ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9e08 |
|---|---|
| Clone Library Name | barley_pub |
>BGLX_SALTY (Q56078) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) (T-cell inhibitor) Length = 765 Score = 59.3 bits (142), Expect(2) = 1e-09 Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 2/160 (1%) Frame = +3 Query: 81 WGRCYESYSEDPKVVQSM-TTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTF 257 WGR E + ED + M T++ +QG PA V KH+ G Sbjct: 167 WGRASEGFGEDTYLTSIMGETMVKAMQGKSPADRYS---------VMTSVKHFAAYGAVE 217 Query: 258 MGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHANHFLVTDFLKNK 437 G N + + L +MP Y + G VM + +S NG ++ +L+ D L+++ Sbjct: 218 GGKEYNTVDMSSQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDE 277 Query: 438 LKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGIDM 554 F+G +SD I + I + +V + AG+DM Sbjct: 278 WGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKAGVDM 317 Score = 22.7 bits (47), Expect(2) = 1e-09 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 5 TALEVRATGIPYAFAPCIAVCRDPSMG 85 +A E G+ +AP + V RDP G Sbjct: 142 SAYEAADDGLNMTWAPMVDVSRDPRWG 168
>BGLB_CLOTM (P14002) Thermostable beta-glucosidase B (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 754 Score = 61.2 bits (147), Expect = 2e-09 Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 3/158 (1%) Frame = +3 Query: 84 GRCYESYSEDPKVVQSMTTL-ISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +E + EDP + + I G+Q S+ V AC KH+ + Sbjct: 118 GRNFEYFPEDPYLSSELAASHIKGVQ---------------SQGVGACLKHFAANNQEHR 162 Query: 261 GINENDTIIDAHGLMTIHMPAYYNSIIRGVS-TVMTSYSSWNGKKMHANHFLVTDFLKNK 437 + DTI+D L I+ ++ N++ + VM +Y+ NG+ N +L+T+ LKN+ Sbjct: 163 RMTV-DTIVDERTLREIYFASFENAVKKARPWVVMCAYNKLNGEYCSENRYLLTEVLKNE 221 Query: 438 LKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGI 548 GFV+SDW + DR++ G++ +E GI Sbjct: 222 WMHDGFVVSDWGAVNDRVS---GLDAGLDLEMPTSHGI 256
>BGLS_AGRTU (P27034) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 818 Score = 60.1 bits (144), Expect = 4e-09 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 5/162 (3%) Frame = +3 Query: 84 GRCYESYSEDPKVVQSMTTL-ISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +E YSEDP + + I+G+Q S+ VAA KH+V + Sbjct: 109 GRNFECYSEDPALTAACAVAYINGVQ---------------SQGVAATIKHFVANESEI- 152 Query: 261 GINENDTI---IDAHGLMTIHMPAYYNSIIR-GVSTVMTSYSSWNGKKMHANHFLVTDFL 428 E T+ +D L I++P + ++ + GV VM+SY+ NG N +L+T L Sbjct: 153 ---ERQTMSSDVDERTLREIYLPPFEEAVKKAGVKAVMSSYNKLNGTYTSENPWLLTKVL 209 Query: 429 KNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDM 554 + + F G V+SDW G S+S + AG+D+ Sbjct: 210 REEWGFDGVVMSDWFG------------SHSTAETINAGLDL 239
>BGLX_ECOLI (P33363) Periplasmic beta-glucosidase precursor (EC 3.2.1.21)| (Gentiobiase) (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 765 Score = 57.0 bits (136), Expect(2) = 5e-09 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 2/160 (1%) Frame = +3 Query: 81 WGRCYESYSEDPKVVQSM-TTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTF 257 WGR E + ED + +M T++ +QG PA V KH+ G Sbjct: 167 WGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYS---------VMTSVKHFAAYGAVE 217 Query: 258 MGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHANHFLVTDFLKNK 437 G N + L +MP Y + G VM + +S NG ++ +L+ D L+++ Sbjct: 218 GGKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRDQ 277 Query: 438 LKFRGFVISDWQGI-DRITSPPGVNYSYSVEAGVGAGIDM 554 F+G +SD I + I + +V + +GI+M Sbjct: 278 WGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINM 317 Score = 22.7 bits (47), Expect(2) = 5e-09 Identities = 10/27 (37%), Positives = 14/27 (51%) Frame = +2 Query: 5 TALEVRATGIPYAFAPCIAVCRDPSMG 85 +A E G+ +AP + V RDP G Sbjct: 142 SAYEAADDGLNMTWAPMVDVSRDPRWG 168
>BGLS_HANAN (P06835) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 825 Score = 54.3 bits (129), Expect = 2e-07 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 7/164 (4%) Frame = +3 Query: 84 GRCYESYSEDPK---VVQSMTTLISGLQGDVPAGSEGRPYVGGSKKVAACAKH--YVG-- 242 GR +E + DP V+ + T+ QG V S + +G ++ AK + G Sbjct: 168 GRGWEGHGPDPYLEGVIAYLQTIGIQSQGVV---STAKHLIGNEQEHFRFAKKDKHAGKI 224 Query: 243 DGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHANHFLVTD 422 D G F + + ID + I++ + ++ GVS++M SY+ NG N +L+ Sbjct: 225 DPGMFNTSSSLSSEIDDRAMHEIYLWPFAEAVRGGVSSIMCSYNKLNGSHACQNSYLLNY 284 Query: 423 FLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDM 554 LK +L F+GFV++DW G YS A G +DM Sbjct: 285 LLKEELGFQGFVMTDW----------GALYSGIDAANAGLDMDM 318
>BGL2_SACFI (P22507) Beta-glucosidase 2 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 880 Score = 52.0 bits (123), Expect = 1e-06 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 19/148 (12%) Frame = +3 Query: 84 GRCYESYSEDPKVVQ-SMTTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVG------ 242 GR +E++ DP + + I GLQ V AC KH++G Sbjct: 171 GRNFEAFGSDPYLQGIAAAATIKGLQ---------------ENNVMACVKHFIGNEQDIY 215 Query: 243 ------------DGGTFMGINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNG 386 D T I+ N I + +++ + +SI GV +VM SY+ N Sbjct: 216 RQPSNSKVDPEYDPATKESISAN---IPDRAMHELYLWPFADSIRAGVGSVMCSYNRVNN 272 Query: 387 KKMHANHFLVTDFLKNKLKFRGFVISDW 470 N +++ LK +L F+GFV+SDW Sbjct: 273 TYSCENSYMINHLLKEELGFQGFVVSDW 300
>BGLS_KLUMA (P07337) Beta-glucosidase precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 845 Score = 50.4 bits (119), Expect = 3e-06 Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 2/159 (1%) Frame = +3 Query: 84 GRCYESYSEDPKVVQSMTT-LISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +ES+SEDP + T+ ++ G+QG+ +AA KH+V + Sbjct: 112 GRGFESFSEDPYLAGMATSSVVKGMQGE---------------GIAATVKHFVCNDLEDQ 156 Query: 261 GINENDTIIDAHGLMTIHMPAYYNSIIRGVST-VMTSYSSWNGKKMHANHFLVTDFLKNK 437 + N +I+ L I++ + ++ +MT+Y+ NG + L+ D L+++ Sbjct: 157 RFSSN-SIVSERALREIYLEPFRLAVKHANPVCIMTAYNKVNGDHCSQSKKLLIDILRDE 215 Query: 438 LKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDM 554 K+ G ++SDW G +Y+ A + G+D+ Sbjct: 216 WKWDGMLMSDWFG------------TYTTAAAIKNGLDI 242
>BGL1_SACFI (P22506) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 876 Score = 49.7 bits (117), Expect = 6e-06 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 14/143 (9%) Frame = +3 Query: 84 GRCYESYSEDPKVV-QSMTTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +E++ DP + + I GLQ V AC KH++G+ Sbjct: 169 GRNFEAFGSDPYLQGTAAAATIKGLQ---------------ENNVMACVKHFIGNEQEKY 213 Query: 261 ----GINE--NDTIIDA-------HGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHA 401 IN N T +A + +++ + +S+ GV +VM SY+ N Sbjct: 214 RQPDDINPATNQTTKEAISANIPDRAMHALYLWPFADSVRAGVGSVMCSYNRVNNTYACE 273 Query: 402 NHFLVTDFLKNKLKFRGFVISDW 470 N +++ LK +L F+GFV+SDW Sbjct: 274 NSYMMNHLLKEELGFQGFVVSDW 296
>BGL1_ASPAC (P48825) Beta-glucosidase 1 precursor (EC 3.2.1.21) (Gentiobiase)| (Cellobiase) (Beta-D-glucoside glucohydrolase) Length = 860 Score = 48.5 bits (114), Expect = 1e-05 Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 16/173 (9%) Frame = +3 Query: 84 GRCYESYSEDPKVVQSM-TTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +E +S DP + + I G+Q AG V A AKHY+ + Sbjct: 155 GRNWEGFSPDPALTGVLFAETIKGIQD---AG------------VVATAKHYILNEQEHF 199 Query: 261 ---------GINENDTI---IDAHGLMTIHMPAYYNSIIRGVSTVMTSYSSWNGKKMHAN 404 G N +DTI +D + +++ + +++ GV +M SY+ N N Sbjct: 200 RQVAEAAGYGFNISDTISSNVDDKTIHEMYLWPFADAVRAGVGAIMCSYNQINNSYGCQN 259 Query: 405 HFLVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVG---AGIDM 554 + + LK +L F+GFV+SDW G ++S GVG AG+DM Sbjct: 260 SYTLNKLLKAELGFQGFVMSDW----------GAHHS-----GVGSALAGLDM 297
>BGLX_ERWCH (Q46684) Periplasmic beta-glucosidase/beta-xylosidase precursor| [Includes: Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase); Beta-xylosidase (EC 3.2.1.37) (1,4-beta-D-xylan xylohydrolase) (Xylan 1,4-beta-xylosidase)] Length = 654 Score = 45.8 bits (107), Expect = 8e-05 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 15/145 (10%) Frame = +3 Query: 81 WGRCYESYSEDPKVVQSMTT-LISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTF 257 W R ++ EDP + + M ++G+Q G G ++ V + KH+VG G Sbjct: 225 WPRIDGTFGEDPDLTKKMVRGYVTGMQN----GKNGL----NAQSVISIVKHWVGYGAAK 276 Query: 258 MGINENDTIID----AHGLMTIHMPAYYNSIIRGVSTVMTSYS-----SWNGKKMHA--- 401 G + ++ + H+ + + + +M +YS SW+GK + Sbjct: 277 DGWDSHNVYGKYAQFRQNNLQWHIDPFTGAFEAHAAGIMPTYSILRNASWHGKPIEQVGA 336 Query: 402 --NHFLVTDFLKNKLKFRGFVISDW 470 N FL+TD L+ + F G ++SDW Sbjct: 337 GFNRFLLTDLLRGQYGFDGVILSDW 361
>BGLS_BUTFI (P16084) Beta-glucosidase A (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 830 Score = 40.0 bits (92), Expect = 0.004 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 3/134 (2%) Frame = +3 Query: 84 GRCYESYSEDPKVV-QSMTTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDGGTFM 260 GR +E YSEDP + + ++ G+Q S + A KH+ + Sbjct: 656 GRNFEYYSEDPFLAGKQAAAMVRGIQ---------------SNNIIATPKHFALNNKE-S 699 Query: 261 GINENDTIIDAHGLMTIHMPAYYNSIIRGVSTVMT--SYSSWNGKKMHANHFLVTDFLKN 434 +D+ + I++ A+ I++ S + Y+ NG++ +H L+T L++ Sbjct: 700 NRKGSDSRASERAIREIYLKAF-EIIVKEQSPGASCLQYNIVNGQRSSESHDLLTGILRD 758 Query: 435 KLKFRGFVISDWQG 476 + F G V+SDW G Sbjct: 759 EWGFEGVVVSDWWG 772
>BGLS_RUMAL (P15885) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 947 Score = 38.1 bits (87), Expect = 0.017 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 5/154 (3%) Frame = +3 Query: 84 GRCYESYSEDPKVVQSMTTLISGLQGDVPAGSEG--RPYVGGSKKVAACAKHYVGDGGTF 257 GR +E +SEDP + +M + L+G G EG + + +++ +H++ Sbjct: 583 GRNFEYFSEDPFLTGTMAA--AELEGLHSVGVEGTIKHFCANNQETN---RHFI------ 631 Query: 258 MGINENDTIIDAHGLMTIHMPAYYNSIIRGVS-TVMTSYSSWNGKKMHANHFLVTDFLKN 434 D++ L I++ + ++ + + +VMT+Y NG + L T L+ Sbjct: 632 ------DSVASERALREIYLKGFEIAVRKSKARSVMTTYGKVNGLWTAGSFDLNTMILRK 685 Query: 435 KLKFRGFVISDWQG--IDRITSPPGVNYSYSVEA 530 + F GF ++DW DR +P N++ V A Sbjct: 686 QWGFDGFTMTDWWANINDRGCAPDKNNFAAMVRA 719
>SLIT2_RAT (Q9WVC1) Slit homolog 2 protein precursor (Slit-2) (Fragment)| Length = 766 Score = 32.7 bits (73), Expect = 0.71 Identities = 18/52 (34%), Positives = 22/52 (42%) Frame = -1 Query: 380 PARVRGHNSGDTSDDRIVISRHMDSHQPMGVNDCIVLVDPHKRTTITNIVLC 225 P+ +RGHN + V S + HQ C VL P T NIV C Sbjct: 239 PSHLRGHNVAEVQKREFVCSDEEEGHQSFMAPSCSVLHCPIACTCSNNIVDC 290
>DYHC_ASHGO (Q9C1M7) Dynein heavy chain, cytosolic (DYHC)| Length = 4083 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 4/61 (6%) Frame = +3 Query: 324 YYNSIIRGVSTVMTSYSSWNGKKMHANHFLVTDFLK---NKLKFRG-FVISDWQGIDRIT 491 +Y +I ST++ +++++ G+KM FL F+K N L+F G +I D + D I Sbjct: 3396 HYPYVIDPSSTIVDTFANFYGRKMMITSFLDVGFVKQLENALRFGGCILIQDGEFFDPII 3455 Query: 492 S 494 S Sbjct: 3456 S 3456
>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]| Length = 2559 Score = 30.8 bits (68), Expect = 2.7 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%) Frame = +3 Query: 51 RVLRCVE--TQVWGRCYESYSEDPKVVQSMTTLISGLQGDVPAGSEGRPYVGGSKKVAAC 224 +V +C + TQV C + Y D + +G+ G + R G K+ C Sbjct: 2103 KVAKCSQKGTQVSCSCQKGYKGDGHSCTEIDPCANGVNGGCHEHATCR-MTGPGKQKCEC 2161 Query: 225 AKHYVGDG 248 HYVGDG Sbjct: 2162 KSHYVGDG 2169
>NAGZ_CHRVO (Q7NWB7) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 357 Score = 30.8 bits (68), Expect = 2.7 Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 10/169 (5%) Frame = +3 Query: 81 WGRCY----ESYSEDPKVVQSMTTLISGLQGDVPAGSEGRPYVGGSKKVAACAKHYVGDG 248 W RC ++ DP+ V + L LQ + G + +C KHY G Sbjct: 131 WERCAVIGNRAFHRDPEAVSA---LAEALQQGLGRGG-----------MMSCGKHYPGH- 175 Query: 249 GTFMGINENDTIIDAHGLMTIH---MPAYYNSIIRGVSTVMTS---YSSWNGKKMHANHF 410 G G + + D L I + + G+ VM + Y + + + + Sbjct: 176 GYVEGDSHHLMPQDDRTLAQIEQDDLVPFARLADAGMGAVMPAHVLYPAVDSQPAGFSKV 235 Query: 411 LVTDFLKNKLKFRGFVISDWQGIDRITSPPGVNYSYSVEAGVGAGIDMI 557 +TD L+ ++ F G + SD +D + Y +A + AG DM+ Sbjct: 236 WLTDILRGRIGFDGVIFSD--ALDMAGAAGAGTYVQRADAALAAGCDMV 282
>MYO9B_MOUSE (Q9QY06) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 2114 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 252 YHHHQHSALRMQQPSYFH-QRMAFPQNQPERHLADQ 148 YHH +HS +R+Q H QR +F Q E+ A+Q Sbjct: 1021 YHHQRHSIIRLQSLCRGHLQRRSFSQMVSEKQKAEQ 1056
>MYO9B_RAT (Q63358) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 1980 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 252 YHHHQHSALRMQQPSYFH-QRMAFPQNQPERHLADQ 148 YHH +HS +R+Q H QR +F Q E+ A+Q Sbjct: 1022 YHHQRHSIIRLQSLCRGHLQRRSFSQMMLEKQKAEQ 1057
>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Protein rutabaga) Length = 2248 Score = 29.6 bits (65), Expect = 6.0 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = -3 Query: 252 YHHHQHSALRMQQPSYFHQRMAFPQNQPERHLADQ 148 +HHH H + QQ Y H + ++ E +LAD+ Sbjct: 1954 HHHHHHQQRQQQQQRYNHVQEQEERDDTEDNLADE 1988
>DRI_DROME (Q24573) Protein dead ringer (Protein retained)| Length = 911 Score = 29.6 bits (65), Expect = 6.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 249 HHHQHSALRMQQPSYFHQRMAFPQNQPERHLADQR 145 H QHS + QQ + HQ+ Q+Q + HL QR Sbjct: 512 HQQQHSQ-QQQQQQHHHQQQQQQQSQQQHHLQQQR 545
>HR4_DROME (Q9W539) Hormone receptor 4 (dHR4)| Length = 1518 Score = 29.6 bits (65), Expect = 6.0 Identities = 23/84 (27%), Positives = 36/84 (42%) Frame = -3 Query: 264 SP*TYHHHQHSALRMQQPSYFHQRMAFPQNQPERHLADQR*VWSLTGQPLGLRCSFHSSV 85 SP HH Q + QQ + HQ+ Q Q + H + + + L LR S + Sbjct: 551 SPLLQHHQQQQQQQQQQQQHLHQQ----QQQQQHHQQQPQALALMHPASLALRNS-NRDA 605 Query: 84 PILGSLHTAIHGAKA*GIPVALTS 13 IL + + +H A G+P + S Sbjct: 606 AILFRVKSEVHQQVAAGLPHLMQS 629
>FANCA_HUMAN (O15360) Fanconi anemia group A protein (Protein FACA)| Length = 1455 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 3/98 (3%) Frame = -1 Query: 419 SDKEMVGVHFLAVPARVR---GHNSGDTSDDRIVISRHMDSHQPMGVNDCIVLVDPHKRT 249 S ++++ + R+R GHN D+S + I +++ + ++P + Sbjct: 668 SQRDVISAQVAVISERLRAVLGHNEDDSSVEISKIQLSINTPR----------LEPREHM 717 Query: 248 TITNIVLCACSNLLTSTNVWPSLRTSRNVTLQTRDECG 135 + ++ C NL+ +++V P R L R CG Sbjct: 718 AVDLLLTSFCQNLMAASSVAPPERQGPWAALFVRTMCG 755
>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like| laminin-type EGF-like and link domain-containing scavenger receptor 1) (FAS1 EGF-like and X-link domain-containing adhesion molecule 2) (Hyaluronan receptor for endocytosis) [ Length = 2551 Score = 29.3 bits (64), Expect = 7.8 Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 2/68 (2%) Frame = +3 Query: 51 RVLRCVE--TQVWGRCYESYSEDPKVVQSMTTLISGLQGDVPAGSEGRPYVGGSKKVAAC 224 +V RC + T+V C + Y D + GL G + + G K C Sbjct: 2095 KVARCSQKGTKVSCSCQKGYKGDGHSCTEIDPCADGLNGGCHEHATCK-MTGPGKHKCEC 2153 Query: 225 AKHYVGDG 248 HYVGDG Sbjct: 2154 KSHYVGDG 2161
>ASSY_CORDI (P61521) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 399 Score = 29.3 bits (64), Expect = 7.8 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 16/58 (27%) Frame = +3 Query: 66 VETQVWGRCYE----------------SYSEDPKVVQSMTTLISGLQGDVPAGSEGRP 191 ++ VWGR E SY+EDP + + +I + VP +GRP Sbjct: 176 IDQNVWGRAVETGFLEDLWNPPTKDLYSYTEDPALGNAPDEIIISFKAGVPVAIDGRP 233 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 84,485,702 Number of Sequences: 219361 Number of extensions: 1883328 Number of successful extensions: 5099 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 4841 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5080 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
