ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8n24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RL14_PEA (P55844) Probable 60 ribosomal protein L14 (Hydroxyprol... 98 4e-21
2RL14_RAT (Q63507) 60S ribosomal protein L14 62 3e-10
3RL14_MOUSE (Q9CR57) 60S ribosomal protein L14 62 3e-10
4RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7) 61 6e-10
5RL14_GRIJA (Q7XYA7) 60S ribosomal protein L14 57 1e-08
6RL14_LUMRU (O46160) 60S ribosomal protein L14 54 1e-07
7RL14B_YEAST (P38754) 60S ribosomal protein L14-B 52 3e-07
8RL14A_YEAST (P36105) 60S ribosomal protein L14-A 52 4e-07
9RL14_SCHPO (O94238) 60S ribosomal protein L14 51 8e-07
10RL14_DROME (P55841) 60S ribosomal protein L14 49 3e-06
11RL14_DROVI (Q95ZE8) 60S ribosomal protein L14 45 6e-05
12JHD3B_DROME (Q9V6L0) Probable JmjC domain-containing histone dem... 30 1.9
13HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (P... 28 7.1
14O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor... 28 7.1
15ABCF1_RAT (Q6MG08) ATP-binding cassette sub-family F member 1 (A... 28 7.1
16CC28B_HUMAN (Q9BUN5) Coiled-coil domain-containing protein 28B 28 7.1
17ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1 28 7.1
18C71C1_MAIZE (Q43250) Cytochrome P450 71C1 (EC 1.14.-.-) (Benzoxa... 28 7.1
19ZBI1_ZYGBI (O63264) Probable intron-encoded endonuclease I-ZbiI ... 27 9.2
20OR4D5_HUMAN (Q8NGN0) Olfactory receptor 4D5 (Olfactory receptor ... 27 9.2
21ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein ... 27 9.2
22ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein ... 27 9.2
23O13J1_HUMAN (Q8NGT2) Olfactory receptor 13J1 27 9.2
24FHAB_BORPE (P12255) Filamentous hemagglutinin 27 9.2

>RL14_PEA (P55844) Probable 60 ribosomal protein L14 (Hydroxyproline-rich|
           glycoprotein HRGP1)
          Length = 133

 Score = 98.2 bits (243), Expect = 4e-21
 Identities = 47/63 (74%), Positives = 53/63 (84%)
 Frame = +3

Query: 9   LIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           LIKA+E ADVK KW  SSWG+KLIV+K RA+LNDFDRFK+MLAKIKR   +RQELAKLKK
Sbjct: 71  LIKALEAADVKNKWAKSSWGRKLIVKKTRAALNDFDRFKIMLAKIKRAAGVRQELAKLKK 130

Query: 189 EVA 197
             A
Sbjct: 131 TAA 133



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>RL14_RAT (Q63507) 60S ribosomal protein L14|
          Length = 213

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           KA E+AD+ TKW  + W KK+  ++R+A + DFDRFKVM AK  R   I+ E+ KL++
Sbjct: 74  KAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 131



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>RL14_MOUSE (Q9CR57) 60S ribosomal protein L14|
          Length = 216

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 28/58 (48%), Positives = 40/58 (68%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           KA E+AD+ TKW  + W KK+  ++R+A + DFDRFKVM AK  R   I+ E+ KL++
Sbjct: 74  KAWEKADINTKWAATRWAKKIDARERKAKMTDFDRFKVMKAKKMRNRIIKTEVKKLQR 131



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>RL14_HUMAN (P50914) 60S ribosomal protein L14 (CAG-ISL 7)|
          Length = 212

 Score = 61.2 bits (147), Expect = 6e-10
 Identities = 27/58 (46%), Positives = 40/58 (68%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           +A ++AD+ TKW  + W KK+  ++R+A + DFDRFKVM AK  R   I+ E+ KL+K
Sbjct: 74  QAWQKADINTKWAATRWAKKIEARERKAKMTDFDRFKVMKAKKMRNRIIKNEVKKLQK 131



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>RL14_GRIJA (Q7XYA7) 60S ribosomal protein L14|
          Length = 133

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 30  ADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLK 185
           A V   +  S WGKKL  +++RA+L+DF RFKVM+A++K+  AI  ELAKLK
Sbjct: 81  AKVDETFAASGWGKKLAKREKRAALDDFGRFKVMVARMKKSKAINAELAKLK 132



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>RL14_LUMRU (O46160) 60S ribosomal protein L14|
          Length = 152

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 25/58 (43%), Positives = 37/58 (63%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           KA E+ ++  KWE S   KK+  +++R +L DF+RFK+M AK  R   I+ E  KL+K
Sbjct: 75  KAWEKDEISKKWEESHLAKKIAAKEKRKTLTDFERFKLMKAKQARNRLIKIEFGKLRK 132



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>RL14B_YEAST (P38754) 60S ribosomal protein L14-B|
          Length = 138

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 25/59 (42%), Positives = 39/59 (66%)
 Frame = +3

Query: 3   ATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAK 179
           AT+ K    A V  KW  SSW KK+  ++RRA+L DF+RF+VM+ + ++   +++ LAK
Sbjct: 79  ATVSKKWAAAGVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137



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>RL14A_YEAST (P36105) 60S ribosomal protein L14-A|
          Length = 138

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 25/59 (42%), Positives = 39/59 (66%)
 Frame = +3

Query: 3   ATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAK 179
           AT+ K    A V  KW  SSW KK+  ++RRA+L DF+RF+VM+ + ++   +++ LAK
Sbjct: 79  ATVSKKWAAAAVCEKWAASSWAKKIAQRERRAALTDFERFQVMVLRKQKRYTVKKALAK 137



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>RL14_SCHPO (O94238) 60S ribosomal protein L14|
          Length = 134

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKK 188
           K  +  DV  KW +S+W KKL  +K R+ LNDFDRF VM  K +R   +   +AK  K
Sbjct: 76  KKWKAQDVCNKWASSAWAKKLEAKKVRSQLNDFDRFAVMRLKKQRREQVNVAVAKALK 133



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>RL14_DROME (P55841) 60S ribosomal protein L14|
          Length = 166

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 27/65 (41%), Positives = 36/65 (55%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194
           KA  E+D+K +W+ S W  K     +R+SLNDFDRFK+  AK +R   +      LKK  
Sbjct: 75  KAWTESDLKAQWKVSPWSVKAQNICKRSSLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRT 134

Query: 195 AA*NT 209
            A  T
Sbjct: 135 KADGT 139



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>RL14_DROVI (Q95ZE8) 60S ribosomal protein L14|
          Length = 160

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 24/65 (36%), Positives = 35/65 (53%)
 Frame = +3

Query: 15  KAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194
           KA  ++D+K +W+ S W  K     +R+ LNDFDRFK+  AK +R   +      LKK  
Sbjct: 75  KAWVDSDLKAQWKVSPWSVKAQNICKRSQLNDFDRFKLRYAKRQRNKLLTIAFNTLKKRT 134

Query: 195 AA*NT 209
            +  T
Sbjct: 135 KSDGT 139



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>JHD3B_DROME (Q9V6L0) Probable JmjC domain-containing histone demethylation|
           protein 3B (EC 1.14.11.-)
          Length = 452

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/47 (29%), Positives = 21/47 (44%)
 Frame = -2

Query: 152 TPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLD 12
           +P  L QHD+   K+ Q    ++           PFG+H  F HG +
Sbjct: 244 SPQILKQHDVPVSKITQEAGEIM--------ITFPFGYHAGFNHGFN 282



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>HYD_DROME (P51592) Ubiquitin--protein ligase hyd (EC 6.3.2.-) (Protein|
           hyperplastic discs)
          Length = 2885

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -1

Query: 54  SPIWFSHQLPPWP 16
           SPIW S +L PWP
Sbjct: 344 SPIWISEELQPWP 356



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>O2AP1_HUMAN (Q8NGE2) Olfactory receptor 2AP1 (Olfactory receptor OR12-9)|
          Length = 309

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +3

Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGCY 335
           S L++ +  +F+   L+ + +GN  ISF GC+
Sbjct: 65  SFLEISFTNIFIPRVLISITTGNKSISFAGCF 96



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>ABCF1_RAT (Q6MG08) ATP-binding cassette sub-family F member 1 (ATP-binding|
           cassette 50)
          Length = 839

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 69  KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194
           KK+  QK++  L  +++ +  L ++K GG   ++  K  KEV
Sbjct: 531 KKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEV 572



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>CC28B_HUMAN (Q9BUN5) Coiled-coil domain-containing protein 28B|
          Length = 241

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -1

Query: 66  PRSCSPIWFSHQLP 25
           P SCSP+ FSH+LP
Sbjct: 216 PTSCSPVRFSHRLP 229



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>ABCF1_MOUSE (Q6P542) ATP-binding cassette sub-family F member 1|
          Length = 837

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/42 (30%), Positives = 24/42 (57%)
 Frame = +3

Query: 69  KKLIVQKRRASLNDFDRFKVMLAKIKRGGAIRQELAKLKKEV 194
           KK+  QK++  L  +++ +  L ++K GG   ++  K  KEV
Sbjct: 529 KKMYQQKQKELLKQYEKQEKKLKELKAGGKSTKQAEKQTKEV 570



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>C71C1_MAIZE (Q43250) Cytochrome P450 71C1 (EC 1.14.-.-) (Benzoxazineless 4)|
          Length = 535

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = -1

Query: 54  SPIWFSHQLPPWP*SKLP 1
           SP W  H+LPP P  KLP
Sbjct: 47  SPKWKQHRLPPTPPGKLP 64



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>ZBI1_ZYGBI (O63264) Probable intron-encoded endonuclease I-ZbiI (EC 3.1.-.-)|
          Length = 239

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = -1

Query: 366 HICSKL-AWVFNNSHEKI*NSFLKTVVLTLALRTLEHRA 253
           HIC K   WV +  H+K+  + L   V+T   +T +H A
Sbjct: 71  HICLKFDEWVLSPPHKKMRINHLGNEVITWGAQTFKHEA 109



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>OR4D5_HUMAN (Q8NGN0) Olfactory receptor 4D5 (Olfactory receptor OR11-276)|
          Length = 318

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGC 332
           S LD  Y  +     LV L SGN  ISF GC
Sbjct: 67  SFLDFCYSSITAPRMLVDLLSGNPTISFGGC 97



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>ATBF1_MOUSE (Q61329) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3726

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -2

Query: 140  LSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 3
            ++QH ++P+     C  +LNNK       +    H++ LH +   C
Sbjct: 1253 MTQHSVQPLLRCPLCQDMLNNK-------IHLQLHLTHLHSVAPDC 1291



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>ATBF1_HUMAN (Q15911) Alpha-fetoprotein enhancer-binding protein (AT motif-binding|
            factor) (AT-binding transcription factor 1)
          Length = 3703

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = -2

Query: 140  LSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQSC 3
            ++QH ++P+     C  +LNNK       +    H++ LH +   C
Sbjct: 1243 MTQHSVQPMLRCPLCQDMLNNK-------IHLQLHLTHLHSVAPDC 1281



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>O13J1_HUMAN (Q8NGT2) Olfactory receptor 13J1|
          Length = 312

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 240 SKLDLLYVPVFLKPELVQLFSGNYFISFHGC 332
           S LD+ Y P F+   LV L S    ISF  C
Sbjct: 67  STLDICYTPTFVPLMLVHLLSSRKTISFAVC 97



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>FHAB_BORPE (P12255) Filamentous hemagglutinin|
          Length = 3590

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -2

Query: 155  TTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLP 48
            TTPL+      + V+V+QR +S +NN    PG  LP
Sbjct: 3490 TTPLSGRHVVQQQVQVLQRQASDINNTKSLPGGKLP 3525


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,058,617
Number of Sequences: 219361
Number of extensions: 860988
Number of successful extensions: 2385
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2382
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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