ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9d02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_482823.1| Oryza sativa (japonica cultivar-group), mRNA 410 e-111
2ref|XM_507261.1| PREDICTED Oryza sativa (japonica cultivar-group... 410 e-111
3dbj|AK102612.1| Oryza sativa (japonica cultivar-group) cDNA clon... 410 e-111
4dbj|AK059195.1| Oryza sativa (japonica cultivar-group) cDNA clon... 410 e-111
5gb|BT018957.1| Zea mays clone Contig188.F mRNA sequence 394 e-106
6gb|AY110091.1| Zea mays CL19870_1 mRNA sequence 343 4e-91
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 250 5e-63
8dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic D... 250 5e-63
9dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic D... 250 5e-63
10emb|AJ719134.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-31-39... 80 9e-12
11ref|NM_180235.1| Arabidopsis thaliana unknown protein AT3G12050 ... 60 9e-06
12ref|NM_112039.2| Arabidopsis thaliana unknown protein AT3G12050 ... 60 9e-06
13gb|BT000045.1| Arabidopsis thaliana unknown protein (At3g12050) ... 60 9e-06
14gb|AY120721.1| Arabidopsis thaliana unknown protein (At3g12050) ... 60 9e-06
15gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21... 60 9e-06
16gb|AY087796.1| Arabidopsis thaliana clone 38478 mRNA, complete s... 60 9e-06
17dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 60 9e-06
18gb|DQ019484.1| Lilium longiflorum clone LP27 unknown mRNA 54 5e-04
19gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, comp... 42 2.1
20gb|BT017872.1| Zea mays clone EL01N0513A06.c mRNA sequence 42 2.1
21gb|BC077605.1| Xenopus laevis MGC84524 protein, mRNA (cDNA clone... 42 2.1
22gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, com... 42 2.1
23emb|AJ851461.1| Gallus gallus mRNA for hypothetical protein, clo... 42 2.1
24gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, comple... 42 2.1
25gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, r... 42 2.1
26gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16... 42 2.1
27gb|BC077988.1| Xenopus laevis achalasia, adrenocortical insuffic... 40 8.1
28gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence 40 8.1
29gb|AC103580.4| Trypanosoma brucei chromosome 4 clone RPCI93-5E12... 40 8.1
30gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, co... 40 8.1
31gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, com... 40 8.1
32gb|AC044805.4| Mus musculus strain C57BL6/J chromosome 5 clone R... 40 8.1
33ref|XM_821713.1| Trypanosoma brucei TREU927 clone RPCI93-5E12 hy... 40 8.1
34gb|AC124488.3| Mus musculus BAC clone RP23-452K20 from chromosom... 40 8.1
35gb|AC121611.3| Mus musculus BAC clone RP23-330I2 from chromosome... 40 8.1
36ref|NM_007349.3| Homo sapiens PAX interacting (with transcriptio... 40 8.1
37gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, comp... 40 8.1
38emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chr... 40 8.1
39gb|AC117460.7| Homo sapiens 3 BAC RP11-343D2 (Roswell Park Cance... 40 8.1
40emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig... 40 8.1
41emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chr... 40 8.1
42emb|BX640616.1|HSM806644 Homo sapiens mRNA; cDNA DKFZp686E06126 ... 40 8.1
43gb|AC156982.8| Mus musculus chromosome 19, clone RP23-183N3, com... 40 8.1
44emb|BX537346.18| Zebrafish DNA sequence from clone DKEYP-2A6 in ... 40 8.1
45dbj|AK123600.1| Homo sapiens cDNA FLJ41606 fis, clone CTONG30011... 40 8.1
46dbj|AK123044.1| Homo sapiens cDNA FLJ41049 fis, clone PROST20089... 40 8.1
47dbj|AK093584.1| Homo sapiens cDNA FLJ36265 fis, clone THYMU20028... 40 8.1
48gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete s... 40 8.1
49gb|AC093494.1| Homo sapiens chromosome 3 clone RP11-1004I19 map ... 40 8.1
50gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p,... 40 8.1
51gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete... 40 8.1
52gb|AC158236.2| Mus musculus BAC clone RP23-132B15 from chromosom... 40 8.1
53gb|U23862.1|HSU23862 Human clone mcag32 chromosome 7 CTG repeat ... 40 8.1
54gb|BC097686.1| Xenopus laevis cDNA clone MGC:115218 IMAGE:340364... 40 8.1
55gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosom... 40 8.1
56gb|BC033781.1| Homo sapiens PAX interacting (with transcription-... 40 8.1
57gb|AC104463.3| Homo sapiens chromosome 1 clone RP11-569A11, comp... 40 8.1
58emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chrom... 40 8.1
59emb|BX538201.1|HSM806430 Homo sapiens mRNA; cDNA DKFZp686O11215 ... 40 8.1
60gb|AC132230.3| Mus musculus BAC clone RP24-484C13 from 1, comple... 40 8.1
61emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on ch... 40 8.1
62emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chr... 40 8.1
63gb|AC026166.5| Homo sapiens chromosome 3 clone RP11-126L4 map 3p... 40 8.1 
>ref|XM_482823.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1296

 Score =  410 bits (207), Expect = e-111
 Identities = 387/447 (86%)
 Strand = Plus / Plus

                                                                        
Query: 96   aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
            ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 688  aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 747

                                                                        
Query: 156  aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
            || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 748  aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 807

                                                                        
Query: 216  ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
            || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 808  gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 867

                                                                        
Query: 276  gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
            |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 868  gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 927

                                                                        
Query: 336  tggcggtttgggagctgggctgatggtgtccattctacagtcaggttggtgtttgatgag 395
            |||||||| || |||||| | || || || || || || || |||||||| |||||||||
Sbjct: 928  tggcggttcggtagctggccagacggcgtgcactcgacggttaggttggtatttgatgag 987

                                                                        
Query: 396  cctgagtcaggagtgacaataataaagctcaaacaaactgatgtgccagaagaagacagg 455
            |||||||| ||||| ||| | ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 988  cctgagtcgggagttacagtcataagcctcaaacaaactgatgtgccagaggaagacaga 1047

                                                                        
Query: 456  tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
            ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 1048 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 1107

                                       
Query: 516  aggatacgtgcagtgttcggttttggg 542
            |||||||| | |||||| |||||||||
Sbjct: 1108 aggatacgcggagtgtttggttttggg 1134
to top
>ref|XM_507261.1| PREDICTED Oryza sativa (japonica cultivar-group), B1111C03.37 mRNA
          Length = 1462

 Score =  410 bits (207), Expect = e-111
 Identities = 387/447 (86%)
 Strand = Plus / Plus

                                                                        
Query: 96   aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
            ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 797  aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 856

                                                                        
Query: 156  aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
            || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 857  aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 916

                                                                        
Query: 216  ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
            || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 917  gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 976

                                                                        
Query: 276  gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
            |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 977  gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 1036

                                                                        
Query: 336  tggcggtttgggagctgggctgatggtgtccattctacagtcaggttggtgtttgatgag 395
            |||||||| || |||||| | || || || || || || || |||||||| |||||||||
Sbjct: 1037 tggcggttcggtagctggccagacggcgtgcactcgacggttaggttggtatttgatgag 1096

                                                                        
Query: 396  cctgagtcaggagtgacaataataaagctcaaacaaactgatgtgccagaagaagacagg 455
            |||||||| ||||| ||| | ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 1097 cctgagtcgggagttacagtcataagcctcaaacaaactgatgtgccagaggaagacaga 1156

                                                                        
Query: 456  tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
            ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 1157 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 1216

                                       
Query: 516  aggatacgtgcagtgttcggttttggg 542
            |||||||| | |||||| |||||||||
Sbjct: 1217 aggatacgcggagtgtttggttttggg 1243
to top
>dbj|AK102612.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D06, full
            insert sequence
          Length = 1296

 Score =  410 bits (207), Expect = e-111
 Identities = 387/447 (86%)
 Strand = Plus / Plus

                                                                        
Query: 96   aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
            ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 688  aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 747

                                                                        
Query: 156  aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
            || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 748  aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 807

                                                                        
Query: 216  ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
            || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 808  gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 867

                                                                        
Query: 276  gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
            |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 868  gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 927

                                                                        
Query: 336  tggcggtttgggagctgggctgatggtgtccattctacagtcaggttggtgtttgatgag 395
            |||||||| || |||||| | || || || || || || || |||||||| |||||||||
Sbjct: 928  tggcggttcggtagctggccagacggcgtgcactcgacggttaggttggtatttgatgag 987

                                                                        
Query: 396  cctgagtcaggagtgacaataataaagctcaaacaaactgatgtgccagaagaagacagg 455
            |||||||| ||||| ||| | ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 988  cctgagtcgggagttacagtcataagcctcaaacaaactgatgtgccagaggaagacaga 1047

                                                                        
Query: 456  tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
            ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 1048 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 1107

                                       
Query: 516  aggatacgtgcagtgttcggttttggg 542
            |||||||| | |||||| |||||||||
Sbjct: 1108 aggatacgcggagtgtttggttttggg 1134
to top
>dbj|AK059195.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A01, full
            insert sequence
          Length = 1462

 Score =  410 bits (207), Expect = e-111
 Identities = 387/447 (86%)
 Strand = Plus / Plus

                                                                        
Query: 96   aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
            ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 797  aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 856

                                                                        
Query: 156  aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
            || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 857  aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 916

                                                                        
Query: 216  ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
            || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 917  gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 976

                                                                        
Query: 276  gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
            |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 977  gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 1036

                                                                        
Query: 336  tggcggtttgggagctgggctgatggtgtccattctacagtcaggttggtgtttgatgag 395
            |||||||| || |||||| | || || || || || || || |||||||| |||||||||
Sbjct: 1037 tggcggttcggtagctggccagacggcgtgcactcgacggttaggttggtatttgatgag 1096

                                                                        
Query: 396  cctgagtcaggagtgacaataataaagctcaaacaaactgatgtgccagaagaagacagg 455
            |||||||| ||||| ||| | ||||  ||||||||||||||||||||||| |||||||| 
Sbjct: 1097 cctgagtcgggagttacagtcataagcctcaaacaaactgatgtgccagaggaagacaga 1156

                                                                        
Query: 456  tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
            ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 1157 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 1216

                                       
Query: 516  aggatacgtgcagtgttcggttttggg 542
            |||||||| | |||||| |||||||||
Sbjct: 1217 aggatacgcggagtgtttggttttggg 1243
to top
>gb|BT018957.1| Zea mays clone Contig188.F mRNA sequence
          Length = 1329

 Score =  394 bits (199), Expect = e-106
 Identities = 382/443 (86%)
 Strand = Plus / Plus

                                                                        
Query: 100  agaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggagaagt 159
            |||| ||||| || || ||||| ||||| || |||||||| |||||||||||||||||||
Sbjct: 694  agaaaaaggccaaggggaaggacaaggagggcttcaagaccattgagatgacggagaagt 753

                                                                        
Query: 160  tcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaagggtt 219
            || |||||||||| |||||||| |||||||||||||||||||||||||||||||| || |
Sbjct: 754  tctactgccgctcaaaggacatatatgagatcttgatggatgagaacagatggaaagggt 813

                                                                        
Query: 220  tcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctctttgatg 279
            | || ||||||||||||||||||||||  || ||||| ||| | ||||||||||| || |
Sbjct: 814  ttacgcagagcaatgcgaggatcagcagagaggttggaggggaatttagcctcttcgacg 873

                                                                        
Query: 280  ggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaatggc 339
            |||||||||| || || || |||||||||||||||||||||||| |||  || || ||||
Sbjct: 874  ggtccatcactggcgtcaacgaggagctgcaggaagggaagctgattgcacaaaagtggc 933

                                                                        
Query: 340  ggtttgggagctgggctgatggtgtccattctacagtcaggttggtgtttgatgagcctg 399
            ||||||| |||||| |||| ||  |  | ||  | ||| ||||||||||||||||||| |
Sbjct: 934  ggtttggaagctggcctgacggcttgtactcctcggtccggttggtgtttgatgagcccg 993

                                                                        
Query: 400  agtcaggagtgacaataataaagctcaaacaaactgatgtgccagaagaagacaggtatg 459
            |||| ||||| ||||| |||||||||||||||||||||| |||||| ||||||| |||||
Sbjct: 994  agtctggagttacaatcataaagctcaaacaaactgatgggccagaggaagacaagtatg 1053

                                                                        
Query: 460  ggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccagagga 519
            | || ||||||||||| |||||||||||||||||| ||| ||| ||||| |||||| |||
Sbjct: 1054 gaaattcaactgtggtagagaacaccgagagaggcgggagagaactcatattccagcgga 1113

                                   
Query: 520  tacgtgcagtgttcggttttggg 542
            |||| | ||||||||||||||||
Sbjct: 1114 tacgcggagtgttcggttttggg 1136
to top
>gb|AY110091.1| Zea mays CL19870_1 mRNA sequence
          Length = 639

 Score =  343 bits (173), Expect = 4e-91
 Identities = 320/369 (86%)
 Strand = Plus / Minus

                                                                       
Query: 174 aaggacatctatgagatcttgatggatgagaacagatggaagggtttcacacagagcaat 233
           |||||||| |||||||||||||||||||||||||||||||| || || || |||||||||
Sbjct: 625 aaggacatatatgagatcttgatggatgagaacagatggaaagggtttacgcagagcaat 566

                                                                       
Query: 234 gcgaggatcagcaaggatgttggtgggcagtttagcctctttgatgggtccatcacaggt 293
           |||||||||||||  || ||||| ||| | ||||||||||| || ||||||||||| || 
Sbjct: 565 gcgaggatcagcagagaggttggaggggaatttagcctcttcgacgggtccatcactggc 506

                                                                       
Query: 294 gttaatgaggagctgcaggaagggaagctggttgtgcagaaatggcggtttgggagctgg 353
           || || |||||||||||||||||||||||| |||  || || ||||||||||| ||||||
Sbjct: 505 gtcaacgaggagctgcaggaagggaagctgattgcacaaaagtggcggtttggaagctgg 446

                                                                       
Query: 354 gctgatggtgtccattctacagtcaggttggtgtttgatgagcctgagtcaggagtgaca 413
            |||| ||  |  | ||  | ||| ||||||||||||||||||| ||||| ||||| |||
Sbjct: 445 cctgacggcttgtactcctcggtccggttggtgtttgatgagcccgagtctggagttaca 386

                                                                       
Query: 414 ataataaagctcaaacaaactgatgtgccagaagaagacaggtatgggaactcaactgtg 473
           || ||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||
Sbjct: 385 atcataaagctcaaacaaactgatgtgccagaggaagacaagtatggaaattcaactgtg 326

                                                                       
Query: 474 gtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgcagtgttc 533
           || |||||||||||||||||||||| ||| ||||| |||||| ||||||| | |||||||
Sbjct: 325 gtagagaacaccgagagaggctggagagaactcatattccagcggatacgcggagtgttc 266

                    
Query: 534 ggttttggg 542
           |||||||||
Sbjct: 265 ggttttggg 257
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                            
Query: 96       aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
                ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 22773229 aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 22773170

                                                                            
Query: 156      aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
                || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 22773169 aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 22773110

                                                                            
Query: 216      ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
                || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 22773109 gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 22773050

                                                                            
Query: 276      gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
                |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 22773049 gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 22772990

                                  
Query: 336      tggcggtttgggagctgg 353
                |||||||| || ||||||
Sbjct: 22772989 tggcggttcggtagctgg 22772972



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                            
Query: 456      tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
                ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 22770205 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 22770146

                                           
Query: 516      aggatacgtgcagtgttcggttttggg 542
                |||||||| | |||||| |||||||||
Sbjct: 22770145 aggatacgcggagtgtttggttttggg 22770119



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                            
Query: 378      aggttggtgtttgatgagcctgagtcaggagtgacaataataaagctcaaacaaactgat 437
                |||||||| ||||||||||||||||| ||||| ||| | ||||  |||||||||||||||
Sbjct: 22770377 aggttggtatttgatgagcctgagtcgggagttacagtcataagcctcaaacaaactgat 22770318

                                     
Query: 438      gtgccagaagaagacaggtat 458
                |||||||| ||||||||||||
Sbjct: 22770317 gtgccagaggaagacaggtat 22770297
to top
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1116H04
          Length = 140142

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                         
Query: 96    aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
             ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 99871 aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 99812

                                                                         
Query: 156   aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
             || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 99811 aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 99752

                                                                         
Query: 216   ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
             || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 99751 gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 99692

                                                                         
Query: 276   gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
             |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 99691 gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 99632

                               
Query: 336   tggcggtttgggagctgg 353
             |||||||| || ||||||
Sbjct: 99631 tggcggttcggtagctgg 99614



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 456   tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
             ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 96847 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 96788

                                        
Query: 516   aggatacgtgcagtgttcggttttggg 542
             |||||||| | |||||| |||||||||
Sbjct: 96787 aggatacgcggagtgtttggttttggg 96761



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                         
Query: 378   aggttggtgtttgatgagcctgagtcaggagtgacaataataaagctcaaacaaactgat 437
             |||||||| ||||||||||||||||| ||||| ||| | ||||  |||||||||||||||
Sbjct: 97019 aggttggtatttgatgagcctgagtcgggagttacagtcataagcctcaaacaaactgat 96960

                                  
Query: 438   gtgccagaagaagacaggtat 458
             |||||||| ||||||||||||
Sbjct: 96959 gtgccagaggaagacaggtat 96939
to top
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:B1111C03
          Length = 144879

 Score =  250 bits (126), Expect = 5e-63
 Identities = 225/258 (87%)
 Strand = Plus / Minus

                                                                          
Query: 96     aaggagaagaaggcgaatggcaaggataaggaaggattcaagactattgagatgacggag 155
              ||||||||||||||||| |  ||||| ||||||||||||||||| || ||||||||||||
Sbjct: 142023 aaggagaagaaggcgaaggcgaaggacaaggaaggattcaagacgatcgagatgacggag 141964

                                                                          
Query: 156    aagttcaactgccgctccaaggacatctatgagatcttgatggatgagaacagatggaag 215
              || ||| |||||||  | |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 141963 aaattctactgccgtgcgaaggacatgtatgagatcttgatggatgagaacagatggaag 141904

                                                                          
Query: 216    ggtttcacacagagcaatgcgaggatcagcaaggatgttggtgggcagtttagcctcttt 275
              || ||||| ||||||||||||||||| ||||  || || || |||||||| |||||||| 
Sbjct: 141903 gggttcacgcagagcaatgcgaggataagcagagaggtcggagggcagttcagcctcttc 141844

                                                                          
Query: 276    gatgggtccatcacaggtgttaatgaggagctgcaggaagggaagctggttgtgcagaaa 335
              |||||||| ||||  || || ||||||||| ||||||||||||||||| | |||||||| 
Sbjct: 141843 gatgggtcaatcagcggcgtcaatgaggagttgcaggaagggaagctgatcgtgcagaag 141784

                                
Query: 336    tggcggtttgggagctgg 353
              |||||||| || ||||||
Sbjct: 141783 tggcggttcggtagctgg 141766



 Score =  101 bits (51), Expect = 3e-18
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                          
Query: 456    tatgggaactcaactgtggtggagaacaccgagagaggctggaaagagctcatcttccag 515
              ||||| || |||||||||||||||||||| ||| ||||||||| ||| ||||||||||||
Sbjct: 138999 tatggaaattcaactgtggtggagaacacggagcgaggctggagagaactcatcttccag 138940

                                         
Query: 516    aggatacgtgcagtgttcggttttggg 542
              |||||||| | |||||| |||||||||
Sbjct: 138939 aggatacgcggagtgtttggttttggg 138913



 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 73/81 (90%)
 Strand = Plus / Minus

                                                                          
Query: 378    aggttggtgtttgatgagcctgagtcaggagtgacaataataaagctcaaacaaactgat 437
              |||||||| ||||||||||||||||| ||||| ||| | ||||  |||||||||||||||
Sbjct: 139171 aggttggtatttgatgagcctgagtcgggagttacagtcataagcctcaaacaaactgat 139112

                                   
Query: 438    gtgccagaagaagacaggtat 458
              |||||||| ||||||||||||
Sbjct: 139111 gtgccagaggaagacaggtat 139091
to top
>emb|AJ719134.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT2-31-390, cultivar Bright
           Yellow 2
          Length = 336

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                       
Query: 141 attgagatgacggagaagttcaactgccgctccaaggacatctatgagatcttgatggat 200
           |||| |||||||||||||||||| ||| |  | |||||  | | |||||| |||||||||
Sbjct: 332 attgcgatgacggagaagttcaattgcagagcgaaggatttgtttgagattttgatggat 273

                                                       
Query: 201 gagaacagatggaagggtttcacacagagcaatgcgaggatcag 244
           ||||  ||||||||||| ||  ||||||||||||||||||||||
Sbjct: 272 gagaggagatggaagggcttttcacagagcaatgcgaggatcag 229



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 307 tgcaggaagggaagctggttgtgcagaaatggcggtttgggagctgggctgatgg 361
           |||||||||| ||  || |||| ||||| ||||||||||| |||||| |||||||
Sbjct: 166 tgcaggaaggaaaattgattgtacagaattggcggtttggtagctggcctgatgg 112
to top
>ref|NM_180235.1| Arabidopsis thaliana unknown protein AT3G12050 transcript variant
            AT3G12050.2 mRNA, complete cds
          Length = 1316

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 468  actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
            ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 1073 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 1132

                          
Query: 528  gtgttcggttttgg 541
            || ||||| |||||
Sbjct: 1133 gttttcggatttgg 1146
to top
>ref|NM_112039.2| Arabidopsis thaliana unknown protein AT3G12050 transcript variant
            AT3G12050.1 mRNA, complete cds
          Length = 1433

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 468  actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
            ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 1190 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 1249

                          
Query: 528  gtgttcggttttgg 541
            || ||||| |||||
Sbjct: 1250 gttttcggatttgg 1263
to top
>gb|BT000045.1| Arabidopsis thaliana unknown protein (At3g12050) mRNA, complete cds
          Length = 1143

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 468  actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
            ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 1003 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 1062

                          
Query: 528  gtgttcggttttgg 541
            || ||||| |||||
Sbjct: 1063 gttttcggatttgg 1076
to top
>gb|AY120721.1| Arabidopsis thaliana unknown protein (At3g12050) mRNA, complete cds
          Length = 1348

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 468  actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
            ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 1190 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 1249

                          
Query: 528  gtgttcggttttgg 541
            || ||||| |||||
Sbjct: 1250 gttttcggatttgg 1263
to top
>gb|AC069473.4|AC069473 Arabidopsis thaliana chromosome 3 BAC T21B14 genomic sequence, complete
             sequence
          Length = 85657

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                         
Query: 468   actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
             ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 40909 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 40850

                           
Query: 528   gtgttcggttttgg 541
             || ||||| |||||
Sbjct: 40849 gttttcggatttgg 40836
to top
>gb|AY087796.1| Arabidopsis thaliana clone 38478 mRNA, complete sequence
          Length = 1284

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                        
Query: 468  actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
            ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 1098 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 1157

                          
Query: 528  gtgttcggttttgg 541
            || ||||| |||||
Sbjct: 1158 gttttcggatttgg 1171
to top
>dbj|AP002040.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MEC18
          Length = 80099

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 468   actgtggtggagaacaccgagagaggctggaaagagctcatcttccagaggatacgtgca 527
             ||||||||||| ||||| |||||||| |||| ||| || || ||||| ||||| ||||||
Sbjct: 75159 actgtggtggaaaacactgagagaggatggagagatcttatattccataggatccgtgca 75218

                           
Query: 528   gtgttcggttttgg 541
             || ||||| |||||
Sbjct: 75219 gttttcggatttgg 75232
to top
>gb|DQ019484.1| Lilium longiflorum clone LP27 unknown mRNA
          Length = 832

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 59/69 (85%), Gaps = 1/69 (1%)
 Strand = Plus / Plus

                                                                       
Query: 147 atgacggagaagttcaactgccgctccaagg-acatctatgagatcttgatggatgagaa 205
           ||||| |||||||||||||||||  ||  || |||| ||||||||| |||||||||| ||
Sbjct: 674 atgacagagaagttcaactgccggnccggggaacatgtatgagatcctgatggatgataa 733

                    
Query: 206 cagatggaa 214
            ||||||||
Sbjct: 734 nagatggaa 742
to top
>gb|AC114901.8| Mus musculus chromosome 3, clone RP23-33I24, complete sequence
          Length = 168654

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 502    agctcatcttccagaggatacgtgcagtg 530
              ||||| ||||||||||| |||||||||||
Sbjct: 129851 agctcctcttccagaggctacgtgcagtg 129879
to top
>gb|BT017872.1| Zea mays clone EL01N0513A06.c mRNA sequence
          Length = 798

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 6   caccaagctgccccagcggcc 26
           |||||||||||||||||||||
Sbjct: 219 caccaagctgccccagcggcc 239
to top
>gb|BC077605.1| Xenopus laevis MGC84524 protein, mRNA (cDNA clone MGC:84524
            IMAGE:5079355), complete cds
          Length = 3827

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 528  gtgttcggttttggggtctga 548
            |||||||||||||||||||||
Sbjct: 2988 gtgttcggttttggggtctga 3008
to top
>gb|AC159970.4| Mus musculus chromosome 3, clone RP23-301J11, complete sequence
          Length = 191207

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 502    agctcatcttccagaggatacgtgcagtg 530
              ||||| ||||||||||| |||||||||||
Sbjct: 114731 agctcctcttccagaggctacgtgcagtg 114703
to top
>emb|AJ851461.1| Gallus gallus mRNA for hypothetical protein, clone 3j7
          Length = 5893

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 31   gcgcagctgttgctcccgctc 51
            |||||||||||||||||||||
Sbjct: 2155 gcgcagctgttgctcccgctc 2135
to top
>gb|AC093874.3| Homo sapiens BAC clone RP11-624O16 from 4, complete sequence
          Length = 158245

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 178   acatctatgagatcttgatggatga 202
             |||||| ||||||||||||||||||
Sbjct: 86701 acatctctgagatcttgatggatga 86725
to top
>gb|AC009539.6|AC009539 Drosophila melanogaster, chromosome 3R, region 85A-85A, BAC clone
              BACR33N15, complete sequence
          Length = 187701

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 210    tggaagggtttcacacagagc 230
              |||||||||||||||||||||
Sbjct: 117394 tggaagggtttcacacagagc 117414
to top
>gb|AE003678.3| Drosophila melanogaster chromosome 3R, section 16 of 118 of the complete
              sequence
          Length = 244757

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 210    tggaagggtttcacacagagc 230
              |||||||||||||||||||||
Sbjct: 144487 tggaagggtttcacacagagc 144467
to top
>gb|BC077988.1| Xenopus laevis achalasia, adrenocortical insufficiency, alacrimia
            (Allgrove, triple-A), mRNA (cDNA clone MGC:81674
            IMAGE:6864633), complete cds
          Length = 3343

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 528  gtgttcggttttggggtctg 547
            ||||||||||||||||||||
Sbjct: 2247 gtgttcggttttggggtctg 2266
to top
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     cagctccagtgcatgcgcca 89
              ||||||||||||||||||||
Sbjct: 227981 cagctccagtgcatgcgcca 228000
to top
>gb|AC103580.4| Trypanosoma brucei chromosome 4 clone RPCI93-5E12, complete sequence
          Length = 174832

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     cagctccagtgcatgcgcca 89
              ||||||||||||||||||||
Sbjct: 103914 cagctccagtgcatgcgcca 103895
to top
>gb|AC133874.10| Mus musculus chromosome 19, clone RP23-81N16, complete sequence
          Length = 215113

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 90     gcagctaaggagaagaaggcgaat 113
              ||||||||||||||||||| ||||
Sbjct: 186774 gcagctaaggagaagaaggagaat 186751
to top
>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 446    agaagacaggtatgggaact 465
              ||||||||||||||||||||
Sbjct: 120677 agaagacaggtatgggaact 120696
to top
>gb|AC044805.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-282L6, complete
              sequence
          Length = 208526

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 239    gatcagcaaggatgttggtgggca 262
              |||||||||||||| |||||||||
Sbjct: 137628 gatcagcaaggatgatggtgggca 137605
to top
>ref|XM_821713.1| Trypanosoma brucei TREU927 clone RPCI93-5E12 hypothetical protein
           (Tb927.4.800) partial mRNA
          Length = 7788

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 70  cagctccagtgcatgcgcca 89
           ||||||||||||||||||||
Sbjct: 180 cagctccagtgcatgcgcca 161
to top
>gb|AC124488.3| Mus musculus BAC clone RP23-452K20 from chromosome 1, complete
            sequence
          Length = 178446

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 112  atggcaaggataaggaagga 131
            ||||||||||||||||||||
Sbjct: 3307 atggcaaggataaggaagga 3288
to top
>gb|AC121611.3| Mus musculus BAC clone RP23-330I2 from chromosome 6, complete sequence
          Length = 197889

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 396    cctgagtcaggagtgacaat 415
              ||||||||||||||||||||
Sbjct: 170700 cctgagtcaggagtgacaat 170681
to top
>ref|NM_007349.3| Homo sapiens PAX interacting (with transcription-activation domain)
            protein 1 (PAXIP1), mRNA
          Length = 3723

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 67   cagcagctccagtgcatgcgccagcagc 94
            |||||||||||| |||||| ||||||||
Sbjct: 1646 cagcagctccagcgcatgcaccagcagc 1673
to top
>gb|AC114995.7| Mus musculus chromosome 8, clone RP23-171P5, complete sequence
          Length = 242745

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 184    atgagatcttgatggatgagaaca 207
              ||||||||||| ||||||||||||
Sbjct: 208810 atgagatcttgttggatgagaaca 208787
to top
>emb|AL139331.19| Human DNA sequence from clone RP11-328M4 on chromosome 6 Contains a
             novel gene,  the FOXP4 gene for forkhead box P4 and five
             CpG islands, complete sequence
          Length = 180547

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 301   aggagctgcaggaagggaag 320
             ||||||||||||||||||||
Sbjct: 91702 aggagctgcaggaagggaag 91721
to top
>gb|AC117460.7| Homo sapiens 3 BAC RP11-343D2 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 183595

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    agcagctaaggagaagaagg 108
             ||||||||||||||||||||
Sbjct: 97021 agcagctaaggagaagaagg 97002
to top
>emb|BX842634.1| Neurospora crassa DNA linkage group I BAC contig B16B8
          Length = 138191

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 123   aaggaaggattcaagactattgagatga 150
             |||||||||||| |||| ||||||||||
Sbjct: 47578 aaggaaggattcgagacaattgagatga 47551
to top
>emb|AL669853.5| Mouse DNA sequence from clone RP23-204F22 on chromosome 11 Contains part
              of the Abca13 gene for ATP-binding cassette sub-family A
              (ABC1) member 13, complete sequence
          Length = 205759

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    tcaactgtggtggagaacac 484
              ||||||||||||||||||||
Sbjct: 153564 tcaactgtggtggagaacac 153545
to top
>emb|BX640616.1|HSM806644 Homo sapiens mRNA; cDNA DKFZp686E06126 (from clone DKFZp686E06126)
          Length = 5531

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 67   cagcagctccagtgcatgcgccagcagc 94
            |||||||||||| |||||| ||||||||
Sbjct: 3544 cagcagctccagcgcatgcaccagcagc 3571
to top
>gb|AC156982.8| Mus musculus chromosome 19, clone RP23-183N3, complete sequence
          Length = 216311

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 299    tgaggagctgcaggaagggaagctggtt 326
              |||| ||||| |||||||||||||||||
Sbjct: 119678 tgagaagctggaggaagggaagctggtt 119705
to top
>emb|BX537346.18| Zebrafish DNA sequence from clone DKEYP-2A6 in linkage group 1,
             complete sequence
          Length = 102802

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ggattcaagactattgagat 148
             ||||||||||||||||||||
Sbjct: 37518 ggattcaagactattgagat 37537
to top
>dbj|AK123600.1| Homo sapiens cDNA FLJ41606 fis, clone CTONG3001123, highly  similar
            to Mus musculus Pax transcription activation domain
            interacting protein PTIP mRNA
          Length = 3850

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 67   cagcagctccagtgcatgcgccagcagc 94
            |||||||||||| |||||| ||||||||
Sbjct: 1785 cagcagctccagcgcatgcaccagcagc 1812
to top
>dbj|AK123044.1| Homo sapiens cDNA FLJ41049 fis, clone PROST2008993, moderately
            similar to Mus musculus Pax transcription activation
            domain interacting protein PTIP mRNA
          Length = 2477

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 67   cagcagctccagtgcatgcgccagcagc 94
            |||||||||||| |||||| ||||||||
Sbjct: 1691 cagcagctccagcgcatgcaccagcagc 1718
to top
>dbj|AK093584.1| Homo sapiens cDNA FLJ36265 fis, clone THYMU2002841, highly similar
           to Mus musculus Pax transcription activation domain
           interacting protein PTIP mRNA
          Length = 2404

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 67  cagcagctccagtgcatgcgccagcagc 94
           |||||||||||| |||||| ||||||||
Sbjct: 340 cagcagctccagcgcatgcaccagcagc 367
to top
>gb|AC141866.11| Medicago truncatula clone mth2-12p22, complete sequence
          Length = 126907

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     gcgccagcagctaaggagaa 103
              ||||||||||||||||||||
Sbjct: 101604 gcgccagcagctaaggagaa 101623
to top
>gb|AC093494.1| Homo sapiens chromosome 3 clone RP11-1004I19 map 3p, complete sequence
          Length = 159189

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ggattcaagactattgagat 148
             ||||||||||||||||||||
Sbjct: 20904 ggattcaagactattgagat 20923
to top
>gb|AC018841.4| Homo sapiens chromosome 3 clone RP11-7F24 map 3p, complete sequence
          Length = 198264

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    ggattcaagactattgagat 148
              ||||||||||||||||||||
Sbjct: 195557 ggattcaagactattgagat 195576
to top
>gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete sequence
          Length = 159041

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 67    cagcagctccagtgcatgcgccagcagc 94
             |||||||||||| |||||| ||||||||
Sbjct: 42948 cagcagctccagcgcatgcaccagcagc 42921
to top
>gb|AC158236.2| Mus musculus BAC clone RP23-132B15 from chromosome 8, complete sequence
          Length = 209957

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 184    atgagatcttgatggatgagaaca 207
              ||||||||||| ||||||||||||
Sbjct: 200473 atgagatcttgttggatgagaaca 200496
to top
>gb|U23862.1|HSU23862 Human clone mcag32 chromosome 7 CTG repeat region
          Length = 633

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 67  cagcagctccagtgcatgcgccagcagc 94
           |||||||||||| |||||| ||||||||
Sbjct: 397 cagcagctccagcgcatgcaccagcagc 370
to top
>gb|BC097686.1| Xenopus laevis cDNA clone MGC:115218 IMAGE:3403640, complete cds
          Length = 2197

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 529  tgttcggttttggggtctga 548
            ||||||||||||||||||||
Sbjct: 1228 tgttcggttttggggtctga 1247
to top
>gb|AC154436.2| Mus musculus BAC clone RP24-192B24 from chromosome 14, complete
             sequence
          Length = 180476

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 298   atgaggagctgcaggaagggaagc 321
             ||||||||||| ||||||||||||
Sbjct: 53808 atgaggagctgaaggaagggaagc 53831
to top
>gb|BC033781.1| Homo sapiens PAX interacting (with transcription-activation domain)
           protein 1, mRNA (cDNA clone MGC:45592 IMAGE:4509264),
           complete cds
          Length = 2969

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 67  cagcagctccagtgcatgcgccagcagc 94
           |||||||||||| |||||| ||||||||
Sbjct: 887 cagcagctccagcgcatgcaccagcagc 914
to top
>gb|AC104463.3| Homo sapiens chromosome 1 clone RP11-569A11, complete sequence
          Length = 156818

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    cagcagctaaggagaagaag 107
             ||||||||||||||||||||
Sbjct: 80894 cagcagctaaggagaagaag 80875
to top
>emb|AL928661.10| Mouse DNA sequence from clone RP23-3E2 on chromosome 4, complete sequence
          Length = 221208

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 489    agaggctggaaagagctcat 508
              ||||||||||||||||||||
Sbjct: 102266 agaggctggaaagagctcat 102247
to top
>emb|BX538201.1|HSM806430 Homo sapiens mRNA; cDNA DKFZp686O11215 (from clone DKFZp686O11215)
          Length = 2506

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 67  cagcagctccagtgcatgcgccagcagc 94
           |||||||||||| |||||| ||||||||
Sbjct: 422 cagcagctccagcgcatgcaccagcagc 449
to top
>gb|AC132230.3| Mus musculus BAC clone RP24-484C13 from 1, complete sequence
          Length = 177845

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   atggcaaggataaggaagga 131
             ||||||||||||||||||||
Sbjct: 59899 atggcaaggataaggaagga 59918
to top
>emb|CT025528.10| Mouse DNA sequence from clone RP23-205O23 on chromosome 14, complete
              sequence
          Length = 224168

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 298    atgaggagctgcaggaagggaagc 321
              ||||||||||| ||||||||||||
Sbjct: 197136 atgaggagctgaaggaagggaagc 197159
to top
>emb|AL807773.7| Mouse DNA sequence from clone RP23-228L24 on chromosome X, complete
              sequence
          Length = 186645

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 296    taatgaggagctgcaggaag 315
              ||||||||||||||||||||
Sbjct: 172154 taatgaggagctgcaggaag 172173
to top
>gb|AC026166.5| Homo sapiens chromosome 3 clone RP11-126L4 map 3p, complete sequence
          Length = 163864

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 129   ggattcaagactattgagat 148
             ||||||||||||||||||||
Sbjct: 80883 ggattcaagactattgagat 80902


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,713,031
Number of Sequences: 3902068
Number of extensions: 5713031
Number of successful extensions: 113477
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 113315
Number of HSP's gapped (non-prelim): 158
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top