ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9c17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_478169.1| Oryza sativa (japonica cultivar-group), mRNA 377 e-101
2dbj|AK067941.1| Oryza sativa (japonica cultivar-group) cDNA clon... 377 e-101
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
4dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic D... 137 5e-29
5gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's ... 44 0.53
6gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, comple... 44 0.53
7gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, co... 42 2.1
8emb|CR847534.13| Zebrafish DNA sequence from clone DKEY-27E20 in... 42 2.1
9gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome... 42 2.1
10gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, comple... 42 2.1
11gb|AC160134.2| Mus musculus BAC clone RP23-139G11 from chromosom... 40 8.3
12ref|XM_456160.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F24244g ... 40 8.3
13emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in... 40 8.3
14emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.3
15gb|AC116560.5| Ustilago hordei clone uhobac-4k21, complete sequence 40 8.3
16gb|AC114899.5| Ustilago hordei strain 4875-4 clone uhobac-1n1, c... 40 8.3
17dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
18gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, comple... 40 8.3
19dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
20emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 i... 40 8.3
21emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain... 40 8.3
22emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 ... 40 8.3
23emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chr... 40 8.3
24gb|AC055854.14| Homo sapiens chromosome 8, clone RP11-459E5, com... 40 8.3

>ref|XM_478169.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1179

 Score =  377 bits (190), Expect = e-101
 Identities = 359/414 (86%), Gaps = 1/414 (0%)
 Strand = Plus / Plus

                                                                       
Query: 169 tgcttcagcagaacaagaagattcaggaagccaaccgtgcacctgatgatttcccaaact 228
           |||||||||||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 363 tgcttcagcagaacaagaagatccaggaagccaaccgggctcctgacgattttccgaatt 422

                                                                       
Query: 229 tcatcagagaaggttttcaggtcaaagtagtgacacccgacaactacataacacgggatt 288
           ||||||| ||||||||  | ||||||||||||||| | |||||||||||||| || || |
Sbjct: 423 tcatcagggaaggtttcgaagtcaaagtagtgacatctgacaactacataacgcgagact 482

                                                                       
Query: 289 ccggattaatatatgaggatgtcaaagttggtacaggcgattgcccgaaggatggtcagc 348
           | ||  || | ||||||||  ||||||||||||| ||| | |  || |||||||||||||
Sbjct: 483 ctgggctactgtatgaggacatcaaagttggtacgggcaactctccaaaggatggtcagc 542

                                                                       
Query: 349 aggttatatttcactatgtgggctacaacgaatcaggacgaaggatagatagcacctaca 408
           |||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 543 aggttatatttcactatgtgggctacaatgagtcagggcgcaggatagatagcacctaca 602

                                                                       
Query: 409 tccagggttcgcctgccaaaattcggctaggcaacaaatcattagttccaggttttgaag 468
           | |||||||| ||||||||||||||| |||| |||||| || | ||||||||||||||||
Sbjct: 603 ttcagggttcacctgccaaaattcggttagggaacaaaacactggttccaggttttgaag 662

                                                                       
Query: 469 aggggattcgggacatgaaaccaggggggaagagaagactaattatacctcctgagcttg 528
           | ||||| ||||||||||||||||| || ||||||||| | ||||||||||| |||||||
Sbjct: 663 aagggatacgggacatgaaaccaggtggtaagagaagaattattatacctccagagcttg 722

                                                                 
Query: 529 gtcctcctgttgggccattcgacgttcttcagcgcgaaacagtttgaagtattc 582
           ||||||||||||||||  || || |||||||| ||||| ||||| || ||||||
Sbjct: 723 gtcctcctgttgggcc-gtcaacattcttcagtgcgaagcagttcgaggtattc 775



to top

>dbj|AK067941.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121F22, full
           insert sequence
          Length = 1179

 Score =  377 bits (190), Expect = e-101
 Identities = 359/414 (86%), Gaps = 1/414 (0%)
 Strand = Plus / Plus

                                                                       
Query: 169 tgcttcagcagaacaagaagattcaggaagccaaccgtgcacctgatgatttcccaaact 228
           |||||||||||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 363 tgcttcagcagaacaagaagatccaggaagccaaccgggctcctgacgattttccgaatt 422

                                                                       
Query: 229 tcatcagagaaggttttcaggtcaaagtagtgacacccgacaactacataacacgggatt 288
           ||||||| ||||||||  | ||||||||||||||| | |||||||||||||| || || |
Sbjct: 423 tcatcagggaaggtttcgaagtcaaagtagtgacatctgacaactacataacgcgagact 482

                                                                       
Query: 289 ccggattaatatatgaggatgtcaaagttggtacaggcgattgcccgaaggatggtcagc 348
           | ||  || | ||||||||  ||||||||||||| ||| | |  || |||||||||||||
Sbjct: 483 ctgggctactgtatgaggacatcaaagttggtacgggcaactctccaaaggatggtcagc 542

                                                                       
Query: 349 aggttatatttcactatgtgggctacaacgaatcaggacgaaggatagatagcacctaca 408
           |||||||||||||||||||||||||||| || ||||| || |||||||||||||||||||
Sbjct: 543 aggttatatttcactatgtgggctacaatgagtcagggcgcaggatagatagcacctaca 602

                                                                       
Query: 409 tccagggttcgcctgccaaaattcggctaggcaacaaatcattagttccaggttttgaag 468
           | |||||||| ||||||||||||||| |||| |||||| || | ||||||||||||||||
Sbjct: 603 ttcagggttcacctgccaaaattcggttagggaacaaaacactggttccaggttttgaag 662

                                                                       
Query: 469 aggggattcgggacatgaaaccaggggggaagagaagactaattatacctcctgagcttg 528
           | ||||| ||||||||||||||||| || ||||||||| | ||||||||||| |||||||
Sbjct: 663 aagggatacgggacatgaaaccaggtggtaagagaagaattattatacctccagagcttg 722

                                                                 
Query: 529 gtcctcctgttgggccattcgacgttcttcagcgcgaaacagtttgaagtattc 582
           ||||||||||||||||  || || |||||||| ||||| ||||| || ||||||
Sbjct: 723 gtcctcctgttgggcc-gtcaacattcttcagtgcgaagcagttcgaggtattc 775



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  137 bits (69), Expect = 5e-29
 Identities = 102/113 (90%)
 Strand = Plus / Plus

                                                                            
Query: 348      caggttatatttcactatgtgggctacaacgaatcaggacgaaggatagatagcacctac 407
                ||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 18176550 caggttatatttcactatgtgggctacaatgagtcagggcgcaggatagatagcacctac 18176609

                                                                     
Query: 408      atccagggttcgcctgccaaaattcggctaggcaacaaatcattagttccagg 460
                || |||||||| ||||||||||||||| |||| |||||| || | ||||||||
Sbjct: 18176610 attcagggttcacctgccaaaattcggttagggaacaaaacactggttccagg 18176662



 Score =  107 bits (54), Expect = 4e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                            
Query: 457      caggttttgaagaggggattcgggacatgaaaccaggggggaagagaagactaattatac 516
                ||||||||||||| ||||| ||||||||||||||||| || ||||||||| | |||||||
Sbjct: 18176836 caggttttgaagaagggatacgggacatgaaaccaggtggtaagagaagaattattatac 18176895

                                      
Query: 517      ctcctgagcttggtcctcctgt 538
                |||| |||||||||||||||||
Sbjct: 18176896 ctccagagcttggtcctcctgt 18176917



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                            
Query: 169      tgcttcagcagaacaagaagattcaggaagccaaccgtgcacctgatgatttcccaaact 228
                |||||||||||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 18175624 tgcttcagcagaacaagaagatccaggaagccaaccgggctcctgacgattttccgaatt 18175683

                              
Query: 229      tcatcagagaaggt 242
                ||||||| ||||||
Sbjct: 18175684 tcatcagggaaggt 18175697



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                            
Query: 249      gtcaaagtagtgacacccgacaactacataacacgggattccggattaatatatgaggat 308
                ||||||||||||||| | |||||||||||||| || || || ||  || | |||||||| 
Sbjct: 18176076 gtcaaagtagtgacatctgacaactacataacgcgagactctgggctactgtatgaggac 18176135

                                                             
Query: 309      gtcaaagttggtacaggcgattgcccgaaggatggtcagcaggtt 353
                 ||||||||||||| ||| | |  || ||||||||||||||||||
Sbjct: 18176136 atcaaagttggtacgggcaactctccaaaggatggtcagcaggtt 18176180



to top

>dbj|AP005190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0477A12
          Length = 138141

 Score =  137 bits (69), Expect = 5e-29
 Identities = 102/113 (90%)
 Strand = Plus / Plus

                                                                          
Query: 348    caggttatatttcactatgtgggctacaacgaatcaggacgaaggatagatagcacctac 407
              ||||||||||||||||||||||||||||| || ||||| || ||||||||||||||||||
Sbjct: 111856 caggttatatttcactatgtgggctacaatgagtcagggcgcaggatagatagcacctac 111915

                                                                   
Query: 408    atccagggttcgcctgccaaaattcggctaggcaacaaatcattagttccagg 460
              || |||||||| ||||||||||||||| |||| |||||| || | ||||||||
Sbjct: 111916 attcagggttcacctgccaaaattcggttagggaacaaaacactggttccagg 111968



 Score =  107 bits (54), Expect = 4e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                          
Query: 457    caggttttgaagaggggattcgggacatgaaaccaggggggaagagaagactaattatac 516
              ||||||||||||| ||||| ||||||||||||||||| || ||||||||| | |||||||
Sbjct: 112142 caggttttgaagaagggatacgggacatgaaaccaggtggtaagagaagaattattatac 112201

                                    
Query: 517    ctcctgagcttggtcctcctgt 538
              |||| |||||||||||||||||
Sbjct: 112202 ctccagagcttggtcctcctgt 112223



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Plus

                                                                          
Query: 169    tgcttcagcagaacaagaagattcaggaagccaaccgtgcacctgatgatttcccaaact 228
              |||||||||||||||||||||| |||||||||||||| || ||||| ||||| || || |
Sbjct: 110930 tgcttcagcagaacaagaagatccaggaagccaaccgggctcctgacgattttccgaatt 110989

                            
Query: 229    tcatcagagaaggt 242
              ||||||| ||||||
Sbjct: 110990 tcatcagggaaggt 111003



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 87/105 (82%)
 Strand = Plus / Plus

                                                                          
Query: 249    gtcaaagtagtgacacccgacaactacataacacgggattccggattaatatatgaggat 308
              ||||||||||||||| | |||||||||||||| || || || ||  || | |||||||| 
Sbjct: 111382 gtcaaagtagtgacatctgacaactacataacgcgagactctgggctactgtatgaggac 111441

                                                           
Query: 309    gtcaaagttggtacaggcgattgcccgaaggatggtcagcaggtt 353
               ||||||||||||| ||| | |  || ||||||||||||||||||
Sbjct: 111442 atcaaagttggtacgggcaactctccaaaggatggtcagcaggtt 111486



to top

>gb|AC109039.10| Rattus norvegicus 1 BAC CH230-145B9 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215780

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 77     tcttgctctgttctttgctaca 98
              ||||||||||||||||||||||
Sbjct: 156987 tcttgctctgttctttgctaca 156966



to top

>gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, complete sequence
          Length = 124740

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 446    atcattagttccaggttttgaa 467
              ||||||||||||||||||||||
Sbjct: 117823 atcattagttccaggttttgaa 117844



to top

>gb|AC124226.12| Mus musculus chromosome 15, clone RP23-94G21, complete sequence
          Length = 189787

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 138   aaaaccataaatccttatgag 158
             |||||||||||||||||||||
Sbjct: 32323 aaaaccataaatccttatgag 32303



to top

>emb|CR847534.13| Zebrafish DNA sequence from clone DKEY-27E20 in linkage group 3, complete
              sequence
          Length = 211145

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    cttcagcagaacaagaagatt 191
              |||||||||||||||||||||
Sbjct: 137123 cttcagcagaacaagaagatt 137143



to top

>gb|AC159647.2| Mus musculus BAC clone RP23-66A14 from chromosome 12, complete sequence
          Length = 213946

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 168    ttgcttcagcagaacaagaag 188
              |||||||||||||||||||||
Sbjct: 155930 ttgcttcagcagaacaagaag 155910



to top

>gb|AC124409.5| Mus musculus BAC clone RP24-262P14 from 8, complete sequence
          Length = 178779

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 348    caggttatatttcactatgtgggct 372
              |||||||||||||||| ||||||||
Sbjct: 143336 caggttatatttcactctgtgggct 143360



to top

>gb|AC160134.2| Mus musculus BAC clone RP23-139G11 from chromosome 9, complete sequence
          Length = 176272

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 229    tcatcagagaaggttttcaggtca 252
              ||||||||||| ||||||||||||
Sbjct: 129837 tcatcagagaaagttttcaggtca 129814



to top

>ref|XM_456160.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F24244g predicted mRNA
          Length = 2784

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 atatgaggatgtcaaagttg 318
           ||||||||||||||||||||
Sbjct: 477 atatgaggatgtcaaagttg 496



to top

>emb|BX908793.14| Zebrafish DNA sequence from clone DKEY-104G4 in linkage group 3,
             complete sequence
          Length = 102377

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 144   ataaatccttatgaggaaag 163
             ||||||||||||||||||||
Sbjct: 75569 ataaatccttatgaggaaag 75550



to top

>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 2602197

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 299     atatgaggatgtcaaagttg 318
               ||||||||||||||||||||
Sbjct: 2264117 atatgaggatgtcaaagttg 2264098



to top

>gb|AC116560.5| Ustilago hordei clone uhobac-4k21, complete sequence
          Length = 100958

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 518   tcctgagcttggtcctcctgttgg 541
             ||||||||||||||||||| ||||
Sbjct: 16951 tcctgagcttggtcctcctcttgg 16928



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 518  tcctgagcttggtcctcctgttgg 541
            ||||||||||||||||||| ||||
Sbjct: 5006 tcctgagcttggtcctcctcttgg 4983



to top

>gb|AC114899.5| Ustilago hordei strain 4875-4 clone uhobac-1n1, complete sequence
          Length = 100185

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 518   tcctgagcttggtcctcctgttgg 541
             ||||||||||||||||||| ||||
Sbjct: 52755 tcctgagcttggtcctcctcttgg 52778



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 518   tcctgagcttggtcctcctgttgg 541
             ||||||||||||||||||| ||||
Sbjct: 40810 tcctgagcttggtcctcctcttgg 40833



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 373      acaacgaatcaggacgaaggatag 396
                |||||||||| |||||||||||||
Sbjct: 21321934 acaacgaatctggacgaaggatag 21321911



to top

>gb|AC093772.2| Homo sapiens BAC clone RP11-125O18 from 4, complete sequence
          Length = 175490

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 294    ttaatatatgaggatgtcaa 313
              ||||||||||||||||||||
Sbjct: 137037 ttaatatatgaggatgtcaa 137018



to top

>dbj|AP003714.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0656E03
          Length = 181786

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 373    acaacgaatcaggacgaaggatag 396
              |||||||||| |||||||||||||
Sbjct: 117310 acaacgaatctggacgaaggatag 117287



to top

>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19,
              complete sequence
          Length = 171679

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    agcaggttatatttcactat 365
              ||||||||||||||||||||
Sbjct: 102615 agcaggttatatttcactat 102634



to top

>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364
          Length = 526707

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 518    tcctgagcttggtcctcctgttgg 541
              ||||||||||||||||||| ||||
Sbjct: 326760 tcctgagcttggtcctcctcttgg 326783



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 518    tcctgagcttggtcctcctgttgg 541
              ||||||||||||||||||| ||||
Sbjct: 314815 tcctgagcttggtcctcctcttgg 314838



to top

>emb|AL929150.12| Zebrafish DNA sequence from clone CH211-196H16 in linkage group 1,
             complete sequence
          Length = 229480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   gagaaggttttcaggtcaaagtag 258
             ||||||||||||| ||||||||||
Sbjct: 51079 gagaaggttttcaagtcaaagtag 51056



to top

>emb|AL672089.17| Mouse DNA sequence from clone RP23-295D9 on chromosome X, complete
              sequence
          Length = 215390

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     ctcttgctctgttctttgct 95
              ||||||||||||||||||||
Sbjct: 112322 ctcttgctctgttctttgct 112303



to top

>gb|AC055854.14| Homo sapiens chromosome 8, clone RP11-459E5, complete sequence
          Length = 138388

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 458   aggttttgaagaggggattc 477
             ||||||||||||||||||||
Sbjct: 33607 aggttttgaagaggggattc 33588


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,618,387
Number of Sequences: 3902068
Number of extensions: 4618387
Number of successful extensions: 77510
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77210
Number of HSP's gapped (non-prelim): 296
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top