>Y4597_ARATH (P0C042) Hypothetical protein At4g15970|
          Length = 367

 Score =  136 bits (343), Expect = 2e-32
 Identities = 67/153 (43%), Positives = 94/153 (61%), Gaps = 1/153 (0%)
 Frame = +2

Query: 11  GVARLLDHLVIVTMDPAAYAGCQLVHRH-CYFLRTTGVDYRGEKFFMSKDYLEMMWGRNK 187
           G   LL HLV+  +D  AY+ C  VH H CYF++T G+D+ G+K FM+ DYL+MMW R +
Sbjct: 84  GTKPLLRHLVVACLDEEAYSRCSEVHPHRCYFMKTPGIDFAGDKMFMTPDYLKMMWRRIE 143

Query: 188 FQQTILELGYNFLFTDVDVMWFRDPFKHISMGADIAISSDVFIGDPYSLGNFPNGGFLFV 367
           F  T+L+L YNF+FT         PF  +S   D  I+ D + GD   + N  NGGF FV
Sbjct: 144 FLGTLLKLRYNFIFT--------IPFPRLSKEVDFQIACDRYSGDDKDIHNAVNGGFAFV 195

Query: 368 RSCNKTIEFYRHWQAGRYRFFGKHEQDVFNLIK 466
           ++  +TI+FY +W   R R+  +H+QDV + IK
Sbjct: 196 KANQRTIDFYNYWYMSRLRYPDRHDQDVLDQIK 228

>TYSY_COXBU (Q83BG2) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 264

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 299 SSDVFIGDPYSLGNFPNGGFLFVRSCN-KTIEFYRHWQAGRYRFFGKHEQDVFNLIKHE 472
           S+D F+G P+++ ++     L  R CN K  EF   W  G    +  H+  V   +  E
Sbjct: 167 SADAFLGVPFNIASYSLLTHLIARQCNLKAGEFI--WSGGDCHIYNTHQDQVSTQLSRE 223

>RL25_BACTN (Q89YZ1) 50S ribosomal protein L25 (General stress protein CTC)|
          Length = 196

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 475 HLVLDEVEHVLFVLAEEAVPSGLPVPVELDGL 380
           H V D + HV F   +EA P  + VPV+L+GL
Sbjct: 84  HPVKDNILHVDFYQIDEAKPIVMEVPVQLEGL 115

>CP2H1_CHICK (P05180) Cytochrome P450 2H1 (EC 1.14.14.1) (CYPIIH1) (PB15) (P450|
           PCHP3)
          Length = 491

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 122 DYRGEKFFMSKDYLEMMWGRNKFQQTILELGYNFLFTDVD 241
           DY  +KF    D +EM+   NK+Q  I  L YNF  T +D
Sbjct: 191 DYEDKKFL---DLIEMLEENNKYQNRIQTLLYNFFPTILD 227

>RL25_BACFR (Q64X29) 50S ribosomal protein L25 (General stress protein CTC)|
          Length = 196

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/32 (46%), Positives = 20/32 (62%)
 Frame = -2

Query: 475 HLVLDEVEHVLFVLAEEAVPSGLPVPVELDGL 380
           H V D + HV F   +EA P  + VPV+L+GL
Sbjct: 84  HPVKDTILHVDFYQIDEAKPIVMEVPVQLEGL 115

>HEMA_CVRSD (Q9IKD2) Hemagglutinin-esterase precursor (EC 3.1.1.53) (HE) (E3|
           glycoprotein)
          Length = 439

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 28/100 (28%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
 Frame = +2

Query: 53  DPAAYAGCQLVHRHCYFLRTTGVDYRGEKFFMSKDYLEMMWGRNKFQQTILELGYN---- 220
           D      CQL +  C+F R T  DY G       D  ++  G   F+Q +  L YN    
Sbjct: 315 DNMTAVACQLPY--CFF-RNTSADYSG-------DTHDVHHGDFYFRQLLSGLLYNVSCI 364

Query: 221 -----FLFTDVDVMWFRDPFKHISMGADIAISSDVFIGDP 325
                FL+ +V  +W    + H    A+I   + V + DP
Sbjct: 365 AQQGAFLYNNVSSIWPVYGYGHCPTAANIGYMAPVCLYDP 404

>TAF5L_MOUSE (Q91WQ5) TAF5-like RNA polymerase II p300/CBP-associated|
           factor-associated factor 65 kDa subunit 5L
           (PCAF-associated factor 65 beta) (PAF65-beta)
          Length = 589

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 28/114 (24%), Positives = 42/114 (36%), Gaps = 10/114 (8%)
 Frame = +2

Query: 149 SKDYLEMMWGRNKFQQTILELGYNFLFTDVDVMWFRDPFKHISMGADIAISS-------D 307
           S+D     W    F  T+L  G+ +   DVD+  F   F   S      + S        
Sbjct: 361 SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPFSLYFASGSHDRTARLWSFDRTYPLR 420

Query: 308 VFIG---DPYSLGNFPNGGFLFVRSCNKTIEFYRHWQAGRYRFFGKHEQDVFNL 460
           ++ G   D   +   PN  +L   S +KT+  +   Q    R F  H   V +L
Sbjct: 421 IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSL 474

>HIS82_GLUOX (Q5FQA6) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase 2)
          Length = 355

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 251 FRDPFKHISMGADIAISSDVFIGD 322
           F  PF+HI +  D AI  D + GD
Sbjct: 121 FEQPFRHIPLNDDFAIDIDAYTGD 144

>METE_CHRVO (Q7NS23) 5-methyltetrahydropteroyltriglutamate--homocysteine|
           methyltransferase (EC 2.1.1.14) (Methionine synthase,
           vitamin-B12 independent isozyme) (Cobalamin-independent
           methionine synthase)
          Length = 760

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 7/52 (13%)
 Frame = +1

Query: 115 RRRLPRREV-------LHEQGLPRDDVGPQQVPADHP*ARIQLPLHGRGRDV 249
           R  LPRREV       L+++ L  +  G + +  D P  R  LPL   GRDV
Sbjct: 567 RDDLPRREVCRQIALALNDEVLDLEAAGIRVIQIDEPAIREGLPLKRAGRDV 618


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,006,345
Number of Sequences: 219361
Number of extensions: 998783
Number of successful extensions: 3053
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3048
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)