ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8n20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CALX_HELTU (Q39994) Calnexin homolog precursor 49 3e-06
2CALX_SOYBN (Q39817) Calnexin homolog precursor 49 3e-06
3CALX2_ARATH (Q38798) Calnexin homolog 2 precursor 48 9e-06
4CALX1_ARATH (P29402) Calnexin homolog 1 precursor 45 6e-05
5CALX_PEA (O82709) Calnexin homolog precursor 39 0.005

>CALX_HELTU (Q39994) Calnexin homolog precursor|
          Length = 540

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 19/26 (73%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   YLKYIRPQEAGWDAKEFDNDTPYTIM 78
           YLKY+RPQ+AGW AK FDN++PY+IM
Sbjct: 116 YLKYLRPQDAGWTAKGFDNESPYSIM 141



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>CALX_SOYBN (Q39817) Calnexin homolog precursor|
          Length = 546

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 18/26 (69%), Positives = 24/26 (92%)
 Frame = +1

Query: 1   YLKYIRPQEAGWDAKEFDNDTPYTIM 78
           Y+KY+RPQE+GW  KEFDN++PY+IM
Sbjct: 121 YIKYLRPQESGWKPKEFDNESPYSIM 146



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>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor|
          Length = 532

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 19/26 (73%), Positives = 23/26 (88%)
 Frame = +1

Query: 1   YLKYIRPQEAGWDAKEFDNDTPYTIM 78
           YLKY+RPQEAGW  + FDND+PY+IM
Sbjct: 114 YLKYLRPQEAGWVPQGFDNDSPYSIM 139



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>CALX1_ARATH (P29402) Calnexin homolog 1 precursor|
          Length = 530

 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 17/26 (65%), Positives = 23/26 (88%)
 Frame = +1

Query: 1   YLKYIRPQEAGWDAKEFDNDTPYTIM 78
           YLKY+RPQEAGW  + FD+++PY+IM
Sbjct: 112 YLKYLRPQEAGWTPQGFDSESPYSIM 137



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>CALX_PEA (O82709) Calnexin homolog precursor|
          Length = 551

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 14/26 (53%), Positives = 21/26 (80%)
 Frame = +1

Query: 1   YLKYIRPQEAGWDAKEFDNDTPYTIM 78
           Y+KY++ QE+GW  K FDN++ Y+IM
Sbjct: 122 YIKYLQTQESGWKPKGFDNESGYSIM 147


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,992,457
Number of Sequences: 219361
Number of extensions: 87050
Number of successful extensions: 357
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 80,573,946
effective HSP length: 1
effective length of database: 80,354,585
effective search space used: 1928510040
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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