Clone Name | bags8n20 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CALX_HELTU (Q39994) Calnexin homolog precursor | 49 | 3e-06 | 2 | CALX_SOYBN (Q39817) Calnexin homolog precursor | 49 | 3e-06 | 3 | CALX2_ARATH (Q38798) Calnexin homolog 2 precursor | 48 | 9e-06 | 4 | CALX1_ARATH (P29402) Calnexin homolog 1 precursor | 45 | 6e-05 | 5 | CALX_PEA (O82709) Calnexin homolog precursor | 39 | 0.005 |
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>CALX_HELTU (Q39994) Calnexin homolog precursor| Length = 540 Score = 49.3 bits (116), Expect = 3e-06 Identities = 19/26 (73%), Positives = 24/26 (92%) Frame = +1 Query: 1 YLKYIRPQEAGWDAKEFDNDTPYTIM 78 YLKY+RPQ+AGW AK FDN++PY+IM Sbjct: 116 YLKYLRPQDAGWTAKGFDNESPYSIM 141
>CALX_SOYBN (Q39817) Calnexin homolog precursor| Length = 546 Score = 49.3 bits (116), Expect = 3e-06 Identities = 18/26 (69%), Positives = 24/26 (92%) Frame = +1 Query: 1 YLKYIRPQEAGWDAKEFDNDTPYTIM 78 Y+KY+RPQE+GW KEFDN++PY+IM Sbjct: 121 YIKYLRPQESGWKPKEFDNESPYSIM 146
>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor| Length = 532 Score = 47.8 bits (112), Expect = 9e-06 Identities = 19/26 (73%), Positives = 23/26 (88%) Frame = +1 Query: 1 YLKYIRPQEAGWDAKEFDNDTPYTIM 78 YLKY+RPQEAGW + FDND+PY+IM Sbjct: 114 YLKYLRPQEAGWVPQGFDNDSPYSIM 139
>CALX1_ARATH (P29402) Calnexin homolog 1 precursor| Length = 530 Score = 45.1 bits (105), Expect = 6e-05 Identities = 17/26 (65%), Positives = 23/26 (88%) Frame = +1 Query: 1 YLKYIRPQEAGWDAKEFDNDTPYTIM 78 YLKY+RPQEAGW + FD+++PY+IM Sbjct: 112 YLKYLRPQEAGWTPQGFDSESPYSIM 137
>CALX_PEA (O82709) Calnexin homolog precursor| Length = 551 Score = 38.5 bits (88), Expect = 0.005 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = +1 Query: 1 YLKYIRPQEAGWDAKEFDNDTPYTIM 78 Y+KY++ QE+GW K FDN++ Y+IM Sbjct: 122 YIKYLQTQESGWKPKGFDNESGYSIM 147 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,992,457 Number of Sequences: 219361 Number of extensions: 87050 Number of successful extensions: 357 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 353 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 357 length of database: 80,573,946 effective HSP length: 1 effective length of database: 80,354,585 effective search space used: 1928510040 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)