Clone Name | bags8n24 |
---|---|
Clone Library Name | barley_pub |
>RL14_PEA (P55844) Probable 60 ribosomal protein L14 (Hydroxyproline-rich| glycoprotein HRGP1) Length = 133 Score = 98.2 bits (243), Expect = 4e-21 Identities = 47/63 (74%), Positives = 53/63 (84%) Frame = +3 Query: 9 LIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 LIKA+E ADVK KW SSWG+KLIV+K RA+LNDFDRFK+MLAKIKR +RQELAKLKK Sbjct: 71 LIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKK 130 Query: 189 EVA 197 A Sbjct: 131 TAA 133
>RL14_RAT (Q63507) 60S ribosomal protein L14| Length = 213 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/58 (48%), Positives = 40/58 (68%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 KA E+AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R I+ E+ KL++ Sbjct: 74 KAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 131
>RL14_MOUSE (Q9CR57) 60S ribosomal protein L14| Length = 216 Score = 62.4 bits (150), Expect = 3e-10 Identities = 28/58 (48%), Positives = 40/58 (68%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 KA E+AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R I+ E+ KL++ Sbjct: 74 KAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 131
>RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7)| Length = 212 Score = 61.2 bits (147), Expect = 6e-10 Identities = 27/58 (46%), Positives = 40/58 (68%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 +A ++AD+ TKW + W KK+ ++R+A + DFDRFKVM AK R I+ E+ KL+K Sbjct: 74 QAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 131
>RL14_GRIJA (Q7XYA7) 60S ribosomal protein L14| Length = 133 Score = 57.0 bits (136), Expect = 1e-08 Identities = 28/52 (53%), Positives = 38/52 (73%) Frame = +3 Query: 30 ADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLK 185 A V + S WGKKL +++RA+L+DF RFKVM+A++K+ AI ELAKLK Sbjct: 81 AKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132
>RL14_LUMRU (O46160) 60S ribosomal protein L14| Length = 152 Score = 53.5 bits (127), Expect = 1e-07 Identities = 25/58 (43%), Positives = 37/58 (63%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 KA E+ ++ KWE S KK+ +++R +L DF+RFK+M AK R I+ E KL+K Sbjct: 75 KAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132
>RL14B_YEAST (P38754) 60S ribosomal protein L14-B| Length = 138 Score = 52.4 bits (124), Expect = 3e-07 Identities = 25/59 (42%), Positives = 39/59 (66%) Frame = +3 Query: 3 ATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAK 179 AT+ K A V KW SSW KK+ ++RRA+L DF+RF+VM+ + ++ +++ LAK Sbjct: 79 ATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
>RL14A_YEAST (P36105) 60S ribosomal protein L14-A| Length = 138 Score = 52.0 bits (123), Expect = 4e-07 Identities = 25/59 (42%), Positives = 39/59 (66%) Frame = +3 Query: 3 ATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAK 179 AT+ K A V KW SSW KK+ ++RRA+L DF+RF+VM+ + ++ +++ LAK Sbjct: 79 ATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137
>RL14_SCHPO (O94238) 60S ribosomal protein L14| Length = 134 Score = 50.8 bits (120), Expect = 8e-07 Identities = 26/58 (44%), Positives = 34/58 (58%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188 K + DV KW +S+W KKL +K R+ LNDFDRF VM K +R + +AK K Sbjct: 76 KKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQVNVAVAKALK 133
>RL14_DROME (P55841) 60S ribosomal protein L14| Length = 166 Score = 48.9 bits (115), Expect = 3e-06 Identities = 27/65 (41%), Positives = 36/65 (55%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194 KA E+D+K +W+ S W K +R+SLNDFDRFK+ AK +R + LKK Sbjct: 75 KAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRT 134 Query: 195 AA*NT 209 A T Sbjct: 135 KADGT 139
>RL14_DROVI (Q95ZE8) 60S ribosomal protein L14| Length = 160 Score = 44.7 bits (104), Expect = 6e-05 Identities = 24/65 (36%), Positives = 35/65 (53%) Frame = +3 Query: 15 KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194 KA ++D+K +W+ S W K +R+ LNDFDRFK+ AK +R + LKK Sbjct: 75 KAWVDSDLKAQWKVSPWSVKAQNICKRSQLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRT 134 Query: 195 AA*NT 209 + T Sbjct: 135 KSDGT 139
>JHD3B_DROME (Q9V6L0) Probable JmjC domain-containing histone demethylation| protein 3B (EC 1.14.11.-) Length = 452 Score = 29.6 bits (65), Expect = 1.9 Identities = 14/47 (29%), Positives = 21/47 (44%) Frame = -2 Query: 152 TPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLD 12 +P L QHD+ K+ Q ++ PFG+H F HG + Sbjct: 244 SPQILKQHDVPVSKITQEAGEIM--------ITFPFGYHAGFNHGFN 282
>HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (Protein| hyperplastic discs) Length = 2885 Score = 27.7 bits (60), Expect = 7.1 Identities = 9/13 (69%), Positives = 10/13 (76%) Frame = -1 Query: 54 SPIWFSHQLPPWP 16 SPIW S +L PWP Sbjct: 344 SPIWISEELQPWP 356
>O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor OR12-9)| Length = 309 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGCY 335 S L++ + +F+ L+ + +GN ISF GC+ Sbjct: 65 SFLEISFTNIFIPRVLISITTGNKSISFAGCF 96
>ABCF1_RAT (Q6MG08) ATP-binding cassette sub-family F member 1 (ATP-binding| cassette 50) Length = 839 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 69 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194 KK+ QK++ L +++ + L ++K GG ++ K KEV Sbjct: 531 KKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEV 572
>CC28B_HUMAN (Q9BUN5) Coiled-coil domain-containing protein 28B| Length = 241 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = -1 Query: 66 PRSCSPIWFSHQLP 25 P SCSP+ FSH+LP Sbjct: 216 PTSCSPVRFSHRLP 229
>ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1| Length = 837 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/42 (30%), Positives = 24/42 (57%) Frame = +3 Query: 69 KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194 KK+ QK++ L +++ + L ++K GG ++ K KEV Sbjct: 529 KKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEV 570
>C71C1_MAIZE (Q43250) Cytochrome P450 71C1 (EC 1.14.-.-) (Benzoxazineless 4)| Length = 535 Score = 27.7 bits (60), Expect = 7.1 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -1 Query: 54 SPIWFSHQLPPWP*SKLP 1 SP W H+LPP P KLP Sbjct: 47 SPKWKQHRLPPTPPGKLP 64
>ZBI1_ZYGBI (O63264) Probable intron-encoded endonuclease I-ZbiI (EC 3.1.-.-)| Length = 239 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = -1 Query: 366 HICSKL-AWVFNNSHEKI*NSFLKTVVLTLALRTLEHRA 253 HIC K WV + H+K+ + L V+T +T +H A Sbjct: 71 HICLKFDEWVLSPPHKKMRINHLGNEVITWGAQTFKHEA 109
>OR4D5_HUMAN (Q8NGN0) Olfactory receptor 4D5 (Olfactory receptor OR11-276)| Length = 318 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/31 (48%), Positives = 16/31 (51%) Frame = +3 Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGC 332 S LD Y + LV L SGN ISF GC Sbjct: 67 SFLDFCYSSITAPRMLVDLLSGNPTISFGGC 97
>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3726 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/46 (26%), Positives = 22/46 (47%) Frame = -2 Query: 140 LSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 3 ++QH ++P+ C +LNNK + H++ LH + C Sbjct: 1253 MTQHSVQPLLRCPLCQDMLNNK-------IHLQLHLTHLHSVAPDC 1291
>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding| factor) (AT-binding transcription factor 1) Length = 3703 Score = 27.3 bits (59), Expect = 9.2 Identities = 12/46 (26%), Positives = 22/46 (47%) Frame = -2 Query: 140 LSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 3 ++QH ++P+ C +LNNK + H++ LH + C Sbjct: 1243 MTQHSVQPMLRCPLCQDMLNNK-------IHLQLHLTHLHSVAPDC 1281
>O13J1_HUMAN (Q8NGT2) Olfactory receptor 13J1| Length = 312 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/31 (45%), Positives = 16/31 (51%) Frame = +3 Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGC 332 S LD+ Y P F+ LV L S ISF C Sbjct: 67 STLDICYTPTFVPLMLVHLLSSRKTISFAVC 97
>FHAB_BORPE (P12255) Filamentous hemagglutinin| Length = 3590 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = -2 Query: 155 TTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLP 48 TTPL+ + V+V+QR +S +NN PG LP Sbjct: 3490 TTPLSGRHVVQQQVQVLQRQASDINNTKSLPGGKLP 3525 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,058,617 Number of Sequences: 219361 Number of extensions: 860988 Number of successful extensions: 2385 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2382 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)