>SAHH_METKA (P58855) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 424

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 172 DTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHP 282
           +T   YY N D +L H  D I+    D I R +TE P
Sbjct: 107 ETEEEYYQNIDRVLSHEPDIIVDDGADCIARVHTEFP 143

>PFTA_RAT (Q04631) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransfer
          Length = 377

 Score = 31.2 bits (69), Expect = 1.9
 Identities = 21/89 (23%), Positives = 38/89 (42%)
 Frame = +1

Query: 142 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 321
           + R  LQ D  +   +    DAI  +  +  +WH+   +LR            S  K  +
Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149

Query: 322 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 408
             +++I+ ++EE P+ Y       W HR+
Sbjct: 150 EEMNYIIAIIEEQPKNYQV-----WHHRR 173

>GLND_AZOVI (P36223) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 899

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = +1

Query: 145 VRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRH 267
           VR    PD   +L      D  LRH +  I WH T+AIL+H
Sbjct: 644 VRSGTDPDDAEHLWTQLGDDYFLRHTSSDIAWH-TEAILQH 683

>PFTA_MOUSE (Q61239) Protein farnesyltransferase/geranylgeranyltransferase type|
           I alpha subunit (EC 2.5.1.58) (EC 2.5.1.59) (CAAX
           farnesyltransferase alpha subunit) (Ras proteins
           prenyltransferase alpha) (FTase-alpha) (Type I protein
           geranyl-geranyltransf
          Length = 377

 Score = 30.0 bits (66), Expect = 4.3
 Identities = 21/89 (23%), Positives = 37/89 (41%)
 Frame = +1

Query: 142 WVRRRLQPDTDTNLRYYTNADAILRHYTDAILWHYTDAILRHYTEHPKYTFP*SPCKSKE 321
           + R  LQ D  +   +    DAI  +  +  +WH+   +LR            S  K  +
Sbjct: 102 YFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLR------------SLQKDLQ 149

Query: 322 AWIHWILRLLEESPRRYNCSYWVPWQHRQ 408
             +++I  ++EE P+ Y       W HR+
Sbjct: 150 EEMNYITAIIEEQPKNYQV-----WHHRR 173

>ACDB1_METJA (Q57616) Acetyl-CoA decarbonylase/synthase complex beta subunit 1|
           (EC 2.3.1.-) (ACDS complex beta subunit 1) (ACDS complex
           acyltransferase 1)
          Length = 748

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 344 DFWKNHPDAIIAAIGSLGNIGKTFGAACSMIG 439
           D+ KN   A++ A+G L NI    GA C   G
Sbjct: 224 DYLKNRVPAVVVALGELDNITLAAGAGCIKAG 255

>NOTC2_RAT (Q9QW30) Neurogenic locus notch homolog protein 2 precursor (Notch|
           2) [Contains: Notch 2 extracellular truncation; Notch 2
           intracellular domain]
          Length = 2471

 Score = 29.3 bits (64), Expect = 7.4
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = -1

Query: 541 NGVEVCSCPLAYQGANTISSSV*ECIM 461
           NG  +C+CP AY+GA+  +  V EC M
Sbjct: 396 NGQYICTCPQAYKGAD-CTEDVDECAM 421

>EFNA1_RAT (P97553) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
 Frame = +1

Query: 100 FFYAPLWGLTNSLAWVRRRLQPDTDTNLRY----YTNADAILRHYTDAILWHY-----TD 252
           F +APL GL  SLA   R +     +N ++    YT     L  Y D I  HY      D
Sbjct: 3   FLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYT-VHVQLNDYLDIICPHYEDDSVAD 61

Query: 253 AILRHYT----EHPKYTFP*SPCKSKEAW 327
           A +  YT    EH +Y       K +  W
Sbjct: 62  AAMERYTLYMVEHQEYVTCEPQSKDQVRW 90

>EFNA1_MOUSE (P52793) Ephrin-A1 precursor (EPH-related receptor tyrosine kinase|
           ligand 1) (LERK-1) (Immediate early response protein
           B61)
          Length = 205

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
 Frame = +1

Query: 100 FFYAPLWGLTNSLAWVRRRLQPDTDTNLRY----YTNADAILRHYTDAILWHY-----TD 252
           F +APL GL  SLA   R +     +N ++    YT     L  Y D I  HY      D
Sbjct: 3   FLWAPLLGLCCSLAAADRHIVFWNSSNPKFREEDYT-VHVQLNDYLDIICPHYEDDSVAD 61

Query: 253 AILRHYT----EHPKYTFP*SPCKSKEAW 327
           A +  YT    EH +Y       K +  W
Sbjct: 62  AAMERYTLYMVEHQEYVACQPQSKDQVRW 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,744,662
Number of Sequences: 219361
Number of extensions: 1222810
Number of successful extensions: 3717
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3717
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4258037034
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)