Clone Information

BLAST Search Result

Clone Name	bags8o11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	37	0.017
2	SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)	34	0.083
3	EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear a...	34	0.083
4	GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exog...	33	0.18
5	MMP16_RAT (O35548) Matrix metalloproteinase-16 precursor (EC 3.4...	32	0.31
6	MMP16_MOUSE (Q9WTR0) Matrix metalloproteinase-16 precursor (EC 3...	32	0.31
7	PIM2_MOUSE (Q62070) Serine/threonine-protein kinase Pim-2 (EC 2....	32	0.31
8	PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein	32	0.41
9	MMP16_HUMAN (P51512) Matrix metalloproteinase-16 precursor (EC 3...	32	0.41
10	RCOR3_HUMAN (Q9P2K3) REST corepressor 3	32	0.41
11	MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (...	32	0.41
12	SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dep...	32	0.54
13	RCOR3_MOUSE (Q6PGA0) REST corepressor 3	31	0.70
14	MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (...	31	0.70
15	RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X ...	31	0.91
16	GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 pre...	31	0.91
17	PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor typ...	31	0.91
18	RU1C_MOUSE (Q62241) U1 small nuclear ribonucleoprotein C (U1 snR...	30	1.2
19	RU1C_HUMAN (P09234) U1 small nuclear ribonucleoprotein C (U1 snR...	30	1.2
20	PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor t...	30	1.2
21	EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear a...	30	1.2
22	YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I	30	1.2
23	IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2	30	1.2
24	NETR_MACMU (Q5G267) Neurotrypsin precursor (EC 3.4.21.-)	30	1.6
25	IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot...	30	1.6
26	AGRN_HUMAN (O00468) Agrin precursor	30	2.0
27	PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)	30	2.0
28	HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat sh...	29	2.7
29	FP1_MYTCO (Q25434) Adhesive plaque matrix protein precursor (Foo...	29	2.7
30	PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precu...	29	3.5
31	VASN_XENTR (Q6DF55) Vasorin precursor	29	3.5
32	RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X ...	29	3.5
33	LHX2_RAT (P36198) LIM/homeobox protein Lhx2 (Homeobox protein LH-2)	29	3.5
34	LHX2_MOUSE (Q9Z0S2) LIM/homeobox protein Lhx2	29	3.5
35	LHX2_HUMAN (P50458) LIM/homeobox protein Lhx2 (Homeobox protein ...	29	3.5
36	CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)	29	3.5
37	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	29	3.5
38	RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X re...	29	3.5
39	RSMN_RAT (P63164) Small nuclear ribonucleoprotein-associated pro...	29	3.5
40	RSMN_MOUSE (P63163) Small nuclear ribonucleoprotein-associated p...	29	3.5
41	RSMN_HUMAN (P63162) Small nuclear ribonucleoprotein-associated p...	29	3.5
42	RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated p...	29	3.5
43	RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated p...	29	3.5
44	RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X ...	29	3.5
45	NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58	29	3.5
46	GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor (H...	29	3.5
47	SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich...	29	3.5
48	TLE1_BRARE (O13168) Groucho 1 protein (Fragment)	29	3.5
49	FTSK_PASMU (Q9CP13) DNA translocase ftsK	28	4.5
50	PAK6_HUMAN (Q9NQU5) Serine/threonine-protein kinase PAK 6 (EC 2....	28	4.5
51	IL4RA_HUMAN (P24394) Interleukin-4 receptor alpha chain precurso...	28	4.5
52	FA53C_PONPY (Q5R815) Protein FAM53C	28	5.9
53	BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-assoc...	28	5.9
54	TLE4_RAT (Q07141) Transducin-like enhancer protein 4 (ESP2 protein)	28	5.9
55	ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-...	28	5.9
56	TLE4_MOUSE (Q62441) Transducin-like enhancer protein 4 (Groucho-...	28	5.9
57	TLE4_HUMAN (Q04727) Transducin-like enhancer protein 4	28	5.9
58	NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter ...	28	5.9
59	HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated...	28	5.9
60	RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated p...	28	5.9
61	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	28	5.9
62	SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	28	5.9
63	IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2	28	5.9
64	WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7...	28	7.7
65	RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated pro...	28	7.7
66	TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA ...	28	7.7
67	MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (I...	28	7.7
68	DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)	28	7.7
69	BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associa...	28	7.7
70	ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing pro...	28	7.7
71	WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)	28	7.7
72	WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)	28	7.7
73	TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA ...	28	7.7
74	NETR_PONPY (Q5G269) Neurotrypsin precursor (EC 3.4.21.-)	28	7.7
75	PO21_POPJA (Q03273) Retrovirus-related Pol polyprotein from type...	28	7.7
76	ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (I...	28	7.7
77	NETR_PANTR (Q5G271) Neurotrypsin precursor (EC 3.4.21.-)	28	7.7
78	NETR_HYLLE (Q5G268) Neurotrypsin precursor (EC 3.4.21.-)	28	7.7
79	SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sem...	28	7.7
80	RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated p...	28	7.7
81	RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2	28	7.7

>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 36.6 bits (83), Expect = 0.017
 Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGR---PLSSQRRLATPTALVPPIFGSRAP 206
           P    A +IPL   G    PP  P+   P +GR   PLSS R ++ P A  P I G  AP
Sbjct: 343 PRSNAAGSIPLPPQGRSAPPPPPPR-SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401

Query: 207 SLVSPP 224
           +L  PP
Sbjct: 402 AL--PP 405

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>SEM6C_RAT (Q9WTL3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 960

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 9    GRACKVAXTPT-RPCAPTIPLFIAGHGQ--VPPRRPKIGRPPSGRPLSSQRRLATPTALV 179
            G A  V  +P  R C P + L +   G+   P  RP +  P     +S  RRL  PT   
Sbjct: 833  GAALFVDSSPMPRDCVPPLRLDVPPDGKRAAPSGRPALSAPAPRLGVSGSRRLPFPTHRA 892

Query: 180  PPIFGSRAPS 209
            PP   +R PS
Sbjct: 893  PPGLLTRVPS 902

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>EBNA4_EBV (P03203) Epstein-Barr nuclear antigen 4 (EBV nuclear antigen 4)|
           (EBNA-4) (EBNA-3B)
          Length = 938

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
 Frame = +3

Query: 33  TPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTAL----VPPIFGSR 200
           TPT P    +  +     Q PPR P    PP   P+  QR    PT      VPP+   R
Sbjct: 677 TPTGPATMLLRQWAPATMQTPPRAPTPMSPPEVPPVPRQRPRGAPTPTPPPQVPPVPRQR 736

Query: 201 ---APSLVSPP 224
              AP+   PP
Sbjct: 737 PRGAPTPTPPP 747

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>GUX2_TRIRE (P07987) Exoglucanase 2 precursor (EC 3.2.1.91) (Exoglucanase II)|
           (Exocellobiohydrolase II) (CBHII)
           (1,4-beta-cellobiohydrolase)
          Length = 471

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = +2

Query: 14  CLQGCKXTYTAMRSDHTTLHRRP---RTGAATPPQNRPTTVRPPSVIPATAGYSHRP 175
           CL G   + ++ R+  TT    P   R+ +ATPP    TT R P V   TA YS  P
Sbjct: 61  CLPGAASSSSSTRAASTTSRVSPTTSRSSSATPPPG-STTTRVPPVGSGTATYSGNP 116

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>MMP16_RAT (O35548) Matrix metalloproteinase-16 precursor (EC 3.4.24.-)|
           (MMP-16) (Membrane-type matrix metalloproteinase 3)
           (MT-MMP 3) (MTMMP3) (Membrane-type-3 matrix
           metalloproteinase) (MT3-MMP) (MT3MMP)
          Length = 607

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPR------RPKIGRPPSGRP 137
           PTRP  PT+P     H  VPP       RPK  RPP+GRP
Sbjct: 299 PTRPL-PTVP----PHRSVPPADPRKNDRPKPPRPPTGRP 333

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>MMP16_MOUSE (Q9WTR0) Matrix metalloproteinase-16 precursor (EC 3.4.24.-)|
           (MMP-16) (Membrane-type matrix metalloproteinase 3)
           (MT-MMP 3) (MTMMP3) (Membrane-type-3 matrix
           metalloproteinase) (MT3-MMP) (MT3MMP)
          Length = 607

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 20/40 (50%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPR------RPKIGRPPSGRP 137
           PTRP  PT+P     H  VPP       RPK  RPP+GRP
Sbjct: 299 PTRPL-PTVP----PHRSVPPADPRRHDRPKPPRPPTGRP 333

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>PIM2_MOUSE (Q62070) Serine/threonine-protein kinase Pim-2 (EC 2.7.11.1)|
          Length = 370

 Score = 32.3 bits (72), Expect = 0.31
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = +2

Query: 62  TTLHRRPRTGAATPPQNRPTTVRPPSV-IPATAGYSHRPC 178
           T L+  P  GA+ PP + P+T+ PPS   PA    +  PC
Sbjct: 5   TNLNAAPSAGASGPPDSLPSTLAPPSPGSPAALPRASTPC 44

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>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPP--RRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPS 209
           P +PC P      + HG  PP  + P + RPP   P       +TP     P F  + PS
Sbjct: 88  PQKPCPPP-----SHHGPKPPIVKPPHVPRPPIVHPPPIVSPPSTPKPPKTPPFTPKPPS 142

Query: 210 ----LVSPP 224
               +VSPP
Sbjct: 143 PIPPIVSPP 151



 Score = 28.1 bits (61), Expect = 5.9
 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPR-RPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSL 212
           P  P  P+ P     H ++PP+ +P   +PP  +P S+ +    P  + PP    + P  
Sbjct: 8   PYCPYPPSTPK----HPKLPPKVKPPSTQPPHVKPPSTPKHPKDPPHVKPP-STPKQPPY 62

Query: 213 VSPP 224
           V PP
Sbjct: 63  VKPP 66

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>MMP16_HUMAN (P51512) Matrix metalloproteinase-16 precursor (EC 3.4.24.-)|
           (MMP-16) (Membrane-type matrix metalloproteinase 3)
           (MT-MMP 3) (MTMMP3) (Membrane-type-3 matrix
           metalloproteinase) (MT3-MMP) (MT3MMP) (MMP-X2)
          Length = 607

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 6/40 (15%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPR------RPKIGRPPSGRP 137
           PTRP  PT+P     H  +PP       RPK  RPP+GRP
Sbjct: 299 PTRPL-PTVP----PHRSIPPADPRKNDRPKPPRPPTGRP 333

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>RCOR3_HUMAN (Q9P2K3) REST corepressor 3|
          Length = 495

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 21/82 (25%)
 Frame = +3

Query: 33  TPTRPCA----------PTIPLFIAGHGQVPPR---------RPKIGRPPSG--RPLSSQ 149
           TPT P A          PT+P   A H Q PP          RP + +PP    RP +S 
Sbjct: 403 TPTAPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSM 462

Query: 150 RRLATPTALVPPIFGSRAPSLV 215
                P  ++  + G + PSL+
Sbjct: 463 PPRLNPRPVLSTVGGQQPPSLI 484

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>MILK1_HUMAN (Q8N3F8) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 863

 Score = 32.0 bits (71), Expect = 0.41
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = +3

Query: 27  AXTPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           A    RP  PT P       +VP +  ++  PP+GRP  + R+ +  T   PP
Sbjct: 272 ASPEARPQIPTKP-------RVPGKLQELASPPAGRPTPAPRKASESTTPAPP 317

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>SMRC2_HUMAN (Q8TAQ2) SWI/SNF-related matrix-associated actin-dependent regulator|
            of chromatin subfamily C member 2 (SWI/SNF complex 170
            kDa subunit) (BRG1-associated factor 170)
          Length = 1214

 Score = 31.6 bits (70), Expect = 0.54
 Identities = 16/32 (50%), Positives = 17/32 (53%)
 Frame = +2

Query: 80   PRTGAATPPQNRPTTVRPPSVIPATAGYSHRP 175
            P TGAA PP      V P SV+PA AG    P
Sbjct: 973  PPTGAAGPPAVHGLAVAPASVVPAPAGSGAPP 1004

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>RCOR3_MOUSE (Q6PGA0) REST corepressor 3|
          Length = 451

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 21/82 (25%)
 Frame = +3

Query: 33  TPTRPCA----------PTIPLFIAGHGQVPPR---------RPKIGRPPSG--RPLSSQ 149
           TPT P A          PT+P   A H Q PP          RP + +PP    RP +S 
Sbjct: 359 TPTVPIATLNQPPPLLRPTLPAAPALHRQPPPLQQQARFIQPRPTLNQPPPPLIRPANSM 418

Query: 150 RRLATPTALVPPIFGSRAPSLV 215
                P  ++  + G + PSL+
Sbjct: 419 PPRLNPRPVLTTVGGQQPPSLI 440

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>MILK1_MOUSE (Q8BGT6) Molecule interacting with Rab13 (MIRab13) (MICAL-like|
           protein 1)
          Length = 870

 Score = 31.2 bits (69), Expect = 0.70
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 33  TPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           TPT+P  P+ P  +A              PP GRP  + R+ +  +AL PP
Sbjct: 276 TPTKPPLPSKPQELAS-------------PPGGRPTPAPRKASESSALTPP 313

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>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 20/65 (30%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
 Frame = +3

Query: 84  GQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVS--------PPW*RGF 239
           G  PP  P +  PPS  P         P  + PP  GS  P + S        PP   GF
Sbjct: 94  GAPPPSPPGLPLPPSSAPTLGGSGAPPPPPMPPPQLGSPFPVISSSMGSPGLPPPAPPGF 153

Query: 240 GRPIT 254
             P++
Sbjct: 154 SGPVS 158



 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
 Frame = +3

Query: 54  PTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRL-----ATPTALVPPIFGSRAPSLVS 218
           P I   +   G  PP  P    P S   ++S   L       P  + PP+ G R      
Sbjct: 134 PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP 193

Query: 219 PPW*RGFGRPITDLAMGLSFGDH 287
           PP   G G+ +  +    S G H
Sbjct: 194 PPGGPGAGKRLCAICGDRSSGKH 216

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>GP179_HUMAN (Q6PRD1) Probable G-protein coupled receptor 179 precursor (Probable|
            G-protein coupled receptor 158-like 1)
          Length = 2367

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 26/74 (35%), Positives = 33/74 (44%), Gaps = 11/74 (14%)
 Frame = +3

Query: 24   VAXTPTR----PCAPTIPLFIAGHGQV----PPRR---PKIGRPPSGRPLSSQRRLATPT 170
            +A T TR    P AP  PL +  HG +    P  +   PK+ RP S   L   R L  P+
Sbjct: 2257 LALTATRREFFPTAPEKPLCLLVHGPLDHFFPESKIPCPKVSRPASTFTLEGVRELQGPS 2316

Query: 171  ALVPPIFGSRAPSL 212
             L P    +  PSL
Sbjct: 2317 GLEPRTSLAPEPSL 2330

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>PTN23_RAT (O88902) Tyrosine-protein phosphatase non-receptor type 23 (EC|
           3.1.3.48) (His-domain-containing protein tyrosine
           phosphatase) (HD-PTP) (Protein tyrosine phosphatase
           TD14) (PTP-TD14) (Fragment)
          Length = 1499

 Score = 30.8 bits (68), Expect = 0.91
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 87  QVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPP 224
           Q  P+RP  G  P+ +PL  Q          P +F S+AP +++PP
Sbjct: 823 QPQPQRPVFGPQPTQQPLPFQH---------PHLFPSQAPGILTPP 859

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>RU1C_MOUSE (Q62241) U1 small nuclear ribonucleoprotein C (U1 snRNP protein C)|
           (U1C protein) (U1-C)
          Length = 159

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSG-RPLSSQRRLATPTALVPPIFGSRAPSL 212
           P+ P  P   +  A H   PP  P +G PP G  P+        P   + P  G   P +
Sbjct: 81  PSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVG-------PAPGMRPPMGGHMPMM 133

Query: 213 VSPPW*RGFGRPI 251
             PP  R   RP+
Sbjct: 134 PGPPMMRPPARPM 146

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>RU1C_HUMAN (P09234) U1 small nuclear ribonucleoprotein C (U1 snRNP protein C)|
           (U1C protein) (U1-C)
          Length = 159

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSG-RPLSSQRRLATPTALVPPIFGSRAPSL 212
           P+ P  P   +  A H   PP  P +G PP G  P+        P   + P  G   P +
Sbjct: 81  PSLPGPPRPGMMPAPHMGGPPMMPMMGPPPPGMMPVG-------PAPGMRPPMGGHMPMM 133

Query: 213 VSPPW*RGFGRPI 251
             PP  R   RP+
Sbjct: 134 PGPPMMRPPARPM 146

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>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48)
          Length = 1692

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = +3

Query: 87   QVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPP 224
            Q  P+RP  G  P+ +PL  Q          P +F S+AP ++ PP
Sbjct: 1014 QPQPQRPAFGPQPTQQPLPFQH---------PHLFPSQAPGILPPP 1050

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>EBNA6_EBV (P03204) Epstein-Barr nuclear antigen 6 (EBV nuclear antigen 6)|
           (EBNA-6) (EBNA-3C) (EBNA-4B)
          Length = 992

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 6/78 (7%)
 Frame = +3

Query: 9   GRACKVAXTPTRPCAPTIPLFIAGHGQVPPRR------PKIGRPPSGRPLSSQRRLATPT 170
           GR  K A  PT   + T P  +      PP        P    PP+  P ++  R+  P 
Sbjct: 543 GRRQKRAAPPTVSPSDTGPPAVGPPAAGPPAAGPPAAGPPAAGPPAAGPPAAGPRILAPL 602

Query: 171 ALVPPIFGSRAPSLVSPP 224
           +  PP  G   P +V+PP
Sbjct: 603 SAGPPAAG---PHIVTPP 617

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>YDC9_SCHPO (Q10172) Hypothetical protein C25G10.09c in chromosome I|
          Length = 1794

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = +3

Query: 24   VAXTPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRA 203
            V+  P RP +   P   A     PP    +  PPS  P+ +      P+A  PP+  S A
Sbjct: 1687 VSTPPVRPQSAAPPQMSAPTPPPPPM--SVPPPPSAPPMPA----GPPSAPPPPLPASSA 1740

Query: 204  PSLVSP 221
            PS+ +P
Sbjct: 1741 PSVPNP 1746

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>IF2_NOCFA (Q5YSC6) Translation initiation factor IF-2|
          Length = 969

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
 Frame = +3

Query: 27  AXTPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVP---PIFGS 197
           A TP RP AP  P   A   + P +RP  G P   RP   Q+R   P    P   P  G 
Sbjct: 118 APTPARPAAPEAPAAKAA-PEAPAQRPTPGGP---RPGQQQQRPGAPAQGGPRPGPKPGP 173

Query: 198 RAPSLVSPPW 227
           + P + + P+
Sbjct: 174 KTPRVGNNPY 183

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>NETR_MACMU (Q5G267) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 875

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
 Frame = +2

Query: 65  TLHRRPRTGAATPPQNRPTTVRPPSVIPA------TAGYSHRP----CPS-HLWI*GPIT 211
           T  R PRT    PP   P   RPP  +PA       AG++ RP    CP+  LW+   +T
Sbjct: 49  THQRPPRT---RPPPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWGCPAGELWV--SVT 103

Query: 212 GF-TPMVTW 235
            F  P + W
Sbjct: 104 DFGAPCLRW 112

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>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLAT 164
           P  PC+P+         + P   P+   PPSG P  +++ LAT
Sbjct: 617 PPSPCSPSPASRERRPSKSPSSSPRPHDPPSGEPADAEKELAT 659

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>AGRN_HUMAN (O00468) Agrin precursor|
          Length = 2045

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
 Frame = +3

Query: 36   PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRP---LSSQRRLATPTALVPPIFGSRAP 206
            P  P A  +      H Q  P       PPS RP    S  R    P   VPP   S AP
Sbjct: 998  PAPPGALPLAPSSTAHSQTTP-------PPSSRPRTTASVPRTTVWPVLTVPPTAPSPAP 1050

Query: 207  SLVS 218
            SLV+
Sbjct: 1051 SLVA 1054

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>PCLO_HUMAN (Q9Y6V0) Protein piccolo (Aczonin)|
          Length = 5183

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 18/55 (32%), Positives = 24/55 (43%)
 Frame = +3

Query: 87  QVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPPW*RGFGRPI 251
           Q  P +P   +P S +P S Q   A P+A  P      A     P    GFG+P+
Sbjct: 459 QPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQFTKPVSQTGFGKPL 513

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>HSF1_HUMAN (Q00613) Heat shock factor protein 1 (HSF 1) (Heat shock|
           transcription factor 1) (HSTF 1)
          Length = 529

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/42 (38%), Positives = 22/42 (52%)
 Frame = +3

Query: 93  PPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVS 218
           PP+ P++     GRP SS   L +PTAL+  I     P+  S
Sbjct: 304 PPQSPRVEEASPGRP-SSVDTLLSPTALIDSILRESEPAPAS 344

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>FP1_MYTCO (Q25434) Adhesive plaque matrix protein precursor (Foot protein 1)|
           (MCFP1)
          Length = 872

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 20/67 (29%), Positives = 28/67 (41%)
 Frame = +3

Query: 21  KVAXTPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSR 200
           K++  PT    P+ P         P  +PKI  PP+ +P  S      P    PP +  R
Sbjct: 445 KISYPPTYKPKPSYP---------PTYKPKITYPPTYKPKPSYPPTYKPKITYPPTY-KR 494

Query: 201 APSLVSP 221
            PS  +P
Sbjct: 495 KPSYPTP 501



 Score = 28.9 bits (63), Expect = 3.5
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = +3

Query: 21  KVAXTPTRPCAPTIPLFIAGHGQVPPR-RPKIGRPPSGRPLSSQRRLATPTALVPPIFGS 197
           K+   PT    P+ P         PP  +PKI  PP+ +P +S      P    PP +  
Sbjct: 535 KITYPPTYKPKPSYPPSYKPKTTYPPTYKPKIRYPPTYKPKASYPPTYKPKITYPPTYKP 594

Query: 198 RAPSLVSP 221
           + PS  +P
Sbjct: 595 K-PSYPTP 601



 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 8/76 (10%)
 Frame = +3

Query: 21  KVAXTPT-RPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGS 197
           K++  PT +P A  +  + +     P  +PKI  PP+ +P  S      P    PP +  
Sbjct: 415 KISYPPTYKPKASYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPPTYKPKITYPPTYKP 474

Query: 198 R-------APSLVSPP 224
           +        P +  PP
Sbjct: 475 KPSYPPTYKPKITYPP 490

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>PPA1_ASPNG (P20584) Phosphate-repressible acid phosphatase precursor (EC|
           3.1.3.2) (Acid phosphatase PII)
          Length = 436

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 29/99 (29%), Positives = 36/99 (36%), Gaps = 22/99 (22%)
 Frame = +2

Query: 41  TAMRSDHTTLHRRPRTGAATP------------PQNRPTTVRPPSVIPATA--------- 157
           TA ++      R P TG A P             +  P  V PP+V PATA         
Sbjct: 16  TAAQARPVVDERFPYTGPAVPIGDWVDPTINGNGKGFPRLVEPPAVKPATANPRNNVNVI 75

Query: 158 GYSHRPCPSHLWI*GPI-TGFTPMVTWIRSSHNGSGHGA 271
             S+ P   H+    P   G  P V W +   N   HGA
Sbjct: 76  SLSYIPKGMHIHYQTPFGLGQLPAVRWGKDPRNLKQHGA 114

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>VASN_XENTR (Q6DF55) Vasorin precursor|
          Length = 661

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 20/70 (28%), Positives = 26/70 (37%), Gaps = 8/70 (11%)
 Frame = +2

Query: 47  MRSDHTTLHRRPRTGAATPPQNR--------PTTVRPPSVIPATAGYSHRPCPSHLWI*G 202
           +R D T  H  P+    T  Q R        PTT++ PS +P +          HL    
Sbjct: 316 LRPDETRCHFPPKNAGKTLRQLRDSEYGCPAPTTIQMPSTMPPSTTTGPPTTTKHLQTEA 375

Query: 203 PITGFTPMVT 232
           P T  T   T
Sbjct: 376 PTTASTTTTT 385

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>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
          Length = 533

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
 Frame = +3

Query: 54  PTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRL-----ATPTALVPPIFGSRAPSLVS 218
           P I   +   G  PP  P    P S   ++S   L       P  + PP+ G R      
Sbjct: 134 PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP 193

Query: 219 PPW*RGFGRPITDLAMGLSFGDH 287
           PP   G G+ +  +    S G H
Sbjct: 194 PPGGPGAGKRLCAICGDRSSGKH 216

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>LHX2_RAT (P36198) LIM/homeobox protein Lhx2 (Homeobox protein LH-2)|
          Length = 426

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 95  RHLSVAGDEEWYGRSAWPCRCXCNLASTXTC 3
           R+  +A D++W+ R    C C  NL S  TC
Sbjct: 62  RYYLLAVDKQWHMRCLKCCECKLNLESELTC 92

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>LHX2_MOUSE (Q9Z0S2) LIM/homeobox protein Lhx2|
          Length = 406

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 95  RHLSVAGDEEWYGRSAWPCRCXCNLASTXTC 3
           R+  +A D++W+ R    C C  NL S  TC
Sbjct: 63  RYYLLAVDKQWHMRCLKCCECKLNLESELTC 93

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>LHX2_HUMAN (P50458) LIM/homeobox protein Lhx2 (Homeobox protein LH-2)|
          Length = 406

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -1

Query: 95  RHLSVAGDEEWYGRSAWPCRCXCNLASTXTC 3
           R+  +A D++W+ R    C C  NL S  TC
Sbjct: 63  RYYLLAVDKQWHMRCLKCCECKLNLESELTC 93

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>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)|
          Length = 1655

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/35 (40%), Positives = 15/35 (42%)
 Frame = +2

Query: 83  RTGAATPPQNRPTTVRPPSVIPATAGYSHRPCPSH 187
           RTG  TP   R     PP + P   G S  P P H
Sbjct: 517 RTGLKTPGVARVDRGNPPPIPPKKPGLSQTPSPPH 551

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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
 Frame = +3

Query: 93  PPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVS---PPW*RGFGRPIT 254
           PP  P +G PPS +P       A P A  PP      P ++    PP   GFG P T
Sbjct: 428 PPPAPPLGSPPSSKP-----GFAPPPAPPPP-----PPPMIGIPPPPPPIGFGSPGT 474

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>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (Nuclear receptor coregulator 1) (Fragment)
          Length = 458

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
 Frame = +3

Query: 54  PTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRL-----ATPTALVPPIFGSRAPSLVS 218
           P I   +   G  PP  P    P S   ++S   L       P  + PP+ G R      
Sbjct: 59  PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP 118

Query: 219 PPW*RGFGRPITDLAMGLSFGDH 287
           PP   G G+ +  +    S G H
Sbjct: 119 PPGGPGAGKRLCAICGDRSSGKH 141

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>RSMN_RAT (P63164) Small nuclear ribonucleoprotein-associated protein N|
           (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D)
          Length = 240

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
 Frame = +3

Query: 15  ACKVAXTPTRPCAPTIPLFIAGHGQVPP------------RRPKIGRPPSGRPLSSQRRL 158
           A  VA T +   APT   +  G G  PP              P   RPP G P+      
Sbjct: 152 AAAVAATASIAGAPT--QYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR 209

Query: 159 ATPTALVPPIFGSRAPSLVSPP 224
            TP  + PP      P +  PP
Sbjct: 210 GTPIGMPPPGMRPPPPGIRGPP 231

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>RSMN_MOUSE (P63163) Small nuclear ribonucleoprotein-associated protein N|
           (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D)
           (Tissue-specific splicing protein)
          Length = 240

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
 Frame = +3

Query: 15  ACKVAXTPTRPCAPTIPLFIAGHGQVPP------------RRPKIGRPPSGRPLSSQRRL 158
           A  VA T +   APT   +  G G  PP              P   RPP G P+      
Sbjct: 152 AAAVAATASIAGAPT--QYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR 209

Query: 159 ATPTALVPPIFGSRAPSLVSPP 224
            TP  + PP      P +  PP
Sbjct: 210 GTPIGMPPPGMRPPPPGIRGPP 231

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>RSMN_HUMAN (P63162) Small nuclear ribonucleoprotein-associated protein N|
           (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D)
           (Tissue-specific splicing protein)
          Length = 240

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/82 (29%), Positives = 29/82 (35%), Gaps = 12/82 (14%)
 Frame = +3

Query: 15  ACKVAXTPTRPCAPTIPLFIAGHGQVPP------------RRPKIGRPPSGRPLSSQRRL 158
           A  VA T +   APT   +  G G  PP              P   RPP G P+      
Sbjct: 152 AAAVAATASIAGAPT--QYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPAR 209

Query: 159 ATPTALVPPIFGSRAPSLVSPP 224
            TP  + PP      P +  PP
Sbjct: 210 GTPIGMPPPGMRPPPPGIRGPP 231

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>RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated proteins B and|
           B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB')
          Length = 240

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   ARGRACKVAXTPTR-PCAPTIPLFIAGHGQVPPRR---PKIGRPPSGRPLSSQRRLATPT 170
           A      +A  PT+ P     P    G G  PP     P   RPP G P+       TP 
Sbjct: 154 AAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPM 213

Query: 171 ALVPPIFGSRAPSLVSPP 224
            + PP      P +  PP
Sbjct: 214 GMPPPGMRPPPPGMRGPP 231

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>RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   ARGRACKVAXTPTR-PCAPTIPLFIAGHGQVPPRR---PKIGRPPSGRPLSSQRRLATPT 170
           A      +A  PT+ P     P    G G  PP     P   RPP G P+       TP 
Sbjct: 154 AAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPM 213

Query: 171 ALVPPIFGSRAPSLVSPP 224
            + PP      P +  PP
Sbjct: 214 GMPPPGMRPPPPGMRGPP 231

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>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)|
           (MHC class I regulatory element-binding protein
           H-2RIIBP)
          Length = 520

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/83 (26%), Positives = 30/83 (36%), Gaps = 5/83 (6%)
 Frame = +3

Query: 54  PTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRL-----ATPTALVPPIFGSRAPSLVS 218
           P I   +   G  PP  P    P S   ++S   L       P  + PP+ G R      
Sbjct: 121 PVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPP 180

Query: 219 PPW*RGFGRPITDLAMGLSFGDH 287
           PP   G G+ +  +    S G H
Sbjct: 181 PPGGPGAGKRLCAICGDRSSGKH 203

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>NUPL1_DROME (Q9VDV3) Probable nucleoporin Nup58|
          Length = 546

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 26/81 (32%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
 Frame = +3

Query: 33  TPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRA--P 206
           TPT   AP      A     P        P  G P S+    AT TA   P FG+ A  P
Sbjct: 42  TPTFGAAPATTSLFAAPAATPAFGAPAATPAFGAPASTPGFGATSTAA--PAFGTAAATP 99

Query: 207 SLVSPPW*RGFGRPITDLAMG 269
           +   P     FG P    A G
Sbjct: 100 AFGIPAATSAFGAPAATPAFG 120

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>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor|
           (Hydroxyproline-rich glycoprotein 1)
          Length = 555

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +3

Query: 33  TPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSL 212
           TP  P +P +P   A     PP  P    P    P+       +P +  PP   S AP  
Sbjct: 177 TPPSP-SPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPS 235

Query: 213 VSPP 224
            SPP
Sbjct: 236 PSPP 239



 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/63 (31%), Positives = 22/63 (34%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLV 215
           P  P  P+ P         P   P    PPS  P S       P +  PP   S AP   
Sbjct: 70  PPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSP 129

Query: 216 SPP 224
           SPP
Sbjct: 130 SPP 132

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>SFPQ_MOUSE (Q8VIJ6) Splicing factor, proline- and glutamine-rich|
           (Polypyrimidine tract-binding protein-associated
           splicing factor) (PTB-associated splicing factor) (PSF)
           (DNA-binding p52/p100 complex, 100 kDa subunit)
          Length = 699

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 18/61 (29%), Positives = 23/61 (37%)
 Frame = +3

Query: 39  TRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVS 218
           ++P  P  P    G    PP  P +  PP+  P +       PT   PP   S AP    
Sbjct: 103 SKPVVPQGPGSAPGVSSAPP--PAVSAPPANPPTTGAPPGPGPTPTPPPAVPSTAPGPPP 160

Query: 219 P 221
           P
Sbjct: 161 P 161

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>TLE1_BRARE (O13168) Groucho 1 protein (Fragment)|
          Length = 535

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
 Frame = +3

Query: 33  TPT-RPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           TPT R  APT      G    P  RP+ G+PP    L++   L TP ++ PP
Sbjct: 93  TPTHRNDAPT-----PGTSNTPGLRPRPGKPPGMEALTAP-ALRTPLSIAPP 138

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>FTSK_PASMU (Q9CP13) DNA translocase ftsK|
          Length = 930

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
 Frame = +2

Query: 41  TAMRSDHTTLHRRPRTGAATPP---QNRPTTVRPPSVIPATAGYSHRPCPSH 187
           TA  SD TT H +P   +   P   Q   T V+P + +P+     HRP  +H
Sbjct: 402 TADVSDSTTPHYKPYGESLIHPALQQKVTTQVKPTTPMPSLDLLEHRPSQAH 453

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>PAK6_HUMAN (Q9NQU5) Serine/threonine-protein kinase PAK 6 (EC 2.7.11.1)|
           (p21-activated kinase 6) (PAK-6) (PAK-5)
          Length = 681

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 16/88 (18%)
 Frame = +3

Query: 3   ARGRACKVAXTPTRPCAPTIP----------------LFIAGHGQVPPRRPKIGRPPSGR 134
           AR ++C V     RP     P                +F++     PP   K G PP  +
Sbjct: 227 ARPQSCLVGSATGRPGGEGSPSPKTRESSLKRRLFRSMFLSTAATAPPSSSKPGPPPQSK 286

Query: 135 PLSSQRRLATPTALVPPIFGSRAPSLVS 218
           P SS R    P    PP   ++A SL S
Sbjct: 287 PNSSFR---PPQKDNPPSLVAKAQSLPS 311

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>IL4RA_HUMAN (P24394) Interleukin-4 receptor alpha chain precursor (IL-4R-alpha)|
           (CD124 antigen) [Contains: Soluble interleukin-4
           receptor alpha chain (sIL4Ralpha/prot) (IL-4-binding
           protein) (IL4-BP)]
          Length = 825

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRP 137
           P  P    +PLF  G  + PPR P+    PS  P
Sbjct: 642 PGDPAPVPVPLFTFGLDREPPRSPQSSHLPSSSP 675

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>FA53C_PONPY (Q5R815) Protein FAM53C|
          Length = 392

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 25/89 (28%), Positives = 34/89 (38%), Gaps = 11/89 (12%)
 Frame = +2

Query: 65  TLHRRPRTGAATPPQN------RPTTVRPPSVIPATAGYSHRPC-----PSHLWI*GPIT 211
           +LH RP +  ++P +       RP    P  +    A  S R C     P  L    P+ 
Sbjct: 75  SLHLRPPSRGSSPKEQPLSQVLRPEPPDPEKLPVPPAPPSKRHCRSLSVPVDLSRWQPVW 134

Query: 212 GFTPMVTWIRSSHNGSGHGALLR*PRRSP 298
              P   W    H GSG G   + P +SP
Sbjct: 135 RPAPSKLWTPIKHRGSGGGGGPQVPHQSP 163

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>BAT3_MOUSE (Q9Z1R2) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1154

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 28/81 (34%), Positives = 33/81 (40%), Gaps = 22/81 (27%)
 Frame = +3

Query: 45  PCAPTIPLFIAGHG-----QVP-----PRRPKIGRP---------PSGRPLSSQRR---L 158
           P APT PL   GHG     QVP     P R  I RP         P G P+S   +   L
Sbjct: 473 PSAPTGPLGPPGHGQTLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGALQGAGL 532

Query: 159 ATPTALVPPIFGSRAPSLVSP 221
            T T+L   + G     L+ P
Sbjct: 533 GTNTSLAQMVSGLVGQLLMQP 553

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>TLE4_RAT (Q07141) Transducin-like enhancer protein 4 (ESP2 protein)|
          Length = 741

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 33  TPT-RPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           TPT R  APT      G    P  RP  G+PP   PL+S   L TP A+  P
Sbjct: 293 TPTPRTDAPT-----PGSNSTPGLRPVPGKPPGVDPLASS--LRTPMAVPCP 337

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>ACK1_HUMAN (Q07912) Activated CDC42 kinase 1 (EC 2.7.10.2) (ACK-1) (Tyrosine|
           kinase non-receptor protein 2)
          Length = 1036

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 24/67 (35%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVP----PRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRA 203
           P RP  P + L  A  G+      P      R P   PLS Q    TP+ LVPP      
Sbjct: 745 PPRPTRPHVQLSPAPPGEEETSQWPGPASPPRVPPREPLSPQGS-RTPSPLVPPGSSPLP 803

Query: 204 PSLVSPP 224
           P L S P
Sbjct: 804 PRLSSSP 810

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>TLE4_MOUSE (Q62441) Transducin-like enhancer protein 4 (Groucho-related|
           protein 4) (Grg-4)
          Length = 766

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 33  TPT-RPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           TPT R  APT      G    P  RP  G+PP   PL+S   L TP A+  P
Sbjct: 318 TPTPRTDAPT-----PGSNSTPGLRPVPGKPPGVDPLASS--LRTPMAVPCP 362

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>TLE4_HUMAN (Q04727) Transducin-like enhancer protein 4|
          Length = 766

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/52 (42%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +3

Query: 33  TPT-RPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           TPT R  APT      G    P  RP  G+PP   PL+S   L TP A+  P
Sbjct: 318 TPTPRTDAPT-----PGSNSTPGLRPVPGKPPGVDPLASS--LRTPMAVPCP 362

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>NADAP_HUMAN (Q9BWU0) Kanadaptin (Kidney anion exchanger adapter protein)|
           (Solute carrier family 4 anion exchanger member 1
           adapter protein) (Lung cancer oncogene 3 protein)
          Length = 796

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 17/51 (33%), Positives = 24/51 (47%)
 Frame = +3

Query: 75  AGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPPW 227
           +G   +PP +P  G     R L  ++    PTA+  P   +RAP    PPW
Sbjct: 113 SGEPDIPPPQPDCG---DFRSLQEEQS-RPPTAVSSPGGPARAPPYQEPPW 159

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>HCN4_HUMAN (Q9Y3Q4) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4
          Length = 1203

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 21/63 (33%), Positives = 30/63 (47%)
 Frame = +3

Query: 93   PPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPPW*RGFGRPITDLAMGL 272
            P  R      PS  P  ++  L  P   +PP   SR+PS  S P     G+P  +L++GL
Sbjct: 931  PGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPS--SSP--GQLGQPPGELSLGL 986

Query: 273  SFG 281
            + G
Sbjct: 987  ATG 989

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>RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated protein B'|
           (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB')
          Length = 240

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 22/78 (28%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
 Frame = +3

Query: 3   ARGRACKVAXTPTR-PCAPTIPLFIAGHGQVPPRR---PKIGRPPSGRPLSSQRRLATPT 170
           A      +A  PT+ P     P    G G  PP     P   RPP G P+        P 
Sbjct: 154 AAAATASIAGAPTQYPSGRGGPPPPMGRGAPPPGMMAPPPGMRPPMGPPMGMPPGRGAPM 213

Query: 171 ALVPPIFGSRAPSLVSPP 224
            + PP      P +  PP
Sbjct: 214 GMPPPGMRPPPPGMRGPP 231

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 62  TTLHRRPRTGAATPPQNRPTTVRPPS 139
           T  H  P TGAA PP   PT + PP+
Sbjct: 199 TAAHHSPSTGAAAPPAG-PTGLPPPT 223

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>SYNJ1_HUMAN (O43426) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1)
          Length = 1575

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
 Frame = +3

Query: 33   TPTRPCAPTIPLFIAGHGQVPPRRP----KIGRPPSGRPLSSQRRLATPTALVPPIFGSR 200
            TP  P A + P+       +P + P    +  RPP  RP++   R A P    PP  G+R
Sbjct: 1075 TPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPPRPVAPPTRPAPPQR-PPPPSGAR 1133

Query: 201  APS 209
            +P+
Sbjct: 1134 SPA 1136

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>IF2_SYNP6 (Q5N0A5) Translation initiation factor IF-2|
          Length = 1030

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 87  QVPPRRPKIGRPPSGRPLSSQRRLATPTALVPP 185
           Q  P RP++G+P +G  +S   +   P  LV P
Sbjct: 221 QTGPARPQLGQPVAGNGVSKPAKPVKPIELVAP 253

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>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1)|
           (Protein kinase with no lysine 2) (Protein kinase,
           lysine-deficient 2)
          Length = 2297

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 20/63 (31%), Positives = 26/63 (41%)
 Frame = +3

Query: 36  PTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLV 215
           P +P  P +P ++A   QV       G P   +PL   +    P A VPP      P  V
Sbjct: 751 PLQPVPPHLPPYLAPASQV-------GAPAQLKPLQMPQAPLQPLAQVPP---QMPPIPV 800

Query: 216 SPP 224
            PP
Sbjct: 801 VPP 803

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>RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB) (SM11) (Fragment)
          Length = 214

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
 Frame = +3

Query: 3   ARGRACKVAXTPTR-PCAPTIPLFIAGHGQVPPRR---PKIGRPPSGRPLSSQRRLATPT 170
           A      +A  PT+ P     P    G G  PP     P   RPP G P+       TP 
Sbjct: 137 AAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPM 196

Query: 171 ALVPPIFGSRAPSLVSPPW*RG 236
            + PP  G R P    PP  RG
Sbjct: 197 GMPPP--GMRPP----PPGMRG 212

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>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150) (p144) (Formin-binding protein 28) (FBP 28)
          Length = 1100

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = +3

Query: 63  PLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPPW 227
           P F    G  PP RP  GRPP    +        P   +PP  G   P L  PP+
Sbjct: 51  PPFGMMRGPPPPPRPPFGRPPFDPNMPPM----PPPGGIPPPMG--PPHLQRPPF 99

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>MAVS_HUMAN (Q7Z434) Mitochondrial antiviral signaling protein (Interferon-beta|
           promoter stimulator protein 1) (IPS-1) (Virus-induced
           signaling adapter) (CARD adapter inducing
           interferon-beta) (Cardif) (Putative
           NF-kappa-B-activating protein 031N)
          Length = 540

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +2

Query: 95  ATPPQNRPTTVRPPSVIPATAGYSHRPCPSHLWI*GPITGFTP 223
           +T P   PT+ +PP  +P+ A     P PS L I     G  P
Sbjct: 320 STVPSKLPTSSKPPGAVPSNA--LTNPAPSKLPINSTRAGMVP 360

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>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)|
          Length = 637

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 74  RRPRTGAATPPQNRPTTVRPPSVIPATAGYSHRPCPSHL 190
           ++P+  A  PP  R     PP+ +P  A  ++RP P+ L
Sbjct: 23  QKPQKPAYVPPHLR-NRAAPPAAVPPAAPAAYRPSPTGL 60

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>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated|
           transcript 3)
          Length = 1096

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 21/80 (26%)
 Frame = +3

Query: 45  PCAPTIPLFIAGHG-----QVP-----PRRPKIGRP---------PSGRPLSSQ--RRLA 161
           P APT PL   GHG     QVP     P R  I RP         P G P+S      L 
Sbjct: 467 PSAPTGPLGPPGHGQSLGQQVPGFPTAPTRVVIARPTPPQARPSHPGGPPVSGALGAGLG 526

Query: 162 TPTALVPPIFGSRAPSLVSP 221
           T T+L   + G     L+ P
Sbjct: 527 TNTSLAQMVSGLVGQLLMQP 546

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>ZFNL2_ORYSA (Q5JLB5) Zinc finger CCCH type domain-containing protein ZFN-like 2|
          Length = 439

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 92  AATPPQNRPTTVRPPSVIPATAGYSHRP 175
           A TPP   P    PPS +PATA  +  P
Sbjct: 21  APTPPLPPPPPPPPPSQLPATAAATDEP 48

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>WBP11_RAT (Q5PQQ2) WW domain-binding protein 11 (Wbp-11)|
          Length = 641

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 90  VPPRRPKIGRPPSGRPLS-SQRRLATPTALVPPIFGSRAPSLVSPP 224
           +PP RP + RPP   PL  +   L  P  L  P   S  PSL+  P
Sbjct: 499 IPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPSLIQRP 544

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>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +3

Query: 90  VPPRRPKIGRPPSGRPLS-SQRRLATPTALVPPIFGSRAPSLVSPP 224
           +PP RP + RPP   PL  +   L  P  L  P   S  PSL+  P
Sbjct: 499 IPPPRPGMMRPPLVPPLGPAPPGLFPPAPLPNPGVLSAPPSLIQRP 544

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>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 19/55 (34%), Positives = 22/55 (40%)
 Frame = +3

Query: 63  PLFIAGHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPPW 227
           P F    G  PP RP  GRPP    +        P   +PP  G   P L  PP+
Sbjct: 51  PPFGMMRGPPPPPRPPFGRPPFDPNMPPM----PPPGGIPPPMG--PPHLQRPPF 99

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>NETR_PONPY (Q5G269) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 877

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = +2

Query: 65  TLHRRPRTGAATPPQNRPTTVRPPSVIPA------TAGYSHRP----CPS-HLWI*GPIT 211
           T  R PRT    PP   P   RPP  +PA       AG++ RP    CP+   W+   +T
Sbjct: 51  TQQRPPRT---RPPPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWGCPAGEPWV--SVT 105

Query: 212 GF-TPMVTW 235
            F  P + W
Sbjct: 106 DFGAPCLQW 114

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>PO21_POPJA (Q03273) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 445

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 23/59 (38%), Positives = 24/59 (40%), Gaps = 11/59 (18%)
 Frame = +3

Query: 81  HGQVP-----PRRPK------IGRPPSGRPLSSQRRLATPTALVPPIFGSRAPSLVSPP 224
           HG  P     PR P+       G   SGRP  S  R      L P     RAPSL SPP
Sbjct: 379 HGPRPAHHHQPRPPEGQATANTGTLQSGRPALSHSRKKRKRQLTPT---QRAPSLASPP 434

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>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early|
           protein IE110) (VMW110) (Alpha-0 protein)
          Length = 775

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/46 (34%), Positives = 19/46 (41%)
 Frame = +3

Query: 15  ACKVAXTPTRPCAPTIPLFIAGHGQVPPRRPKIGRPPSGRPLSSQR 152
           A   A  P RP A   P   A      PR P  G  P+ RP  ++R
Sbjct: 391 ASAAASGPARPRAAVAPCVRAPPPGPGPRAPAPGAEPAARPADARR 436

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>NETR_PANTR (Q5G271) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 875

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = +2

Query: 65  TLHRRPRTGAATPPQNRPTTVRPPSVIPA------TAGYSHRP----CPS-HLWI*GPIT 211
           T  R PRT    PP   P   RPP  +PA       AG++ RP    CP+   W+   +T
Sbjct: 49  TQQRPPRT---RPPPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWGCPAGEPWV--SVT 103

Query: 212 GF-TPMVTW 235
            F  P + W
Sbjct: 104 DFGAPCLRW 112

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>NETR_HYLLE (Q5G268) Neurotrypsin precursor (EC 3.4.21.-)|
          Length = 875

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 24/69 (34%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
 Frame = +2

Query: 65  TLHRRPRTGAATPPQNRPTTVRPPSVIPA------TAGYSHRP----CPS-HLWI*GPIT 211
           T  R PRT    PP   P   RPP  +PA       AG++ RP    CP+   W+   +T
Sbjct: 49  TQQRPPRT---RPPPPLPRFPRPPRALPAQRPHALQAGHTPRPHPWGCPAGEPWV--SVT 103

Query: 212 GF-TPMVTW 235
            F  P + W
Sbjct: 104 DFGAPCLRW 112

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>SEM6C_MOUSE (Q9WTM3) Semaphorin-6C precursor (Semaphorin Y) (Sema Y)|
          Length = 931

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +3

Query: 78  GHGQVPPRRPKIGRPPSGRPLSSQRRLATPTALVPPIFGSRAPS 209
           G    P  RP +  P     +   RRL  PT   PP   +R PS
Sbjct: 830 GKRAAPSGRPALSAPAPRLGVGGSRRLPFPTHRAPPGLLTRVPS 873

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>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B|
           (snRNP-B) (Sm protein B) (Sm-B) (SmB)
          Length = 231

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 4/82 (4%)
 Frame = +3

Query: 3   ARGRACKVAXTPTR-PCAPTIPLFIAGHGQVPPRR---PKIGRPPSGRPLSSQRRLATPT 170
           A      +A  PT+ P     P    G G  PP     P   RPP G P+       TP 
Sbjct: 154 AAAATASIAGAPTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGLPPGRGTPM 213

Query: 171 ALVPPIFGSRAPSLVSPPW*RG 236
            + PP  G R P    PP  RG
Sbjct: 214 GMPPP--GMRPP----PPGMRG 229

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>RX2_ORYLA (Q9I9A2) Retinal homeobox protein Rx2|
          Length = 327

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 128 RPPSVIPATAGYSHRPCPSHLWI*GPITGFTPMVT 232
           RPP  +P + G    P P   W+  PI+  TPM T
Sbjct: 215 RPP--MPPSVGQVANPMPLDPWLTSPISSATPMHT 247


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,953,203
Number of Sequences: 219361
Number of extensions: 982746
Number of successful extensions: 4717
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 3854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4573
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result