggggtcattccgcccgacgcctac 702 Query: 89 cgcgccgccaaggggg 104 |||| || |||||||| Sbjct: 703 cgcgacggcaaggggg 718
>ref|NM_100230.3| Arabidopsis thaliana LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase AT1G03475 (LIN2) mRNA, complete cds Length = 1449 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 554 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 613 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 614 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 673 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 674 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 733 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 734 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 793 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 794 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 853 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 854 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 908
>gb|AY113166.1| Arabidopsis thaliana At1g03480/F21B7_24 mRNA, complete cds Length = 903 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 260 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 319 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 320 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 379 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 380 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 439 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 440 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 499 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 500 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 559 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 560 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 614
>gb|AF375424.1| Arabidopsis thaliana At1g03480/F21B7_24 mRNA, complete cds Length = 1183 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 288 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 347 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 348 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 407 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 408 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 467 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 468 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 527 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 528 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 587 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 588 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 642
>emb|BX817034.1|CNS0AD9D Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZH06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 554 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 613 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 614 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 673 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 674 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 733 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 734 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 793 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 794 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 853 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 854 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 908
>emb|BX814877.1|CNS0AD06 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS15ZC07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1393 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 530 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 589 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 590 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 649 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 650 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 709 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 710 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 769 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 770 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 829 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 830 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 884
>emb|BX815516.1|CNS0ACXE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZE11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1292 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 476 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 535 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 536 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 595 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 596 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 655 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 656 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 715 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 716 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 775 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 776 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 830
>emb|AJ420796.1|ATH420796 Arabidopsis thaliana mRNA for coproporphyrinogen III oxidase (hemF gene) Length = 1161 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 518 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 577 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 578 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 637 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 638 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 697 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 698 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 757 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 758 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 817 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 818 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 872
>dbj|AB044394.1| Arabidopsis thaliana LIN2 mRNA for coproporphyrinogen III oxidase, complete cds Length = 1410 Score = 165 bits (83), Expect = 2e-37 Identities = 287/355 (80%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 518 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 577 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 578 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 637 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 638 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 697 Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||| ||| | ||||| || || || || || || || ||||||| || |||| Sbjct: 698 ttcaaaagcaagcctgtgacaaatttgacccttccttctatccccgattcaagaagtggt 757 Query: 408 gcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaatatttt 467 | ||||| || || || || ||||| ||| |||||||||| || ||||| || ||||||| Sbjct: 758 gtgatgactacttttacatcaagcaccgtgatgagagacgaggacttggagggatatttt 817 Query: 468 ttgatgatcttaatgattatgaccaagacatgcttctgaactttgccacagaatg 522 |||||||||||||||| ||||| || || ||||||||| |||||||| ||||| Sbjct: 818 ttgatgatcttaatgactatgatcaggaaatgcttctgtcatttgccactgaatg 872
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 257 cctggtgcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctc 316 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || Sbjct: 94871 cctggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatc 94930 Query: 317 attgaagaggatgtgaagcattttcattctgt 348 ||||||||||||||||||||||| |||||||| Sbjct: 94931 attgaagaggatgtgaagcatttccattctgt 94962 Score = 135 bits (68), Expect = 2e-28 Identities = 137/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 25 cgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgc 84 |||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| | ||| Sbjct: 93446 cgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgc 93505 Query: 85 ctaccgcgccgccaagggg---gctgcgaagaacggggcagcgg---acgggcacaaggc 138 |||||||||||||||||| || | |||||||| || |||| | || | |||||| Sbjct: 93506 gtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggc 93565 Query: 139 tgggcccgtgcccttctttgccgctggcatcagctcggt 177 |||||||||||||||||||||||||||||| |||||||| Sbjct: 93566 tgggcccgtgcccttctttgccgctggcattagctcggt 93604 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 347 gttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatgg 406 |||||||||||| | ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 95102 gttcaaaaacaagcgtgtgataagtttgacccaagtttttacccgagattcaaaaaatgg 95161 Query: 407 tgcgatgattatttctatattaag 430 || ||||||||||||||||||||| Sbjct: 95162 tgtgatgattatttctatattaag 95185 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||||||||| | || |||||||| |||||||||||||||||||||||||| |||| Sbjct: 95465 agcaccgtaatgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatg 95524 Query: 489 accaagacatgcttctgaactttgccacag 518 | ||||| |||||||| |||||||| |||| Sbjct: 95525 atcaagaaatgcttctcaactttgctacag 95554 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 175 ggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgctattttga 234 ||||||||| |||||||| || |||||||||||||||||||| ||||| ||||||||||| Sbjct: 94426 ggttcttcaccccaagaacccatttgctccaacattgcattttaactaccgctattttga 94485 Query: 235 aacagatgcaccaaaag 251 ||||||||||| |||| Sbjct: 94486 gacagatgcaccgaaag 94502 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 515 acagaatgtgccggttctgtaattcctgcatacatacccatcatagaacgccg 567 ||||||||||| | |||||| |||||||||||||||| ||||| |||||||| Sbjct: 95854 acagaatgtgcggattctgttgttcctgcatacataccaatcattgaacgccg 95906
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 135 bits (68), Expect = 2e-28 Identities = 86/92 (93%) Strand = Plus / Plus Query: 257 cctggtgcaccaagatcatggtggtttggaggtggtactgatttgactccttcctatctc 316 |||||||||||||| |||||||||||||||||||||||||||||||||||| ||| || Sbjct: 30997498 cctggtgcaccaaggcaatggtggtttggaggtggtactgatttgactccttcatatatc 30997557 Query: 317 attgaagaggatgtgaagcattttcattctgt 348 ||||||||||||||||||||||| |||||||| Sbjct: 30997558 attgaagaggatgtgaagcatttccattctgt 30997589 Score = 135 bits (68), Expect = 2e-28 Identities = 137/159 (86%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 25 cgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggncgc 84 |||||||||| |||||||||| ||||| |||||||||||||| ||||||||||| | ||| Sbjct: 30996073 cgtgttcgagaaggccggggtcaacgtctccgtcgtgtacggcgtcatgccccccgacgc 30996132 Query: 85 ctaccgcgccgccaagggg---gctgcgaagaacggggcagcgg---acgggcacaaggc 138 |||||||||||||||||| || | |||||||| || |||| | || | |||||| Sbjct: 30996133 gtaccgcgccgccaagggggaggccggcaagaacggcgcggcggcagatggccccaaggc 30996192 Query: 139 tgggcccgtgcccttctttgccgctggcatcagctcggt 177 |||||||||||||||||||||||||||||| |||||||| Sbjct: 30996193 tgggcccgtgcccttctttgccgctggcattagctcggt 30996231 Score = 119 bits (60), Expect = 1e-23 Identities = 78/84 (92%) Strand = Plus / Plus Query: 347 gttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatgg 406 |||||||||||| | ||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 30997729 gttcaaaaacaagcgtgtgataagtttgacccaagtttttacccgagattcaaaaaatgg 30997788 Query: 407 tgcgatgattatttctatattaag 430 || ||||||||||||||||||||| Sbjct: 30997789 tgtgatgattatttctatattaag 30997812 Score = 99.6 bits (50), Expect = 1e-17 Identities = 80/90 (88%) Strand = Plus / Plus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||||||||| | || |||||||| |||||||||||||||||||||||||| |||| Sbjct: 30998092 agcaccgtaatgagcgtcgggggcttggtggaatattttttgatgatcttaatgactatg 30998151 Query: 489 accaagacatgcttctgaactttgccacag 518 | ||||| |||||||| |||||||| |||| Sbjct: 30998152 atcaagaaatgcttctcaactttgctacag 30998181 Score = 97.6 bits (49), Expect = 4e-17 Identities = 70/77 (90%) Strand = Plus / Plus Query: 175 ggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgctattttga 234 ||||||||| |||||||| || |||||||||||||||||||| ||||| ||||||||||| Sbjct: 30997053 ggttcttcaccccaagaacccatttgctccaacattgcattttaactaccgctattttga 30997112 Query: 235 aacagatgcaccaaaag 251 ||||||||||| |||| Sbjct: 30997113 gacagatgcaccgaaag 30997129 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 515 acagaatgtgccggttctgtaattcctgcatacatacccatcatagaacgccg 567 ||||||||||| | |||||| |||||||||||||||| ||||| |||||||| Sbjct: 30998481 acagaatgtgcggattctgttgttcctgcatacataccaatcattgaacgccg 30998533
>emb|BX816336.1|CNS0AD0S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH41ZH02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1371 Score = 125 bits (63), Expect = 2e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 525 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 584 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 585 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 644 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 645 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 704 Query: 348 ttcaaaa 354 ||||||| Sbjct: 705 ttcaaaa 711 Score = 91.7 bits (46), Expect = 2e-15 Identities = 109/130 (83%) Strand = Plus / Plus Query: 393 gattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgtgggc 452 ||||||| || ||||| ||||| || || || || ||||| ||| |||||||||| || | Sbjct: 750 gattcaagaagtggtgtgatgactacttttacatcaagcaccgtgatgagagacgaggac 809 Query: 453 ttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttctgaactttg 512 |||| || ||||||||||||||||||||||| ||||| || || ||||||||| | |||| Sbjct: 810 ttggagggatattttttgatgatcttaatgactatgatcaggaaatgcttctgtaatttg 869 Query: 513 ccacagaatg 522 |||| ||||| Sbjct: 870 ccactgaatg 879
>emb|BX816290.1|CNS0AD7M Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH39ZH08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 125 bits (63), Expect = 2e-25 Identities = 156/187 (83%) Strand = Plus / Plus Query: 168 tcagctcggttcttcatcccaagaatccgtttgctccaacattgcatttcaactatcgct 227 ||||||||||| | ||||||||||| || ||||| ||||| |||||||||| ||||||| Sbjct: 509 tcagctcggttttgcatcccaagaacccttttgccccaaccctgcatttcaattatcgct 568 Query: 228 attttgaaacagatgcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggag 287 |||| || |||||||| ||||| ||||| ||||| || ||||| |||||||||||| | Sbjct: 569 atttcgagacagatgctccaaaggatgttcctggagctccaaggcaatggtggtttggtg 628 Query: 288 gtggtactgatttgactccttcctatctcattgaagaggatgtgaagcattttcattctg 347 |||| |||||||| |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 629 gtggcactgatttcactcctgcttacatctttgaagaagatgtcaagcatttccattcga 688 Query: 348 ttcaaaa 354 ||||||| Sbjct: 689 ttcaaaa 695 Score = 77.8 bits (39), Expect = 4e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 428 aagcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattat 487 ||||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| ||| Sbjct: 770 aagcaccgtgatgagagacgaggacttggagggatattttttgatgatcttaatgactat 829 Query: 488 gaccaagacatgcttctgaactttgccacagaatg 522 || || || ||||||||| |||||||| ||||| Sbjct: 830 gatcaggaaatgcttctgtcatttgccactgaatg 864
>emb|AJ420797.1|ATH420797 Arabidopsis thaliana mRNA for coproporphyrinogen III oxidase (hemF gene) Length = 1160 Score = 123 bits (62), Expect = 7e-25 Identities = 281/354 (79%) Strand = Plus / Plus Query: 152 ttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattg 211 |||||||||||||| | |||||||||| | ||||| ||||| || |||||||| || || Sbjct: 501 ttctttgccgctggaaccagctcggttttgcatcctaagaacccttttgctccgactctg 560 Query: 212 catttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggtgcaccaaga 271 |||||||| || |||||||| || || ||||| ||||| ||||| ||||| || || || Sbjct: 561 catttcaattaccgctatttcgagaccgatgctccaaaggatgttcctggagctccgagg 620 Query: 272 tcatggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtg 331 ||||||||| || ||||| ||||| || || ||| | || || ||||||| || || Sbjct: 621 caatggtggttcggtggtgggactgacttcacacctgcttacatctttgaagaagacgtc 680 Query: 332 aagcattttcattctgttcaaaaacaaacttgtgataagttcgatccaagtttttaccca 391 ||||| |||||||| ||| |||| ||| | || ||||| || ||||| || ||||| Sbjct: 681 aagcactttcattcggtttaaaagcaagcctgcgataaatttgatccgtcgttctaccct 740 Query: 392 agattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgtggg 451 | || || |||||||| ||||| || || || |||||||| ||| ||||||| || ||| Sbjct: 741 tggtttaagaaatggtgtgatgactacttttacattaagcaccgtgatgagaggcgaggg 800 Query: 452 cttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttctg 505 ||||| || ||||||||||||||| | ||||| ||||| ||||| ||||||||| Sbjct: 801 cttggagggatattttttgatgatttgaatgactatgatcaagagatgcttctg 854
>ref|NM_116557.4| Arabidopsis thaliana coproporphyrinogen oxidase AT4G03205 transcript variant AT4G03205.1 mRNA, complete cds Length = 1406 Score = 115 bits (58), Expect = 2e-22 Identities = 280/354 (79%) Strand = Plus / Plus Query: 152 ttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattg 211 |||||||||||||| | |||||||||| | ||||| |||| || |||||||| || || Sbjct: 531 ttctttgccgctggaaccagctcggttttgcatcctcagaacccttttgctccgactctg 590 Query: 212 catttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggtgcaccaaga 271 |||||||| || |||||||| || || ||||| ||||| ||||| ||||| || || || Sbjct: 591 catttcaattaccgctatttcgagaccgatgctccaaaggatgttcctggagctccgagg 650 Query: 272 tcatggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtg 331 ||||||||| || ||||| ||||| || || ||| | || || ||||||| || || Sbjct: 651 caatggtggttcggtggtgggactgacttcacacctgcttacatctttgaagaagacgtc 710 Query: 332 aagcattttcattctgttcaaaaacaaacttgtgataagttcgatccaagtttttaccca 391 ||||| |||||||| ||| |||| ||| | || ||||| || ||||| || ||||| Sbjct: 711 aagcactttcattcggtttaaaagcaagcctgcgataaatttgatccgtcgttctaccct 770 Query: 392 agattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgtggg 451 | || || |||||||| ||||| || || || |||||||| ||| ||||||| || ||| Sbjct: 771 tggtttaagaaatggtgtgatgactacttttacattaagcaccgtgatgagaggcgaggg 830 Query: 452 cttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttctg 505 ||||| || ||||||||||||||| | ||||| ||||| ||||| ||||||||| Sbjct: 831 cttggagggatattttttgatgatttgaatgactatgatcaagagatgcttctg 884
>gb|AY057708.1| Arabidopsis thaliana At4g03205 mRNA, complete cds Length = 1309 Score = 115 bits (58), Expect = 2e-22 Identities = 280/354 (79%) Strand = Plus / Plus Query: 152 ttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattg 211 |||||||||||||| | |||||||||| | ||||| |||| || |||||||| || || Sbjct: 531 ttctttgccgctggaaccagctcggttttgcatcctcagaacccttttgctccgactctg 590 Query: 212 catttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggtgcaccaaga 271 |||||||| || |||||||| || || ||||| ||||| ||||| ||||| || || || Sbjct: 591 catttcaattaccgctatttcgagaccgatgctccaaaggatgttcctggagctccgagg 650 Query: 272 tcatggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtg 331 ||||||||| || ||||| ||||| || || ||| | || || ||||||| || || Sbjct: 651 caatggtggttcggtggtgggactgacttcacacctgcttacatctttgaagaagacgtc 710 Query: 332 aagcattttcattctgttcaaaaacaaacttgtgataagttcgatccaagtttttaccca 391 ||||| |||||||| ||| |||| ||| | || ||||| || ||||| || ||||| Sbjct: 711 aagcactttcattcggtttaaaagcaagcctgcgataaatttgatccgtcgttctaccct 770 Query: 392 agattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgtggg 451 | || || |||||||| ||||| || || || |||||||| ||| ||||||| || ||| Sbjct: 771 tggtttaagaaatggtgtgatgactacttttacattaagcaccgtgatgagaggcgaggg 830 Query: 452 cttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttctg 505 ||||| || ||||||||||||||| | ||||| ||||| ||||| ||||||||| Sbjct: 831 cttggagggatattttttgatgatttgaatgactatgatcaagagatgcttctg 884
>emb|X82831.1|NTCIIIO N.tabacum mRNA for coproporphyrinogen oxidase Length = 1534 Score = 109 bits (55), Expect = 1e-20 Identities = 256/323 (79%) Strand = Plus / Plus Query: 182 catcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacagat 241 ||||| || ||||| ||||| ||||| |||||||| || ||||| || ||||| || ||| Sbjct: 583 catccaaaaaatccatttgcaccaactttgcattttaattatcgttactttgagactgat 642 Query: 242 gcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggaggtggtactgatttg 301 || |||||||||| || || |||||||| |||||||||||| ||||||||||| || Sbjct: 643 gcgccaaaagatgcaccaggagcaccaaggcaatggtggtttggtggtggtactgacttt 702 Query: 302 actccttcctatctcattgaagaggatgtgaagcattttcattctgttcaaaaacaaact 361 || ||| | || | | || |||||||| ||||| || ||||| || |||||| || Sbjct: 703 acacctgcttacattttcgaggaggatgtcaagcacttccattcggtgcaaaaagctgct 762 Query: 362 tgtgataagttcgatccaagtttttacccaagattcaaaaaatggtgcgatgattatttc 421 |||||||| || ||| | || || ||||| | || || |||||||| | || |||||| Sbjct: 763 tgtgataaatttgatgctagcttctaccctcggtttaagaaatggtgtgtagactatttc 822 Query: 422 tatattaagcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaat 481 ||||||||||||||| ||||||| || || ||||| |||||||||||||||||| | || Sbjct: 823 tatattaagcatcgtgatgagaggcgaggtcttggaggaatattttttgatgatttcaac 882 Query: 482 gattatgaccaagacatgcttct 504 || || || ||||| |||||||| Sbjct: 883 gactacgatcaagaaatgcttct 905
>gb|BT014254.1| Lycopersicon esculentum clone 133456F, mRNA sequence Length = 1493 Score = 105 bits (53), Expect = 2e-19 Identities = 323/413 (78%) Strand = Plus / Plus Query: 149 cccttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaaca 208 ||||| ||||| |||||| | ||||||||| | ||||| || || || ||||| ||||| Sbjct: 581 cccttttttgctgctggcgttagctcggttatacatccaaaaaacccctttgcaccaact 640 Query: 209 ttgcatttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctggtgcacca 268 | |||||||| |||||||| || || || ||||| || |||||| || || ||||| Sbjct: 641 gtacatttcaattatcgctacttcgagactgatgctcctaaagatactccaggagcacct 700 Query: 269 agatcatggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggat 328 || |||||||||||||||||| |||||| |||| ||| | || | | || |||||| Sbjct: 701 aggcaatggtggtttggaggtggcactgatctgacacctgcttacattttcgaggaggat 760 Query: 329 gtgaagcattttcattctgttcaaaaacaaacttgtgataagttcgatccaagtttttac 388 |||||||| || ||||| || |||||| ||||||| || || ||| | ||||| ||| Sbjct: 761 gtgaagcacttccattcggtgcaaaaaggtgcttgtgacaaatttgatgctagtttctac 820 Query: 389 ccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgt 448 || | ||||| || ||||| ||||||||||||||||| ||||| ||| ||||||| || Sbjct: 821 cctcgtttcaagaagtggtgtgatgattatttctatataaagcaccgtgatgagaggcga 880 Query: 449 gggcttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttctgaac 508 || ||||| ||||| |||||||| ||| | || || ||||| || || |||||||| | Sbjct: 881 ggtcttggaggaattttttttgacgatttaaacgactatgatcaggagatgcttctctcc 940 Query: 509 tttgccacagaatgtgccggttctgtaattcctgcatacatacccatcataga 561 ||| | ||||| |||||| ||| || ||||| ||||| ||||| |||||||| Sbjct: 941 ttttctacagagtgtgccaattccgtcattccagcatatatacctatcataga 993
>emb|BX813617.1|CNS0ADFW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZB04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 87.7 bits (44), Expect = 4e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 182 catcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacagat 241 ||||||||||| || ||||| ||||| |||||||||| ||||||||||| || ||| | Sbjct: 527 catcccaagaacccttttgccccaaccctgcatttcaattatcgctatttcgagacatag 586 Query: 242 gcaccaaaagatgtgcctggtgcaccaagatcatggtggtttggaggtggtactgatttg 301 || ||||| ||||| ||||| || ||||| |||||||||||| ||||| ||| |||| Sbjct: 587 gctccaaaggatgttcctggagccccaaggcaatggtggtttggtggtggcacttatttc 646 Query: 302 actccttcctatctcattgaagaggatgtgaagcattttcattc 345 |||||| | || || ||||||| ||||| |||||||| ||||| Sbjct: 647 actcctgcttacatctttgaagaagatgttaagcatttccattc 690 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 441 agagacgtgggcttggcggaatattttttgatgatcttaatgattatgaccaagacatgc 500 ||||||| || ||||| || ||||||||||||||||||||||| ||| | || || |||| Sbjct: 786 agagacgaggacttggagggatattttttgatgatcttaatgactattatcaggaaatgc 845 Query: 501 ttctg 505 ||||| Sbjct: 846 ttctg 850
>gb|AC002560.2|AC002560 Genomic sequence for Arabidopsis thaliana BAC F21B7 from chromosome I, complete sequence Length = 101176 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||| |||||||||| || ||||| || ||||||||||||||||||||||| |||| Sbjct: 33775 agcaccgtgatgagagacgaggacttggagggatattttttgatgatcttaatgactatg 33716 Query: 489 accaagacatgcttctg 505 | || || ||||||||| Sbjct: 33715 atcaggaaatgcttctg 33699 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 182 catcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacagat 241 ||||||||||| || ||||| ||||| |||||||||| ||||||||||| || |||||| Sbjct: 34376 catcccaagaacccttttgccccaaccctgcatttcaattatcgctatttcgagacagat 34317 Query: 242 gcaccaaa 249 || ||||| Sbjct: 34316 gctccaaa 34309 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 274 atggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtgaa 333 |||||||||||| ||||| |||||||| |||||| | || || ||||||| ||||| || Sbjct: 34196 atggtggtttggtggtggcactgatttcactcctgcttacatctttgaagaagatgtcaa 34137 Query: 334 gcattttcattc 345 |||||| ||||| Sbjct: 34136 gcatttccattc 34125
>gb|AY486623.1| Hevea brasiliensis clone mHbCIRTAs2188 microsatellite sequences Length = 495 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 274 atggtggtttggaggtggtactgatttgactccttcctatctcattgaagaggatgtgaa 333 |||||||||||| ||||| ||||||||||||||| | || || |||| ||||||||||| Sbjct: 338 atggtggtttggcggtgggactgatttgactcctgcttacatctttgaggaggatgtgaa 279 Query: 334 gcattttcattc 345 |||||| ||||| Sbjct: 278 gcatttccattc 267
>ref|NM_116558.2| Arabidopsis thaliana coproporphyrinogen oxidase AT4G03205 transcript variant AT4G03205.2 mRNA, complete cds Length = 1738 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 152 ttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattg 211 |||||||||||||| | |||||||||| | ||||| |||| || |||||||| || || Sbjct: 531 ttctttgccgctggaaccagctcggttttgcatcctcagaacccttttgctccgactctg 590 Query: 212 catttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctgg 261 |||||||| || |||||||| || || ||||| ||||| ||||| ||||| Sbjct: 591 catttcaattaccgctatttcgagaccgatgctccaaaggatgttcctgg 640 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||| ||||||| || |||||||| || ||||||||||||||| | ||||| |||| Sbjct: 1085 agcaccgtgatgagaggcgagggcttggagggatattttttgatgatttgaatgactatg 1144 Query: 489 accaagacatgcttctg 505 | ||||| ||||||||| Sbjct: 1145 atcaagagatgcttctg 1161
>gb|BT006346.1| Arabidopsis thaliana At4g03205 gene, complete cds Length = 702 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 152 ttctttgccgctggcatcagctcggttcttcatcccaagaatccgtttgctccaacattg 211 |||||||||||||| | |||||||||| | ||||| |||| || |||||||| || || Sbjct: 502 ttctttgccgctggaaccagctcggttttgcatcctcagaacccttttgctccgactctg 561 Query: 212 catttcaactatcgctattttgaaacagatgcaccaaaagatgtgcctgg 261 |||||||| || |||||||| || || ||||| ||||| ||||| ||||| Sbjct: 562 catttcaattaccgctatttcgagaccgatgctccaaaggatgttcctgg 611
>dbj|AP006368.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT21K08, TM0191, complete sequence Length = 76693 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 182 catcccaagaatccgtttgctccaacattgcatttcaactatcgctattttgaaacagat 241 ||||||||||| || ||||| || || |||||||||||||||||||||||||||| ||| Sbjct: 72843 catcccaagaacccatttgcccctaccatgcatttcaactatcgctattttgaaactgat 72902 Query: 242 gc 243 || Sbjct: 72903 gc 72904 Score = 63.9 bits (32), Expect = 5e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 449 gggcttggcggaatattttttgatgatcttaatgattatgaccaagacatgcttct 504 |||||||| |||||||||||||||||| | ||||| ||||| ||||| |||||||| Sbjct: 74617 gggcttggaggaatattttttgatgatttgaatgactatgatcaagagatgcttct 74672 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 |||||||||| ||||||| ||||| ||||| | || ||||| ||||||| || |||| Sbjct: 73835 ttcaaaaacaggcttgtgacaagtttgatcctaccttctacccccgattcaagaagtggt 73894 Query: 408 gcgatgattatttctatat 426 |||||||||| || ||||| Sbjct: 73895 gcgatgattacttttatat 73913
>gb|AC005275.1| Arabidopsis thaliana BAC F4C21 from chromosome IV, top arm, near 17 cM, complete sequence Length = 136335 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||| ||||||| || |||||||| || ||||||||||||||| | ||||| |||| Sbjct: 46811 agcaccgtgatgagaggcgagggcttggagggatattttttgatgatttgaatgactatg 46870 Query: 489 accaagacatgcttctg 505 | ||||| ||||||||| Sbjct: 46871 atcaagagatgcttctg 46887
>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8 Length = 195429 Score = 65.9 bits (33), Expect = 1e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 429 agcatcgtaatgagagacgtgggcttggcggaatattttttgatgatcttaatgattatg 488 |||| ||| ||||||| || |||||||| || ||||||||||||||| | ||||| |||| Sbjct: 65183 agcaccgtgatgagaggcgagggcttggagggatattttttgatgatttgaatgactatg 65242 Query: 489 accaagacatgcttctg 505 | ||||| ||||||||| Sbjct: 65243 atcaagagatgcttctg 65259
>emb|X71083.1|GMCOPROX G.max gene for coproporphyrinogen oxidase Length = 4641 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 449 gggcttggcggaatattttttgatgatcttaatgattatga 489 |||||||| |||||||||||||||||||||||||| ||||| Sbjct: 3491 gggcttggaggaatattttttgatgatcttaatgactatga 3531 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 212 catttcaactatcgctattttgaaacagatgc 243 |||||||||||||||||||||||||| ||||| Sbjct: 1428 catttcaactatcgctattttgaaaccgatgc 1459 Score = 54.0 bits (27), Expect = 5e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 348 ttcaaaaacaaacttgtgataagttcgatccaagtttttacccaagattcaaaaaatggt 407 ||||||||||| | ||||| ||||| || || | ||||||||| ||||||| ||||||| Sbjct: 2417 ttcaaaaacaagcctgtgacaagtttgaacctactttttacccccgattcaagaaatggt 2476 Query: 408 gcgatgattatttctatat 426 | |||||||| || ||||| Sbjct: 2477 gtgatgattacttttatat 2495
>gb|AY774822.1| Synthetic construct Francisella tularensis clone FLH150846.01X NT02FT1461 gene, complete cds Length = 927 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 389 ccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgt 448 |||| ||||||||||||||| ||||| ||||| ||| | || |||||| ||||| | ||| Sbjct: 505 ccaaaattcaaaaaatggtgtgatgagtatttttatctcaaacatcgtgatgagtgtcgt 564 Query: 449 gggcttggcggaatattttttgatgatcttaatgat 484 ||| |||| || |||||||||||||| | |||||| Sbjct: 565 ggggttggtggtttattttttgatgatttaaatgat 600
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 63.9 bits (32), Expect = 5e-07 Identities = 80/96 (83%) Strand = Plus / Plus Query: 389 ccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgt 448 |||| ||||||||||||||| ||||| ||||| ||| | || |||||| ||||| | ||| Sbjct: 1071837 ccaaaattcaaaaaatggtgtgatgagtatttttatctcaaacatcgtgatgagtgtcgt 1071896 Query: 449 gggcttggcggaatattttttgatgatcttaatgat 484 ||| |||| || |||||||||||||| | |||||| Sbjct: 1071897 ggggttggtggtttattttttgatgatttaaatgat 1071932
>emb|AJ303114.1|HVU303114 Hordeum vulgare partial mRNA for lectin, clone 5A6T7 Length = 379 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 530 tctgtaattcctgcatacatacccatcatagaacg 564 |||||||||||||||||||| |||||||||||||| Sbjct: 95 tctgtaattcctgcatacatccccatcatagaacg 129
>dbj|AB050118.1| Amaranthus tricolor COPROX mRNA for coproporphyrinogen oxidase, partial cds Length = 480 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 275 tggtggtttggaggtggtactgatttgactccttccta 312 |||||||||||||||||||||||||| |||||| |||| Sbjct: 1 tggtggtttggaggtggtactgatttcactcctgccta 38 Score = 54.0 bits (27), Expect = 5e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 458 ggaatattttttgatgatcttaatgattatgaccaagacatgcttct 504 ||||| |||||||| ||||| ||||| ||||||||||| |||||||| Sbjct: 184 ggaatcttttttgacgatctaaatgactatgaccaagaaatgcttct 230
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 404 tggtgcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaata 463 ||||||||||||||||| | ||||||||| | ||||| ||||||| ||||||| || Sbjct: 1342090 tggtgcgatgattatttttttattaagcacagaaatgaagcacgtgggattggcggctta 1342031 Query: 464 ttttttgatgat 475 |||||||||||| Sbjct: 1342030 ttttttgatgat 1342019
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 56.0 bits (28), Expect = 1e-04 Identities = 61/72 (84%) Strand = Plus / Minus Query: 404 tggtgcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaata 463 ||||||||||||||||| | ||||||||| | ||||| ||||||| ||||||| || Sbjct: 1364441 tggtgcgatgattatttttttattaagcacagaaatgaagcacgtgggattggcggctta 1364382 Query: 464 ttttttgatgat 475 |||||||||||| Sbjct: 1364381 ttttttgatgat 1364370
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 56.0 bits (28), Expect = 1e-04 Identities = 79/96 (82%) Strand = Plus / Minus Query: 389 ccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaatgagagacgt 448 |||| ||||||||||||||| ||||| ||||| ||| | || |||||| ||||| ||| Sbjct: 981019 ccaaaattcaaaaaatggtgtgatgagtatttttatctcaaacatcgtgatgagtatcgt 980960 Query: 449 gggcttggcggaatattttttgatgatcttaatgat 484 ||| |||| || |||||||||||||| | |||||| Sbjct: 980959 ggggttggtggtttattttttgatgatttaaatgat 980924
>emb|BX571863.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 5/17 Length = 349318 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 384 tttacccaagattcaaaaaatggtgcgatgattatttctatattaagcatcgtaa 438 ||||||||| || ||| ||||||| ||| |||||||||||||||| |||||||| Sbjct: 272572 tttacccaaaatataaagaatggtgtgataattatttctatattaaacatcgtaa 272518
>ref|XM_455911.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F18546g predicted mRNA Length = 1128 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 386 tacccaagattcaaaaaatggtgcgatgattatttctatat 426 ||||||| || ||| |||||||||||||| ||||||||||| Sbjct: 700 tacccaaaatacaagaaatggtgcgatgagtatttctatat 740
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 386 tacccaagattcaaaaaatggtgcgatgattatttctatat 426 ||||||| || ||| |||||||||||||| ||||||||||| Sbjct: 1707443 tacccaaaatacaagaaatggtgcgatgagtatttctatat 1707483
>ref|XM_624462.1| PREDICTED: Apis mellifera similar to GA17449-PA (LOC552084), mRNA Length = 1071 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 274 atggtggtttggaggtggtactgat 298 ||||||||||||||||||||||||| Sbjct: 528 atggtggtttggaggtggtactgat 552
>emb|AJ519802.1|KLA519802 Kluyveromyces lactis hem13 gene for coproporphyrinogen oxidase and rpc11 gene for RNA polymerase III C11 subunit Length = 3412 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 386 tacccaagattcaaaaaatggtgcgatgattatttctatat 426 ||||||| || ||| |||||||||||||| ||||||||||| Sbjct: 1762 tacccaaaatacaagaaatggtgcgatgagtatttctatat 1802
>emb|AJ271631.2|KLA271631 Kluyveromyces lactis partial HEM13 gene for putative coproporphyrinogen oxidase Length = 469 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 386 tacccaagattcaaaaaatggtgcgatgattatttctatat 426 ||||||| || ||| |||||||||||||| ||||||||||| Sbjct: 79 tacccaaaatacaagaaatggtgcgatgagtatttctatat 119
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 48.1 bits (24), Expect = 0.032 Identities = 60/72 (83%) Strand = Plus / Minus Query: 404 tggtgcgatgattatttctatattaagcatcgtaatgagagacgtgggcttggcggaata 463 ||||||||||||||||| | ||||||||| | ||||| |||||| ||||||| || Sbjct: 1358580 tggtgcgatgattatttttttattaagcacagaaatgaagcacgtggaattggcggttta 1358521 Query: 464 ttttttgatgat 475 |||||||||||| Sbjct: 1358520 ttttttgatgat 1358509
>gb|DQ311346.1| Bombyx mori coproporphirynogen oxidase mRNA, complete cds Length = 1585 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 392 agattcaaaaaatggtgcgatgattatttcta 423 |||||||| ||||||||||||||||| ||||| Sbjct: 750 agattcaagaaatggtgcgatgattacttcta 781
>gb|AY557656.1| Saccharomyces cerevisiae clone FLH001458.01X YDR044W gene, complete cds Length = 987 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 275 tggtggtttggaggtggtactgatttgactccttc 309 ||||||||||| |||||| |||||||||| ||||| Sbjct: 445 tggtggtttggtggtggtgctgatttgacaccttc 479
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 44 gtgaacgtgtccgtcgtgtacggggtcatgccccc 78 |||||| | ||||||||||||||||||| |||||| Sbjct: 14469492 gtgaacatctccgtcgtgtacggggtcacgccccc 14469526
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 335 cattttcattctgttcaaaaaca 357 ||||||||||||||||||||||| Sbjct: 16903778 cattttcattctgttcaaaaaca 16903800
>dbj|AP005200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0673E01 Length = 125909 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 44 gtgaacgtgtccgtcgtgtacggggtcatgccccc 78 |||||| | ||||||||||||||||||| |||||| Sbjct: 89823 gtgaacatctccgtcgtgtacggggtcacgccccc 89857
>dbj|AP006236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0029L04 Length = 117192 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 335 cattttcattctgttcaaaaaca 357 ||||||||||||||||||||||| Sbjct: 7990 cattttcattctgttcaaaaaca 8012
>dbj|AK068716.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C09, full insert sequence Length = 3660 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 44 gtgaacgtgtccgtcgtgtacggggtcatgccccc 78 |||||| | ||||||||||||||||||| |||||| Sbjct: 1505 gtgaacatctccgtcgtgtacggggtcacgccccc 1471
>emb|Z49812.1|SC5112X S.cerevisiae chromosome IV cosmid 5112 Length = 6165 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 275 tggtggtttggaggtggtactgatttgactccttc 309 ||||||||||| |||||| |||||||||| ||||| Sbjct: 5333 tggtggtttggtggtggtgctgatttgacaccttc 5367
>gb|J03873.1|YSCCPO Yeast (S.cerevisiae) coproporphyrinogen oxidase gene, complete cds Length = 1952 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 275 tggtggtttggaggtggtactgatttgactccttc 309 ||||||||||| |||||| |||||||||| ||||| Sbjct: 1046 tggtggtttggtggtggtgctgatttgacaccttc 1080
>gb|AE017137.1| Yersinia pestis biovar Medievalis str. 91001 section 11 of 16 of the complete genome Length = 291817 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 398 aaaaaatggtgcgatgattatttctatattaagcatcg 435 ||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 38826 aaaaaatggtgtgatgactatttttatattaaacatcg 38863
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Minus Query: 398 aaaaaatggtgcgatgattatttctatattaagcatcg 435 ||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 1609079 aaaaaatggtgtgatgactatttttatattaaacatcg 1609042
>gb|AC135605.25| Medicago truncatula clone mth2-7m1, complete sequence Length = 121648 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 268 aagatcatggtggtttggaggt 289 |||||||||||||||||||||| Sbjct: 116095 aagatcatggtggtttggaggt 116116
>gb|AC124964.17| Medicago truncatula clone mth2-27c4, complete sequence Length = 114519 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 268 aagatcatggtggtttggaggt 289 |||||||||||||||||||||| Sbjct: 3790 aagatcatggtggtttggaggt 3769
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 398 aaaaaatggtgcgatgattatttctatattaagcatcg 435 ||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 3253669 aaaaaatggtgtgatgactatttttatattaaacatcg 3253706
>emb|AJ414155.1| Yersinia pestis strain CO92 complete genome; segment 15/20 Length = 205050 Score = 44.1 bits (22), Expect = 0.50 Identities = 34/38 (89%) Strand = Plus / Plus Query: 398 aaaaaatggtgcgatgattatttctatattaagcatcg 435 ||||||||||| ||||| ||||| |||||||| ||||| Sbjct: 10568 aaaaaatggtgtgatgactatttttatattaaacatcg 10605
>gb|CP000236.1| Ehrlichia chaffeensis str. Arkansas, complete genome Length = 1176248 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Minus Query: 278 tggtttggaggtggtactgatttgactcct 307 |||||||||||||||| |||||||||||| Sbjct: 598119 tggtttggaggtggtatagatttgactcct 598090
>dbj|AK113694.1| Ciona intestinalis cDNA, clone:cicl004i13, full insert sequence Length = 1361 Score = 44.1 bits (22), Expect = 0.50 Identities = 28/30 (93%) Strand = Plus / Plus Query: 385 ttacccaagattcaaaaaatggtgcgatga 414 |||||||| |||||| |||||||||||||| Sbjct: 749 ttacccaaaattcaagaaatggtgcgatga 778 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tggtggtttggaggtggtactgat 298 ||||||||||||||||| |||||| Sbjct: 639 tggtggtttggaggtggaactgat 662
>gb|BC036662.1| Homo sapiens hypothetical protein LOC283537, mRNA (cDNA clone MGC:33253 IMAGE:4827143), complete cds Length = 3322 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 2936 tgatttgactccttcccatctcatt 2960
>emb|AL359454.7| Human DNA sequence from clone RP11-97E23 on chromosome 13 Contains a novel gene (HSPC014), a novel gene (FKSG16) and a cytochrome P450, 51 (lanosterol 14-alpha-demethylase) (CYP51) pseudogene, complete sequence Length = 101830 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 75324 tgatttgactccttcccatctcatt 75300
>emb|BX537565.1|HSM806184 Homo sapiens mRNA; cDNA DKFZp686A1775 (from clone DKFZp686A1775) Length = 3176 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 2785 tgatttgactccttcccatctcatt 2809
>gb|BC068556.1| Homo sapiens hypothetical protein LOC283537, mRNA (cDNA clone MGC:87475 IMAGE:4820792), complete cds Length = 3186 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 2802 tgatttgactccttcccatctcatt 2826
>dbj|AK124604.1| Homo sapiens cDNA FLJ42613 fis, clone BRACE3014005 Length = 4035 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 3667 tgatttgactccttcccatctcatt 3691
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ttttcattctgttcaaaaaca 357 ||||||||||||||||||||| Sbjct: 12413425 ttttcattctgttcaaaaaca 12413405 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 337 ttttcattctgttcaaaaaca 357 ||||||||||||||||||||| Sbjct: 12409043 ttttcattctgttcaaaaaca 12409023
>gb|AC021011.5| Homo sapiens BAC clone RP11-32K22 from 4, complete sequence Length = 43958 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 463 attttttgatgatcttaatga 483 ||||||||||||||||||||| Sbjct: 3793 attttttgatgatcttaatga 3813
>ref|NM_181785.1| Homo sapiens hypothetical protein LOC283537 (LOC283537), mRNA Length = 3176 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 2785 tgatttgactccttcccatctcatt 2809
>gb|AC007533.2|AC007533 Homo sapiens chromosome 16 clone RPCI-11_474B12, complete sequence Length = 153053 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 335 cattttcattctgttcaaaaa 355 ||||||||||||||||||||| Sbjct: 139674 cattttcattctgttcaaaaa 139654
>dbj|AK026720.1| Homo sapiens cDNA: FLJ23067 fis, clone LNG04993 Length = 2143 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 295 tgatttgactccttcctatctcatt 319 |||||||||||||||| |||||||| Sbjct: 1754 tgatttgactccttcccatctcatt 1778
>gb|AF133672.1|AF133672 Chlamydomonas reinhardtii coproporphyrinogen III oxidase precursor (Cpx1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 2028 Score = 42.1 bits (21), Expect = 2.0 Identities = 62/76 (81%) Strand = Plus / Plus Query: 23 aacgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacggggtcatgcccccggnc 82 ||||||| ||| ||||||| || ||||||||||| || ||||| ||||||||| | Sbjct: 481 aacgtgtgggagaaggccggcgtcaacgtgtccgtggtctacggcaccatgccccctgag 540 Query: 83 gcctaccgcgccgcca 98 ||||||||||| |||| Sbjct: 541 gcctaccgcgctgcca 556
>gb|AY570722.1| Ostreococcus tauri BAMYI (bamy1) gene, complete cds Length = 1809 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 23 aacgtgttcgagtaggccggggtgaacgtgtccgtcgtgtacgg 66 ||||||||||| |||| || ||||||||||| || |||||||| Sbjct: 376 aacgtgttcgaaaaggctggcgtgaacgtgtcggtggtgtacgg 419
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 tcattgaagaggatgtgaagcatt 338 ||||||||| |||||||||||||| Sbjct: 4644677 tcattgaaggggatgtgaagcatt 4644654
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 tcattgaagaggatgtgaagcatt 338 ||||||||| |||||||||||||| Sbjct: 4645773 tcattgaaggggatgtgaagcatt 4645750
>ref|XM_705922.1| Candida albicans SC5314 coproporphyrinogen III oxidase (CaO19.10321), mRNA Length = 972 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 397 caaaaaatggtgcgatgattatttctatattaagcatcgt 436 |||||||||||| ||||| ||||||| ||| || |||||| Sbjct: 555 caaaaaatggtgtgatgaatatttctttatcaaacatcgt 594
>ref|XM_705907.1| Candida albicans SC5314 coproporphyrinogen III oxidase. (CaO19.2803), mRNA Length = 972 Score = 40.1 bits (20), Expect = 7.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 397 caaaaaatggtgcgatgattatttctatattaagcatcgt 436 |||||||||||| ||||| ||||||| ||| || |||||| Sbjct: 555 caaaaaatggtgtgatgaatatttctttatcaaacatcgt 594
>gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosome 15, complete sequence Length = 194622 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 330 tgaagcattttcattctgtt 349 |||||||||||||||||||| Sbjct: 88820 tgaagcattttcattctgtt 88801
>gb|AC123044.4| Mus musculus BAC clone RP24-548B7 from chromosome 5, complete sequence Length = 184772 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 475 tcttaatgattatgaccaagacat 498 ||||||||||| |||||||||||| Sbjct: 50112 tcttaatgattgtgaccaagacat 50135
>gb|AC121985.3| Mus musculus BAC clone RP24-293C3 from chromosome 8, complete sequence Length = 150444 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 tgcaccaaaagatgtgcctggtgc 264 ||||||||||| |||||||||||| Sbjct: 80939 tgcaccaaaagttgtgcctggtgc 80916
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 tcattgaagaggatgtgaagcatt 338 ||||||||| |||||||||||||| Sbjct: 4711196 tcattgaaggggatgtgaagcatt 4711173
>gb|AC133863.34| Medicago truncatula clone mth2-16f20, complete sequence Length = 139062 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 gaagcattttcattctgttc 350 |||||||||||||||||||| Sbjct: 79168 gaagcattttcattctgttc 79149
>gb|AC149496.23| Medicago truncatula clone mth2-119c5, complete sequence Length = 115576 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gaagcattttcattctgttc 350 |||||||||||||||||||| Sbjct: 23012 gaagcattttcattctgttc 23031
>gb|AC147008.21| Medicago truncatula clone mth2-106d6, complete sequence Length = 144439 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 gaagcattttcattctgttc 350 |||||||||||||||||||| Sbjct: 56200 gaagcattttcattctgttc 56219
>emb|AL049557.19|HSJ773A18 Human DNA sequence from clone RP4-773A18 on chromosome 1p13.2-21.1 Contains a keratin 18 (KRT18) pseudogene, the 3' end of the RAP1A gene for RAP1A member of RAS oncogene family, three novel genes, the DDX20 gene for DEAD (Asp-Glu-Ala-Asp) box polypeptide 20, the 3' end of the KCND3 gene for potassium voltage-gated channel Shal-related subfamily member 3 and two CpG islands, complete sequence Length = 128379 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 9263 cattttcattctgttcaaaa 9282
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 7.8 Identities = 38/44 (86%) Strand = Plus / Plus Query: 398 aaaaaatggtgcgatgattatttctatattaagcatcgtaatga 441 ||||||||||| ||||| ||||||||| | ||||| ||| |||| Sbjct: 4197031 aaaaaatggtgtgatgagtatttctatttaaagcaccgtgatga 4197074
>emb|BX321860.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 5/10 Length = 303050 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 460 aatattttttgatgatcttaatga 483 ||||||||||||||||| |||||| Sbjct: 140344 aatattttttgatgatcgtaatga 140321
>emb|CR394564.8| Zebrafish DNA sequence from clone DKEY-1K1 in linkage group 8, complete sequence Length = 227475 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 ctgttcaaaaacaaacttgt 364 |||||||||||||||||||| Sbjct: 190732 ctgttcaaaaacaaacttgt 190751
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cgcctaccgcgccgccaagg 101 |||||||||||||||||||| Sbjct: 4232164 cgcctaccgcgccgccaagg 4232145
>gb|AC009638.9| Homo sapiens chromosome 11, clone RP11-47K5, complete sequence Length = 157610 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 461 atattttttgatgatcttaa 480 |||||||||||||||||||| Sbjct: 12871 atattttttgatgatcttaa 12890
>ref|XM_623407.1| PREDICTED: Apis mellifera similar to putative cell-adhesion protein (LOC551011), mRNA Length = 5688 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 186 ccaagaatccgtttgctccaacat 209 |||| ||||||||||||||||||| Sbjct: 3684 ccaataatccgtttgctccaacat 3661
>gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, complete sequence Length = 188920 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 141201 cattttcattctgttcaaaa 141182
>gb|AC019103.8| Homo sapiens BAC clone RP11-460I19 from 4, complete sequence Length = 177950 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 12970 cattttcattctgttcaaaa 12951
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 cgcctaccgcgccgccaagg 101 |||||||||||||||||||| Sbjct: 331279 cgcctaccgcgccgccaagg 331260
>emb|BX119907.8| Zebrafish DNA sequence from clone CH211-208D14 in linkage group 6, complete sequence Length = 181060 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 28043 cattttcattctgttcaaaa 28024
>emb|BX005398.6| Zebrafish DNA sequence from clone CH211-207O17, complete sequence Length = 209859 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 attatttctatattaagcat 433 |||||||||||||||||||| Sbjct: 58640 attatttctatattaagcat 58621
>emb|CR854912.18| Zebrafish DNA sequence from clone DKEY-39O12 in linkage group 6, complete sequence Length = 170067 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 7696 cattttcattctgttcaaaa 7715
>emb|BX247907.8| Zebrafish DNA sequence from clone CH211-232D19 in linkage group 8, complete sequence Length = 169530 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 345 ctgttcaaaaacaaacttgtgata 368 ||||||||||||| |||||||||| Sbjct: 83541 ctgttcaaaaacacacttgtgata 83564
>gb|AC004065.1|AC004065 Homo sapiens chromosome 4 clone B344K19 map 4q25, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 cattttcattctgttcaaaa 354 |||||||||||||||||||| Sbjct: 148808 cattttcattctgttcaaaa 148827
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 82 cgcctaccgcgccgccaagg 101 |||||||||||||||||||| Sbjct: 2219866 cgcctaccgcgccgccaagg 2219885
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 315 tcattgaagaggatgtgaagcatt 338 ||||||||| |||||||||||||| Sbjct: 4644550 tcattgaaggggatgtgaagcatt 4644527
>emb|CT009749.1| Medicago truncatula chromosome 5 clone mth2-46e3, COMPLETE SEQUENCE Length = 138861 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 466 ttttgatgatcttaatgattatga 489 ||||| |||||||||||||||||| Sbjct: 84439 ttttgttgatcttaatgattatga 84416
>emb|CR628370.28| Zebrafish DNA sequence from clone DKEY-33L16 in linkage group 22, complete sequence Length = 190967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 414 attatttctatattaagcat 433 |||||||||||||||||||| Sbjct: 145858 attatttctatattaagcat 145839
>emb|AL713920.14| Mouse DNA sequence from clone RP23-330B20 on chromosome X, complete sequence Length = 156186 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 273 catggtggtttggaggtggt 292 |||||||||||||||||||| Sbjct: 50343 catggtggtttggaggtggt 50324 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,103,155 Number of Sequences: 3902068 Number of extensions: 5103155 Number of successful extensions: 98176 Number of sequences better than 10.0: 108 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 97292 Number of HSP's gapped (non-prelim): 878 length of query: 571 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 548 effective length of database: 17,143,297,704 effective search space: 9394527141792 effective search space used: 9394527141792 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
