Clone Information

BLAST Search Result

Clone Name	bags8o09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1	204	1e-52
2	RL19C_ARATH (P49693) 60S ribosomal protein L19-3	203	2e-52
3	RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2	203	3e-52
4	RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19	154	1e-46
5	RL19_RAT (P84100) 60S ribosomal protein L19	154	1e-46
6	RL19_PONPY (Q5RB99) 60S ribosomal protein L19	154	1e-46
7	RL19_MOUSE (P84099) 60S ribosomal protein L19	154	1e-46
8	RL19_MACFA (Q8HXN9) 60S ribosomal protein L19	154	1e-46
9	RL19_HUMAN (P84098) 60S ribosomal protein L19	154	1e-46
10	RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19	154	1e-46
11	RL19_BRARE (Q6P5L3) 60S ribosomal protein L19	152	4e-46
12	RL19_ICTPU (Q90YU8) 60S ribosomal protein L19	151	1e-45
13	RL19_DROME (P36241) 60S ribosomal protein L19	159	3e-39
14	RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33...	134	3e-37
15	RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specif...	145	6e-35
16	RL19_CAEEL (O02639) 60S ribosomal protein L19	141	9e-34
17	RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)	137	2e-32
18	RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e	78	1e-19
19	RL19_PYRHO (O59437) 50S ribosomal protein L19e	75	1e-19
20	RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)	75	7e-19
21	RL19_METJA (P54043) 50S ribosomal protein L19e	65	5e-15
22	RL19_METTH (O26129) 50S ribosomal protein L19e	62	3e-14
23	RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)	64	5e-14
24	RL19_ARCFU (O28372) 50S ribosomal protein L19e	55	4e-13
25	RL19_AERPE (Q9YF93) 50S ribosomal protein L19e	46	5e-08
26	RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)	53	4e-07
27	RL19_SULAC (O05639) 50S ribosomal protein L19e	53	5e-07
28	RL19_SULSO (Q9UX89) 50S ribosomal protein L19e	45	1e-04
29	RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)	42	0.001
30	PMIP_YEAST (P35999) Mitochondrial intermediate peptidase, mitoch...	33	0.34
31	RL19E_HALSA (Q9HPB6) 50S ribosomal protein L19e	32	1.0
32	APS_HUMAN (O14492) SH2 and PH domain-containing adapter protein ...	32	1.0
33	Y505_MYCPN (P75281) Hypothetical protein MPN505 (P02_orf253)	30	3.8
34	NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6...	29	6.5
35	1A11_PRUMU (Q9MB95) 1-aminocyclopropane-1-carboxylate synthase 1...	29	6.5
36	EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear a...	29	8.5
37	RFCL_METJA (Q58294) Replication factor C large subunit (RFC larg...	29	8.5
38	PANX1_RAT (P60570) Pannexin-1	29	8.5
39	PANX1_PONPY (Q5REE3) Pannexin-1	29	8.5
40	PANX1_MOUSE (Q9JIP4) Pannexin-1	29	8.5
41	PANX1_HUMAN (Q96RD7) Pannexin-1	29	8.5

>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1|
          Length = 214

 Score =  204 bits (519), Expect = 1e-52
 Identities = 106/165 (64%), Positives = 118/165 (71%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           MVSL  +     + +   + +    P  S+ ISMANSRQNIRKLVKDGFII+KP KI   
Sbjct: 1   MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                   AK KGRHSGYGKR+GTREARLPTK+              KYRE KKIDKHMY
Sbjct: 61  SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           HDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK
Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 165

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>RL19C_ARATH (P49693) 60S ribosomal protein L19-3|
          Length = 208

 Score =  203 bits (517), Expect = 2e-52
 Identities = 106/165 (64%), Positives = 118/165 (71%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           MVSL  +     + L   + +    P   + ISMANSRQNIRKLVKDGFII+KP KI   
Sbjct: 1   MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                   AK+KGRHSGYGKR+GTREARLPTK+              KYRE KKID+HMY
Sbjct: 61  SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           HDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 165

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>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2|
          Length = 209

 Score =  203 bits (516), Expect = 3e-52
 Identities = 105/165 (63%), Positives = 118/165 (71%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           MVSL  +     + +   + +    P  S  ISMANSRQNIRKLVKDGFII+KP KI   
Sbjct: 1   MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                  EAK+KGRHSGYGKR+GTREARLPTKI              KYRE+KKID+HMY
Sbjct: 61  SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           HDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+DQFEAKR K
Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIK 165

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>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19|
          Length = 197

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 76/140 (54%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKLVKDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_RAT (P84100) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_PONPY (Q5RB99) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_MOUSE (P84099) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_HUMAN (P84098) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19|
          Length = 196

 Score =  154 bits (389), Expect(2) = 1e-46
 Identities = 75/140 (53%), Positives = 96/140 (68%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKL+KDG II+KP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YLKVKGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R+K
Sbjct: 146 KADKARKKLLADQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19|
          Length = 196

 Score =  152 bits (385), Expect(2) = 4e-46
 Identities = 76/140 (54%), Positives = 94/140 (67%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKLVKDG IIKKP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGVGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YREAKKID+HMYH +YL+ KGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+KAR+K L+DQ EA+R K
Sbjct: 146 KADKARKKLLADQAEARRTK 165



 Score = 51.6 bits (122), Expect(2) = 4e-46
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19|
          Length = 196

 Score =  151 bits (381), Expect(2) = 1e-45
 Identities = 75/140 (53%), Positives = 95/140 (67%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  +  I+ ANSRQ IRKLVKDG IIKKP  +           A++KGRH G GKR+GT 
Sbjct: 26  PNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSRARCRKNTLARRKGRHMGIGKRKGTA 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+P K+              +YRE+KKID+HMYH +YL+ KGN+FKNKR+LME IHK 
Sbjct: 86  NARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMYHSLYLRAKGNVFKNKRILMEHIHKL 145

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA++AR+K LSDQ EA+R+K
Sbjct: 146 KADRARKKLLSDQAEARRSK 165



 Score = 51.6 bits (122), Expect(2) = 1e-45
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVNE 106
           LQKRLASSVL+CGK KVWLDPNE NE
Sbjct: 6   LQKRLASSVLRCGKKKVWLDPNETNE 31

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>RL19_DROME (P36241) 60S ribosomal protein L19|
          Length = 203

 Score =  159 bits (403), Expect = 3e-39
 Identities = 81/165 (49%), Positives = 103/165 (62%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           M SL  +     + L   + +    P     I+  NSRQNIRKL+KDG IIKKP  +   
Sbjct: 1   MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                  EA++KGRH G+GKR+GT  AR+PTK+              KYR++KKID+H+Y
Sbjct: 61  YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           HD+Y+K KGN+FKNKRVLME IHK KAEK R K L+DQ EA+R K
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQK 165

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>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)|
          Length = 188

 Score =  134 bits (337), Expect(2) = 3e-37
 Identities = 66/140 (47%), Positives = 93/140 (66%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P  ++ I+ ANSR  IRKLVK+G I+KK   +          ++K++GRHSGYGKR+GTR
Sbjct: 25  PNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRAHAQSKREGRHSGYGKRKGTR 84

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
           EARLP+++              KYR+A KIDKH+YH +Y + KGN FK+KR L+E I ++
Sbjct: 85  EARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGNAFKHKRALVEHIIQA 144

Query: 450 KAEKAREKTLSDQFEAKRAK 509
           KA+  REK L+++ EA+R K
Sbjct: 145 KADAQREKALNEEAEARRLK 164



 Score = 40.4 bits (93), Expect(2) = 3e-37
 Identities = 18/25 (72%), Positives = 21/25 (84%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPNEVNE 106
           QKRLA+SV+  GK KVWLDPNE +E
Sbjct: 6   QKRLAASVVGVGKRKVWLDPNETSE 30

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>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein|
           V14) (22 kDa calmodulin-binding protein)
          Length = 186

 Score =  145 bits (366), Expect = 6e-35
 Identities = 77/165 (46%), Positives = 97/165 (58%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           MVSL  +     + L   + R    P     ++MANSR N+R+L+  GFI++KP  +   
Sbjct: 1   MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                   AK+ GRH G G R GTREARLP+KI              KYREAKKIDKH Y
Sbjct: 61  SRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
            ++YLK KGN+FKNKR L+E I KSK EK REK + DQ +A+R K
Sbjct: 121 RELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQAQARRNK 165

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>RL19_CAEEL (O02639) 60S ribosomal protein L19|
          Length = 198

 Score =  141 bits (356), Expect = 9e-34
 Identities = 74/165 (44%), Positives = 98/165 (59%)
 Frame = +3

Query: 15  MVSLNCRSGSPRACLSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXX 194
           M +L  +     A L   + R    P   + IS ANSRQ+IR+LV DG II+KP  +   
Sbjct: 1   MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60

Query: 195 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 374
                  EA++KGRH+GYGKRRGT  AR+P K               +YR+AKK+DKH+Y
Sbjct: 61  FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLY 120

Query: 375 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           H++YL+ KGN FKNK+ L+E I K K E  R K L+DQ +A+R K
Sbjct: 121 HELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDK 165

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>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)|
          Length = 192

 Score =  137 bits (345), Expect = 2e-32
 Identities = 67/151 (44%), Positives = 94/151 (62%)
 Frame = +3

Query: 57  LSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGR 236
           L   + +    P   + IS ANSRQN+RKL+KDG +I+KP  +           AK+ GR
Sbjct: 14  LKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRIRKTHAAKRLGR 73

Query: 237 HSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKN 416
           H+GYGKR+GT EAR+P+ +              KYRE+ KIDKH+YH +YL+ KGN FK+
Sbjct: 74  HTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHTLYLEAKGNTFKH 133

Query: 417 KRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           KR L+E I ++KAE  R K + +Q +A+RA+
Sbjct: 134 KRALIEHIQRAKAEANRTKLIQEQQDARRAR 164



 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 20/25 (80%), Positives = 24/25 (96%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPNEVNE 106
           QKRLA+SVLKCGK KVW+DPNE++E
Sbjct: 6   QKRLAASVLKCGKRKVWMDPNEISE 30

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>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e|
          Length = 151

 Score = 77.8 bits (190), Expect(2) = 1e-19
 Identities = 43/126 (34%), Positives = 63/126 (50%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P R   ++ A +R++IR+L+K+G I KKP K           E K+KGRH G G R+G +
Sbjct: 26  PERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKK 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVLMESIHKS 449
            AR+  K               K +E KKID+  Y  +Y++ KG  FK+K  L   + + 
Sbjct: 86  TARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEH 145

Query: 450 KAEKAR 467
              K R
Sbjct: 146 NLLKKR 151



 Score = 37.4 bits (85), Expect(2) = 1e-19
 Identities = 11/27 (40%), Positives = 23/27 (85%)
 Frame = +2

Query: 26  ELQKRLASSVLKCGKGKVWLDPNEVNE 106
           ++Q+R+A+ +LKCG+ ++W+DP  V++
Sbjct: 5   KMQRRVAAELLKCGENRIWIDPERVDD 31

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>RL19_PYRHO (O59437) 50S ribosomal protein L19e|
          Length = 150

 Score = 75.5 bits (184), Expect(2) = 1e-19
 Identities = 40/113 (35%), Positives = 59/113 (52%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P +   ++ A +R++IR+L+K+G I KKP +           E K+KGRH G G R+G +
Sbjct: 26  PEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSRYRARIRHEQKKKGRHRGPGSRKGKK 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 428
            AR+  K               K +E KKID+  Y  +Y++ KG  FKNK  L
Sbjct: 86  TARMGKKELWIKTIRALRRELRKLKEQKKIDRKTYRMLYIRAKGGQFKNKHQL 138



 Score = 39.7 bits (91), Expect(2) = 1e-19
 Identities = 13/27 (48%), Positives = 24/27 (88%)
 Frame = +2

Query: 26  ELQKRLASSVLKCGKGKVWLDPNEVNE 106
           ++Q+R+A+ +LKCG+ +VW+DP +V+E
Sbjct: 5   KMQRRIAAELLKCGENRVWIDPEKVDE 31

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>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)|
          Length = 150

 Score = 74.7 bits (182), Expect(2) = 7e-19
 Identities = 40/113 (35%), Positives = 58/113 (51%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P R   ++ A +R++I++L+K+G I KKP K           E K+KGRH G G R+G +
Sbjct: 26  PERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKK 85

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNKRVL 428
            AR+  K               K +  KKID+  Y  +Y++ KG  FKNK  L
Sbjct: 86  TARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138



 Score = 38.1 bits (87), Expect(2) = 7e-19
 Identities = 10/27 (37%), Positives = 23/27 (85%)
 Frame = +2

Query: 26  ELQKRLASSVLKCGKGKVWLDPNEVNE 106
           ++Q+R+A+ +LKCG+ ++W+DP  +++
Sbjct: 5   KMQRRIAAEILKCGENRIWIDPERIDD 31

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>RL19_METJA (P54043) 50S ribosomal protein L19e|
          Length = 151

 Score = 65.1 bits (157), Expect(2) = 5e-15
 Identities = 35/110 (31%), Positives = 53/110 (48%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P +   + MA S+ +IR L+K+G I KK +K           E ++KGR  G G RRG  
Sbjct: 28  PTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAA 87

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 419
            AR P K               + R++ KID+ +Y  +Y   KG  F+++
Sbjct: 88  GARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137



 Score = 34.7 bits (78), Expect(2) = 5e-15
 Identities = 11/25 (44%), Positives = 21/25 (84%)
 Frame = +2

Query: 29  LQKRLASSVLKCGKGKVWLDPNEVN 103
           +Q+R+A+ +LKCG  +VW+DP +++
Sbjct: 8   VQRRMAAEILKCGIERVWIDPTQLD 32

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>RL19_METTH (O26129) 50S ribosomal protein L19e|
          Length = 148

 Score = 62.0 bits (149), Expect(2) = 3e-14
 Identities = 34/110 (30%), Positives = 52/110 (47%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P R   +S A +R  +++L+KDG I  KP+K           + K+KGR  G G  +G +
Sbjct: 25  PERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAK 84

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 419
            AR P K               + R+ ++I+K  Y  +Y   KG  FK+K
Sbjct: 85  GARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134



 Score = 35.0 bits (79), Expect(2) = 3e-14
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPNEVNE 106
           QKRLA+ +LK G  ++W+DP  ++E
Sbjct: 6   QKRLAADILKVGVNRIWIDPERIDE 30

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>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)|
          Length = 149

 Score = 64.3 bits (155), Expect(2) = 5e-14
 Identities = 34/110 (30%), Positives = 52/110 (47%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P     + MA ++ +IR L+ DG I+KK +K           E K+KG+  G G RRG +
Sbjct: 25  PENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAK 84

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKNK 419
            AR P K               + RE +KI++  Y  +Y   KG  F+++
Sbjct: 85  GARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134



 Score = 32.0 bits (71), Expect(2) = 5e-14
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPNEVNE 106
           Q+R+A++VL CG  +VW+DP  + +
Sbjct: 6   QRRIAAAVLDCGIDRVWVDPENLEK 30

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>RL19_ARCFU (O28372) 50S ribosomal protein L19e|
          Length = 149

 Score = 54.7 bits (130), Expect(2) = 4e-13
 Identities = 30/109 (27%), Positives = 50/109 (45%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P     I+ A ++Q+IR+L++ G I +KP               K+KGR  G+G R+G +
Sbjct: 28  PAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAK 87

Query: 270 EARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKN 416
            AR+P K               + +    +D+  Y  +Y K KG  F++
Sbjct: 88  GARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136



 Score = 38.5 bits (88), Expect(2) = 4e-13
 Identities = 15/21 (71%), Positives = 19/21 (90%)
 Frame = +2

Query: 29 LQKRLASSVLKCGKGKVWLDP 91
          LQ+RLA+SVLKCG+ +VW DP
Sbjct: 8  LQRRLAASVLKCGENRVWFDP 28

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>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e|
          Length = 155

 Score = 46.2 bits (108), Expect(2) = 5e-08
 Identities = 28/103 (27%), Positives = 45/103 (43%)
 Frame = +3

Query: 108 ISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTREARLPT 287
           I  A ++ ++R L+K G I   P+K             ++KGR  G G+R+G   ARL  
Sbjct: 33  IEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQRRKGRRRGMGRRKGVATARLDP 92

Query: 288 KIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFKN 416
           K                 R+ + ID+  Y  +Y+  KG  F++
Sbjct: 93  KERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135



 Score = 29.6 bits (65), Expect(2) = 5e-08
 Identities = 11/33 (33%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPN-EVNEXLHGQLS 127
           Q+RLA+ +L  G+ ++W+ P+ E+ E + G ++
Sbjct: 6   QRRLAAEILGVGESRIWISPDPELREEIEGAVT 38

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>RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)|
          Length = 62

 Score = 53.1 bits (126), Expect = 4e-07
 Identities = 27/43 (62%), Positives = 30/43 (69%)
 Frame = +3

Query: 57  LSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKI 185
           L   + +    P   + ISMANSRQNIRKLVKDGFIIKKP KI
Sbjct: 12  LKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKI 54



 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 23/27 (85%), Positives = 26/27 (96%)
 Frame = +2

Query: 26  ELQKRLASSVLKCGKGKVWLDPNEVNE 106
           +LQKRLA+S LKCGKGKVWLDPNEV+E
Sbjct: 2   KLQKRLAASYLKCGKGKVWLDPNEVSE 28

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>RL19_SULAC (O05639) 50S ribosomal protein L19e|
          Length = 150

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
 Frame = +3

Query: 90  PMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTR 269
           P R   +  A +R++I+KL+K+  +I  P++           E K K R  G G++ G+R
Sbjct: 26  PERLEEVEEALTREDIKKLIKERAVIVNPKR---GISSGRLKERKHKRRSKGEGRKHGSR 82

Query: 270 EARLPTKIXXXXXXXXXXXXXXKY----REAKKIDKHMYHDMYLKVKGNMFKN----KRV 425
           + +   +               +Y    R+   IDKH Y  +Y + KGN FKN    K  
Sbjct: 83  KGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSY 142

Query: 426 LMESIHK 446
           L +  HK
Sbjct: 143 LRQMGHK 149

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>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e|
          Length = 151

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 1/98 (1%)
 Frame = +3

Query: 123 SRQNIRKLVKDG-FIIKKPQKIXXXXXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXX 299
           +R  IR L+KDG  I+ K   I          +   K      G R+G + AR  +K   
Sbjct: 37  TRDEIRNLIKDGKIIVLKKVGISGGRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMW 96

Query: 300 XXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMFK 413
                         R+ K ID+H Y ++YLK KG  +K
Sbjct: 97  VKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134

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>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)|
          Length = 148

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 29/118 (24%), Positives = 46/118 (38%)
 Frame = +3

Query: 57  LSAARARSGSTPMRSTXISMANSRQNIRKLVKDGFIIKKPQKIXXXXXXXXXXEAKQKGR 236
           L   + R    P R   I+ A +R+++R+LV +G I  K +K           + +  G 
Sbjct: 14  LDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGH 73

Query: 237 HSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDMYLKVKGNMF 410
             G G R+G   AR  +K               + R+   +    Y D+Y K  G  F
Sbjct: 74  QKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 131



 Score = 30.0 bits (66), Expect = 3.8
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +2

Query: 32 QKRLASSVLKCGKGKVWLDP 91
          QKRLA+ VL  GK +VW +P
Sbjct: 6  QKRLAADVLDVGKNRVWFNP 25

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>PMIP_YEAST (P35999) Mitochondrial intermediate peptidase, mitochondrial|
           precursor (EC 3.4.24.59) (MIP)
          Length = 772

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
 Frame = +2

Query: 23  PELQKRLASSVLKCGK--------GKVWLDPNEVNEXLHGQLSPEHSKVGEGWLHHQEAP 178
           PE+  +L++  LK GK          ++++P+   + +  QLS E S VG+ +++H + P
Sbjct: 184 PEVSSKLSAEELKVGKILLDDFEKSGIYMNPDVREKFI--QLSQEISLVGQEFINHTDYP 241

Query: 179 -KDPLKVPCTQSPRGK 223
             + +K+PC      K
Sbjct: 242 GSNSVKIPCKDLDNSK 257

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>RL19E_HALSA (Q9HPB6) 50S ribosomal protein L19e|
          Length = 149

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = +2

Query: 32  QKRLASSVLKCGKGKVWLDPNEVNE 106
           QKRLA+ VL  G+ +VW DP+  +E
Sbjct: 7   QKRLAADVLDVGENRVWFDPDAQSE 31

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>APS_HUMAN (O14492) SH2 and PH domain-containing adapter protein APS (Adapter|
           protein with pleckstrin homology and Src homology 2
           domains)
          Length = 632

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
 Frame = -1

Query: 274 ASLVPLRLPYPEWRPFCFASWALRARDLEWIFWGFLMMKPSFTN---FRMFWRELAMEXL 104
           A+ VP+ +P P+WR FC       A D    F  FL   P++        F R  A   L
Sbjct: 11  AAPVPVPVPVPDWRQFCELHAQAAAVDFAHKFCRFLRDNPAYDTPDAGASFSRHFAANFL 70

Query: 103 VDLIGVEPDLALAALKHARG 44
            D+ G E    L A    RG
Sbjct: 71  -DVFGEEVRRVLVAGPTTRG 89

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>Y505_MYCPN (P75281) Hypothetical protein MPN505 (P02_orf253)|
          Length = 253

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = +3

Query: 348 AKKIDKHMYHDMYLKVKGNMFKNKRVLMES-IHKSKAEKAREKTLSDQFE 494
           AKK DKH Y D++LK+K N    K+   E  + K +  K   K ++   E
Sbjct: 153 AKKGDKH-YFDLFLKIKSNSDPKKQFTTEKFLTKEEKNKVNGKEITRNLE 201

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>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 1)
          Length = 318

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -1

Query: 418 LFLNMLPLTFKYMSWYMCLSIFFA 347
           L+ N LPLT  +  WY+ L IF A
Sbjct: 289 LWKNFLPLTLAFCMWYISLPIFLA 312

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>1A11_PRUMU (Q9MB95) 1-aminocyclopropane-1-carboxylate synthase 1 (EC 4.4.1.14)|
           (ACC synthase) (S-adenosyl-L-methionine
           methylthioadenosine-lyase)
          Length = 492

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = +2

Query: 17  GFPELQKRLASSVLKCGKGKVWLDPNEV 100
           GFPE +K +A  + K   G+V  DPN V
Sbjct: 96  GFPEFRKAVAMFMSKARGGRVTFDPNRV 123

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>EBNA3_EBV (P12977) Epstein-Barr nuclear antigen 3 (EBV nuclear antigen 3)|
           (EBNA-3) (EBNA-3A)
          Length = 812

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 31/106 (29%), Positives = 40/106 (37%), Gaps = 14/106 (13%)
 Frame = +2

Query: 170 EAPKDPLKVPCTQSPRG-KTEGPPFWIW*AQGY---KGG*ASHQDSVDEEDARAQT---- 325
           E+  D   +PC  S  G K + PP +I         + G  + Q     E AR  T    
Sbjct: 226 ESDGDDEDLPCIVSRGGPKVKRPPIFIRRLHRLLLMRAGKRTEQGKEVLEKARGSTYGTP 285

Query: 326 ------PAPQVP*SKEDRQAHVP*HVLEGQG*HVQEQACAYGKHSQ 445
                 P P+VP S E   +H    V E    H+  Q  AY  H Q
Sbjct: 286 RPPVPKPRPEVPQSDETATSHGSAQVPEPPTIHLAAQGMAYPLHEQ 331

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>RFCL_METJA (Q58294) Replication factor C large subunit (RFC large subunit)|
           (Clamp loader large subunit)
          Length = 516

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 390 KVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAK 509
           +VK  + K + V  + + K KAE+ +EK+ +++ E K+ K
Sbjct: 456 EVKAEVEKKEEVKEKIVEKPKAEEVKEKSKTEEKETKKDK 495

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>PANX1_RAT (P60570) Pannexin-1|
          Length = 426

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 190 EWIFWGFLMMKPSFTNFRMFWRELAMEXLVDLIGVEPDLALAALKHAR 47
           E++F  FL+ +P+   F+    ELA++ +V  I V   L L +L  A+
Sbjct: 9   EYVFSDFLLKEPTEPKFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQ 56

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>PANX1_PONPY (Q5REE3) Pannexin-1|
          Length = 426

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 190 EWIFWGFLMMKPSFTNFRMFWRELAMEXLVDLIGVEPDLALAALKHAR 47
           E++F  FL+ +P+   F+    ELA++ +V  I V   L L +L  A+
Sbjct: 9   EYVFSDFLLKEPTEPKFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQ 56

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>PANX1_MOUSE (Q9JIP4) Pannexin-1|
          Length = 426

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 190 EWIFWGFLMMKPSFTNFRMFWRELAMEXLVDLIGVEPDLALAALKHAR 47
           E++F  FL+ +P+   F+    ELA++ +V  I V   L L +L  A+
Sbjct: 9   EYVFSDFLLKEPTEPKFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQ 56

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>PANX1_HUMAN (Q96RD7) Pannexin-1|
          Length = 426

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -1

Query: 190 EWIFWGFLMMKPSFTNFRMFWRELAMEXLVDLIGVEPDLALAALKHAR 47
           E++F  FL+ +P+   F+    ELA++ +V  I V   L L +L  A+
Sbjct: 9   EYVFSDFLLKEPTEPKFKGLRLELAVDKMVTCIAVGLPLLLISLAFAQ 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,038,909
Number of Sequences: 219361
Number of extensions: 1250616
Number of successful extensions: 3998
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 3834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3985
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result