Clone Name | bags8o03 |
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Clone Library Name | barley_pub |
>ref|XM_467194.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 549 bits (277), Expect = e-153 Identities = 505/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 985 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1043 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1044 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1103 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1104 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1163 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1164 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1223 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1224 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1283 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1284 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1343 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1344 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1403 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1404 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1463 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1464 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1523 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1524 cttgttatgacaacccagcttacagtaactcttttgatgt 1563
>ref|XM_507519.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2163 Score = 549 bits (277), Expect = e-153 Identities = 505/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 985 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1043 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1044 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1103 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1104 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1163 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1164 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1223 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1224 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1283 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1284 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1343 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1344 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1403 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1404 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1463 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1464 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1523 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1524 cttgttatgacaacccagcttacagtaactcttttgatgt 1563
>ref|XM_506897.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1717_A09.34 mRNA Length = 2199 Score = 549 bits (277), Expect = e-153 Identities = 505/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 1043 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1101 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1102 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1161 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1162 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1221 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1222 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1281 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1282 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1341 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1342 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1401 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1402 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1461 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1462 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1521 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1522 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1581 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1582 cttgttatgacaacccagcttacagtaactcttttgatgt 1621
>dbj|AK068513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154D06, full insert sequence Length = 2160 Score = 549 bits (277), Expect = e-153 Identities = 505/580 (87%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 981 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1039 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1040 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1099 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1100 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1159 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1160 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1219 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1220 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1279 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1280 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1339 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1340 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1399 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1400 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1459 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1460 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1519 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1520 cttgttatgacaacccagcttacagtaactcttttgatgt 1559
>dbj|AK098984.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093E04, full insert sequence Length = 2140 Score = 541 bits (273), Expect = e-151 Identities = 504/580 (86%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 984 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1042 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1043 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1102 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1103 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1162 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1163 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1222 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1223 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1282 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1283 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1342 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1343 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1402 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || ||||| |||||||||||||||| Sbjct: 1403 tgggtgacctcaacactgaagctgagaaaaaactaggccggctcgttaaggagaagtatg 1462 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1463 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1522 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1523 cttgttatgacaacccagcttacagtaactcttttgatgt 1562
>dbj|AK119608.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-117-F07, full insert sequence Length = 2199 Score = 533 bits (269), Expect = e-148 Identities = 503/580 (86%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 1043 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1101 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1102 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1161 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||| ||||||||||||||||||||| Sbjct: 1162 tatttgaggttggacctgtttttagagctgagaattcagacactcacaggcatctgtgtg 1221 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1222 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1281 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1282 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1341 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| |||||||||||||||||||||| |||||||||| |||| Sbjct: 1342 tagagacaataaacaggcaatatccatttgaacctctgaagtgtttagagaaaactttga 1401 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1402 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1461 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1462 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1521 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||| Sbjct: 1522 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacaccatgc 1581 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||||||||| |||||||||||||| Sbjct: 1582 cttgttatgacaacccagcttacagtaactcttttgatgt 1621
>dbj|AK100516.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100E07, full insert sequence Length = 2600 Score = 533 bits (269), Expect = e-148 Identities = 503/580 (86%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 1404 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 1462 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 1463 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 1522 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 1523 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 1582 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 ||||| |||| | ||||||||||||||||| ||||| || || ||||||||||| || | Sbjct: 1583 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggtttgcgaca 1642 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||| || |||||||||||||| |||||||||||||||||||| |||| |||| Sbjct: 1643 taatagatggtttgtttgtagcaatatttaaacacttgaatgaaaattgcaagaaagaac 1702 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||| Sbjct: 1703 tagagacaataaacaggcaatatccatttgaacctctgaagtatttagagaaaactttga 1762 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| ||||| || ||||| ||| |||||||||||||||| ||||| ||||| || || | Sbjct: 1763 agctcacgtatgaagaaggaattcaaatgctgaaggaagctggaacagaaatcgaaccca 1822 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| ||||||||||||||||| ||||| || |||||||||||||||||||||| Sbjct: 1823 tgggtgacctcaacactgaagctgagaaaaaactaggccggcttgttaaggagaagtatg 1882 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | ||||||||||||||||||||||| ||||||||||||||||| || ||| ||||||||| Sbjct: 1883 gaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttccacaccatgc 1942 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | | ||||||||| |||||||||||||| Sbjct: 1943 cttgttatgacaaccaagcttacagtaactcttttgatgt 1982
>gb|BT009203.1| Triticum aestivum clone wle1n.pk0021.e6:fis, full insert mRNA sequence Length = 836 Score = 502 bits (253), Expect = e-139 Identities = 365/400 (91%), Gaps = 2/400 (0%) Strand = Plus / Plus Query: 1 ttggtggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcct 60 ||||||||||||||||| |||||||||| ||||||||||| ||||||| ||| ||| Sbjct: 63 ttggtggatcaagtgaacttggtgcatctccattcaagctggc-gtacaattaccaacct 121 Query: 61 gcttgtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggc 120 |||| |||||| || |||| |||| ||||||||| ||||||||||||||||||||||| Sbjct: 122 gcttatttagcgcagtctctacaatcatacaagcaaatgagcatctgtggtggctttggg 181 Query: 121 cgcgtgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctg 180 ||||||||||||| |||||| ||||||||| ||||||| |||||||||||||||||||| Sbjct: 182 cgcgtgtttgaggctggtccggtatttagatcagaaaaatcaaacactcacaggcatcta 241 Query: 181 tgtgagtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgt 240 ||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||| Sbjct: 242 tgtgagtttattgggttggatgcagaaatggagattaaggagcactactttgaggtttgt 301 Query: 241 gatatcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaag 300 |||||||||||| || || |||||||||||||||||||| |||||||||||||||||| Sbjct: 302 gatatcatagattgc-taattgtagcaatattcaaacacccaaatgaaaattgtcagaag 360 Query: 301 gaacttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaacc 360 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 gaactcgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaacg 420 Query: 361 ttgaagctgacgtacgaggaagggattaaaatgctgaagg 400 |||||||| |||||||||||||||||||||||||| |||| Sbjct: 421 ttgaagctaacgtacgaggaagggattaaaatgctcaagg 460
>gb|AY105608.1| Zea mays PCO070562 mRNA sequence Length = 1988 Score = 438 bits (221), Expect = e-120 Identities = 491/580 (84%), Gaps = 1/580 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| |||||||| ||||| ||||||||||||| ||||||||| || ||||||| Sbjct: 860 tggatctagtgaagggggtgcggctgtattcaagcttct-gtacaatggtcaacctgctt 918 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||| |||||||| || || ||||||||||| ||| |||| |||||| |||| || | Sbjct: 919 gtttggcacaatcccctcagttatacaagcaaatggctatctctggtggttttgagcgag 978 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | |||||||| || ||||| |||||||||||||| |||||||| ||||||||||| |||| Sbjct: 979 tatttgaggtcggccctgtgtttagagcagaaaattcaaacacacacaggcatctatgtg 1038 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 |||| |||| | |||||||| |||||||| |||||||| || |||||||| ||||| | Sbjct: 1039 agttcgttggtcttgatgctgaaatggagattaaggagcattattttgaggtctgtgaca 1098 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | |||||||||||||| ||| ||||||| ||||||||| |||||| || |||| |||| Sbjct: 1099 ttatagatggcttattcgtatcaatatttaaacacttgtctgaaaactgcaagaaagaac 1158 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | || ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| | Sbjct: 1159 tcgaatcaataaacaggcagtatccatttgaacctctgaagtatctagacaaaaccttta 1218 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| || || || ||||| ||| ||||| |||||||||||||||| ||||| ||||||| Sbjct: 1219 agctcacttatgaagaaggaattcaaatgttgaaggaagccggaacagaaatcgagccta 1278 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 |||||||||| || || ||||||||||| ||||||||||||||||| | ||| ||||||| Sbjct: 1279 tgggtgacctcaataccgaagctgagaaaaaacttggtcggcttgtcagggaaaagtatg 1338 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 |||||| ||||||||||| ||||| |||||||||||||| || || ||||||||||||| Sbjct: 1339 acacagattttttcatcctgtatcggtatcctttggctgtacgtccgttctacaccatgc 1398 Query: 545 cttgctacgatgatccagcttacagcaactcttttgatgt 584 |||| || || | ||||| |||| ||| ||||||||||| Sbjct: 1399 cttgttatgacaacccagcgtacaccaattcttttgatgt 1438
>gb|BT019019.1| Zea mays clone Contig518.F mRNA sequence Length = 1464 Score = 295 bits (149), Expect = 8e-77 Identities = 446/544 (81%), Gaps = 1/544 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || ||||| |||||| ||||||||||||| |||||| || || ||||||| Sbjct: 429 tggatctagcgaagggggtgcagctgtattcaagcttct-gtacaacggtcaacctgctt 487 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||| |||||||| || || || |||||||| ||| |||| |||||| |||| || | Sbjct: 488 gtttggcacaatcccctcagttgtacaagcaaatggctatctctggtggttttgagcgag 547 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | |||||||| || ||||| |||||||||||||| |||||||| ||||||||||| || | Sbjct: 548 tatttgaggtcggccctgtgtttagagcagaaaattcaaacacacacaggcatctatgcg 607 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggtttgtgata 244 |||| |||| | |||||||| |||||||| |||||||| || |||||||| ||||| | Sbjct: 608 agttcgttggtcttgatgctgaaatggagattaaggagcattattttgaggtctgtgaca 667 Query: 245 tcatagatggcttatttgtagcaatattcaaacacttgaatgaaaattgtcagaaggaac 304 | ||||||||| |||| ||| ||||||| ||||||||| |||||| || |||| |||| Sbjct: 668 ttatagatggcctattcgtatcaatatttaaacacttgtctgaaaactgcaagaaagaac 727 Query: 305 ttgagacaataaataggcagtatccatttgaacctctgaagtacctagagaaaaccttga 364 | || ||||||| ||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct: 728 tcgaatcaataaacaggcagtatccatttgaacctctgaagtatctagacaaaaccttga 787 Query: 365 agctgacgtacgaggaagggattaaaatgctgaaggaagccggaactgaaattgagccta 424 |||| || || || ||||| ||| ||||| |||||||| ||||||| ||||| ||||||| Sbjct: 788 agctcacttatgaagaaggaattcaaatgttgaaggaaaccggaacagaaatcgagccta 847 Query: 425 tgggtgaccttaacactgaagctgagaagaaacttggtcggcttgttaaggagaagtatg 484 ||| | ||| || || ||| |||||| ||| ||||| ||||||| | ||| ||||||| Sbjct: 848 aggggggcctcaataccgaaagtgagaaaaaaattggttggcttgtcagggaaaagtatg 907 Query: 485 gcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacaccatgc 544 | |||| ||||| ||||| |||| ||||||||||||| || || || ||| |||||| Sbjct: 908 acccagatttttttatcctggatcggtatcctttggctggacgtccgttttaccccatgc 967 Query: 545 cttg 548 |||| Sbjct: 968 cttg 971
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 168 bits (85), Expect = 1e-38 Identities = 196/232 (84%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 28134139 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 28134197 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 28134198 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 28134257 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 28134258 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 28134317 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggt 236 ||||| |||| | ||||||||||||||||| ||||| || || |||||||| Sbjct: 28134318 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggt 28134369 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 480 gtatggcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacac 539 |||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 28135749 gtatggaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacac 28135808 Query: 540 catgccttgctacgatgatccagcttacagcaactcttttgatgt 584 ||||||||| || || | ||||||||||| |||||||||||||| Sbjct: 28135809 catgccttgttatgacaacccagcttacagtaactcttttgatgt 28135853 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 233 aggtttgtgatatcatagatggcttatttgtagcaatattcaaacacttgaatgaaaatt 292 ||||||| || || |||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 28134445 aggtttgcgacataatagatggtttgtttgtagcaatatttaaacacttgaatgaaaatt 28134504 Query: 293 gtcagaaggaacttgagacaataaataggcagtatccatttgaacctctgaag 345 | |||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 28134505 gcaagaaagaactagagacaataaacaggcaatatccatttgaacctctgaag 28134557 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 398 aggaagccggaactgaaattgagcctatgggtgaccttaacactgaagctgagaagaaac 457 ||||||| ||||| ||||| || || ||||||||||| ||||||||||||||||| |||| Sbjct: 28135585 aggaagctggaacagaaatcgaacccatgggtgacctcaacactgaagctgagaaaaaac 28135644 Query: 458 ttggtcggcttgttaaggagaagtatg 484 | || |||||||||||||||||||||| Sbjct: 28135645 taggccggcttgttaaggagaagtatg 28135671 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 350 tagagaaaaccttgaagctgacgtacgaggaagggattaaaatgctgaagg 400 |||||||||| |||||||| ||||| || ||||| ||| |||||||||||| Sbjct: 28134662 tagagaaaactttgaagctcacgtatgaagaaggaattcaaatgctgaagg 28134712
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 168 bits (85), Expect = 1e-38 Identities = 196/232 (84%), Gaps = 1/232 (0%) Strand = Plus / Plus Query: 5 tggatcaagtgaaggtggtgcatctgtattcaagctggnagtacaatggccagcctgctt 64 |||||| || |||||||||||| ||||||||||||| |||||||||| ||||| || | Sbjct: 123786 tggatccagcgaaggtggtgcagctgtattcaagcta-cagtacaatggacagccagcat 123844 Query: 65 gtttagcacaatctccccaattatacaagcagatgagcatctgtggtggctttggccgcg 124 |||||||||| ||||| || || || ||||||||| || |||||||| |||| || | Sbjct: 123845 gtttagcacagtctcctcagttgtataagcagatggctatttgtggtgggtttgaacgtg 123904 Query: 125 tgtttgaggttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtg 184 | ||||||||||| ||||| |||||||| || || ||||||||||||||||||||||||| Sbjct: 123905 tatttgaggttggacctgtttttagagctgagaattcaaacactcacaggcatctgtgtg 123964 Query: 185 agtttattgggttggatgctgagatggagatcaaggagcactactttgaggt 236 ||||| |||| | ||||||||||||||||| ||||| || || |||||||| Sbjct: 123965 agtttgttggccttgatgctgagatggagattaaggaacattattttgaggt 124016 Score = 129 bits (65), Expect = 1e-26 Identities = 95/105 (90%) Strand = Plus / Plus Query: 480 gtatggcacagaatttttcatcctctatcgatatcctttggctgtgcgccctttctacac 539 |||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct: 125396 gtatggaacagaatttttcatcctctatcggtatcctttggctgtgcgtcccttctacac 125455 Query: 540 catgccttgctacgatgatccagcttacagcaactcttttgatgt 584 ||||||||| || || | ||||||||||| |||||||||||||| Sbjct: 125456 catgccttgttatgacaacccagcttacagtaactcttttgatgt 125500 Score = 129 bits (65), Expect = 1e-26 Identities = 101/113 (89%) Strand = Plus / Plus Query: 233 aggtttgtgatatcatagatggcttatttgtagcaatattcaaacacttgaatgaaaatt 292 ||||||| || || |||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 124092 aggtttgcgacataatagatggtttgtttgtagcaatatttaaacacttgaatgaaaatt 124151 Query: 293 gtcagaaggaacttgagacaataaataggcagtatccatttgaacctctgaag 345 | |||| ||||| ||||||||||| ||||| ||||||||||||||||||||| Sbjct: 124152 gcaagaaagaactagagacaataaacaggcaatatccatttgaacctctgaag 124204 Score = 101 bits (51), Expect = 3e-18 Identities = 78/87 (89%) Strand = Plus / Plus Query: 398 aggaagccggaactgaaattgagcctatgggtgaccttaacactgaagctgagaagaaac 457 ||||||| ||||| ||||| || || ||||||||||| ||||||||||||||||| |||| Sbjct: 125232 aggaagctggaacagaaatcgaacccatgggtgacctcaacactgaagctgagaaaaaac 125291 Query: 458 ttggtcggcttgttaaggagaagtatg 484 | || |||||||||||||||||||||| Sbjct: 125292 taggccggcttgttaaggagaagtatg 125318 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 350 tagagaaaaccttgaagctgacgtacgaggaagggattaaaatgctgaagg 400 |||||||||| |||||||| ||||| || ||||| ||| |||||||||||| Sbjct: 124309 tagagaaaactttgaagctcacgtatgaagaaggaattcaaatgctgaagg 124359
>dbj|AP004896.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT16I07, TM0040, complete sequence Length = 92281 Score = 69.9 bits (35), Expect = 9e-09 Identities = 107/131 (81%) Strand = Plus / Plus Query: 106 tgtggtggctttggccgcgtgtttgaggttggtcctgtatttagagcagaaaagtcaaac 165 ||||||| ||||||||| || |||||| |||| ||||| ||||||||||| | || Sbjct: 32540 tgtggtgactttggccgtgtttttgagattggccctgtgtttagagcagaggattctttt 32599 Query: 166 actcacaggcatctgtgtgagtttattgggttggatgctgagatggagatcaaggagcac 225 |||||||| |||||||||||||||| || | |||| ||| |||||||| ||| |||| Sbjct: 32600 actcacagacatctgtgtgagtttacaggtcttgatgttgaaatggagattaagaagcat 32659 Query: 226 tactttgaggt 236 ||||||||||| Sbjct: 32660 tactttgaggt 32670 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 322 cagtatccatttgaacctctgaag 345 |||||||||||||||||||||||| Sbjct: 32851 cagtatccatttgaacctctgaag 32874 Score = 46.1 bits (23), Expect = 0.13 Identities = 59/71 (83%) Strand = Plus / Plus Query: 514 cctttggctgtgcgccctttctacaccatgccttgctacgatgatccagcttacagcaac 573 ||||||||||| | || ||||| || ||||| ||||| || |||||||||||| |||| Sbjct: 34766 cctttggctgtaagaccattctatacaatgccctgctatgacaatccagcttacaccaac 34825 Query: 574 tcttttgatgt 584 || |||||||| Sbjct: 34826 tcatttgatgt 34836
>ref|XM_663496.1| Cryptosporidium hominis TU502 aspartate--tRNA ligase (Chro.70181) partial mRNA Length = 1308 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 134 ttggtcctgtatttagagcagaaaagtcaaacactcacaggcatctgtgtgagtttattg 193 |||||||||| || ||||||||||| ||||| |||||||| ||| | ||||||||| ||| Sbjct: 884 ttggtcctgttttcagagcagaaaattcaaatactcacagacatttatgtgagtttgttg 943 Query: 194 g 194 | Sbjct: 944 g 944
>gb|AC143339.12| Medicago truncatula clone mth2-20g20, complete sequence Length = 99993 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 106 tgtggtggctttggccgcgtgtttgaggttggtcctgtatttagagcagaa 156 ||||||| |||||||| || |||||| |||||||||| |||||||||||| Sbjct: 44678 tgtggtgattttggccgtgtttttgagattggtcctgtgtttagagcagaa 44628 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 42656 ttacagcaactcttttgatgt 42636
>ref|XM_950094.1| Theileria annulata strain Ankara aspartyl-tRNA synthetase (TA04845) partial mRNA Length = 1890 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 60 tgcttgtttagcacaatctccccaattata 89 |||||||||||||||||| || |||||||| Sbjct: 720 tgcttgtttagcacaatcaccacaattata 749
>emb|AL671493.12| Mouse DNA sequence from clone RP23-105O4 on chromosome X, complete sequence Length = 220631 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 275 aacacttgaatgaaaattgtca 296 |||||||||||||||||||||| Sbjct: 187698 aacacttgaatgaaaattgtca 187719 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 acttgaatgaaaattgtcag 297 |||||||||||||||||||| Sbjct: 152172 acttgaatgaaaattgtcag 152153
>ref|NM_119268.3| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G31180 transcript variant AT4G31180.2 mRNA, complete cds Length = 2073 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 1600 ttacagcaactcttttgatgt 1620
>ref|NM_179227.1| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G31180 transcript variant AT4G31180.1 mRNA, complete cds Length = 2094 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 1621 ttacagcaactcttttgatgt 1641
>gb|AC115967.11| Mus musculus chromosome 8, clone RP24-72G22, complete sequence Length = 221435 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 150 agcagaaaagtcaaacactcacagg 174 |||||||||||||||||| |||||| Sbjct: 169020 agcagaaaagtcaaacacacacagg 168996
>ref|XM_764297.1| Giardia lamblia ATCC 50803 aspartate-tRNA ligase (GLP_457_16800_18467) partial mRNA Length = 1668 Score = 42.1 bits (21), Expect = 2.0 Identities = 54/65 (83%) Strand = Plus / Plus Query: 88 tacaagcagatgagcatctgtggtggctttggccgcgtgtttgaggttggtcctgtattt 147 |||||||||||| |||||| |||| ||||| || |||| ||| ||||| ||||| ||| Sbjct: 910 tacaagcagatgtgcatctcgagtggttttggtcgtgtgtatgaagttgggcctgtcttt 969 Query: 148 agagc 152 ||||| Sbjct: 970 agagc 974
>gb|AC090496.28| Mus musculus strain C57BL/6J clone rp23-469n6 map 14, complete sequence Length = 180338 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 229 tttgaggtttgtgatatcatagatggctt 257 ||||| |||||||||||||| |||||||| Sbjct: 84493 tttgatgtttgtgatatcatcgatggctt 84521
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 114773 ttacagcaactcttttgatgt 114793
>gb|AY072331.1| Arabidopsis thaliana aspartate--tRNA ligase - like protein (At4g31180) mRNA, complete cds Length = 1496 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 1086 ttacagcaactcttttgatgt 1106
>ref|XM_703217.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 4 (LOC564987), mRNA Length = 2327 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcct 546 |||||||| | |||||||||||||||||| Sbjct: 1419 tggctgtgaggcctttctacaccatgcct 1447 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 457 cttggtcggcttgttaaggagaagtatg 484 |||||||| ||||| ||||||||||||| Sbjct: 1358 cttggtcgtcttgtaaaggagaagtatg 1385
>ref|XM_703216.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 3 (LOC564987), mRNA Length = 1804 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcct 546 |||||||| | |||||||||||||||||| Sbjct: 896 tggctgtgaggcctttctacaccatgcct 924 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 457 cttggtcggcttgttaaggagaagtatg 484 |||||||| ||||| ||||||||||||| Sbjct: 835 cttggtcgtcttgtaaaggagaagtatg 862
>ref|XM_681127.1| PREDICTED: Danio rerio similar to Aspartyl-tRNA synthetase (Aspartate--tRNA ligase) (AspRS), transcript variant 1 (LOC564987), mRNA Length = 2300 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcct 546 |||||||| | |||||||||||||||||| Sbjct: 1392 tggctgtgaggcctttctacaccatgcct 1420 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 457 cttggtcggcttgttaaggagaagtatg 484 |||||||| ||||| ||||||||||||| Sbjct: 1331 cttggtcgtcttgtaaaggagaagtatg 1358
>emb|BX827589.1|CNS0A2S7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZB05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1903 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 1581 ttacagcaactcttttgatgt 1601
>gb|BT002567.1| Arabidopsis thaliana aspartate--tRNA ligase - like protein (At4g31180) mRNA, complete cds Length = 1271 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 564 ttacagcaactcttttgatgt 584 ||||||||||||||||||||| Sbjct: 945 ttacagcaactcttttgatgt 965
>emb|BX001069.5| Zebrafish DNA sequence from clone DKEY-280J14 in linkage group 9, complete sequence Length = 146096 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 518 tggctgtgcgccctttctacaccatgcct 546 |||||||| | |||||||||||||||||| Sbjct: 43881 tggctgtgaggcctttctacaccatgcct 43853
>ref|NM_118821.4| Arabidopsis thaliana ATP binding / aspartate-tRNA ligase/ nucleic acid binding / tRNA ligase AT4G26870 mRNA, complete cds Length = 1851 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 cgcgtgtttgaggttggtcctgtatttagagc 152 ||||| ||||||||||||||||| || ||||| Sbjct: 912 cgcgtctttgaggttggtcctgttttcagagc 943
>ref|NM_120403.1| Arabidopsis thaliana protein binding / signal transducer AT5G03250 mRNA, complete cds Length = 1779 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctgagaagaaacttggtcgg 465 |||||||||||||||||||| Sbjct: 926 ctgagaagaaacttggtcgg 907
>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence Length = 157233 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 ctcacaggcatctgtgtgag 186 |||||||||||||||||||| Sbjct: 86674 ctcacaggcatctgtgtgag 86693
>gb|BC075373.1| Xenopus tropicalis aspartyl-tRNA synthetase, mRNA (cDNA clone MGC:89086 IMAGE:7006117), complete cds Length = 2024 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcc 545 |||||||||| || |||||||||||||| Sbjct: 1350 tggctgtgcgacccttctacaccatgcc 1377
>gb|BC064273.1| Xenopus tropicalis aspartyl-tRNA synthetase, mRNA (cDNA clone MGC:76305 IMAGE:5379725), complete cds Length = 2023 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcc 545 |||||||||| || |||||||||||||| Sbjct: 1347 tggctgtgcgacccttctacaccatgcc 1374
>ref|XM_756821.1| Ustilago maydis 521 hypothetical protein (UM05767.1) partial mRNA Length = 4686 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 gaagaaacttggtcggcttg 469 |||||||||||||||||||| Sbjct: 361 gaagaaacttggtcggcttg 342
>emb|Z22178.2|CEF54C8 Caenorhabditis elegans Cosmid F54C8, complete sequence Length = 23001 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 440 ctgaagctgagaagaaactt 459 |||||||||||||||||||| Sbjct: 18725 ctgaagctgagaagaaactt 18706
>gb|BT000939.1| Arabidopsis thaliana clone C105093 putative aspartate-tRNA ligase (At4g26870) mRNA, complete cds Length = 1630 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 cgcgtgtttgaggttggtcctgtatttagagc 152 ||||| ||||||||||||||||| || ||||| Sbjct: 883 cgcgtctttgaggttggtcctgttttcagagc 914
>gb|AC034122.12| Mus musculus chromosome 1, clone RP23-169C19, complete sequence Length = 208469 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cgaggaagggattaaaatgc 394 |||||||||||||||||||| Sbjct: 97227 cgaggaagggattaaaatgc 97246
>ref|XM_503144.1| Yarrowia lipolytica CLIB122, YALI0D22264g predicted mRNA Length = 1695 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcc 545 |||| ||||| ||||||||||||||||| Sbjct: 1370 tggccgtgcgacctttctacaccatgcc 1397
>gb|AY063809.1| Arabidopsis thaliana At4g26870 mRNA sequence Length = 1829 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 cgcgtgtttgaggttggtcctgtatttagagc 152 ||||| ||||||||||||||||| || ||||| Sbjct: 908 cgcgtctttgaggttggtcctgttttcagagc 939
>ref|NM_203975.1| Xenopus tropicalis aspartyl-tRNA synthetase (dars), mRNA Length = 2023 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcc 545 |||||||||| || |||||||||||||| Sbjct: 1347 tggctgtgcgacccttctacaccatgcc 1374
>emb|AL163002.1|ATF15A17 Arabidopsis thaliana DNA chromosome 5, BAC clone F15A17 (ESSA project) Length = 99008 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctgagaagaaacttggtcgg 465 |||||||||||||||||||| Sbjct: 78940 ctgagaagaaacttggtcgg 78921
>emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 66 Length = 198372 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 cgcgtgtttgaggttggtcctgtatttagagc 152 ||||| ||||||||||||||||| || ||||| Sbjct: 10368 cgcgtctttgaggttggtcctgttttcagagc 10399
>emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome 4, BAC clone F10M23 (ESSA project) Length = 128574 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 121 cgcgtgtttgaggttggtcctgtatttagagc 152 ||||| ||||||||||||||||| || ||||| Sbjct: 54525 cgcgtctttgaggttggtcctgttttcagagc 54556
>gb|AC091209.3| Drosophila melanogaster 3L BAC RP98-3G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194979 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 114713 agcctgcttgtttggcacaatctc 114690
>gb|AC010071.6| Drosophila melanogaster 3L BAC RP98-18G16 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172540 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 141832 agcctgcttgtttggcacaatctc 141855
>gb|AC108152.4| Homo sapiens BAC clone RP11-511F16 from 4, complete sequence Length = 10275 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gaggaagggattaaaatgct 395 |||||||||||||||||||| Sbjct: 10106 gaggaagggattaaaatgct 10125
>ref|NM_168605.1| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RB, transcript variant B (Aats-gly), mRNA Length = 2509 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 1685 agcctgcttgtttggcacaatctc 1662
>ref|NM_140489.2| Drosophila melanogaster Glycyl-tRNA synthetase CG6778-RA, transcript variant A (Aats-gly), mRNA Length = 2447 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 1623 agcctgcttgtttggcacaatctc 1600
>gb|AC116608.1| Papio hamadryas chromosome , clone RP41-155I24, complete sequence Length = 161654 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 gagatcaaggagcactactt 230 |||||||||||||||||||| Sbjct: 23037 gagatcaaggagcactactt 23056
>gb|AY051413.1| Drosophila melanogaster GH09263 full length cDNA Length = 2462 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 1623 agcctgcttgtttggcacaatctc 1600
>ref|NM_181932.2| Caenorhabditis elegans F54C8.7b (F54C8.7) mRNA, complete cds Length = 927 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ctgaagctgagaagaaactt 459 |||||||||||||||||||| Sbjct: 386 ctgaagctgagaagaaactt 405
>ref|NM_001027433.1| Caenorhabditis elegans F54C8.7a (F54C8.7) mRNA, complete cds Length = 1111 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 440 ctgaagctgagaagaaactt 459 |||||||||||||||||||| Sbjct: 326 ctgaagctgagaagaaactt 345
>emb|BX088698.22| Mouse DNA sequence from clone RP23-309D15 on chromosome X, complete sequence Length = 184201 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 467 ttgttaaggagaagtatggc 486 |||||||||||||||||||| Sbjct: 7110 ttgttaaggagaagtatggc 7129
>gb|AC079835.5| Homo sapiens BAC clone RP11-15O17 from 4, complete sequence Length = 165047 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 376 gaggaagggattaaaatgct 395 |||||||||||||||||||| Sbjct: 1831 gaggaagggattaaaatgct 1850
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 gatggagatcaaggagcact 226 |||||||||||||||||||| Sbjct: 42841 gatggagatcaaggagcact 42822
>dbj|AB005240.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MOK16 Length = 80770 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 ctgagaagaaacttggtcgg 465 |||||||||||||||||||| Sbjct: 50079 ctgagaagaaacttggtcgg 50060
>emb|AL929569.13| Mouse DNA sequence from clone RP23-325I3 on chromosome 2, complete sequence Length = 166963 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 cctgcttgtttagcacaatc 77 |||||||||||||||||||| Sbjct: 75406 cctgcttgtttagcacaatc 75425
>gb|AE003532.3| Drosophila melanogaster chromosome 3L, section 53 of 83 of the complete sequence Length = 295875 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 agcctgcttgtttagcacaatctc 79 ||||||||||||| |||||||||| Sbjct: 175266 agcctgcttgtttggcacaatctc 175243
>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence Length = 278172 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 aggaagggattaaaatgctg 396 |||||||||||||||||||| Sbjct: 181983 aggaagggattaaaatgctg 182002
>gb|AC117749.6| Mus musculus chromosome 1, clone RP24-319I19, complete sequence Length = 174793 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 cgaggaagggattaaaatgc 394 |||||||||||||||||||| Sbjct: 33462 cgaggaagggattaaaatgc 33481
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 7.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 518 tggctgtgcgccctttctacaccatgcc 545 |||| ||||| ||||||||||||||||| Sbjct: 2826353 tggccgtgcgacctttctacaccatgcc 2826380 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,602,157 Number of Sequences: 3902068 Number of extensions: 5602157 Number of successful extensions: 104657 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104484 Number of HSP's gapped (non-prelim): 158 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)