ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8n21
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full... 615 e-173
2ref|XM_464784.1| Oryza sativa (japonica cultivar-group), mRNA 216 6e-53
3gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- a... 192 8e-46
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
5dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic D... 161 3e-36
6dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clon... 117 4e-23
7gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, compl... 46 0.12
8gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, comp... 46 0.12
9gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, comple... 46 0.12
10gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5,... 46 0.12
11gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, comp... 42 1.9
12gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly... 42 1.9
13gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete s... 42 1.9
14gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome... 42 1.9
15gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold 42 1.9
16gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, co... 40 7.3
17gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydroge... 40 7.3
18gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete s... 40 7.3
19emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, c... 40 7.3
20gb|AC093066.2| Homo sapiens chromosome 19 clone LLNLR-237C1, com... 40 7.3
21gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, comple... 40 7.3
22gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) g... 40 7.3
23gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome 40 7.3
24emb|AJ342722.1|HSA342722 Homo sapiens genomic sequence surroundi... 40 7.3

>gb|BT009646.1| Triticum aestivum clone wrsu1.pk0006.a3:fis, full insert mRNA
           sequence
          Length = 936

 Score =  615 bits (310), Expect = e-173
 Identities = 334/342 (97%)
 Strand = Plus / Minus

                                                                       
Query: 200 ccgacgccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatct 259
           ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 660 ccgacgccaacttacggcactacaccgacgccatcttacggcactacaccgacgccatct 601

                                                                       
Query: 260 tacggcactacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaag 319
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 600 tacggcactacaccgagcaccccaagtacaccttcccatgatgtccctgcaagtccaaag 541

                                                                       
Query: 320 aagcatggattcattggatcctgcgacttctggaagaatcacccagacgctataattgca 379
           |||||||| ||||||||||||||||||| |||||||||||||||||| |||||| |||||
Sbjct: 540 aagcatgggttcattggatcctgcgactactggaagaatcacccagatgctatagttgca 481

                                                                       
Query: 380 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 gctattgggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggt 421

                                                                       
Query: 440 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggc 361

                                                     
Query: 500 gccctgatacgcgagggggcagctgcatacctcaactccatt 541
           ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 360 gccctgatacgtgagggggcagctgcatacctcaactccatt 319



 Score =  242 bits (122), Expect = 1e-60
 Identities = 154/165 (93%), Gaps = 6/165 (3%)
 Strand = Plus / Minus

                                                                       
Query: 111 cccactatgggggctcaccaactccctcgcatgggtcaggaggaggctacaacccgacac 170
           |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 767 cccactatgggggctcaccaactcccacgcatgggtcaggaggaggctacaatccgacac 708

                                                                       
Query: 171 cgacaccaacttacggtactacaccaacgccgacgccatcttacggcactacaccgacgc 230
           |||||||||||||||| ||||||      |||||||||||||||||||||||||||||||
Sbjct: 707 cgacaccaacttacggcactaca------ccgacgccatcttacggcactacaccgacgc 654

                                                        
Query: 231 catcttatggcactacaccgacgccatcttacggcactacaccga 275
           || |||| |||||||||||||||||||||||||||||||||||||
Sbjct: 653 caacttacggcactacaccgacgccatcttacggcactacaccga 609



 Score =  157 bits (79), Expect = 5e-35
 Identities = 90/94 (95%)
 Strand = Plus / Minus

                                                                       
Query: 1   gggtggcaaggttcttctgntgagtgctgtcttggtggggcttgtttcactgagctcctg 60
           ||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||| ||
Sbjct: 859 gggtggcaaggttcttctgatcagtgccgtcttggtggggcttgtttcactgagctcgtg 800

                                             
Query: 61  caggagcctgggagagttgcatgagcagaagacc 94
           ||||||||||||||||||||||||||||||||||
Sbjct: 799 caggagcctgggagagttgcatgagcagaagacc 766



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>ref|XM_464784.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 660

 Score =  216 bits (109), Expect = 6e-53
 Identities = 279/336 (83%), Gaps = 6/336 (1%)
 Strand = Plus / Plus

                                                                       
Query: 206 ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 265
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 205 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 264

                                                                       
Query: 266 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 325
           || ||||| |||||||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 265 acgacaccaagcacccccagcacacc------tgatgtccctgaagttccgacaaagcat 318

                                                                       
Query: 326 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 385
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 319 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 378

                                                                       
Query: 386 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 445
           |||||||||||| |||| ||||||||| | ||| |||| |||||| ||||   |||||||
Sbjct: 379 gggtcccttggcgacattggcaagacactcggtactgcttgcagtttgatcactggcaag 438

                                                                       
Query: 446 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 505
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 439 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 498

                                               
Query: 506 atacgcgagggggcagctgcatacctcaactccatt 541
            | |||||||| ||||||||||||||||||||||||
Sbjct: 499 ctccgcgagggagcagctgcatacctcaactccatt 534



 Score =  111 bits (56), Expect = 2e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcaaggttcttctgntgagtgctgtcttggtggggcttgtttcactgagctcctgcagga 65
           |||||||||||||| | |||| |||| ||||||||||  |||| |||||||| |||||||
Sbjct: 8   gcaaggttcttctgatcagtggtgtcctggtggggctcctttctctgagctcatgcagga 67

                                                      
Query: 66  gcctgggagagttgcatgagcagaagacctactcttcttctac 108
           ||||||||||||||  ||| |||||||||||||||||| ||||
Sbjct: 68  gcctgggagagttgtctgaacagaagacctactcttctactac 110



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 191 acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 250
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 166 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 225

                                  
Query: 251 acgccatcttacggcactacacc 273
           || ||||||||||||||||||||
Sbjct: 226 acaccatcttacggcactacacc 248



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 167 acaccgacaccaacttacggtactacaccaac 198
           ||||| |||||| ||||||| |||||||||||
Sbjct: 220 acaccaacaccatcttacggcactacaccaac 251



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>gb|AY568677.1| Oryza sativa (japonica cultivar-group) proline- and threonine-rich
           protein mRNA, complete cds
          Length = 902

 Score =  192 bits (97), Expect = 8e-46
 Identities = 276/336 (82%), Gaps = 6/336 (1%)
 Strand = Plus / Plus

                                                                       
Query: 206 ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 265
           |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 269 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 328

                                                                       
Query: 266 actacaccgagcaccccaagtacaccttcccatgaagtccctgcaagtccaaagaagcat 325
           || ||||| ||| |||| || |||||      ||| ||||||| |  ||| |  ||||||
Sbjct: 329 acgacaccaagctcccccagcacacc------tgatgtccctgaagttccgacaaagcat 382

                                                                       
Query: 326 ggattcattggatcctgcgacttctggaagaatcacccagacgctataattgcagctatt 385
           |  |||  |||||||||||| | ||||||||| || ||||| | ||| ||  ||||||||
Sbjct: 383 gatttctgtggatcctgcgattactggaagaaccatccagatgttatcatctcagctatt 442

                                                                       
Query: 386 gggtcccttggcaacatcggcaagacatttggtgctgcatgcagtatgataggtggcaag 445
           |||||||||||| |||| |||| |||| | | | |||| |||||| ||||   |||||||
Sbjct: 443 gggtcccttggcgacattggcatgacactcgatactgcttgcagtttgatcactggcaag 502

                                                                       
Query: 446 aagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattggcgccctg 505
           ||||||| |||| | ||||||||||| ||||||||| |||||||||||| ||| || |||
Sbjct: 503 aagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactggtgctctg 562

                                               
Query: 506 atacgcgagggggcagctgcatacctcaactccatt 541
            | |||||||| ||||||||||||||||||||||||
Sbjct: 563 ctccgcgagggagcagctgcatacctcaactccatt 598



 Score =  111 bits (56), Expect = 2e-21
 Identities = 91/103 (88%)
 Strand = Plus / Plus

                                                                       
Query: 6   gcaaggttcttctgntgagtgctgtcttggtggggcttgtttcactgagctcctgcagga 65
           |||||||||||||| | |||| |||| ||||||||||  |||| |||||||| |||||||
Sbjct: 72  gcaaggttcttctgatcagtggtgtcctggtggggctcctttctctgagctcatgcagga 131

                                                      
Query: 66  gcctgggagagttgcatgagcagaagacctactcttcttctac 108
           ||||||||||||||  ||| |||||||||||||||||| ||||
Sbjct: 132 gcctgggagagttgtctgaacagaagacctactcttctactac 174



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                       
Query: 191 acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 250
           |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 230 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 289

                                  
Query: 251 acgccatcttacggcactacacc 273
           || ||||||||||||||||||||
Sbjct: 290 acaccatcttacggcactacacc 312



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 167 acaccgacaccaacttacggtactacaccaac 198
           ||||| |||||| ||||||| |||||||||||
Sbjct: 284 acaccaacaccatcttacggcactacaccaac 315



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  161 bits (81), Expect = 3e-36
 Identities = 165/193 (85%)
 Strand = Plus / Minus

                                                                           
Query: 349     ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 408
               ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 7323474 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 7323415

                                                                           
Query: 409     gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 468
               |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 7323414 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 7323355

                                                                           
Query: 469     actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 528
               ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 7323354 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 7323295

                            
Query: 529     cctcaactccatt 541
               |||||||||||||
Sbjct: 7323294 cctcaactccatt 7323282



 Score =  111 bits (56), Expect = 2e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                           
Query: 6       gcaaggttcttctgntgagtgctgtcttggtggggcttgtttcactgagctcctgcagga 65
               |||||||||||||| | |||| |||| ||||||||||  |||| |||||||| |||||||
Sbjct: 7324201 gcaaggttcttctgatcagtggtgtcctggtggggctcctttctctgagctcatgcagga 7324142

                                                          
Query: 66      gcctgggagagttgcatgagcagaagacctactcttcttctac 108
               ||||||||||||||  ||| |||||||||||||||||| ||||
Sbjct: 7324141 gcctgggagagttgtctgaacagaagacctactcttctactac 7324099



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 191     acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 250
               |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 7323735 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 7323676

                                      
Query: 251     acgccatcttacggcactacacc 273
               || ||||||||||||||||||||
Sbjct: 7323675 acaccatcttacggcactacacc 7323653



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 206     ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 265
               |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 7323696 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 7323637

                                          
Query: 266     actacaccgagcaccccaagtacacct 292
               || ||||| |||||||| || ||||||
Sbjct: 7323636 acgacaccaagcacccccagcacacct 7323610



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 167     acaccgacaccaacttacggtactacaccaac 198
               ||||| |||||| ||||||| |||||||||||
Sbjct: 7323681 acaccaacaccatcttacggcactacaccaac 7323650



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>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  161 bits (81), Expect = 3e-36
 Identities = 165/193 (85%)
 Strand = Plus / Minus

                                                                         
Query: 349   ctggaagaatcacccagacgctataattgcagctattgggtcccttggcaacatcggcaa 408
             ||||||||| || ||||| | ||| ||  |||||||||||||||||||| |||| |||||
Sbjct: 99282 ctggaagaaccatccagatgttatcatctcagctattgggtcccttggcgacattggcaa 99223

                                                                         
Query: 409   gacatttggtgctgcatgcagtatgataggtggcaagaagctaggaaatatgcatgatgc 468
             |||| | ||| |||| |||||| ||||   |||||||||||||| |||| | ||||||||
Sbjct: 99222 gacactcggtactgcttgcagtttgatcactggcaagaagctagaaaatcttcatgatgc 99163

                                                                         
Query: 469   actctcaaacactagaactgatggtattggcgccctgatacgcgagggggcagctgcata 528
             ||| ||||||||| |||||||||||| ||| || ||| | |||||||| |||||||||||
Sbjct: 99162 actttcaaacactggaactgatggtactggtgctctgctccgcgagggagcagctgcata 99103

                          
Query: 529   cctcaactccatt 541
             |||||||||||||
Sbjct: 99102 cctcaactccatt 99090



 Score =  111 bits (56), Expect = 2e-21
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 6      gcaaggttcttctgntgagtgctgtcttggtggggcttgtttcactgagctcctgcagga 65
              |||||||||||||| | |||| |||| ||||||||||  |||| |||||||| |||||||
Sbjct: 100009 gcaaggttcttctgatcagtggtgtcctggtggggctcctttctctgagctcatgcagga 99950

                                                         
Query: 66     gcctgggagagttgcatgagcagaagacctactcttcttctac 108
              ||||||||||||||  ||| |||||||||||||||||| ||||
Sbjct: 99949  gcctgggagagttgtctgaacagaagacctactcttctactac 99907



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 191   acaccaacgccgacgccatcttacggcactacaccgacgccatcttatggcactacaccg 250
             |||||||| || || ||| |||||||| ||||||| || |||||||||||||||||||| 
Sbjct: 99543 acaccaaccccaacaccagcttacggctctacaccaacaccatcttatggcactacacca 99484

                                    
Query: 251   acgccatcttacggcactacacc 273
             || ||||||||||||||||||||
Sbjct: 99483 acaccatcttacggcactacacc 99461



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 206   ccatcttacggcactacaccgacgccatcttatggcactacaccgacgccatcttacggc 265
             |||||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||||
Sbjct: 99504 ccatcttatggcactacaccaacaccatcttacggcactacaccaacaccatcttacggc 99445

                                        
Query: 266   actacaccgagcaccccaagtacacct 292
             || ||||| |||||||| || ||||||
Sbjct: 99444 acgacaccaagcacccccagcacacct 99418



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 167   acaccgacaccaacttacggtactacaccaac 198
             ||||| |||||| ||||||| |||||||||||
Sbjct: 99489 acaccaacaccatcttacggcactacaccaac 99458



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>dbj|AK058752.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-H10, full
           insert sequence
          Length = 377

 Score =  117 bits (59), Expect = 4e-23
 Identities = 92/103 (89%)
 Strand = Plus / Plus

                                                                       
Query: 439 tggcaagaagctaggaaatatgcatgatgcactctcaaacactagaactgatggtattgg 498
           |||||||||||||| |||| | ||||||||||| ||||||||| |||||||||||| |||
Sbjct: 9   tggcaagaagctagaaaatcttcatgatgcactttcaaacactggaactgatggtactgg 68

                                                      
Query: 499 cgccctgatacgcgagggggcagctgcatacctcaactccatt 541
            || ||| | |||||||| ||||||||||||||||||||||||
Sbjct: 69  tgctctgctccgcgagggagcagctgcatacctcaactccatt 111



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>gb|AC010242.7| Homo sapiens chromosome 5 clone CTC-359E10, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 313   tccaaagaagcatggattcattg 335
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046



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>gb|AC008816.8| Homo sapiens chromosome 5 clone CTD-2122K17, complete sequence
          Length = 174293

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 313   tccaaagaagcatggattcattg 335
             |||||||||||||||||||||||
Sbjct: 29024 tccaaagaagcatggattcattg 29046



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>gb|AC010280.7| Homo sapiens chromosome 5 clone CTC-537E7, complete sequence
          Length = 133790

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 313   tccaaagaagcatggattcattg 335
             |||||||||||||||||||||||
Sbjct: 43691 tccaaagaagcatggattcattg 43669



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>gb|AC017093.3|AC017093 Homo sapiens BAC clone RP11-511G7 from 5, complete sequence
          Length = 203043

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 313   tccaaagaagcatggattcattg 335
             |||||||||||||||||||||||
Sbjct: 91385 tccaaagaagcatggattcattg 91407



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>gb|AC118627.6| Mus musculus chromosome 15, clone RP24-91E8, complete sequence
          Length = 256158

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 289    accttcccatgaagtccctgc 309
              |||||||||||||||||||||
Sbjct: 115173 accttcccatgaagtccctgc 115193



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>gb|AY582740.1| Chlamydomonas reinhardtii Fe-hydrogenase assembly protein (HydG)
           mRNA, complete cds
          Length = 1704

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 273 cgagcaccccaagtacacctt 293
           |||||||||||||||||||||
Sbjct: 675 cgagcaccccaagtacacctt 695



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>gb|AC129886.3| Atelerix albiventris clone LB4-234A16, complete sequence
          Length = 176448

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 464   gatgcactctcaaacactagaactg 488
             ||||||||||||||| |||||||||
Sbjct: 18448 gatgcactctcaaactctagaactg 18472



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 464   gatgcactctcaaacactagaactg 488
             ||||||||||||||| |||||||||
Sbjct: 17278 gatgcactctcaaactctagaactg 17254



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>gb|AC159301.2| Mus musculus BAC clone RP23-213B1 from chromosome 13, complete sequence
          Length = 188633

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 445    gaagctaggaaatatgcatga 465
              |||||||||||||||||||||
Sbjct: 108440 gaagctaggaaatatgcatga 108420



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>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold
          Length = 2136267

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 464    gatgcactctcaaacactagaactg 488
              ||||||||||||||| |||||||||
Sbjct: 627720 gatgcactctcaaactctagaactg 627744



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 464    gatgcactctcaaacactagaactg 488
              ||||||||||||||| |||||||||
Sbjct: 626550 gatgcactctcaaactctagaactg 626526



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>gb|AC011558.6| Homo sapiens chromosome 19 clone LLNLR-291F12, complete sequence
          Length = 43128

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 55    ctcctgcaggagcctgggag 74
             ||||||||||||||||||||
Sbjct: 42852 ctcctgcaggagcctgggag 42833



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>gb|AY113188.1| Mastigamoeba balamuthi aldehyde-alcohol dehydrogenase E (aadhE1)
            gene, partial cds
          Length = 3207

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 508  acgcgagggggcagctgcat 527
            ||||||||||||||||||||
Sbjct: 1738 acgcgagggggcagctgcat 1719



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>gb|AC148763.14| Medicago truncatula clone mth2-29o24, complete sequence
          Length = 104879

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 161   aacccgacaccgacaccaac 180
             ||||||||||||||||||||
Sbjct: 15886 aacccgacaccgacaccaac 15867



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>emb|BX470154.5| Zebrafish DNA sequence from clone CH211-81N22, complete sequence
          Length = 158249

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    tggtgctgcatgcagtatga 434
              ||||||||||||||||||||
Sbjct: 114553 tggtgctgcatgcagtatga 114572



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>gb|AC093066.2| Homo sapiens chromosome 19 clone LLNLR-237C1, complete sequence
          Length = 5054

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   ctcctgcaggagcctgggag 74
            ||||||||||||||||||||
Sbjct: 1337 ctcctgcaggagcctgggag 1318



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>gb|AC093597.3| Homo sapiens BAC clone RP11-187O17 from 4, complete sequence
          Length = 17211

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   accttcccatgaagtccctg 308
             ||||||||||||||||||||
Sbjct: 10846 accttcccatgaagtccctg 10827



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>gb|AF142686.1| Cyclolobium nutans maturase-like protein (matK) gene, complete cds;
           chloroplast gene for chloroplast product
          Length = 2503

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 315 caaagaagcatggattcattggat 338
           |||||||||| |||||||||||||
Sbjct: 701 caaagaagcagggattcattggat 678



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>gb|AE008384.1| Methanosarcina mazei strain Goe1, complete genome
          Length = 4096345

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 317     aagaagcatggattcattgg 336
               ||||||||||||||||||||
Sbjct: 2827466 aagaagcatggattcattgg 2827485



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>emb|AJ342722.1|HSA342722 Homo sapiens genomic sequence surrounding NotI site, clone NR1-JG2R
          Length = 788

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 55  ctcctgcaggagcctgggag 74
           ||||||||||||||||||||
Sbjct: 467 ctcctgcaggagcctgggag 448


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,679,586
Number of Sequences: 3902068
Number of extensions: 3679586
Number of successful extensions: 62887
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62785
Number of HSP's gapped (non-prelim): 87
length of query: 541
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 518
effective length of database: 17,143,297,704
effective search space: 8880228210672
effective search space used: 8880228210672
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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