Clone Name | bags9c15 |
---|---|
Clone Library Name | barley_pub |
>RLA2A_MAIZE (P46252) 60S acidic ribosomal protein P2A (P2)| Length = 111 Score = 108 bits (270), Expect = 9e-24 Identities = 59/111 (53%), Positives = 67/111 (60%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 F+AAYLLA L+GNASPSA+DLT+ILESVGCE+DNEKMEL+L Q+ GKDITEL+AAGREKF Sbjct: 2 FVAAYLLAVLAGNASPSADDLTAILESVGCEVDNEKMELLLSQLSGKDITELIAAGREKF 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGFSLFD Sbjct: 62 -ASVPCGGGGVAVAAAAPAAGGAAPAAEAKKEEKVEEKEESDDDMGFSLFD 111
>RLA2B_MAIZE (O24415) 60S acidic ribosomal protein P2B| Length = 113 Score = 87.0 bits (214), Expect = 3e-17 Identities = 47/110 (42%), Positives = 58/110 (52%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 IAAYLLA L GN SP+A+D+ SILESVG E D EK+E +L ++K KDITE++AAGRE+ Sbjct: 4 IAAYLLAVLGGNTSPTADDVKSILESVGAEADEEKLEFLLTELKDKDITEVIAAGRERLS 63 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGFSLFD Sbjct: 64 SVPSGGGAIDMGAPAAVAGGGAAPAEEAKKEEKVEEKEESDEDMGFSLFD 113
>RLA2_PARAR (P41099) 60S acidic ribosomal protein P2| Length = 114 Score = 81.3 bits (199), Expect = 2e-15 Identities = 46/110 (41%), Positives = 59/110 (53%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 IAA+LLA L GN SP+ EDL SIL SVG + D++K+EL+L QVKGKDITEL+A+GRE+ Sbjct: 4 IAAFLLALLGGNTSPTDEDLKSILASVGADADDDKIELLLSQVKGKDITELIASGRERL- 62 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+++GFSLFD Sbjct: 63 ASVPSGGGVAVAAAAGGGGGDAPAAAAEEPKKEEKSEEESDEELGFSLFD 112
>RLA2A_ARATH (Q9SLF7) 60S acidic ribosomal protein P2-A| Length = 115 Score = 77.8 bits (190), Expect = 2e-14 Identities = 44/112 (39%), Positives = 58/112 (51%), Gaps = 2/112 (1%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLLA LSG ASP++ D+ +IL SVG E ++ ++EL+L +VKGKD+ EL+AAGREK Sbjct: 4 VAAYLLAVLSGKASPTSADIKTILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLA 63 Query: 186 X--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGFSLF+ Sbjct: 64 SVPSGGGGGVAVASATSGGGGGGGASAAESKKEEKKEEKEESDDDMGFSLFE 115
>RLA2_ALTAL (P42037) 60S acidic ribosomal protein P2 (Minor allergen Alt a 5)| (Alt a 6) (Alt a VI) Length = 113 Score = 76.6 bits (187), Expect = 4e-14 Identities = 38/110 (34%), Positives = 55/110 (50%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLL L GN SPSA D+ ++LESVG E D+++++ ++ +++GKDI EL+A+G EK Sbjct: 4 LAAYLLLGLGGNTSPSAADVKAVLESVGIEADSDRLDKLISELEGKDINELIASGSEKLA 63 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 64 SVPSGGAGGAAASGGAAAAGGSAQAEAAPEAAKEEEKEESDEDMGFGLFD 113
>RLA2B_ARATH (P51407) 60S acidic ribosomal protein P2-B| Length = 115 Score = 74.3 bits (181), Expect = 2e-13 Identities = 43/112 (38%), Positives = 56/112 (50%), Gaps = 2/112 (1%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AA+LLA LSG ASP+ D+ IL SVG E ++ ++EL+L +VKGKD+ EL+AAGREK Sbjct: 4 VAAFLLAVLSGKASPTTGDIKDILGSVGAETEDSQIELLLKEVKGKDLAELIAAGREKLA 63 Query: 186 X--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGFSLF+ Sbjct: 64 SVPSGGGGGVAVASATSGGGGGGGAPAAESKKEEKKEEKEESDDDMGFSLFE 115
>RLA4_CLAHE (P42039) 60S acidic ribosomal protein P2 (Minor allergen Cla h 4)| (Cla h IV) Length = 111 Score = 72.4 bits (176), Expect = 7e-13 Identities = 38/111 (34%), Positives = 56/111 (50%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AA+LL L+GN+SPSAED+ ++L SVG + D E++ +L +++GKDI EL+++G EK Sbjct: 3 YLAAFLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSEKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 --ASVPSGGAGAASAGGAAAAGGAAEAAPEAERAEEEKEESDDDMGFGLFD 111
>RLA3_CLAHE (P42038) 60S acidic ribosomal protein P2 (Allergen Cla h 3) (Cla h| III) Length = 111 Score = 72.0 bits (175), Expect = 9e-13 Identities = 38/111 (34%), Positives = 56/111 (50%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL L+GN+SPSAED+ ++L SVG + D E++ +L +++GKDI EL+++G +K Sbjct: 3 YMAAYLLLGLAGNSSPSAEDIKTVLSSVGIDADEERLSSLLKELEGKDINELISSGSQKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 --ASVPSGGSGAAPSAGGAAAAGGATEAAPEAAKEEEKEESDDDMGFGLFD 111
>RLA2_BRAFL (O01725) 60S acidic ribosomal protein P2| Length = 116 Score = 70.5 bits (171), Expect = 3e-12 Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 3/114 (2%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLLA L GNA+PSA D+ IL SVG + ++E++ ++ ++KGKDI E++AAGR K Sbjct: 3 YVAAYLLAVLGGNANPSAGDIKKILGSVGIDAEDERLNKVIGELKGKDIEEVMAAGRGKL 62 Query: 183 X---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 SSMPSGGGVAAAAGGGGAAAGGGGAAPAAEEKKEEKKEESEEESDDDMGFGLFD 116
>RLA4_CANAL (Q9HFQ4) 60S acidic ribosomal protein P2-B (CaRP2B)| Length = 111 Score = 69.3 bits (168), Expect = 6e-12 Identities = 37/111 (33%), Positives = 51/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL GN SPSA D+T++LESVG E + +++ +L ++GKD+ EL+A G K Sbjct: 3 YLAAYLLLVQGGNTSPSASDITALLESVGVEAEESRLQALLKDLEGKDLQELIAEGNTKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 --ASVPSGGAAAGGASASTGAAAGGAAEAEEEKEEEAKEESDDDMGFGLFD 111
>RLA2_SCHPO (P08094) 60S acidic ribosomal protein P2-alpha (A2) (L40C) (L12EI)| Length = 110 Score = 68.9 bits (167), Expect = 8e-12 Identities = 37/111 (33%), Positives = 53/111 (47%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL + G SPSA D+ S+L +VG E ++E++E ++ ++ GKDI EL+AAG EK Sbjct: 3 YLAAYLLLTVGGKDSPSASDIESVLSTVGIEAESERIETLINELNGKDIDELIAAGNEKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 63 ---ATVPTGGAASAAPAAAAGGAAPAAEEAAKEEAKEEEESDEDMGFGLFD 110
>RLA2_PODAN (Q9C3Z5) 60S acidic ribosomal protein P2| Length = 111 Score = 68.6 bits (166), Expect = 1e-11 Identities = 36/110 (32%), Positives = 53/110 (48%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLL L G A+PSA D+ ++LESVG E D+++++ ++ +++GKD+ EL+A G K Sbjct: 4 LAAYLLLTLGGKATPSAADVKAVLESVGIEADSDRLDKLISELEGKDVNELIAEGSSKL- 62 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 -ASVPSGGAGGAAAAGGAAAAGGAAEAAPEEAKEEEKEESDDDMGFGLFD 111
>RLA4_SCHPO (P17478) 60S acidic ribosomal protein P2-beta (A4)| Length = 110 Score = 67.4 bits (163), Expect = 2e-11 Identities = 36/111 (32%), Positives = 52/111 (46%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL + G SPSA D+ S+L +VG E + E++E ++ ++ GK+I EL+AAG EK Sbjct: 3 YLAAYLLLTVGGKQSPSASDIESVLSTVGIEAEAERVESLISELNGKNIEELIAAGNEKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 63 ---STVPSAGAVATPAAGGAAGAEATSAAEEAKEEEAAEESDEDMGFGLFD 110
>RLA2_ASPFU (Q9UUZ6) 60S acidic ribosomal protein P2 (Allergen Asp f 8) (AfP2)| Length = 111 Score = 67.0 bits (162), Expect = 3e-11 Identities = 35/110 (31%), Positives = 52/110 (47%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLL L+GN SPS+ED+ ++L SVG + D E++ ++ +++GKD+ EL+A G K Sbjct: 4 LAAYLLLALAGNTSPSSEDVKAVLSSVGIDADEERLNKLIAELEGKDLQELIAEGSTKL- 62 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 63 -ASVPSGGAAAAAPAAAGAAAGGAAAPAAEEKKEEEKEESDEDMGFGLFD 111
>RLA2_DROME (P05389) 60S acidic ribosomal protein P2 (Acidic ribosomal protein| RPA1) Length = 113 Score = 66.6 bits (161), Expect = 4e-11 Identities = 36/111 (32%), Positives = 50/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLLA L G SP+ DL IL SVG E+D E++ ++ ++ GK I +L+ GREK Sbjct: 3 YVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGREKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF+LF+ Sbjct: 63 SSMPVGGGGAVAAADAAPAAAAGGDKKEAKKEEKKEESESEDDDMGFALFE 113
>RLA2_HORSE (Q6X9Z5) 60S acidic ribosomal protein P2| Length = 115 Score = 65.9 bits (159), Expect = 7e-11 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN SPSA+D+ IL+SVG E D+++++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNTSPSAKDIKKILDSVGIEADDDRLDKVISELNGKNIEDVIAQGIGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPAGGAVAVSAAPGSAAPAAGSAPAAAEERKEEKKEESEESDDDMGFGLFD 115
>RLA2_RAT (P02401) 60S acidic ribosomal protein P2| Length = 115 Score = 65.5 bits (158), Expect = 9e-11 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN++PSA+D+ IL+SVG E D+E++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNSNPSAKDIKKILDSVGIEADDERLNKVISELNGKNIEDVIAQGVGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_MOUSE (P99027) 60S acidic ribosomal protein P2| Length = 115 Score = 65.5 bits (158), Expect = 9e-11 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGVGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_HUMAN (P05387) 60S acidic ribosomal protein P2 (NY-REN-44 antigen)| Length = 115 Score = 65.5 bits (158), Expect = 9e-11 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>RLA2_BOVIN (P42899) 60S acidic ribosomal protein P2| Length = 115 Score = 65.1 bits (157), Expect = 1e-10 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN+SPSA+D+ IL+SVG E D++++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELHGKNIEDVIAQGIGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPAGGAVAVSAAPGSAAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>RLA2_ARTSA (P02399) 60S acidic ribosomal protein P2 (EL12)| Length = 111 Score = 63.5 bits (153), Expect = 3e-10 Identities = 36/111 (32%), Positives = 51/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLLA LSGNA PS D+ IL SVG E + +++ ++ ++KGKD+ L+A G+ K Sbjct: 3 YVAAYLLAALSGNADPSTADIEKILSSVGIECNPSQLQKVMNELKGKDLEALIAEGQTKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 63 --ASMPTGGAPAAAAGGAATAPAAEAKEAKKEEKKEESEEEDEDMGFGLFD 111
>RLA2_FUSCU (Q8TFM9) 60S acidic ribosomal protein P2 (Allergen Fus c 1)| Length = 109 Score = 63.5 bits (153), Expect = 3e-10 Identities = 35/110 (31%), Positives = 51/110 (46%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLL L GN SPSA D+ ++L SVG + D +++ ++ +++GKDI +L+A G EK Sbjct: 4 LAAYLLLGLGGNTSPSAADVKAVLTSVGIDADEDRLNKLISELEGKDIQQLIAEGSEKL- 62 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 63 ---ASVPSGGAGGASGGAAAAGGAAEEAKEEEKEEEKEESDEDMGFGLFD 109
>RLA4_YEAST (P02400) 60S acidic ribosomal protein P2-beta (L45) (YL44C) (YPA1)| (L12EIA) Length = 110 Score = 63.5 bits (153), Expect = 3e-10 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 1/112 (0%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGK-DITELLAAGREK 179 ++AAYLL GNA+PSA D+ +++ESVG E+D ++ +L ++GK + E++A G++K Sbjct: 3 YLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQKK 62 Query: 180 FXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 F DDDMGF LFD Sbjct: 63 F----ATVPTGGASSAAAGAAGAAAGGDAAEEEKEEEAKEESDDDMGFGLFD 110
>RLA2_BRUMA (P90703) 60S acidic ribosomal protein P2| Length = 114 Score = 63.2 bits (152), Expect = 4e-10 Identities = 34/111 (30%), Positives = 49/111 (44%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL+ +SGN SPSA+D+ +L SVG ++D E ++ + GK I E++ AG K Sbjct: 4 YLAAYLLSTMSGNKSPSAKDIEDVLGSVGLDVDMEDANKVVSALSGKSIDEVITAGLAKV 63 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 D+DMGF LFD Sbjct: 64 SSVPSDAAVSAIAPVVSATPTDALQAGSKKGETKEGPKEESDEDMGFGLFD 114
>RLA2_CRYST (O61463) 60S acidic ribosomal protein P2| Length = 110 Score = 62.4 bits (150), Expect = 7e-10 Identities = 34/111 (30%), Positives = 52/111 (46%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY+LA L GN PS DL IL+SVG E++ +++ ++ ++KGK++ E++A G +K Sbjct: 3 YVAAYMLATLGGNEKPSESDLKKILDSVGIEVEKDQLTKVINELKGKNLDEVIAEGEKKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ---ASVPSGGGVAAAAPAAGGGGADPAEAKEEKKEEPEEESDDDMGFGLFD 110
>RLA2_PIG (Q29315) 60S acidic ribosomal protein P2| Length = 115 Score = 62.0 bits (149), Expect = 9e-10 Identities = 36/113 (31%), Positives = 53/113 (46%), Gaps = 2/113 (1%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++A+YLLA L GN SPSA+D+ L+SVG E D +++ ++ ++ GK+I +++A G K Sbjct: 3 YVASYLLAALGGNTSPSAKDIKKXLDSVGIEADXDRLNKVISELNGKNIEDVIAQGIGKL 62 Query: 183 XX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ASVPSGGAXAVAAAPGSXAPAAGSAPAAAEEKKEEKKEESEESDDDMGFGLFD 115
>RLA2_CANAL (Q9HFQ5) 60S acidic ribosomal protein P2-A (CaRP2A)| Length = 108 Score = 62.0 bits (149), Expect = 9e-10 Identities = 33/111 (29%), Positives = 50/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL +GNA+PSA D+ ++L + E++ EK+E ++ + GK++ EL+A G EK Sbjct: 3 YLAAYLLLVNAGNATPSAADVKAVLSAADIEVEEEKVEKLISESDGKNVEELIAEGNEKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDM F LFD Sbjct: 63 -----SSVPSGAPAAAAGGASAAAGGEATEEAAEEEAAEESDDDMSFGLFD 108
>RLA2_RHOGU (Q96UQ7) 60S acidic ribosomal protein P2 (Acyl carrier protein)| Length = 110 Score = 61.2 bits (147), Expect = 2e-09 Identities = 32/110 (29%), Positives = 50/110 (45%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFX 185 +AAYLL +GN SPSAED+ +L + + D E++ +++ +++GKD+ E++A G +K Sbjct: 4 VAAYLLLVSAGNTSPSAEDVKKVLAAADIQADEERLSVLIKELEGKDVNEVIAEGSKKL- 62 Query: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 --ASVPSGGAAPAAAAGGAAAGGAAEEKAEDKPAEKDEESDDDMGFGLFD 110
>RLA2_DICDI (P22683) 60S acidic ribosomal protein P2| Length = 105 Score = 60.5 bits (145), Expect = 3e-09 Identities = 37/111 (33%), Positives = 51/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLLA LSGNA+ A +T IL+SVG E+D ++E + ++ GKD+ L+AAG+ K Sbjct: 2 YLAAYLLASLSGNAN--AASVTKILQSVGVEVDAARVESVCKELDGKDVQALIAAGKSK- 58 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMG LFD Sbjct: 59 ----VGSVAAAAAPAAATSAAPAAAAAAPAKKVVEEKKEESDDDMGMGLFD 105
>RLA2_CAEEL (O01504) 60S acidic ribosomal protein P2| Length = 107 Score = 60.1 bits (144), Expect = 4e-09 Identities = 36/111 (32%), Positives = 50/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++ AYLLA L GNASPSA+D+ +LE+ G + D E ++ +KGK I+E++A G+ K Sbjct: 3 YLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 63 ------SSVPSGGSAPAAAAPSGGAAPKAEEKKKEEPKEESDDDMGFGLFD 107
>RLA2_YEAST (P05319) 60S acidic ribosomal protein P2-alpha (A2) (L44) (L12EIB)| Length = 106 Score = 59.7 bits (143), Expect = 5e-09 Identities = 36/111 (32%), Positives = 50/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYLL +GN +P A + +ILESVG EI++EK+ +L ++GK + EL+ G EK Sbjct: 3 YLAAYLLLNAAGN-TPDATKIKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNEKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 ------AAVPAAGPASAGGAAAASGDAAAEEEKEEEAAEESDDDMGFGLFD 106
>RLA2_EUPRA (Q9GPU2) 60S acidic ribosomal protein P2| Length = 113 Score = 58.5 bits (140), Expect = 1e-08 Identities = 26/59 (44%), Positives = 42/59 (71%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 179 +IAAY L L GN+SPSA+D+ +L+SVG + + +K++ +L ++GK + EL+ AG K Sbjct: 3 YIAAYALLVLGGNSSPSADDVKKVLKSVGVDSEQDKLDALLKNLEGKQLHELIEAGSSK 61
>RLA2_BABBO (P27055) 60S acidic ribosomal protein P2 (L12EI)| Length = 112 Score = 57.4 bits (137), Expect = 2e-08 Identities = 32/111 (28%), Positives = 51/111 (45%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++++YLLA +GN +PS +DL IL++VG ++D E ++ ++ + GK + E +AAG K Sbjct: 5 YVSSYLLAVAAGNENPSVDDLKKILDAVGSDVDEECLQGLVDSMSGKTVHETIAAGMTKL 64 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 +DDMGFSLFD Sbjct: 65 ---QSMPAGGAAMPAAAAGGAPAAAEDKAEAKKPEAEPEEEEDDMGFSLFD 112
>RLA2_EIMTE (Q967Y9) 60S acidic ribosomal protein P2| Length = 114 Score = 55.8 bits (133), Expect = 7e-08 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 1/112 (0%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAYL+ L GN +P+A D++ +LE VG E++ E ++ ++ ++GK E+++AG EK Sbjct: 3 YVAAYLMTVLGGNEAPTAADVSRVLEPVGAEVNPEVLKTLIDAMQGKAAHEVISAGLEKL 62 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDD-DMGFSLFD 335 +D DMG SLFD Sbjct: 63 QKVPCGGGAAAAAPAAAAAAGGGDSSSAAKETKKEEPEEEEEDGDMGLSLFD 114
>RLA2_TAESO (P50879) 60S acidic ribosomal protein P2| Length = 121 Score = 54.7 bits (130), Expect = 2e-07 Identities = 25/59 (42%), Positives = 39/59 (66%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 179 ++AAYLLA L G P D+ +IL SVG E + E+ +L + Q+ GK++ +L+ G+EK Sbjct: 3 YLAAYLLAQLGGTGRPQESDIKNILSSVGVECEQERAKLGVDQLHGKNVRDLINTGKEK 61
>RLA2_TRYBB (P51408) 60S acidic ribosomal protein P2| Length = 107 Score = 54.3 bits (129), Expect = 2e-07 Identities = 32/111 (28%), Positives = 48/111 (43%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY L LSG +PS D+ ++L++ G +D+ ++E +L +V+GKD L A G+ K Sbjct: 3 YLAAYALISLSGK-TPSKADVEAVLKAAGVPVDSSRVEELLSEVEGKDFDALCAEGKAKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 -----VGGVTAGGAAPSGGAAAHAAAASAPAAAAAEAEEEDDDDMGFGLFD 107
>RLA2_WHEAT (P05390) 60S acidic ribosomal protein P2 (Ribosomal protein 'A')| (Fragment) Length = 42 Score = 51.6 bits (122), Expect = 1e-06 Identities = 24/39 (61%), Positives = 30/39 (76%) Frame = +3 Query: 6 IAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELM 122 IAAYLLAYL GN+SPSA D+ IL +VG E + EK+E + Sbjct: 4 IAAYLLAYLGGNSSPSAADVKDILNAVGAEANEEKLEFL 42
>RLA3_LEIIN (Q06382) 60S acidic ribosomal protein P2-2| Length = 111 Score = 48.9 bits (115), Expect = 8e-06 Identities = 31/111 (27%), Positives = 45/111 (40%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY LA LS ASPS D+ +I ++V ++D + ++ V G+D+ L+A G K Sbjct: 5 YLAAYALASLS-KASPSQADVEAICKAVHIDVDQATLAFVMESVTGRDVATLIAEGAAKM 63 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 64 ---SAMPAASSGAAAGVTASAAGDAAPAAAAAKKDEPEEEADDDMGFGLFD 111
>RLA2_RABIT (P19943) 60S acidic ribosomal protein P2 (Acidic phosphoprotein P3)| (Fragment) Length = 44 Score = 48.1 bits (113), Expect = 1e-05 Identities = 20/41 (48%), Positives = 33/41 (80%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELML 125 ++A+YLLA L GN+SPSA+D+ IL+SVG E D++++ ++ Sbjct: 3 YVASYLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVI 43
>RLA2_LEIBR (O44010) 60S acidic ribosomal protein P2 (Acidic ribosomal P2 beta| protein) (P2B-protein) Length = 105 Score = 48.1 bits (113), Expect = 1e-05 Identities = 28/111 (25%), Positives = 45/111 (40%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY L LSG +P D+ ++L++ G I+ +++ + +++GK EL+ GR K Sbjct: 3 YLAAYALVALSGK-TPCKADVQAVLKAAGVAIELSRVDALFQELEGKSFDELMTEGRSKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 VGSGSAAPAAAASTAGAAVAAAADAKKEASEEEA-------DDDMGFGLFD 105
>RLA2_LEIIN (Q06383) 60S acidic ribosomal protein P2-1| Length = 106 Score = 48.1 bits (113), Expect = 1e-05 Identities = 30/111 (27%), Positives = 46/111 (41%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY L LSG +PS D+ ++L++ G +D +++ + +V+GK L+A GR K Sbjct: 3 YLAAYALVALSGK-TPSKADVQAVLKAAGVAVDASRVDAVFQEVEGKSFDALVAEGRTKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 ------VGSGSAAPAGAVSTAGAGAGAVAEAKKEEPEEEEADDDMGFGLFD 106
>RLA2_PLAFA (O00806) 60S acidic ribosomal protein P2| Length = 112 Score = 46.6 bits (109), Expect = 4e-05 Identities = 19/59 (32%), Positives = 38/59 (64%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREK 179 ++AAYL+ L GN +PS +++ ++L +V ++++E + + +KGK EL+ G +K Sbjct: 5 YVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLKK 63
>RLA2_LEIDO (O43940) 60S acidic ribosomal protein P2 (Acidic ribosomal protein| 1) Length = 105 Score = 45.4 bits (106), Expect = 9e-05 Identities = 28/111 (25%), Positives = 45/111 (40%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY L LSG +PS + ++L++ G +D +++ + +++GK L+A GR K Sbjct: 3 YLAAYALVALSGK-TPSKAAVEAVLKAAGVAVDASRVDAVFQELEGKSFDALVAEGRAKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 -------VGSGSAAPAAAASTAAAAAAVVAEAKKEEPEEEADDDMGFGLFD 105
>RLA3_TRYCR (P26795) 60S acidic ribosomal protein P2-B (P2B)| Length = 112 Score = 44.7 bits (104), Expect = 2e-04 Identities = 26/111 (23%), Positives = 45/111 (40%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY LA L+ +P A D+ +I ++ G E++++ + ++ + G+ + L+A G K Sbjct: 5 YLAAYALASLN-KPTPGAADVEAICKACGIEVESDALSFVMESIAGRSVATLVAEGAAKM 63 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 64 SAVAVSAAPAAGDAAAPAAAAGGAAAPAAADAKKEEEEE--DDDMGFGLFD 112
>RLA2_TRYCR (P23632) 60S acidic ribosomal protein P2-A (P) (P-JL5) (L12E)| Length = 107 Score = 44.3 bits (103), Expect = 2e-04 Identities = 26/111 (23%), Positives = 42/111 (37%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKF 182 ++AAY L LSG +PS + ++L++ G +D +++ + + GKD + G+ K Sbjct: 3 YLAAYALVGLSGG-TPSKSAVEAVLKAAGVPVDPSRVDALFAEFAGKDFDTVCTEGKSKL 61 Query: 183 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 62 -----VGGVTRPNAATASAPTAAAAASSGAAAPAAAAEEEEDDDMGFGLFD 107
>VID21_NEUCR (Q7SBU6) Chromatin modification-related protein vid-21| Length = 2189 Score = 33.5 bits (75), Expect = 0.36 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%) Frame = -1 Query: 204 HHQMEPQQTSPCQQPRAR*CPCPSLGTA*VP--SSHCQFHNQQTQEWMSGPLQRGWRCQR 31 H Q +PQQ QQ R + P P L A P S Q + QTQ+ P + + Q Sbjct: 1929 HQQQQPQQAQQTQQQRQQVHPAPQLPQAQPPQHSHQAQAQHPQTQQ-AQAPQAQAQQPQP 1987 Query: 30 GKQADRQQ 7 +QA QQ Sbjct: 1988 PQQAQAQQ 1995
>RL12_METTH (P05394) 50S ribosomal protein L12P ('A' type)| Length = 101 Score = 30.8 bits (68), Expect = 2.3 Identities = 14/53 (26%), Positives = 33/53 (62%) Frame = +3 Query: 3 FIAAYLLAYLSGNASPSAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELL 161 +I A +L + +G + E++ S+LE+ G E+D+ +++ ++ ++ DI E + Sbjct: 3 YIYAAMLLHTTGKEI-NEENVKSVLEAAGAEVDDARVKALIAALEDVDIEEAM 54
>HLX1_HUMAN (Q14774) Homeobox protein HLX1 (Homeobox protein HB24)| Length = 488 Score = 30.8 bits (68), Expect = 2.3 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%) Frame = -1 Query: 207 HHH------QMEPQQTSPCQQPRAR*CPCPSLGTA*VPSSH 103 HHH Q +PQQ P PRA P+ GT VP+ H Sbjct: 121 HHHPQQQQQQQQPQQQQPPPPPRAGALQPPASGTRVVPNPH 161
>RLA3_CANAL (Q9HFQ6) 60S acidic ribosomal protein P1-B (CaRP1B)| Length = 108 Score = 30.8 bits (68), Expect = 2.3 Identities = 20/95 (21%), Positives = 31/95 (32%) Frame = +3 Query: 51 SAEDLTSILESVGCEIDNEKMELMLCQVKGKDITELLAAGREKFXXXXXXXXXXXXXXXX 230 ++E L +I ++ G +D ++ V+GK++ ELL Sbjct: 22 TSEKLLAITKAAGANVDQVWADVFAKAVEGKNLKELL--------FSFAAAAPASGAAAG 73 Query: 231 XXXXXXXXXXXXXXXXXXXXXXXXXDDDMGFSLFD 335 DDDMGF LFD Sbjct: 74 SASGAAAGGEAAAEEAAEEEAAEESDDDMGFGLFD 108
>CSF1_YEAST (Q12150) Protein CSF1 (Cold sensitive for fermentation protein 1)| Length = 2958 Score = 30.8 bits (68), Expect = 2.3 Identities = 18/64 (28%), Positives = 30/64 (46%) Frame = -2 Query: 206 TTTRWNRSKLLPASSQELGDVLALHLAQHEFHLLIVNFTTNRLKNGCQVLCRGAGVAREV 27 T + W+ + +LP + +ALH A+ L+V+F + + G + R V Sbjct: 846 TFSVWDGALILPETIYSFDPCIALHFAE-----LVVDFRSCNYYMDIMAVLNGTSIKRHV 900 Query: 26 SKQI 15 SKQI Sbjct: 901 SKQI 904
>YHZ3_SCHPO (P40923) Putative homeobox protein C21B10.13c in chromosome II| Length = 201 Score = 29.3 bits (64), Expect = 6.8 Identities = 13/39 (33%), Positives = 25/39 (64%) Frame = -1 Query: 501 KVWFTSKSTSNQRLNYISKHCLASVSQLS*IKAKTSLTL 385 ++WF +K S +R N +S++ L + S ++ K++LTL Sbjct: 80 QIWFQNKRQSLRRSNCLSRNRLEGTGENSLLRRKSTLTL 118
>CAC1D_RAT (P27732) Voltage-dependent L-type calcium channel alpha-1D subunit| (Voltage-gated calcium channel alpha subunit Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2) (RAT brain class D) (RBD) Length = 2203 Score = 28.9 bits (63), Expect = 8.9 Identities = 7/10 (70%), Positives = 9/10 (90%) Frame = +2 Query: 182 CCGSIWWWWR 211 CCGS+W WW+ Sbjct: 488 CCGSLWCWWK 497 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,146,693 Number of Sequences: 219361 Number of extensions: 1003617 Number of successful extensions: 2707 Number of sequences better than 10.0: 52 Number of HSP's better than 10.0 without gapping: 2616 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2671 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)