ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8o19 |
|---|---|
| Clone Library Name | barley_pub |
>GUN1_PERAE (P05522) Endoglucanase 1 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase 1) Length = 494 Score = 65.9 bits (159), Expect(2) = 1e-16 Identities = 44/117 (37%), Positives = 59/117 (50%), Gaps = 5/117 (4%) Frame = +3 Query: 207 SRXIIKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPN-DHYCWMRPEDIDYKRPV 383 +R ++W TDY+LK +S T + + QVG PN DH CW RPED+D R V Sbjct: 115 ARAALRWSTDYLLK---ASTATSNSLYVQVGE--------PNADHRCWERPEDMDTPRNV 163 Query: 384 IEC---HSCSDXXXXXXXXXXXXSIVFKDS-KAYSDKLVHGAKALYKFGRLQRGRYS 542 + + SD SIVF DS +YS KL+H A +++F RG YS Sbjct: 164 YKVSTQNPGSDVAAETAAALAAASIVFGDSDSSYSTKLLHTAVKVFEFADQYRGSYS 220 Score = 39.7 bits (91), Expect(2) = 1e-16 Identities = 15/24 (62%), Positives = 20/24 (83%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KF PMA++ TML+W Sbjct: 76 GYYDAGDNLKFGLPMAFTTTMLAW 99
>GUN9_ARATH (Q9C9H5) Probable family 9 endoglucanase At1g71380 precursor (EC| 3.2.1.4) Length = 484 Score = 56.2 bits (134), Expect(2) = 1e-15 Identities = 43/118 (36%), Positives = 57/118 (48%), Gaps = 6/118 (5%) Frame = +3 Query: 207 SRXIIKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPN-DHYCWMRPEDIDYKRPV 383 +R I+W TDY+LK ++ + VGVGD PN DH CW RPED+D R V Sbjct: 110 ARVNIRWATDYLLKCARATPGKL-----YVGVGD------PNVDHKCWERPEDMDTPRTV 158 Query: 384 IECHSC---SDXXXXXXXXXXXXSIVFK--DSKAYSDKLVHGAKALYKFGRLQRGRYS 542 + SD S+VF+ DSK YS L+ AK + +F +G YS Sbjct: 159 YSVSASNPGSDVAAETAAALAAASMVFRKVDSK-YSRLLLATAKDVMQFAIQYQGAYS 215 Score = 45.8 bits (107), Expect(2) = 1e-15 Identities = 20/38 (52%), Positives = 26/38 (68%) Frame = +1 Query: 40 GLSASTVKXXAWSXGFYDAGDAIKFNYPMAWSMTMLSW 153 GLS + + G+YDAGD +KFN PMA++ TMLSW Sbjct: 57 GLSDGSAAHVDLTGGYYDAGDNVKFNLPMAFTTTMLSW 94
>GUN_PHAVU (P22503) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Abscission cellulase) Length = 496 Score = 58.2 bits (139), Expect(2) = 5e-15 Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 4/112 (3%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIECHS 398 I+WG D+ML+ S + QVG G+ DH CW RPED+D R V + + Sbjct: 132 IRWGADFMLRAHTSPTT----LYTQVGDGNA-------DHNCWERPEDMDTPRTVYKIDA 180 Query: 399 CS---DXXXXXXXXXXXXSIVFKDSKA-YSDKLVHGAKALYKFGRLQRGRYS 542 S + SIVFK A YS L+ +K+L+ F RG YS Sbjct: 181 NSPGTEVAAEYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYS 232 Score = 42.0 bits (97), Expect(2) = 5e-15 Identities = 15/33 (45%), Positives = 24/33 (72%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSWXGDRVQGQV 180 G+YDAGD +KF +PMA+S ++LSW + ++ Sbjct: 87 GYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEI 119
>GUN4_THEFU (P26221) Endoglucanase E-4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase E-4) (Cellulase E-4) (Cellulase E4) Length = 880 Score = 45.8 bits (107), Expect(2) = 3e-11 Identities = 38/112 (33%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIECH- 395 ++W DY +K S + + QVG GD DH W E + +RP + Sbjct: 143 LRWVNDYFIKAHPSP----NVLYVQVGDGDA-------DHKWWGPAEVMPMERPSFKVDP 191 Query: 396 SC--SDXXXXXXXXXXXXSIVFKDSK-AYSDKLVHGAKALYKFGRLQRGRYS 542 SC SD SIVF D AY+ LV AK LY F RG YS Sbjct: 192 SCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYS 243 Score = 41.2 bits (95), Expect(2) = 3e-11 Identities = 17/35 (48%), Positives = 26/35 (74%), Gaps = 1/35 (2%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSWXG-DRVQGQVR 183 G+YDAGD +KF +PMA++ TML+W + +G +R Sbjct: 98 GWYDAGDHVKFGFPMAFTATMLAWGAIESPEGYIR 132
>GUN6_DICDI (P22699) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Spore germination protein 270-6) (Cellulase) Length = 705 Score = 43.9 bits (102), Expect(2) = 9e-11 Identities = 17/26 (65%), Positives = 21/26 (80%) Frame = +1 Query: 76 SXGFYDAGDAIKFNYPMAWSMTMLSW 153 S G++DAGD +KF PMA+SMTML W Sbjct: 77 SGGYFDAGDGVKFGLPMAYSMTMLGW 102 Score = 41.6 bits (96), Expect(2) = 9e-11 Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 5/113 (4%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVA-QVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIECH 395 IK+GTD+++ +A T D A QVG G+ DH W PED+ RP Sbjct: 124 IKYGTDWLI-----AAHTADNEFAGQVGDGNV-------DHSWWGPPEDMTMARPTYMLT 171 Query: 396 S---CSDXXXXXXXXXXXXSIVFKDSK-AYSDKLVHGAKALYKFGRLQRGRYS 542 + ++ SI FK S Y+ + AK L+ FG RG YS Sbjct: 172 TEAPGTEIAMEAASALAAASIAFKSSNPTYAATCLAHAKTLHNFGYTYRGVYS 224
>GUN4_BACS5 (P28622) Endoglucanase 4 precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase 4) (Cellulase 4) (EG-IV) Length = 636 Score = 46.2 bits (108), Expect(2) = 3e-10 Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 4/112 (3%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIECHS 398 IKW TDY LK + AQVG G+ DH W E + RP + Sbjct: 121 IKWATDYFLKAHTGP----NEFWAQVGDGNA-------DHGWWGPAEVMPMNRPAFKIDE 169 Query: 399 -C--SDXXXXXXXXXXXXSIVFKDSKA-YSDKLVHGAKALYKFGRLQRGRYS 542 C ++ SI+FK++ A Y+ KL+ AK LY F RG Y+ Sbjct: 170 HCPGTEVAAQTAAALAAGSIIFKETDAPYAAKLLTHAKQLYAFADQYRGEYT 221 Score = 37.4 bits (85), Expect(2) = 3e-10 Identities = 14/24 (58%), Positives = 19/24 (79%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KF PMA+S +L+W Sbjct: 76 GWYDAGDHVKFGLPMAYSAAVLAW 99
>GUNB_CELFI (P26225) Endoglucanase B precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase B) (Cellulase B) Length = 1045 Score = 42.0 bits (97), Expect(2) = 3e-09 Identities = 16/24 (66%), Positives = 21/24 (87%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KF +PMA+S TML+W Sbjct: 85 GWYDAGDHVKFGFPMAFSATMLAW 108 Score = 38.5 bits (88), Expect(2) = 3e-09 Identities = 34/112 (30%), Positives = 47/112 (41%), Gaps = 4/112 (3%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIECH- 395 +++ +DY +K + + + QVG G+ DH W E + RP + Sbjct: 130 LRFVSDYFVKAHTAP----NELYVQVGDGEA-------DHKWWGPAEVMTMARPSHKISA 178 Query: 396 SC--SDXXXXXXXXXXXXSIVFK-DSKAYSDKLVHGAKALYKFGRLQRGRYS 542 SC SD +IV K D AY+ LV AK LY F RG YS Sbjct: 179 SCPGSDVAAETAAALASSAIVLKGDDPAYAATLVSHAKQLYTFADTYRGAYS 230
>GUNF_CLOTM (P26224) Endoglucanase F precursor (EC 3.2.1.4) (EGF)| (Endo-1,4-beta-glucanase) (Cellulase F) Length = 739 Score = 42.7 bits (99), Expect(2) = 5e-07 Identities = 16/24 (66%), Positives = 22/24 (91%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KFN PMA+++TML+W Sbjct: 78 GWYDAGDHVKFNLPMAYAVTMLAW 101 Score = 30.0 bits (66), Expect(2) = 5e-07 Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 4/108 (3%) Frame = +3 Query: 219 IKWGTDYMLKTFNSSADTIDRIVAQVGVGDTSKGPMPNDHYCWMRPEDIDYKRPVIE--- 389 IKW TDY +K S + QVG G DH W E + RP + Sbjct: 123 IKWATDYFIKCHPSP----NVYYYQVGDGAL-------DHSWWGPAEVMQMPRPSFKVDL 171 Query: 390 CHSCSDXXXXXXXXXXXXSIVFKDS-KAYSDKLVHGAKALYKFGRLQR 530 + S SIVFK + Y+ L+ AK L+ F R Sbjct: 172 TNPGSTVVAETAAAMAASSIVFKPTDPEYAATLLRHAKELFTFADTTR 219
>GUNZ_CLOSR (P23659) Endoglucanase Z precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Thermoactive cellulase) (Avicelase I) Length = 986 Score = 43.5 bits (101), Expect = 4e-04 Identities = 17/24 (70%), Positives = 21/24 (87%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KFN PMA+S TML+W Sbjct: 78 GWYDAGDHVKFNLPMAYSQTMLAW 101
>GUNX_PRUPE (P38534) Endoglucanase CX (EC 3.2.1.4) (Endo-1,4-beta-glucanase)| (CX-cellulase) (Fragment) Length = 251 Score = 40.0 bits (92), Expect = 0.004 Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 4/67 (5%) Frame = +3 Query: 354 PEDIDYKRPVIECHSC---SDXXXXXXXXXXXXSIVFKDSK-AYSDKLVHGAKALYKFGR 521 PED+D R V + + SD SIVFKDS +YS KL+H A ++ F Sbjct: 1 PEDMDTPRNVYKVSTQNPGSDVAAETAAALAAASIVFKDSDPSYSGKLLHTAMKVFDFAD 60 Query: 522 LQRGRYS 542 RG YS Sbjct: 61 RYRGSYS 67
>GUNA_CALSA (P22534) Endoglucanase A precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase A) (Cellulase A) Length = 1742 Score = 39.7 bits (91), Expect = 0.006 Identities = 15/24 (62%), Positives = 21/24 (87%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G++DAGD +KFN PM+++ TMLSW Sbjct: 74 GWFDAGDHVKFNLPMSYTGTMLSW 97
>GUNI_CLOTM (Q02934) Endoglucanase 1 precursor (EC 3.2.1.4) (Endoglucanase I)| (EGI) (Endo-1,4-beta-glucanase) (Cellulase I) Length = 879 Score = 39.7 bits (91), Expect = 0.006 Identities = 15/24 (62%), Positives = 19/24 (79%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KFN PM++S ML W Sbjct: 125 GWYDAGDHVKFNLPMSYSAAMLGW 148
>GUNG_CLOCE (P37700) Endoglucanase G precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase G) (Cellulase G) (EGCCG) Length = 725 Score = 38.9 bits (89), Expect = 0.010 Identities = 14/24 (58%), Positives = 20/24 (83%) Frame = +1 Query: 82 GFYDAGDAIKFNYPMAWSMTMLSW 153 G+YDAGD +KFN PM+++ ML+W Sbjct: 87 GWYDAGDHVKFNLPMSYTSAMLAW 110 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,386,966 Number of Sequences: 219361 Number of extensions: 961617 Number of successful extensions: 2553 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2546 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4585734400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
