Clone Name | bags8o18 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_192312.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1227 Score = 414 bits (209), Expect = e-112 Identities = 344/389 (88%) Strand = Plus / Plus Query: 200 tggggattggccattgcgcccgcaccgtcgaccactcttgttccggttgtcaggagccgt 259 ||||||||| |||||||| |||||||| |||||||| || ||||| | | || ||| || Sbjct: 142 tggggattgaccattgcgtccgcaccggcgaccactgctgctccggctctgagaagctgt 201 Query: 260 caaattttctgcaaggcagaagctaacatttctagtaacctgccagcgagcgggcctact 319 ||| | || |||||||| ||||||||||| || ||||| ||||||| |||| |||| | Sbjct: 202 caactattgtgcaaggctgaagctaacatatccagtaatctgccagagagcattcctagt 261 Query: 320 ggagcaagccagtacgagaaaatagttgagctactcaccactcttttccctgtctgggtc 379 | ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 262 gaagcaaaccagtacgagaaaatagttgagctgcttaccactcttttccctgtctgggtc 321 Query: 380 atattaggtacagttattggcatctacaagccgtcaatggtcacctggttggagactgat 439 ||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 322 atattaggtaccattattggcatctacaagccatcgatggttacctggttggagactgat 381 Query: 440 ctttttactctgggcctaggattcctaatgctgtcaatgggactaacattgacatttgaa 499 ||||| ||| |||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 382 cttttcactgtgggcctaggattcctaatgctatcaatgggactaacattgaccttcgaa 441 Query: 500 gatttcaggagatgtttaaggaatccatggacagttggtgtgggatttcttgcgcaatat 559 |||||||||||||| | |||||||||||||| || |||||||||||||||||||| ||| Sbjct: 442 gatttcaggagatgcatgaggaatccatggactgtgggtgtgggatttcttgcgcagtat 501 Query: 560 ttgatcaaacctatgctaggatatgctat 588 ||||||||||||||||| |||| |||||| Sbjct: 502 ttgatcaaacctatgctgggatttgctat 530 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 77 atggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||| ||||||||||| || |||||||||||||||| Sbjct: 1 atggcgtccgtctcccgagccctccgcccgcggccgc 37
>dbj|AK069337.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F07, full insert sequence Length = 1887 Score = 414 bits (209), Expect = e-112 Identities = 344/389 (88%) Strand = Plus / Plus Query: 200 tggggattggccattgcgcccgcaccgtcgaccactcttgttccggttgtcaggagccgt 259 ||||||||| |||||||| |||||||| |||||||| || ||||| | | || ||| || Sbjct: 473 tggggattgaccattgcgtccgcaccggcgaccactgctgctccggctctgagaagctgt 532 Query: 260 caaattttctgcaaggcagaagctaacatttctagtaacctgccagcgagcgggcctact 319 ||| | || |||||||| ||||||||||| || ||||| ||||||| |||| |||| | Sbjct: 533 caactattgtgcaaggctgaagctaacatatccagtaatctgccagagagcattcctagt 592 Query: 320 ggagcaagccagtacgagaaaatagttgagctactcaccactcttttccctgtctgggtc 379 | ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 593 gaagcaaaccagtacgagaaaatagttgagctgcttaccactcttttccctgtctgggtc 652 Query: 380 atattaggtacagttattggcatctacaagccgtcaatggtcacctggttggagactgat 439 ||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 653 atattaggtaccattattggcatctacaagccatcgatggttacctggttggagactgat 712 Query: 440 ctttttactctgggcctaggattcctaatgctgtcaatgggactaacattgacatttgaa 499 ||||| ||| |||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 713 cttttcactgtgggcctaggattcctaatgctatcaatgggactaacattgaccttcgaa 772 Query: 500 gatttcaggagatgtttaaggaatccatggacagttggtgtgggatttcttgcgcaatat 559 |||||||||||||| | |||||||||||||| || |||||||||||||||||||| ||| Sbjct: 773 gatttcaggagatgcatgaggaatccatggactgtgggtgtgggatttcttgcgcagtat 832 Query: 560 ttgatcaaacctatgctaggatatgctat 588 ||||||||||||||||| |||| |||||| Sbjct: 833 ttgatcaaacctatgctgggatttgctat 861 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 73 ctccatggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 328 ctccatggcgtccgtctcccgagccctccgcccgcggccgc 368
>dbj|AK104932.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-B10, full insert sequence Length = 1616 Score = 406 bits (205), Expect = e-110 Identities = 343/389 (88%) Strand = Plus / Plus Query: 200 tggggattggccattgcgcccgcaccgtcgaccactcttgttccggttgtcaggagccgt 259 ||||||||| |||||||| |||||||| |||||||| || ||||| | | || ||| || Sbjct: 229 tggggattgaccattgcgtccgcaccggcgaccactgctgctccggctctgagaagctgt 288 Query: 260 caaattttctgcaaggcagaagctaacatttctagtaacctgccagcgagcgggcctact 319 ||| | || |||||||| ||||||| ||| || ||||| ||||||| |||| |||| | Sbjct: 289 caactattgtgcaaggctgaagctagcatatccagtaatctgccagagagcattcctagt 348 Query: 320 ggagcaagccagtacgagaaaatagttgagctactcaccactcttttccctgtctgggtc 379 | ||||| |||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 349 gaagcaaaccagtacgagaaaatagttgagctgcttaccactcttttccctgtctgggtc 408 Query: 380 atattaggtacagttattggcatctacaagccgtcaatggtcacctggttggagactgat 439 ||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 409 atattaggtaccattattggcatctacaagccatcgatggttacctggttggagactgat 468 Query: 440 ctttttactctgggcctaggattcctaatgctgtcaatgggactaacattgacatttgaa 499 ||||| ||| |||||||||||||||||||||| |||||||||||||||||||| || ||| Sbjct: 469 cttttcactgtgggcctaggattcctaatgctatcaatgggactaacattgaccttcgaa 528 Query: 500 gatttcaggagatgtttaaggaatccatggacagttggtgtgggatttcttgcgcaatat 559 |||||||||||||| | |||||||||||||| || |||||||||||||||||||| ||| Sbjct: 529 gatttcaggagatgcatgaggaatccatggactgtgggtgtgggatttcttgcgcagtat 588 Query: 560 ttgatcaaacctatgctaggatatgctat 588 ||||||||||||||||| |||| |||||| Sbjct: 589 ttgatcaaacctatgctgggatttgctat 617 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 73 ctccatggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 84 ctccatggcgtccgtctcccgagccctccgcccgcggccgc 124
>gb|AY581831.1| Cynodon dactylon unknown mRNA Length = 660 Score = 262 bits (132), Expect = 1e-66 Identities = 231/264 (87%) Strand = Plus / Plus Query: 325 aagccagtacgagaaaatagttgagctactcaccactcttttccctgtctgggtcatatt 384 ||||||||| |||||| |||||||||| || ||||||||||||||||||||||||||| | Sbjct: 109 aagccagtatgagaaagtagttgagctgcttaccactcttttccctgtctgggtcatact 168 Query: 385 aggtacagttattggcatctacaagccgtcaatggtcacctggttggagactgatctttt 444 |||||| ||||||||||||||||||| |||||||| ||||||||||| || || ||||| Sbjct: 169 gggtacaattattggcatctacaagccatcaatggttacctggttggaaaccgacctttt 228 Query: 445 tactctgggcctaggattcctaatgctgtcaatgggactaacattgacatttgaagattt 504 ||||| ||| |||| ||||||||| |||| ||||||||||| ||||||||||| ||||| Sbjct: 229 cactcttggcttaggcttcctaatgttgtcgatgggactaactttgacatttgatgattt 288 Query: 505 caggagatgtttaaggaatccatggacagttggtgtgggatttcttgcgcaatatttgat 564 | ||||||||| || |||||||||||||| |||||||||||| | || || |||||||| Sbjct: 289 taagagatgtttgagaaatccatggacagtgggtgtgggatttgtcgcacagtatttgat 348 Query: 565 caaacctatgctaggatatgctat 588 ||||||| || | |||| |||||| Sbjct: 349 caaacctttgttgggatttgctat 372
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 422 acctggttggagactgatctttttactctgggcctaggattcctaatgctgtcaatggga 481 ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| Sbjct: 25969625 acctggttggagactgatcttttcactgtgggcctaggattcctaatgctatcaatggga 25969684 Query: 482 ctaacattgacatttgaagatttcaggagatgtttaaggaatccatggac 531 ||||||||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 25969685 ctaacattgaccttcgaagatttcaggagatgcatgaggaatccatggac 25969734 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 269 tgcaaggcagaagctaacatttctagtaacctgccagcgagcgggcctactggagcaagc 328 |||||||| ||||||||||| || ||||| ||||||| |||| |||| || ||||| | Sbjct: 25969254 tgcaaggctgaagctaacatatccagtaatctgccagagagcattcctagtgaagcaaac 25969313 Query: 329 cagtacgagaaaatagttgagctactcaccactcttttccctgtctgggt 378 ||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 25969314 cagtacgagaaaatagttgagctgcttaccactcttttccctgtctgggt 25969363 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 536 ggtgtgggatttcttgcgcaatatttgatcaaacctatgctaggatatgctat 588 |||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 25969846 ggtgtgggatttcttgcgcagtatttgatcaaacctatgctgggatttgctat 25969898 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 376 ggtcatattaggtacagttattggcatctacaagccgtcaatggt 420 ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 25969485 ggtcatattaggtaccattattggcatctacaagccatcgatggt 25969529 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 73 ctccatggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 25967600 ctccatggcgtccgtctcccgagccctccgcccgcggccgc 25967640
>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0707D10 Length = 172003 Score = 155 bits (78), Expect = 2e-34 Identities = 102/110 (92%) Strand = Plus / Plus Query: 422 acctggttggagactgatctttttactctgggcctaggattcctaatgctgtcaatggga 481 ||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||| Sbjct: 65692 acctggttggagactgatcttttcactgtgggcctaggattcctaatgctatcaatggga 65751 Query: 482 ctaacattgacatttgaagatttcaggagatgtttaaggaatccatggac 531 ||||||||||| || ||||||||||||||||| | |||||||||||||| Sbjct: 65752 ctaacattgaccttcgaagatttcaggagatgcatgaggaatccatggac 65801 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Plus Query: 269 tgcaaggcagaagctaacatttctagtaacctgccagcgagcgggcctactggagcaagc 328 |||||||| ||||||||||| || ||||| ||||||| |||| |||| || ||||| | Sbjct: 65321 tgcaaggctgaagctaacatatccagtaatctgccagagagcattcctagtgaagcaaac 65380 Query: 329 cagtacgagaaaatagttgagctactcaccactcttttccctgtctgggt 378 ||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 65381 cagtacgagaaaatagttgagctgcttaccactcttttccctgtctgggt 65430 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 536 ggtgtgggatttcttgcgcaatatttgatcaaacctatgctaggatatgctat 588 |||||||||||||||||||| |||||||||||||||||||| |||| |||||| Sbjct: 65913 ggtgtgggatttcttgcgcagtatttgatcaaacctatgctgggatttgctat 65965 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 376 ggtcatattaggtacagttattggcatctacaagccgtcaatggt 420 ||||||||||||||| ||||||||||||||||||| || ||||| Sbjct: 65552 ggtcatattaggtaccattattggcatctacaagccatcgatggt 65596 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 73 ctccatggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 63667 ctccatggcgtccgtctcccgagccctccgcccgcggccgc 63707
>ref|NM_179758.2| Arabidopsis thaliana bile acid:sodium symporter/ transporter AT2G26900 mRNA, complete cds Length = 1504 Score = 87.7 bits (44), Expect = 4e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 396 ttggcatctacaagccgtcaatggtcacctggttggagactgatctttttactctgggcc 455 ||||||||| |||||| || |||| || |||||||| || ||||| |||||||| || | Sbjct: 418 ttggcatcttcaagccatccttggttacatggttggaaacagatctctttactctaggtc 477 Query: 456 taggattcctaatgctgtcaatgggactaacattgacatttgaagatttcaggagatgtt 515 | ||||| || ||||| || ||||| | || | || |||||||||||||| ||||||| Sbjct: 478 ttggatttcttatgctttccatgggtttgactcttacgtttgaagatttcagaagatgtt 537 Query: 516 taaggaatccatggacagttggtgtgggatttcttgcgcaatatttgatcaa 567 || | ||||||||||| || ||||| || |||||||| |||||| ||||||| Sbjct: 538 tacgtaatccatggacggtgggtgttggttttcttgctcaatatatgatcaa 589
>gb|BT003925.1| Arabidopsis thaliana clone RAFL15-23-I10 (R20694) putative Na+ dependent ileal bile acid transporter (At2g26900) mRNA, complete cds Length = 1409 Score = 87.7 bits (44), Expect = 4e-14 Identities = 140/172 (81%) Strand = Plus / Plus Query: 396 ttggcatctacaagccgtcaatggtcacctggttggagactgatctttttactctgggcc 455 ||||||||| |||||| || |||| || |||||||| || ||||| |||||||| || | Sbjct: 308 ttggcatcttcaagccatccttggttacatggttggaaacagatctctttactctaggtc 367 Query: 456 taggattcctaatgctgtcaatgggactaacattgacatttgaagatttcaggagatgtt 515 | ||||| || ||||| || ||||| | || | || |||||||||||||| ||||||| Sbjct: 368 ttggatttcttatgctttccatgggtttgactcttacgtttgaagatttcagaagatgtt 427 Query: 516 taaggaatccatggacagttggtgtgggatttcttgcgcaatatttgatcaa 567 || | ||||||||||| || ||||| || |||||||| |||||| ||||||| Sbjct: 428 tacgtaatccatggacggtgggtgttggttttcttgctcaatatatgatcaa 479
>gb|AY568720.1| Lycopersicon esculentum putative anion:sodium symporter mRNA, complete cds Length = 1224 Score = 83.8 bits (42), Expect = 6e-13 Identities = 156/194 (80%) Strand = Plus / Plus Query: 356 accactcttttccctgtctgggtcatattaggtacagttattggcatctacaagccgtca 415 ||||| ||||| ||| | ||||| ||||| |||||| | |||||||| || || || || Sbjct: 298 accaccctttttcctctatgggttatattgggtacaatcattggcatatataaaccttct 357 Query: 416 atggtcacctggttggagactgatctttttactctgggcctaggattcctaatgctgtca 475 |||||| |||||||| || ||||| || |||||||| | ||||| |||||||| ||| Sbjct: 358 gcggtcacttggttggaaacagatctcttcactctgggtttgggatttctaatgctttca 417 Query: 476 atgggactaacattgacatttgaagatttcaggagatgtttaaggaatccatggacagtt 535 ||||| | ||| | |||||||| || ||| | |||||||||||||| |||||||| || Sbjct: 418 atgggtttgacactaacatttgacgacttccgaagatgtttaaggaacccatggactgta 477 Query: 536 ggtgtgggatttct 549 ||||| |||||||| Sbjct: 478 ggtgttggatttct 491
>gb|AF498303.1| Arabidopsis thaliana putative sodium-dependent bile acid symporter (Sbf1) mRNA, complete cds Length = 1340 Score = 79.8 bits (40), Expect = 9e-12 Identities = 139/172 (80%) Strand = Plus / Plus Query: 396 ttggcatctacaagccgtcaatggtcacctggttggagactgatctttttactctgggcc 455 ||||||||| |||||| || |||| || |||||||| || ||||| |||| ||| || | Sbjct: 419 ttggcatcttcaagccatccttggttacatggttggaaacagatctctttagtctaggtc 478 Query: 456 taggattcctaatgctgtcaatgggactaacattgacatttgaagatttcaggagatgtt 515 | ||||| || ||||| || ||||| | || | || |||||||||||||| ||||||| Sbjct: 479 ttggatttcttatgctttccatgggtttgactcttacgtttgaagatttcagaagatgtt 538 Query: 516 taaggaatccatggacagttggtgtgggatttcttgcgcaatatttgatcaa 567 || | ||||||||||| || ||||| || |||||||| |||||| ||||||| Sbjct: 539 tacgtaatccatggacggtgggtgttggttttcttgctcaatatatgatcaa 590
>dbj|AK111326.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-181-D10, full insert sequence Length = 1289 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 73 ctccatggcatccgtctcccgcgctctccgcccgcggccgc 113 ||||||||| ||||||||||| || |||||||||||||||| Sbjct: 401 ctccatggcgtccgtctcccgagccctccgcccgcggccgc 441
>gb|AC005168.3| Arabidopsis thaliana chromosome 2 clone F12C20 map B68, complete sequence Length = 87978 Score = 54.0 bits (27), Expect = 5e-04 Identities = 87/107 (81%) Strand = Plus / Plus Query: 425 tggttggagactgatctttttactctgggcctaggattcctaatgctgtcaatgggacta 484 |||||||| || ||||| |||||||| || || ||||| || ||||| || ||||| | Sbjct: 27346 tggttggaaacagatctctttactctaggtcttggatttcttatgctttccatgggtttg 27405 Query: 485 acattgacatttgaagatttcaggagatgtttaaggaatccatggac 531 || | || |||||||||||||| ||||||||| | ||||||||||| Sbjct: 27406 actcttacgtttgaagatttcagaagatgtttacgtaatccatggac 27452
>gb|AC151766.1| Ornithorhynchus anatinus chromosome UNK clone OABb-433A1, complete sequence Length = 161653 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 ccctctccactccatggcat 83 |||||||||||||||||||| Sbjct: 19306 ccctctccactccatggcat 19287
>ref|XM_476894.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1615 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcccgcggccgcgcctcgccgctc 125 ||||||||||||||| |||||||| Sbjct: 53 gcccgcggccgcgccgcgccgctc 76
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cttccgcgacctgccctctc 70 |||||||||||||||||||| Sbjct: 1322167 cttccgcgacctgccctctc 1322186
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence Length = 194800 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gccctctccactccatggca 82 |||||||||||||||||||| Sbjct: 99070 gccctctccactccatggca 99089
>ref|XM_742231.1| Aspergillus fumigatus Af293 hypothetical protein (Afu8g05210) partial mRNA Length = 1323 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 ctcgccgctcctcgtctcgg 135 |||||||||||||||||||| Sbjct: 1272 ctcgccgctcctcgtctcgg 1253
>ref|XM_569705.1| Cryptococcus neoformans var. neoformans JEC21 serine/threonin kinase (CNC04370) partial mRNA Length = 3203 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 cttccgcgacctgccctctc 70 |||||||||||||||||||| Sbjct: 52 cttccgcgacctgccctctc 71
>gb|AF426384.1| Danio rerio deltaD protein gene, complete cds Length = 13352 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 554 caatatttgatcaaacctatgcta 577 |||||||| ||||||||||||||| Sbjct: 5609 caatattttatcaaacctatgcta 5632
>emb|AL591042.5| Human DNA sequence from clone RP11-480L11 on chromosome 1 Contains part of the VAV3 gene for VAV3 oncogene, complete sequence Length = 148028 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 acctgccctctccactccat 78 |||||||||||||||||||| Sbjct: 50334 acctgccctctccactccat 50353
>emb|AL606508.12| Mouse DNA sequence from clone RP23-180B9 on chromosome 11 Contains the 3' end of a novel gene and a CpG island, complete sequence Length = 189315 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 509 agatgtttaaggaatccatg 528 |||||||||||||||||||| Sbjct: 93884 agatgtttaaggaatccatg 93903
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcccgcggccgcgcctcgccgctc 125 ||||||||||||||| |||||||| Sbjct: 4489815 gcccgcggccgcgccgcgccgctc 4489838
>dbj|AP003861.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1046_F10 Length = 118472 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcccgcggccgcgcctcgccgctc 125 ||||||||||||||| |||||||| Sbjct: 68534 gcccgcggccgcgccgcgccgctc 68557
>dbj|AK106871.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-D08, full insert sequence Length = 1615 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gcccgcggccgcgcctcgccgctc 125 ||||||||||||||| |||||||| Sbjct: 53 gcccgcggccgcgccgcgccgctc 76
>gb|AF100933.1|AF100933 Oncorhynchus mykiss carbonyl reductase/20beta-hydroxysteroid dehydrogenase A gene, complete cds Length = 3010 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 catggacagttggtgtggga 544 |||||||||||||||||||| Sbjct: 2723 catggacagttggtgtggga 2742
>gb|AF100932.1|AF100932 Oncorhynchus mykiss carbonyl reductase/20beta-hydroxysteroid dehydrogenase B gene, complete cds Length = 5522 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 catggacagttggtgtggga 544 |||||||||||||||||||| Sbjct: 5227 catggacagttggtgtggga 5246
>gb|AF100931.1|AF100931 Oncorhynchus mykiss carbonyl reductase/20beta-hydroxysteroid dehydrogenase A mRNA, complete cds Length = 1278 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 catggacagttggtgtggga 544 |||||||||||||||||||| Sbjct: 913 catggacagttggtgtggga 932
>gb|AF100930.1|AF100930 Oncorhynchus mykiss carbonyl reductase/20beta-hydroxysteroid dehydrogenase B mRNA, complete cds Length = 1216 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 catggacagttggtgtggga 544 |||||||||||||||||||| Sbjct: 904 catggacagttggtgtggga 923
>dbj|AP006638.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT47I16, TM0208c, complete sequence Length = 48081 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 attcctaatgctgtcaatgg 479 |||||||||||||||||||| Sbjct: 19311 attcctaatgctgtcaatgg 19330
>gb|U19741.1|UPU19741 Urochloa panicoides carbonic anhydrase 1 mRNA, complete cds Length = 1208 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 90 cccgcgctctccgcccgcggccgc 113 |||||||||||||||||| ||||| Sbjct: 75 cccgcgctctccgcccgccgccgc 98
>emb|AL672076.10| Mouse DNA sequence from clone RP23-161N17 on chromosome 4, complete sequence Length = 208396 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 506 aggagatgtttaaggaatccatgg 529 ||||||||||||||||| |||||| Sbjct: 5143 aggagatgtttaaggaaaccatgg 5120 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,226,007 Number of Sequences: 3902068 Number of extensions: 4226007 Number of successful extensions: 99193 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 99069 Number of HSP's gapped (non-prelim): 124 length of query: 598 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 575 effective length of database: 17,143,297,704 effective search space: 9857396179800 effective search space used: 9857396179800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)