ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags8n18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067387.1| Oryza sativa (japonica cultivar-group) cDNA clon... 569 e-159
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 129 1e-26
3gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome... 129 1e-26
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
5gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare str... 129 1e-26
6ref|NM_129471.2| Arabidopsis thaliana RNA binding / pseudouridin... 82 2e-12
7emb|BX842445.1|CNS0A8U5 Arabidopsis thaliana Full-length cDNA Co... 82 2e-12
8gb|AY088622.1| Arabidopsis thaliana clone 853 mRNA, complete seq... 82 2e-12
9dbj|AK117682.1| Arabidopsis thaliana At2g39140 mRNA for unknown ... 82 2e-12
10gb|AC004697.3| Arabidopsis thaliana chromosome 2 clone T16B24 ma... 80 9e-12
11dbj|D10672.1|RICSINE1R3 Oryza sativa (japonica cultivar-group) p... 80 9e-12
12emb|CR936503.1| Lactobacillus sakei strain 23K complete genome 46 0.13
13gb|BT013987.1| Lycopersicon esculentum clone 133032R, mRNA sequence 42 2.1
14emb|AL451163.8| Human DNA sequence from clone RP11-438G15 on chr... 42 2.1
15ref|XM_690805.1| PREDICTED: Danio rerio similar to Nesprin 1 (Nu... 42 2.1
16emb|BX511113.8| Zebrafish DNA sequence from clone DKEY-38J10 in ... 42 2.1
17gb|AY662641.1| Typhlosaurus lomii recombination activating gene ... 40 8.1
18gb|AY662640.1| Typhlosaurus gariepensis recombination activating... 40 8.1
19gb|AY662639.1| Acontias meleagris recombination activating gene ... 40 8.1
20gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 8.1
21gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 1... 40 8.1
22gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, comp... 40 8.1
23emb|BX640418.1| Bordetella pertussis strain Tohama I, complete g... 40 8.1
24emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete g... 40 8.1
25gb|AF176573.1| Hepatitis C virus polyprotein precursor, gene, co... 40 8.1
26gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, comple... 40 8.1
27dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, co... 40 8.1
28gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 40 8.1
29gb|AC161588.2| Mus musculus BAC clone RP24-447G12 from chromosom... 40 8.1
30gb|DQ061364.1| Hepatitis C virus isolate AD17c10 polyprotein gen... 40 8.1
31gb|DQ061353.1| Hepatitis C virus isolate AD12c03 polyprotein gen... 40 8.1
32dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
33dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.1
34emb|BX842028.1|CNS09Y8N Arabidopsis thaliana Full-length cDNA Co... 40 8.1
35dbj|AB206581.1| Oryza sativa (japonica cultivar-group) OsCPD2 mR... 40 8.1
36dbj|AB206580.1| Oryza sativa (japonica cultivar-group) OsCPD1 mR... 40 8.1
37gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, com... 40 8.1
38gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Can... 40 8.1
39gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome ... 40 8.1
40dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, com... 40 8.1
41gb|AF207761.1|AF207761 Hepatitis C virus strain MD20 complete ge... 40 8.1
42dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic... 40 8.1
43emb|AL935046.6| Zebrafish DNA sequence from clone CH211-171K3, c... 40 8.1
44ref|NM_209453.1| Eremothecium gossypii ADR004Cp (ADR004C), mRNA 40 8.1
45gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, comple... 40 8.1
46dbj|AK060257.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.1
47emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA2... 40 8.1
48gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
49gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.1
50emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.1
51emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.1
52emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 40 8.1
53emb|AL807822.7| Mouse DNA sequence from clone RP23-31A20 on chro... 40 8.1 
>dbj|AK067387.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099O15, full
            insert sequence
          Length = 3247

 Score =  569 bits (287), Expect = e-159
 Identities = 480/543 (88%), Gaps = 1/543 (0%)
 Strand = Plus / Plus

                                                                        
Query: 54   gcgccgcccaagttctccaaggcggccaggaggttctacaacgataatatcaaggnagca 113
            ||||||||||||||||||||||| || ||||| |||||||| || |||||||||| ||||
Sbjct: 487  gcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaagg-agca 545

                                                                        
Query: 114  cgagccgcagcgtctcgccaaggtcctcgccgccgcaggagtggcctcaagaaggaccag 173
            ||| |||||||| |||||||||||||| ||||| ||||||||||||||| |||||||  |
Sbjct: 546  cgaaccgcagcggctcgccaaggtccttgccgcggcaggagtggcctcacgaaggacatg 605

                                                                        
Query: 174  cgaggagctcattttccaagggaaggtgactgtcaatggttctgtctgcactgctcccca 233
            |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 606  cgaggagctcatcttccaagggaaggtgaccgtcaatggttctgtctgcactgcacccca 665

                                                                        
Query: 234  gaccaaagtcgacatctcaaaggattctatctacgttaacgggaatcgcatttccaagaa 293
            ||||||||| ||||||||||||||||||||||| ||||| || || ||||||||||||||
Sbjct: 666  gaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaagaa 725

                                                                        
Query: 294  gttaccaccaaagctctattttgctgtgaataagccaaaagggtatatttgctcatccgg 353
            | | || || ||| | ||||||||||| || |||||| ||||||||||||| || |  ||
Sbjct: 726  gcttcctccgaagttatattttgctgttaacaagccataagggtatatttgttcctgtgg 785

                                                                        
Query: 354  tgaagagaagtctgttatctccttactggatgactacttgaaaggctggaacaaacttca 413
            ||||   |||||  ||||||||||| | |||||||| ||||| || ||||||||  ||||
Sbjct: 786  tgaaccaaagtccattatctccttatttgatgactatttgaagggttggaacaagattca 845

                                                                        
Query: 414  gccaggagtaccaaaaccccgcttgtttactgtgggtcgtcttgatgttgccacaactgg 473
             ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct: 846  accaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaagtgg 905

                                                                        
Query: 474  tttgataatagttacaaatgatggtgaatttgcccagaaagtctcacacccttcgtcaaa 533
            |||||||||| |||||||||| ||||| |||||||||||| |||||||||||||||||||
Sbjct: 906  tttgataataattacaaatgacggtgagtttgcccagaaactctcacacccttcgtcaaa 965

                                                                        
Query: 534  cataacaaaggaatatgtagtaactatagatggagcagtgcacaagaaacaccttgtagc 593
             ||||  ||||||||||| ||||||||||||||| |||||||||  || |||||| ||||
Sbjct: 966  tataatgaaggaatatgtggtaactatagatggaccagtgcacagaaatcaccttatagc 1025

               
Query: 594  tat 596
            |||
Sbjct: 1026 tat 1028
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                           
Query: 410     ttcagccaggagtaccaaaaccccgcttgtttactgtgggtcgtcttgatgttgccacaa 469
               |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2884731 ttcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaa 2884790

                                        
Query: 470     ctggtttgataatagttacaaatga 494
                ||||||||||||| ||||||||||
Sbjct: 2884791 gtggtttgataataattacaaatga 2884815



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                           
Query: 153     agtggcctcaagaaggaccagcgaggagctcattttccaagggaaggtgactgtcaatgg 212
               |||||||||| |||||||  ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2883984 agtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatgg 2884043

                                     
Query: 213     ttctgtctgcactgctccccag 234
               ||||||||||||||| ||||||
Sbjct: 2884044 ttctgtctgcactgcaccccag 2884065



 Score =  113 bits (57), Expect = 7e-22
 Identities = 91/101 (90%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                           
Query: 54      gcgccgcccaagttctccaaggcggccaggaggttctacaacgataatatcaaggnagca 113
               ||||||||||||||||||||||| || ||||| |||||||| || |||||||||| ||||
Sbjct: 2883757 gcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaagg-agca 2883815

                                                        
Query: 114     cgagccgcagcgtctcgccaaggtcctcgccgccgcaggag 154
               ||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 2883816 cgaaccgcagcggctcgccaaggtccttgccgcggcaggag 2883856



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                           
Query: 233     agaccaaagtcgacatctcaaaggattctatctacgttaacgggaatcgcatttccaaga 292
               |||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 2884325 agaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaaga 2884384

                                                            
Query: 293     agttaccaccaaagctctattttgctgtgaataagccaaaagggt 337
               || | || || ||| | ||||||||||| || |||||||||||||
Sbjct: 2884385 agcttcctccgaagttatattttgctgttaacaagccaaaagggt 2884429



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                          
Query: 496     ggtgaatttgcccagaaagtctcacacccttcgtcaaacataa 538
               ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 2884902 ggtgagtttgcccagaaactctcacacccttcgtcaaatataa 2884944



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 546     atatgtagtaactatagatggagcagtgcacaagaaacaccttgtagctat 596
               |||||| ||||||||||||||| |||||||||  || |||||| |||||||
Sbjct: 2885322 atatgtggtaactatagatggaccagtgcacagaaatcaccttatagctat 2885372
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>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0016I15, complete sequence
          Length = 166282

 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                         
Query: 410   ttcagccaggagtaccaaaaccccgcttgtttactgtgggtcgtcttgatgttgccacaa 469
             |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 22218 ttcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaa 22277

                                      
Query: 470   ctggtttgataatagttacaaatga 494
              ||||||||||||| ||||||||||
Sbjct: 22278 gtggtttgataataattacaaatga 22302



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                         
Query: 153   agtggcctcaagaaggaccagcgaggagctcattttccaagggaaggtgactgtcaatgg 212
             |||||||||| |||||||  ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 21471 agtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatgg 21530

                                   
Query: 213   ttctgtctgcactgctccccag 234
             ||||||||||||||| ||||||
Sbjct: 21531 ttctgtctgcactgcaccccag 21552



 Score =  113 bits (57), Expect = 7e-22
 Identities = 91/101 (90%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                         
Query: 54    gcgccgcccaagttctccaaggcggccaggaggttctacaacgataatatcaaggnagca 113
             ||||||||||||||||||||||| || ||||| |||||||| || |||||||||| ||||
Sbjct: 21244 gcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaagg-agca 21302

                                                      
Query: 114   cgagccgcagcgtctcgccaaggtcctcgccgccgcaggag 154
             ||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 21303 cgaaccgcagcggctcgccaaggtccttgccgcggcaggag 21343



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                         
Query: 233   agaccaaagtcgacatctcaaaggattctatctacgttaacgggaatcgcatttccaaga 292
             |||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 21812 agaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaaga 21871

                                                          
Query: 293   agttaccaccaaagctctattttgctgtgaataagccaaaagggt 337
             || | || || ||| | ||||||||||| || |||||||||||||
Sbjct: 21872 agcttcctccgaagttatattttgctgttaacaagccaaaagggt 21916



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                        
Query: 496   ggtgaatttgcccagaaagtctcacacccttcgtcaaacataa 538
             ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 22389 ggtgagtttgcccagaaactctcacacccttcgtcaaatataa 22431



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 546   atatgtagtaactatagatggagcagtgcacaagaaacaccttgtagctat 596
             |||||| ||||||||||||||| |||||||||  || |||||| |||||||
Sbjct: 22809 atatgtggtaactatagatggaccagtgcacagaaatcaccttatagctat 22859
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                           
Query: 410     ttcagccaggagtaccaaaaccccgcttgtttactgtgggtcgtcttgatgttgccacaa 469
               |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 2884842 ttcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaa 2884901

                                        
Query: 470     ctggtttgataatagttacaaatga 494
                ||||||||||||| ||||||||||
Sbjct: 2884902 gtggtttgataataattacaaatga 2884926



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                           
Query: 153     agtggcctcaagaaggaccagcgaggagctcattttccaagggaaggtgactgtcaatgg 212
               |||||||||| |||||||  ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 2884095 agtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatgg 2884154

                                     
Query: 213     ttctgtctgcactgctccccag 234
               ||||||||||||||| ||||||
Sbjct: 2884155 ttctgtctgcactgcaccccag 2884176



 Score =  113 bits (57), Expect = 7e-22
 Identities = 91/101 (90%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                           
Query: 54      gcgccgcccaagttctccaaggcggccaggaggttctacaacgataatatcaaggnagca 113
               ||||||||||||||||||||||| || ||||| |||||||| || |||||||||| ||||
Sbjct: 2883868 gcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaagg-agca 2883926

                                                        
Query: 114     cgagccgcagcgtctcgccaaggtcctcgccgccgcaggag 154
               ||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 2883927 cgaaccgcagcggctcgccaaggtccttgccgcggcaggag 2883967



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                           
Query: 233     agaccaaagtcgacatctcaaaggattctatctacgttaacgggaatcgcatttccaaga 292
               |||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 2884436 agaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaaga 2884495

                                                            
Query: 293     agttaccaccaaagctctattttgctgtgaataagccaaaagggt 337
               || | || || ||| | ||||||||||| || |||||||||||||
Sbjct: 2884496 agcttcctccgaagttatattttgctgttaacaagccaaaagggt 2884540



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                          
Query: 496     ggtgaatttgcccagaaagtctcacacccttcgtcaaacataa 538
               ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 2885013 ggtgagtttgcccagaaactctcacacccttcgtcaaatataa 2885055



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 546     atatgtagtaactatagatggagcagtgcacaagaaacaccttgtagctat 596
               |||||| ||||||||||||||| |||||||||  || |||||| |||||||
Sbjct: 2885433 atatgtggtaactatagatggaccagtgcacagaaatcaccttatagctat 2885483
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>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0038D20, from chromosome 3, complete sequence
          Length = 165395

 Score =  129 bits (65), Expect = 1e-26
 Identities = 80/85 (94%)
 Strand = Plus / Plus

                                                                          
Query: 410    ttcagccaggagtaccaaaaccccgcttgtttactgtgggtcgtcttgatgttgccacaa 469
              |||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 156687 ttcaaccaggagtaccaaaaccgcgcttgtttactgtgggtcgtcttgatgttgctacaa 156746

                                       
Query: 470    ctggtttgataatagttacaaatga 494
               ||||||||||||| ||||||||||
Sbjct: 156747 gtggtttgataataattacaaatga 156771



 Score =  115 bits (58), Expect = 2e-22
 Identities = 76/82 (92%)
 Strand = Plus / Plus

                                                                          
Query: 153    agtggcctcaagaaggaccagcgaggagctcattttccaagggaaggtgactgtcaatgg 212
              |||||||||| |||||||  ||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 155940 agtggcctcacgaaggacatgcgaggagctcatcttccaagggaaggtgaccgtcaatgg 155999

                                    
Query: 213    ttctgtctgcactgctccccag 234
              ||||||||||||||| ||||||
Sbjct: 156000 ttctgtctgcactgcaccccag 156021



 Score =  113 bits (57), Expect = 7e-22
 Identities = 91/101 (90%), Gaps = 1/101 (0%)
 Strand = Plus / Plus

                                                                          
Query: 54     gcgccgcccaagttctccaaggcggccaggaggttctacaacgataatatcaaggnagca 113
              ||||||||||||||||||||||| || ||||| |||||||| || |||||||||| ||||
Sbjct: 155713 gcgccgcccaagttctccaaggccgcgaggagattctacaatgagaatatcaagg-agca 155771

                                                       
Query: 114    cgagccgcagcgtctcgccaaggtcctcgccgccgcaggag 154
              ||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 155772 cgaaccgcagcggctcgccaaggtccttgccgcggcaggag 155812



 Score =  105 bits (53), Expect = 2e-19
 Identities = 92/105 (87%)
 Strand = Plus / Plus

                                                                          
Query: 233    agaccaaagtcgacatctcaaaggattctatctacgttaacgggaatcgcatttccaaga 292
              |||||||||| ||||||||||||||||||||||| ||||| || || |||||||||||||
Sbjct: 156281 agaccaaagttgacatctcaaaggattctatctatgttaatggaaaccgcatttccaaga 156340

                                                           
Query: 293    agttaccaccaaagctctattttgctgtgaataagccaaaagggt 337
              || | || || ||| | ||||||||||| || |||||||||||||
Sbjct: 156341 agcttcctccgaagttatattttgctgttaacaagccaaaagggt 156385



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Plus

                                                         
Query: 496    ggtgaatttgcccagaaagtctcacacccttcgtcaaacataa 538
              ||||| |||||||||||| ||||||||||||||||||| ||||
Sbjct: 156858 ggtgagtttgcccagaaactctcacacccttcgtcaaatataa 156900



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 546    atatgtagtaactatagatggagcagtgcacaagaaacaccttgtagctat 596
              |||||| ||||||||||||||| |||||||||  || |||||| |||||||
Sbjct: 157278 atatgtggtaactatagatggaccagtgcacagaaatcaccttatagctat 157328
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>ref|NM_129471.2| Arabidopsis thaliana RNA binding / pseudouridine synthase/
           pseudouridylate synthase AT2G39140 mRNA, complete cds
          Length = 1495

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                       
Query: 439 tttactgtgggtcgtcttgatgttgccacaactggtttgataatagttacaaatgatggt 498
           |||||||| ||||||||||||||||||||||| || |||||| | |||||||||||||| 
Sbjct: 857 tttactgttggtcgtcttgatgttgccacaacgggattgatagttgttacaaatgatgga 916

                                        
Query: 499 gaatttgcccagaaagtctcacacccttc 527
           || || || |||||| | ||||| |||||
Sbjct: 917 gatttcgcacagaaactttcacatccttc 945
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>emb|BX842445.1|CNS0A8U5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB81ZD06 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1404

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                       
Query: 439 tttactgtgggtcgtcttgatgttgccacaactggtttgataatagttacaaatgatggt 498
           |||||||| ||||||||||||||||||||||| || |||||| | |||||||||||||| 
Sbjct: 809 tttactgttggtcgtcttgatgttgccacaacgggattgatagttgttacaaatgatgga 868

                                        
Query: 499 gaatttgcccagaaagtctcacacccttc 527
           || || || |||||| | ||||| |||||
Sbjct: 869 gatttcgcacagaaactttcacatccttc 897
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>gb|AY088622.1| Arabidopsis thaliana clone 853 mRNA, complete sequence
          Length = 1473

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                       
Query: 439 tttactgtgggtcgtcttgatgttgccacaactggtttgataatagttacaaatgatggt 498
           |||||||| ||||||||||||||||||||||| || |||||| | |||||||||||||| 
Sbjct: 844 tttactgttggtcgtcttgatgttgccacaacgggattgatagttgttacaaatgatgga 903

                                        
Query: 499 gaatttgcccagaaagtctcacacccttc 527
           || || || |||||| | ||||| |||||
Sbjct: 904 gatttcgcacagaaactttcacatccttc 932
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>dbj|AK117682.1| Arabidopsis thaliana At2g39140 mRNA for unknown protein, complete
           cds, clone: RAFL17-34-K11
          Length = 1534

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                       
Query: 439 tttactgtgggtcgtcttgatgttgccacaactggtttgataatagttacaaatgatggt 498
           |||||||| ||||||||||||||||||||||| || |||||| | |||||||||||||| 
Sbjct: 896 tttactgttggtcgtcttgatgttgccacaacgggattgatagttgttacaaatgatgga 955

                                        
Query: 499 gaatttgcccagaaagtctcacacccttc 527
           || || || |||||| | ||||| |||||
Sbjct: 956 gatttcgcacagaaactttcacatccttc 984
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>gb|AC004697.3| Arabidopsis thaliana chromosome 2 clone T16B24 map CIC10A06, complete
              sequence
          Length = 113950

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 55/60 (91%)
 Strand = Plus / Minus

                                                                          
Query: 439    tttactgtgggtcgtcttgatgttgccacaactggtttgataatagttacaaatgatggt 498
              |||||||| ||||||||||||||||||||||| || |||||| | |||||||||||||||
Sbjct: 106783 tttactgttggtcgtcttgatgttgccacaacgggattgatagttgttacaaatgatggt 106724
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>dbj|D10672.1|RICSINE1R3 Oryza sativa (japonica cultivar-group) p-SINE1-r3 gene, repeat
           sequence
          Length = 1517

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 49/52 (94%)
 Strand = Plus / Plus

                                                               
Query: 437 tgtttactgtgggtcgtcttgatgttgccacaactggtttgataatagttac 488
           |||||||||||||||||||||||||||| |||| ||||||||||||| ||||
Sbjct: 385 tgtttactgtgggtcgtcttgatgttgctacaagtggtttgataataattac 436



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 36/39 (92%), Gaps = 1/39 (2%)
 Strand = Plus / Plus

                                                  
Query: 501 atttgcccagaaagt-ctcacacccttcgtcaaacataa 538
           ||||||||||||| | |||||||||||||||||| ||||
Sbjct: 532 atttgcccagaaacttctcacacccttcgtcaaatataa 570



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 310 tattttgctgtgaataagccaaaagggt 337
           ||||||||||| || |||||||||||||
Sbjct: 30  tattttgctgttaacaagccaaaagggt 57
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>emb|CR936503.1| Lactobacillus sakei strain 23K complete genome
          Length = 1884661

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 460    gttgccacaactggtttgataat 482
              |||||||||||||||||||||||
Sbjct: 668706 gttgccacaactggtttgataat 668684
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>gb|BT013987.1| Lycopersicon esculentum clone 133032R, mRNA sequence
          Length = 1667

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 60/73 (82%)
 Strand = Plus / Plus

                                                                       
Query: 151 ggagtggcctcaagaaggaccagcgaggagctcattttccaagggaaggtgactgtcaat 210
           |||||||| || ||| ||| ||| || ||||| ||||| ||||||  ||| ||||| |||
Sbjct: 580 ggagtggcatccagacggagcagtgaagagctgatttttcaagggcgggtcactgtgaat 639

                        
Query: 211 ggttctgtctgca 223
           |||||||| ||||
Sbjct: 640 ggttctgtttgca 652



 Score = 40.1 bits (20), Expect = 8.1
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 454 cttgatgttgccacaactggtttgataatagttacaaatgatgg 497
           |||||||||||||| ||||| ||||| || || || ||||||||
Sbjct: 889 cttgatgttgccacgactggcttgattattgtgaccaatgatgg 932
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>emb|AL451163.8| Human DNA sequence from clone RP11-438G15 on chromosome 1, complete
             sequence
          Length = 72546

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   gatggagcagtgcacaagaaa 582
             |||||||||||||||||||||
Sbjct: 55383 gatggagcagtgcacaagaaa 55403
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>ref|XM_690805.1| PREDICTED: Danio rerio similar to Nesprin 1 (Nuclear envelope
            spectrin repeat protein 1) (Synaptic nuclear envelope
            protein 1) (Syne-1) (Myocyte nuclear envelope protein 1)
            (Myne-1) (Enaptin) (LOC567511), mRNA
          Length = 5865

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 210  tggttctgtctgcactgctcc 230
            |||||||||||||||||||||
Sbjct: 1475 tggttctgtctgcactgctcc 1455
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>emb|BX511113.8| Zebrafish DNA sequence from clone DKEY-38J10 in linkage group 17,
             complete sequence
          Length = 191193

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 210   tggttctgtctgcactgctcc 230
             |||||||||||||||||||||
Sbjct: 39534 tggttctgtctgcactgctcc 39514
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>gb|AY662641.1| Typhlosaurus lomii recombination activating gene 1 (RAG-1) gene,
            partial cds
          Length = 2885

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  tggatgactacttgaaaggc 399
            ||||||||||||||||||||
Sbjct: 1671 tggatgactacttgaaaggc 1690
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>gb|AY662640.1| Typhlosaurus gariepensis recombination activating gene 1 (RAG-1)
            gene, partial cds
          Length = 2885

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  tggatgactacttgaaaggc 399
            ||||||||||||||||||||
Sbjct: 1671 tggatgactacttgaaaggc 1690
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>gb|AY662639.1| Acontias meleagris recombination activating gene 1 (RAG-1) gene,
            partial cds
          Length = 2899

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 380  tggatgactacttgaaaggc 399
            ||||||||||||||||||||
Sbjct: 1650 tggatgactacttgaaaggc 1669
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 96     gataatatcaaggnagcacgagccgca 122
              ||||| ||||||| |||||||||||||
Sbjct: 826181 gataagatcaaggaagcacgagccgca 826155
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>gb|AC123526.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBa0059J06,
             complete sequence
          Length = 185449

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   gagccgcagcgtctcgccaa 134
             ||||||||||||||||||||
Sbjct: 64204 gagccgcagcgtctcgccaa 64223
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>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence
          Length = 244656

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 569    cagtgcacaagaaacacctt 588
              ||||||||||||||||||||
Sbjct: 191822 cagtgcacaagaaacacctt 191841
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>emb|BX640418.1| Bordetella pertussis strain Tohama I, complete genome; segment 8/12
          Length = 349346

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 129    cgccaaggtcctcgccgccgcagg 152
              |||||||||| |||||||||||||
Sbjct: 332813 cgccaaggtcgtcgccgccgcagg 332836
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>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome
          Length = 2799802

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1560906 ttacaaatgatggtgaattt 1560887
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>gb|AF176573.1| Hepatitis C virus polyprotein precursor, gene, complete cds
          Length = 9600

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ccaagttctccaaggcggcc 80
            ||||||||||||||||||||
Sbjct: 2595 ccaagttctccaaggcggcc 2576
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>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence
          Length = 125133

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 301    ccaaagctctattttgctgtgaataagc 328
              |||||||||| |||| ||||||||||||
Sbjct: 122939 ccaaagctctttttttctgtgaataagc 122912
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>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome
          Length = 2878529

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1610235 ttacaaatgatggtgaattt 1610216
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>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV,
              complete sequence
          Length = 1466886

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    aacgggaatcgcatttccaagaag 294
              |||||||||||||| |||||||||
Sbjct: 712106 aacgggaatcgcatctccaagaag 712129
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>gb|AC161588.2| Mus musculus BAC clone RP24-447G12 from chromosome 13, complete sequence
          Length = 211917

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 62     caagttctccaaggcggcca 81
              ||||||||||||||||||||
Sbjct: 163763 caagttctccaaggcggcca 163782
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>gb|DQ061364.1| Hepatitis C virus isolate AD17c10 polyprotein gene, complete cds
          Length = 5179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ccaagttctccaaggcggcc 80
            ||||||||||||||||||||
Sbjct: 2501 ccaagttctccaaggcggcc 2482
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>gb|DQ061353.1| Hepatitis C virus isolate AD12c03 polyprotein gene, partial cds
          Length = 5179

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ccaagttctccaaggcggcc 80
            ||||||||||||||||||||
Sbjct: 2501 ccaagttctccaaggcggcc 2482
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gagccgcagcgtctcgccaa 134
               ||||||||||||||||||||
Sbjct: 1907941 gagccgcagcgtctcgccaa 1907960
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gagccgcagcgtctcgccaa 134
               ||||||||||||||||||||
Sbjct: 1992649 gagccgcagcgtctcgccaa 1992668
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>emb|BX842028.1|CNS09Y8N Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS66ZF03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 933

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 42/48 (87%), Gaps = 1/48 (2%)
 Strand = Plus / Plus

                                                           
Query: 443 ctgtgggtcgtcttgatgttgccacaactggtttgataatagttacaa 490
           |||| |||||||||||||||||| |||| || |||||| | |||||||
Sbjct: 832 ctgttggtcgtcttgatgttgcc-caacgggattgatagttgttacaa 878
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>dbj|AB206581.1| Oryza sativa (japonica cultivar-group) OsCPD2 mRNA for cytochrome
           P450, complete cds
          Length = 1506

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gagccgcagcgtctcgccaa 134
           ||||||||||||||||||||
Sbjct: 174 gagccgcagcgtctcgccaa 155
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>dbj|AB206580.1| Oryza sativa (japonica cultivar-group) OsCPD1 mRNA for cytochrome
           P450, complete cds
          Length = 1506

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gagccgcagcgtctcgccaa 134
           ||||||||||||||||||||
Sbjct: 174 gagccgcagcgtctcgccaa 155
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>gb|AC129181.4| Mus musculus chromosome UL clone RP23-325P17, complete sequence
          Length = 204520

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 303    aaagctctattttgctgtgaataa 326
              |||||||||||||||| |||||||
Sbjct: 160201 aaagctctattttgctttgaataa 160178
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>gb|AC126471.4| Homo sapiens 12 BAC RP11-629O19 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 199945

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 281   gcatttccaagaagttacca 300
             ||||||||||||||||||||
Sbjct: 23758 gcatttccaagaagttacca 23739
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>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gctctattttgctgtgaata 325
              ||||||||||||||||||||
Sbjct: 161665 gctctattttgctgtgaata 161646
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>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2
          Length = 2820462

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1581148 ttacaaatgatggtgaattt 1581129
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>gb|AF207761.1|AF207761 Hepatitis C virus strain MD20 complete genome
          Length = 9379

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   ccaagttctccaaggcggcc 80
            ||||||||||||||||||||
Sbjct: 2583 ccaagttctccaaggcggcc 2564
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>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome
          Length = 2814816

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1533823 ttacaaatgatggtgaattt 1533804
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>emb|AL935046.6| Zebrafish DNA sequence from clone CH211-171K3, complete sequence
          Length = 162239

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 209    atggttctgtctgcactgct 228
              ||||||||||||||||||||
Sbjct: 154929 atggttctgtctgcactgct 154910
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>ref|NM_209453.1| Eremothecium gossypii ADR004Cp (ADR004C), mRNA
          Length = 303

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 271 aacgggaatcgcatttccaagaag 294
           |||||||||||||| |||||||||
Sbjct: 251 aacgggaatcgcatctccaagaag 228
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>gb|AC154412.3| Mus musculus BAC clone RP24-225G4 from 14, complete sequence
          Length = 182048

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gctctattttgctgtgaata 325
             ||||||||||||||||||||
Sbjct: 15359 gctctattttgctgtgaata 15340
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>dbj|AK060257.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-004-E10, full
           insert sequence
          Length = 1784

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 gagccgcagcgtctcgccaa 134
           ||||||||||||||||||||
Sbjct: 258 gagccgcagcgtctcgccaa 239
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>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome
          Length = 2902619

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1643651 ttacaaatgatggtgaattt 1643632
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gagccgcagcgtctcgccaa 134
               ||||||||||||||||||||
Sbjct: 2000430 gagccgcagcgtctcgccaa 2000449
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 115     gagccgcagcgtctcgccaa 134
               ||||||||||||||||||||
Sbjct: 1907892 gagccgcagcgtctcgccaa 1907911
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>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 128619

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    gagccgcagcgtctcgccaa 134
              ||||||||||||||||||||
Sbjct: 102632 gagccgcagcgtctcgccaa 102651
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>emb|AL928752.2|CNS08CBP Oryza sativa chromosome 12, . BAC OSJNBb0034E23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 107247

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 115   gagccgcagcgtctcgccaa 134
             ||||||||||||||||||||
Sbjct: 60280 gagccgcagcgtctcgccaa 60261
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 485     ttacaaatgatggtgaattt 504
               ||||||||||||||||||||
Sbjct: 1484431 ttacaaatgatggtgaattt 1484412
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>emb|AL807822.7| Mouse DNA sequence from clone RP23-31A20 on chromosome X, complete
             sequence
          Length = 116719

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   accaccaaagctctattttg 316
             ||||||||||||||||||||
Sbjct: 18035 accaccaaagctctattttg 18016


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,541,555
Number of Sequences: 3902068
Number of extensions: 4541555
Number of successful extensions: 83399
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 82957
Number of HSP's gapped (non-prelim): 437
length of query: 596
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 573
effective length of database: 17,143,297,704
effective search space: 9823109584392
effective search space used: 9823109584392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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