Clone Name | bags8o24 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ495776.1|HVU495776 Hordeum vulgare partial mRNA for putative phytochelatin synthetase Length = 1246 Score = 797 bits (402), Expect = 0.0 Identities = 434/441 (98%), Gaps = 3/441 (0%) Strand = Plus / Plus Query: 3 ccctgcaacacgtgtgcatgcggttgcccctcgnaaccgccggggtcctacctgcagcac 62 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 808 ccctgcaacacgtgtgcatgcggttgcccctcg-aaccgccggggtcctacctgcagcac 866 Query: 63 gactgccccatccatgctcttgccaccggnagcgctgcttgtcccgttcgacaaccgtac 122 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 867 gactgccccatccatgctcttgccaccggaggcgctgcttgtcccgttcgacaaccgtac 926 Query: 123 acagnaaggcgcaggcatgggctcaattgaagcactacaatgtgcctaggccaatgcctt 182 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 927 acag-aaggcgcaggcatgggctcaattgaagcactacaatgtgcctaggccaatgcctt 985 Query: 183 gcggtgatttctgtggtgtgagcatcaattggcatgtctcatcagacttcaacaagggct 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 986 gcggtgatttctgtggtgtgagcatcaattggcatgtctcatcagacttcaacaagggct 1045 Query: 243 ggagtgctcgggtgacattgttcaattggggcgatgtcgacatggccaactggttcgctg 302 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1046 ggagtgctcgggtgacattgttcaattggggcgatgtcgacatggccaactggttcgctg 1105 Query: 303 ccatggtcatggacaaggcgtatgat-ggatttgagaaggcatactctttcaatgcaaca 361 |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1106 ccatggtcatggacaaagcgtatgatgggatttgagaaggcatactctttcaatgcaaca 1165 Query: 362 gcagagggcaataacacaatctttatgcagggccttgaggggctcaattaccttgtgaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1166 gcagagggcaataacacaatctttatgcagggccttgaggggctcaattaccttgtgaag 1225 Query: 422 cagaccaacatgagtgggtcg 442 || |||||||||||||||||| Sbjct: 1226 caaaccaacatgagtgggtcg 1246
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 430 bits (217), Expect = e-117 Identities = 424/492 (86%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 43 cggggtcctacctgcagcacgactgccccatccatgctcttgccaccggnagcgctgctt 102 ||||||||||| |||||||||||||| | |||||||||| ||||||| | ||||||||| Sbjct: 10572540 cggggtcctacttgcagcacgactgctcaatccatgctcctgccacccgaggcgctgctt 10572599 Query: 103 gtcccgttcgacaaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaa 162 || || |||||||| || |||||| ||||| ||||||||| | |||||||||||||| Sbjct: 10572600 gtgccattcgacaatcgcacacag-aaggcattggcatgggccgagttgaagcactacaa 10572658 Query: 163 tgtgcctaggccaatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctc 222 |||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| | || Sbjct: 10572659 tgtgcctaagccaatgccttgtggtgattactgtggcgtgagcatcaattggcacatatc 10572718 Query: 223 atcagacttcaacaagggctggagtgctcgggtgacattgttcaattggggcgatgtcga 282 |||||| ||||||||||||||| |||||| |||||||||||||||||| | ||||||| Sbjct: 10572719 tacagactacaacaagggctggagcgctcggatgacattgttcaattgggacaatgtcga 10572778 Query: 283 catggccaactggttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggc 342 | |||| |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 10572779 cttggcaaactggtttgctgctattgtcatggacaaggcttatgatggttttgagaaggc 10572838 Query: 343 atactctttcaatgcaacagcagagggcaataacacaatctttatgcagggccttgaggg 402 |||||||||||| ||| ||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 10572839 gtactctttcaatagcacatcagttggcaagaacaccatcttcatgcaaggtcttgaggg 10572898 Query: 403 gctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaa 462 |||||||||||| ||||||||||||||||||||||| || || ||||| ||||| || || Sbjct: 10572899 gctcaattacctggtgaagcagaccaacatgagtggatcagactaccttgtgcctgggaa 10572958 Query: 463 gcagcaatcagtgctctcattcaccaagaagcctactcctgatattgatgttgtcgccgg 522 |||||| ||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 10572959 gcagcagtcagtgctctcattcaccaagaagctgactcctggcatcaatgttgttgctgg 10573018 Query: 523 agatgggttccc 534 |||||| ||||| Sbjct: 10573019 agatggtttccc 10573030 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 aacagcagagggcaataaca 377 |||||||||||||||||||| Sbjct: 10243923 aacagcagagggcaataaca 10243904
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0036G02, from chromosome 3, complete sequence Length = 153308 Score = 430 bits (217), Expect = e-117 Identities = 424/492 (86%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 43 cggggtcctacctgcagcacgactgccccatccatgctcttgccaccggnagcgctgctt 102 ||||||||||| |||||||||||||| | |||||||||| ||||||| | ||||||||| Sbjct: 128353 cggggtcctacttgcagcacgactgctcaatccatgctcctgccacccgaggcgctgctt 128412 Query: 103 gtcccgttcgacaaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaa 162 || || |||||||| || |||||| ||||| ||||||||| | |||||||||||||| Sbjct: 128413 gtgccattcgacaatcgcacacag-aaggcattggcatgggccgagttgaagcactacaa 128471 Query: 163 tgtgcctaggccaatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctc 222 |||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| | || Sbjct: 128472 tgtgcctaagccaatgccttgtggtgattactgtggcgtgagcatcaattggcacatatc 128531 Query: 223 atcagacttcaacaagggctggagtgctcgggtgacattgttcaattggggcgatgtcga 282 |||||| ||||||||||||||| |||||| |||||||||||||||||| | ||||||| Sbjct: 128532 tacagactacaacaagggctggagcgctcggatgacattgttcaattgggacaatgtcga 128591 Query: 283 catggccaactggttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggc 342 | |||| |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 128592 cttggcaaactggtttgctgctattgtcatggacaaggcttatgatggttttgagaaggc 128651 Query: 343 atactctttcaatgcaacagcagagggcaataacacaatctttatgcagggccttgaggg 402 |||||||||||| ||| ||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 128652 gtactctttcaatagcacatcagttggcaagaacaccatcttcatgcaaggtcttgaggg 128711 Query: 403 gctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaa 462 |||||||||||| ||||||||||||||||||||||| || || ||||| ||||| || || Sbjct: 128712 gctcaattacctggtgaagcagaccaacatgagtggatcagactaccttgtgcctgggaa 128771 Query: 463 gcagcaatcagtgctctcattcaccaagaagcctactcctgatattgatgttgtcgccgg 522 |||||| ||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 128772 gcagcagtcagtgctctcattcaccaagaagctgactcctggcatcaatgttgttgctgg 128831 Query: 523 agatgggttccc 534 |||||| ||||| Sbjct: 128832 agatggtttccc 128843
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 430 bits (217), Expect = e-117 Identities = 424/492 (86%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 43 cggggtcctacctgcagcacgactgccccatccatgctcttgccaccggnagcgctgctt 102 ||||||||||| |||||||||||||| | |||||||||| ||||||| | ||||||||| Sbjct: 10570641 cggggtcctacttgcagcacgactgctcaatccatgctcctgccacccgaggcgctgctt 10570700 Query: 103 gtcccgttcgacaaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaa 162 || || |||||||| || |||||| ||||| ||||||||| | |||||||||||||| Sbjct: 10570701 gtgccattcgacaatcgcacacag-aaggcattggcatgggccgagttgaagcactacaa 10570759 Query: 163 tgtgcctaggccaatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctc 222 |||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| | || Sbjct: 10570760 tgtgcctaagccaatgccttgtggtgattactgtggcgtgagcatcaattggcacatatc 10570819 Query: 223 atcagacttcaacaagggctggagtgctcgggtgacattgttcaattggggcgatgtcga 282 |||||| ||||||||||||||| |||||| |||||||||||||||||| | ||||||| Sbjct: 10570820 tacagactacaacaagggctggagcgctcggatgacattgttcaattgggacaatgtcga 10570879 Query: 283 catggccaactggttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggc 342 | |||| |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 10570880 cttggcaaactggtttgctgctattgtcatggacaaggcttatgatggttttgagaaggc 10570939 Query: 343 atactctttcaatgcaacagcagagggcaataacacaatctttatgcagggccttgaggg 402 |||||||||||| ||| ||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 10570940 gtactctttcaatagcacatcagttggcaagaacaccatcttcatgcaaggtcttgaggg 10570999 Query: 403 gctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaa 462 |||||||||||| ||||||||||||||||||||||| || || ||||| ||||| || || Sbjct: 10571000 gctcaattacctggtgaagcagaccaacatgagtggatcagactaccttgtgcctgggaa 10571059 Query: 463 gcagcaatcagtgctctcattcaccaagaagcctactcctgatattgatgttgtcgccgg 522 |||||| ||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 10571060 gcagcagtcagtgctctcattcaccaagaagctgactcctggcatcaatgttgttgctgg 10571119 Query: 523 agatgggttccc 534 |||||| ||||| Sbjct: 10571120 agatggtttccc 10571131 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 aacagcagagggcaataaca 377 |||||||||||||||||||| Sbjct: 10242024 aacagcagagggcaataaca 10242005
>dbj|AK119578.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-B09, full insert sequence Length = 2353 Score = 430 bits (217), Expect = e-117 Identities = 424/492 (86%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 43 cggggtcctacctgcagcacgactgccccatccatgctcttgccaccggnagcgctgctt 102 ||||||||||| |||||||||||||| | |||||||||| ||||||| | ||||||||| Sbjct: 1414 cggggtcctacttgcagcacgactgctcaatccatgctcctgccacccgaggcgctgctt 1473 Query: 103 gtcccgttcgacaaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaa 162 || || |||||||| || |||||| ||||| ||||||||| | |||||||||||||| Sbjct: 1474 gtgccattcgacaatcgcacacag-aaggcattggcatgggccgagttgaagcactacaa 1532 Query: 163 tgtgcctaggccaatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctc 222 |||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| | || Sbjct: 1533 tgtgcctaagccaatgccttgtggtgattactgtggcgtgagcatcaattggcacatatc 1592 Query: 223 atcagacttcaacaagggctggagtgctcgggtgacattgttcaattggggcgatgtcga 282 |||||| ||||||||||||||| |||||| |||||||||||||||||| | ||||||| Sbjct: 1593 tacagactacaacaagggctggagcgctcggatgacattgttcaattgggacaatgtcga 1652 Query: 283 catggccaactggttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggc 342 | |||| |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 1653 cttggcaaactggtttgctgctattgtcatggacaaggcttatgatggttttgagaaggc 1712 Query: 343 atactctttcaatgcaacagcagagggcaataacacaatctttatgcagggccttgaggg 402 |||||||||||| ||| ||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 1713 gtactctttcaatagcacatcagttggcaagaacaccatcttcatgcaaggtcttgaggg 1772 Query: 403 gctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaa 462 |||||||||||| ||||||||||||||||||||||| || || ||||| ||||| || || Sbjct: 1773 gctcaattacctggtgaagcagaccaacatgagtggatcagactaccttgtgcctgggaa 1832 Query: 463 gcagcaatcagtgctctcattcaccaagaagcctactcctgatattgatgttgtcgccgg 522 |||||| ||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 1833 gcagcagtcagtgctctcattcaccaagaagctgactcctggcatcaatgttgttgctgg 1892 Query: 523 agatgggttccc 534 |||||| ||||| Sbjct: 1893 agatggtttccc 1904
>dbj|AK065552.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027D03, full insert sequence Length = 2249 Score = 430 bits (217), Expect = e-117 Identities = 424/492 (86%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 43 cggggtcctacctgcagcacgactgccccatccatgctcttgccaccggnagcgctgctt 102 ||||||||||| |||||||||||||| | |||||||||| ||||||| | ||||||||| Sbjct: 1277 cggggtcctacttgcagcacgactgctcaatccatgctcctgccacccgaggcgctgctt 1336 Query: 103 gtcccgttcgacaaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaa 162 || || |||||||| || |||||| ||||| ||||||||| | |||||||||||||| Sbjct: 1337 gtgccattcgacaatcgcacacag-aaggcattggcatgggccgagttgaagcactacaa 1395 Query: 163 tgtgcctaggccaatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctc 222 |||||||| |||||||||||| ||||||| |||||| ||||||||||||||||| | || Sbjct: 1396 tgtgcctaagccaatgccttgtggtgattactgtggcgtgagcatcaattggcacatatc 1455 Query: 223 atcagacttcaacaagggctggagtgctcgggtgacattgttcaattggggcgatgtcga 282 |||||| ||||||||||||||| |||||| |||||||||||||||||| | ||||||| Sbjct: 1456 tacagactacaacaagggctggagcgctcggatgacattgttcaattgggacaatgtcga 1515 Query: 283 catggccaactggttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggc 342 | |||| |||||||| ||||| || |||||||||||||| |||||||| ||||||||||| Sbjct: 1516 cttggcaaactggtttgctgctattgtcatggacaaggcttatgatggttttgagaaggc 1575 Query: 343 atactctttcaatgcaacagcagagggcaataacacaatctttatgcagggccttgaggg 402 |||||||||||| ||| ||| ||||| ||||| ||||| ||||| || |||||||| Sbjct: 1576 gtactctttcaatagcacatcagttggcaagaacaccatcttcatgcaaggtcttgaggg 1635 Query: 403 gctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaa 462 |||||||||||| ||||||||||||||||||||||| || || ||||| ||||| || || Sbjct: 1636 gctcaattacctggtgaagcagaccaacatgagtggatcagactaccttgtgcctgggaa 1695 Query: 463 gcagcaatcagtgctctcattcaccaagaagcctactcctgatattgatgttgtcgccgg 522 |||||| ||||||||||||||||||||||||| ||||||| || ||||||| || || Sbjct: 1696 gcagcagtcagtgctctcattcaccaagaagctgactcctggcatcaatgttgttgctgg 1755 Query: 523 agatgggttccc 534 |||||| ||||| Sbjct: 1756 agatggtttccc 1767
>gb|AY265855.1| Zea mays roothairless 3 (rth3) gene, complete cds Length = 3152 Score = 391 bits (197), Expect = e-105 Identities = 380/440 (86%), Gaps = 1/440 (0%) Strand = Plus / Plus Query: 55 tgcagcacgactgccccatccatgctcttgccaccggnagcgctgcttgtcccgttcgac 114 |||||||| || || | ||||||||| ||||||||| ||||||||||| || |||||| Sbjct: 1969 tgcagcaccaccgcacaatccatgctgctgccaccggaggcgctgcttgtgccattcgac 2028 Query: 115 aaccgtacacagnaaggcgcaggcatgggctcaattgaagcactacaatgtgcctaggcc 174 ||||| ||||| |||||| ||| |||||| | ||||||| ||||||||||| |||| Sbjct: 2029 aaccggtcacag-aaggcgttggcgtgggctgagctgaagcattacaatgtgccccggcc 2087 Query: 175 aatgccttgcggtgatttctgtggtgtgagcatcaattggcatgtctcatcagacttcaa 234 |||||||||||||| || ||||| |||||||||||||||||||||||| | |||| ||| Sbjct: 2088 gatgccttgcggtgacttttgtggcgtgagcatcaattggcatgtctcaacggactacaa 2147 Query: 235 caagggctggagtgctcgggtgacattgttcaattggggcgatgtcgacatggccaactg 294 |||||||||||| |||||||||||||||||||| |||| ||||||||||||||||| || Sbjct: 2148 caagggctggagcgctcgggtgacattgttcaactgggaggatgtcgacatggccaattg 2207 Query: 295 gttcgctgccatggtcatggacaaggcgtatgatggatttgagaaggcatactctttcaa 354 ||| |||||||| |||||||||||||||||||| || ||||||||||| ||||| ||||| Sbjct: 2208 gtttgctgccatcgtcatggacaaggcgtatgacggctttgagaaggcttactcgttcaa 2267 Query: 355 tgcaacagcagagggcaataacacaatctttatgcagggccttgaggggctcaattacct 414 | || |||| |||||| ||||| |||||||||||||| || |||||||| |||||||| Sbjct: 2268 cggcaccgcagtgggcaagaacacgatctttatgcagggtctggaggggcttaattacct 2327 Query: 415 tgtgaagcagaccaacatgagtgggtcggattacctcgtgccgggaaagcagcaatcagt 474 |||||||||||||||||||||||||| || ||||| || || || ||||| || ||||| Sbjct: 2328 ggtgaagcagaccaacatgagtgggtccgactaccttgttcctggcaagcaacagtcagt 2387 Query: 475 gctctcattcaccaagaagc 494 ||||||||||||||||||| Sbjct: 2388 cctctcattcaccaagaagc 2407
>gb|AY112035.1| Zea mays CL28146_1 mRNA sequence Length = 663 Score = 180 bits (91), Expect = 3e-42 Identities = 166/191 (86%) Strand = Plus / Minus Query: 275 gatgtcgacatggccaactggttcgctgccatggtcatggacaaggcgtatgatggattt 334 ||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || ||| Sbjct: 639 gatgtcgacatggccaattggtttgctgccatcgtcatggacaaggcgtatgacggcttt 580 Query: 335 gagaaggcatactctttcaatgcaacagcagagggcaataacacaatctttatgcagggc 394 |||||||| ||||| ||||| | || |||| |||||| ||||| |||||||||||||| Sbjct: 579 gagaaggcgtactcgttcaacggcactgcagtgggcaagaacacgatctttatgcagggt 520 Query: 395 cttgaggggctcaattaccttgtgaagcagaccaacatgagtgggtcggattacctcgtg 454 || |||||||| |||||||| ||||||||||| |||||||| ||||| || ||||| ||| Sbjct: 519 ctggaggggcttaattacctggtgaagcagactaacatgagcgggtccgactaccttgtg 460 Query: 455 ccgggaaagca 465 || || ||||| Sbjct: 459 cctggcaagca 449
>ref|XM_610571.2| PREDICTED: Bos taurus similar to paraneoplastic antigen MA1 (LOC532062), partial mRNA Length = 1086 Score = 48.1 bits (24), Expect = 0.030 Identities = 24/24 (100%) Strand = Plus / Minus Query: 294 ggttcgctgccatggtcatggaca 317 |||||||||||||||||||||||| Sbjct: 28 ggttcgctgccatggtcatggaca 5
>gb|AC139562.8| Mus musculus chromosome 5, clone RP24-180G11, complete sequence Length = 168158 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ccctgcaacacgtgtgcatgc 23 ||||||||||||||||||||| Sbjct: 45654 ccctgcaacacgtgtgcatgc 45674
>ref|XM_753888.1| Ustilago maydis 521 hypothetical protein (UM02834.1) partial mRNA Length = 3756 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 272 ggcgatgtcgacatggccaac 292 ||||||||||||||||||||| Sbjct: 2113 ggcgatgtcgacatggccaac 2133
>gb|AC159539.6| Mus musculus chromosome 5, clone RP23-228F6, complete sequence Length = 238599 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ccctgcaacacgtgtgcatgc 23 ||||||||||||||||||||| Sbjct: 209215 ccctgcaacacgtgtgcatgc 209235
>emb|Z28383.1|TISACYS T.niveum (ATCC34921) simA gene for cyclosporine synthetase Length = 46899 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 412 ccttgtgaagcagaccaacat 432 ||||||||||||||||||||| Sbjct: 6116 ccttgtgaagcagaccaacat 6136
>gb|AC138265.9| Mus musculus chromosome 5, clone RP23-41J13, complete sequence Length = 172279 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ctctttcaatgcaacagcag 365 |||||||||||||||||||| Sbjct: 27808 ctctttcaatgcaacagcag 27827
>gb|AC140302.2| Mus musculus BAC clone RP24-321I14 from chromosome 5, complete sequence Length = 174372 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 ctctttcaatgcaacagcag 365 |||||||||||||||||||| Sbjct: 159787 ctctttcaatgcaacagcag 159768
>ref|XM_445461.1| Candida glabrata CBS138, CAGL0D01078g partial mRNA Length = 2721 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 catggccaactggttcgctg 302 |||||||||||||||||||| Sbjct: 2596 catggccaactggttcgctg 2577
>gb|AC164403.5| Mus musculus chromosome 7, clone RP23-477O13, complete sequence Length = 191303 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gatggatttgagaaggcata 345 |||||||||||||||||||| Sbjct: 145098 gatggatttgagaaggcata 145079
>gb|AC112129.4| Homo sapiens 3 BAC RP11-25L9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 163621 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 468 aatcagtgctctcattcacc 487 |||||||||||||||||||| Sbjct: 49751 aatcagtgctctcattcacc 49770
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 catggccaactggttcgctg 302 |||||||||||||||||||| Sbjct: 125959 catggccaactggttcgctg 125978
>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0068A07, from Chromosome 10, complete sequence Length = 154505 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gccggagatgggttcccaac 537 |||||||||||||||||||| Sbjct: 30478 gccggagatgggttcccaac 30459
>gb|AC013251.19| Homo sapiens 3 BAC RP11-38P22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 176251 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcagtgctctcattcaccaa 489 |||||||||||||||||||| Sbjct: 70906 tcagtgctctcattcaccaa 70887
>gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045E22, from chromosome 3, complete sequence Length = 160920 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 aacagcagagggcaataaca 377 |||||||||||||||||||| Sbjct: 105336 aacagcagagggcaataaca 105317
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 atgcaacagcagagggcaataaca 377 ||||||||||||| |||||||||| Sbjct: 3675841 atgcaacagcagatggcaataaca 3675864
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gccggagatgggttcccaac 537 |||||||||||||||||||| Sbjct: 12509053 gccggagatgggttcccaac 12509034
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gtgcctaggccaatgccttg 183 |||||||||||||||||||| Sbjct: 21713327 gtgcctaggccaatgccttg 21713308
>dbj|AP006069.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0025F02 Length = 156545 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gtgcctaggccaatgccttg 183 |||||||||||||||||||| Sbjct: 94724 gtgcctaggccaatgccttg 94705
>dbj|AP005835.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0008E01 Length = 156856 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gtgcctaggccaatgccttg 183 |||||||||||||||||||| Sbjct: 5726 gtgcctaggccaatgccttg 5707
>gb|U27612.2|SVU27612 Stealth virus 1 clone 3B23 Length = 8916 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 gcaggcatgggctcaattga 152 |||||||||||||||||||| Sbjct: 1563 gcaggcatgggctcaattga 1582
>gb|AC102758.10| Mus musculus chromosome 7, clone RP24-200F21, complete sequence Length = 181057 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 gatggatttgagaaggcata 345 |||||||||||||||||||| Sbjct: 80557 gatggatttgagaaggcata 80538
>gb|AC158587.3| Mus musculus chromosome 7, clone RP24-156F13, complete sequence Length = 152262 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 gatggatttgagaaggcata 345 |||||||||||||||||||| Sbjct: 111943 gatggatttgagaaggcata 111962
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gccggagatgggttcccaac 537 |||||||||||||||||||| Sbjct: 12516393 gccggagatgggttcccaac 12516374
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 354 atgcaacagcagagggcaataaca 377 ||||||||||||| |||||||||| Sbjct: 3675815 atgcaacagcagatggcaataaca 3675838
>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104421 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 atgcaacagcagagggcaataaca 377 ||||||||||||| |||||||||| Sbjct: 73832 atgcaacagcagatggcaataaca 73809
>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 122128 Score = 40.1 bits (20), Expect = 7.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 354 atgcaacagcagagggcaataaca 377 ||||||||||||| |||||||||| Sbjct: 13558 atgcaacagcagatggcaataaca 13535
>emb|AJ006945.1|HSA569 Human P2Y1 gene Length = 16178 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 tcagtgctctcattcaccaa 489 |||||||||||||||||||| Sbjct: 14477 tcagtgctctcattcaccaa 14458
>emb|AL732588.6| Mouse DNA sequence from clone RP24-159M19 on chromosome 2, complete sequence Length = 91977 Score = 40.1 bits (20), Expect = 7.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gcagggccttgaggggctca 407 |||||||||||||||||||| Sbjct: 43028 gcagggccttgaggggctca 43047 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,305,189 Number of Sequences: 3902068 Number of extensions: 4305189 Number of successful extensions: 64113 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 36 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 63906 Number of HSP's gapped (non-prelim): 188 length of query: 539 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 516 effective length of database: 17,143,297,704 effective search space: 8845941615264 effective search space used: 8845941615264 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)