ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9d10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disinteg... 30 4.3
2SP100_HUMAN (P23497) Nuclear autoantigen Sp-100 (Speckled 100 kD... 30 4.3

>ADA19_HUMAN (Q9H013) ADAM 19 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase domain 19) (Meltrin beta)
           (Metalloprotease and disintegrin dentritic antigen
           marker) (MADDAM)
          Length = 956

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -3

Query: 579 KEKEQSSMELSSRRGIANHAATASYWSFILTPLPS*LARRIRGRIYRSVYTR 424
           +E E SS+ LS+ RGI      +S  S+++ PLP    + +   IYRS + +
Sbjct: 121 RETELSSVTLSTCRGIRGLITVSSNLSYVIEPLPDSKGQHL---IYRSEHLK 169



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>SP100_HUMAN (P23497) Nuclear autoantigen Sp-100 (Speckled 100 kDa) (Nuclear|
           dot-associated Sp100 protein) (Lysp100b)
          Length = 879

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +2

Query: 86  EQRLVRPQVPTS*SSGEEEAVRGTSATXREHHHPSRAACERKCSHWRDPTRKER 247
           ++R++      S SS EE     +S   R  H        R  S WR P+RK R
Sbjct: 396 KKRVIGQDHDFSESSEEEAPAEASSGALRSKHGEKAPMTSRSTSTWRIPSRKRR 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,647,655
Number of Sequences: 219361
Number of extensions: 1116963
Number of successful extensions: 2554
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2554
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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