ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8n10 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 231 bits (590), Expect = 9e-61 Identities = 107/128 (83%), Positives = 117/128 (91%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G++VDVKVNGA+HKGMPHKFYHGRTGR+WNVTKRA+GVE+NKQ+GNRII+KRIHVRVEHV Sbjct: 37 GDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHVRVEHV 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDV 362 Q SRC EEF RK ND+LKA AKA GE ISTKRQP GPKPGFMVEG T+ETVTPIPYDV Sbjct: 97 QQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGPKPGFMVEGMTLETVTPIPYDV 156 Query: 363 VNDLKGGY 386 VNDLKGGY Sbjct: 157 VNDLKGGY 164
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 140 bits (354), Expect = 2e-33 Identities = 74/122 (60%), Positives = 90/122 (73%), Gaps = 3/122 (2%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 GE+VDV N AVHKGMP K+YHGRTG VWNVTKRAIGVEINK+V +RIIKKRIHVR++HV Sbjct: 37 GEYVDVVGNAAVHKGMPFKYYHGRTGIVWNVTKRAIGVEINKRVRHRIIKKRIHVRIDHV 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAK-ARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIP 353 + S C + FL+R NDK+K +A A+ V STKR P PK G ++ +G ET IP Sbjct: 97 KKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVLPKAGAIIKSKGQVPETCHAIP 156 Query: 354 YD 359 Y+ Sbjct: 157 YE 158
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 137 bits (344), Expect = 3e-32 Identities = 63/121 (52%), Positives = 90/121 (74%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH+ Sbjct: 37 GDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHI 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+C +EFL+R N +AEAKA+G + KRQPA P+ +V EG +T+ P+PY Sbjct: 97 KHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPY 156 Query: 357 D 359 + Sbjct: 157 E 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 137 bits (344), Expect = 3e-32 Identities = 63/121 (52%), Positives = 90/121 (74%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K NG++ KGMPHKFY G+TG V+NVTK ++GV INK VGNR ++KR+++RVEH+ Sbjct: 37 GDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHI 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+C +EFL+R N +AEAKA+G + KRQPA P+ +V EG +T+ P+PY Sbjct: 97 KHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPY 156 Query: 357 D 359 + Sbjct: 157 E 157
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 129 bits (325), Expect = 5e-30 Identities = 62/121 (51%), Positives = 86/121 (71%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV Sbjct: 37 GDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHV 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPY 356 + S+C ++FL R N+ + EAKA+G+ + +RQPA P V E VT P+ Y Sbjct: 97 KHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPATAHFVSTENNEPVTLHPVAY 156 Query: 357 D 359 D Sbjct: 157 D 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 129 bits (325), Expect = 5e-30 Identities = 62/121 (51%), Positives = 86/121 (71%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+KVNGAV KGMPHK+YHG+TG V+NVT+ ++GV I K VGNR ++KR++VR+EHV Sbjct: 37 GDIVDIKVNGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHV 96 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVT--PIPY 356 + S+C ++FL R N+ + EAKA+G+ + +RQPA P V E VT P+ Y Sbjct: 97 KHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPPAKAHFVSTENNEPVTLHPVAY 156 Query: 357 D 359 D Sbjct: 157 D 157
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 125 bits (314), Expect = 9e-29 Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ Sbjct: 36 GDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHI 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+ + FL+R ND+ K EAK +G + KRQPA P+ V G E + PIPY Sbjct: 96 KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPY 155 Query: 357 D 359 + Sbjct: 156 E 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 125 bits (314), Expect = 9e-29 Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ Sbjct: 36 GDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHI 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+ + FL+R ND+ K EAK +G + KRQPA P+ V G E + PIPY Sbjct: 96 KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPPREAHFVRTNGKEPELLEPIPY 155 Query: 357 D 359 + Sbjct: 156 E 156
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 120 bits (301), Expect = 3e-27 Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ Sbjct: 36 GDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHI 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+ + FL+R ND+ K EAK +G + QPA P+ V G E + PIPY Sbjct: 96 KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPPREAHFVRTNGKEPELLEPIPY 155 Query: 357 D 359 + Sbjct: 156 E 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 120 bits (300), Expect = 4e-27 Identities = 58/121 (47%), Positives = 81/121 (66%), Gaps = 2/121 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K G V KGMPHK YHG+TGRV+NVT+ A+G+ +NKQV +I+ KRI+VR+EH+ Sbjct: 36 GDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHI 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMV--EGTTIETVTPIPY 356 + S+ + FL+R ND+ K EAK +G + KR A P+ V G E + PIPY Sbjct: 96 KHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPPREAHFVRTNGKEPELLEPIPY 155 Query: 357 D 359 + Sbjct: 156 E 156
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 115 bits (287), Expect = 1e-25 Identities = 54/124 (43%), Positives = 84/124 (67%), Gaps = 3/124 (2%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K NGA KGMP K YHGRTGR++NVT+ A+G+ +NK+V I+ KRI++R+EH+ Sbjct: 36 GDLVDIKTNGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHI 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGE-VISTKRQPAGPKPGFMV--EGTTIETVTPIP 353 +PS+C +FL R +ND+ + AK+ G+ V + KR P P+ V + E + P+ Sbjct: 96 KPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVAPRGAHTVTTQNNEPELLAPLR 155 Query: 354 YDVV 365 +++V Sbjct: 156 FEIV 159
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 114 bits (286), Expect = 2e-25 Identities = 55/120 (45%), Positives = 82/120 (68%), Gaps = 1/120 (0%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+K +G+V K PHK YHG+TGR++NVT+ A+G+ +NKQV RII KRI+VR+EH+ Sbjct: 35 GDIVDIKGDGSVQKVCPHKVYHGKTGRIFNVTQHAVGIIVNKQVRGRIIAKRINVRIEHI 94 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTT-IETVTPIPYD 359 + S+ F+QR N++ + EA+ + ++ KRQP P+ G V + E V PIPY+ Sbjct: 95 KHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQPRTGHFVRSSAEPELVEPIPYE 154
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 107 bits (266), Expect = 3e-23 Identities = 52/128 (40%), Positives = 81/128 (63%), Gaps = 9/128 (7%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G++V + N ++ G+P+K +HG+TGRVWNV AIGV +NK+V NRI+ KR+H+ EH+ Sbjct: 37 GDYVTILCNSSIQHGLPYKAFHGKTGRVWNVNPHAIGVMVNKKVNNRIVVKRLHISPEHI 96 Query: 183 QPSRCNEEFLQRKL-------NNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIE-- 335 +PS C ++FL+RK N +LK E K + KR P P+P +++G I+ Sbjct: 97 RPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPAKRLPKQPRPAELIKGADIKFT 155 Query: 336 TVTPIPYD 359 TV P+ ++ Sbjct: 156 TVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 95.9 bits (237), Expect = 7e-20 Identities = 47/101 (46%), Positives = 74/101 (73%), Gaps = 1/101 (0%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ VD+ VN A+ KGMPHK+YHGRTGRV++V R++ V + K+V + + K+I VR+EHV Sbjct: 36 GDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHV 95 Query: 183 QPSRCNEEFLQRKLNNDKLKAEAKARGEVIS-TKRQPAGPK 302 + SRC+EE +R L ++ +A++RG V++ +KR+ GP+ Sbjct: 96 RKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>RL21_SULAC (Q4JB11) 50S ribosomal protein L21e| Length = 103 Score = 53.5 bits (127), Expect = 4e-07 Identities = 27/62 (43%), Positives = 41/62 (66%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 GE+V VK+N ++HKGMPH+ YHG+ G V V KR E+ +G++ ++ + VR EH+ Sbjct: 39 GEYVVVKINPSIHKGMPHRRYHGKVGLV--VGKRGKAYEVKVNIGDK--ERVLIVRPEHL 94 Query: 183 QP 188 P Sbjct: 95 IP 96
>RL21_SULSO (Q9UXE0) 50S ribosomal protein L21e| Length = 101 Score = 47.0 bits (110), Expect = 4e-05 Identities = 24/62 (38%), Positives = 41/62 (66%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G++V VK+N +VH+GMPH+ Y G+ G++ + KR ++ +G++ +K I VR EH+ Sbjct: 39 GDNVVVKINPSVHQGMPHRRYQGKVGKI--IGKRGRAYLVSVTLGDK--EKVIIVRPEHL 94 Query: 183 QP 188 P Sbjct: 95 VP 96
>RL21_SULTO (Q975F2) 50S ribosomal protein L21e| Length = 103 Score = 46.2 bits (108), Expect = 7e-05 Identities = 24/60 (40%), Positives = 38/60 (63%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G++V +K+N +VHKGMPH+ YHG+ G + KR + +G++ +K I VR EH+ Sbjct: 39 GDYVVIKINPSVHKGMPHRRYHGKVGVIQG--KRGKAYIVRVTLGDK--EKVIIVRPEHL 94
>RL21_METKA (Q8TUU3) 50S ribosomal protein L21e| Length = 102 Score = 46.2 bits (108), Expect = 7e-05 Identities = 26/62 (41%), Positives = 38/62 (61%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + ++ +VHKGMPH YHGRTG V RA V+I G + +K++ V EH+ Sbjct: 38 GQKVHIVIDPSVHKGMPHPRYHGRTGEVVGRQGRAYIVKIRD--GGK--EKKLIVYPEHL 93 Query: 183 QP 188 +P Sbjct: 94 KP 95
>RL21_METJA (P54013) 50S ribosomal protein L21e| Length = 98 Score = 43.5 bits (101), Expect = 4e-04 Identities = 24/63 (38%), Positives = 38/63 (60%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 GE+V + ++ +VHKGMPH +HGRTG V RA V++ G + K+I +H+ Sbjct: 38 GEYVHIVIDPSVHKGMPHPRFHGRTGIVVGKQGRAFIVKVRD--GGKY--KQIIAYPQHL 93 Query: 183 QPS 191 +P+ Sbjct: 94 RPA 96
>RL21_METTH (O27378) 50S ribosomal protein L21e| Length = 96 Score = 41.6 bits (96), Expect = 0.002 Identities = 21/61 (34%), Positives = 38/61 (62%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + ++ ++H+G PH +HG+TGRV + ++ V + GN+ K++ VR EH+ Sbjct: 37 GDLVHIIIDPSIHRGQPHPRFHGKTGRVVGMMGKSYVVALKD--GNK--DKQLVVRPEHL 92 Query: 183 Q 185 Q Sbjct: 93 Q 93
>RL21_PIG (P49666) 60S ribosomal protein L21 (Fragment)| Length = 61 Score = 40.4 bits (93), Expect = 0.004 Identities = 16/26 (61%), Positives = 20/26 (76%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTG 80 G+ VD+K G V KG+PHK YHG+TG Sbjct: 36 GDIVDIKGMGTVQKGLPHKCYHGKTG 61
>RL21_PYRAB (Q9UZP1) 50S ribosomal protein L21e| Length = 97 Score = 39.7 bits (91), Expect = 0.006 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + + + HKGMP +HGRTG V V KR + GN++ K + + H+ Sbjct: 38 GQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHL 93 Query: 183 QPSR 194 +P + Sbjct: 94 RPQK 97
>RL21_PYRHO (O74001) 50S ribosomal protein L21e| Length = 97 Score = 39.3 bits (90), Expect = 0.008 Identities = 21/64 (32%), Positives = 34/64 (53%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + + + HKGMP +HGRTG V V KR + GN++ K + + H+ Sbjct: 38 GQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVEVPDGNKV--KTLFIHPVHL 93 Query: 183 QPSR 194 +P + Sbjct: 94 RPQK 97
>RL21_ARCFU (O28743) 50S ribosomal protein L21e| Length = 97 Score = 38.5 bits (88), Expect = 0.014 Identities = 23/62 (37%), Positives = 34/62 (54%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + + A KGMPH + GRTG V RA V++ G ++ K + VR EH+ Sbjct: 37 GQRVHIDIEPASQKGMPHPRFQGRTGVVIGQRGRAYLVQVRD--GGKM--KTLIVRPEHL 92 Query: 183 QP 188 +P Sbjct: 93 KP 94
>RL21_PYRFU (Q8U217) 50S ribosomal protein L21e| Length = 97 Score = 38.1 bits (87), Expect = 0.019 Identities = 20/64 (31%), Positives = 35/64 (54%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + + + HKGMP +HGRTG V V KR + + G+++ K + + H+ Sbjct: 38 GQRVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGEAYIVEIKDGSKV--KTLFIHPVHL 93 Query: 183 QPSR 194 +P + Sbjct: 94 RPQK 97
>RL21_PYRKO (Q5JI51) 50S ribosomal protein L21e| Length = 98 Score = 35.8 bits (81), Expect = 0.092 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + + + HKGMP +HGRTG V V KR + G ++ K + H+ Sbjct: 38 GQKVHIVIEPSYHKGMPDPRFHGRTGTV--VGKRGDAYIVQITDGGKV--KTFFIHPVHL 93 Query: 183 QPSR 194 +P + Sbjct: 94 RPQK 97
>RL21_METMP (Q6M125) 50S ribosomal protein L21e| Length = 97 Score = 35.8 bits (81), Expect = 0.092 Identities = 22/64 (34%), Positives = 36/64 (56%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V V ++ +V KGMPH +HG+TG V V +R + + G + K I R +H+ Sbjct: 37 GDLVHVVLDPSVQKGMPHPKFHGKTGVV--VAQRGSSFLVRVKDGGKY--KDIIARPQHL 92 Query: 183 QPSR 194 + S+ Sbjct: 93 RESK 96
>RL21_METAC (Q8TQU3) 50S ribosomal protein L21e| Length = 97 Score = 33.1 bits (74), Expect = 0.60 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + ++ +V KGMP+ + G TG+V R+ +E+ GN + K + +H+ Sbjct: 37 GQMVHIDIDPSVQKGMPNPKFQGSTGKVIGQRGRSYVLEVRS--GNAM--KEVFSLPQHL 92 Query: 183 QPSR 194 +P + Sbjct: 93 KPQK 96
>RL21_AERPE (P58077) 50S ribosomal protein L21e| Length = 107 Score = 32.7 bits (73), Expect = 0.78 Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Frame = +3 Query: 3 GEHVDVKVNGAVHK-GMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEH 179 G+ V + +N + GMPH+ +HG TG V V KR E+ +G + +K + V H Sbjct: 39 GDKVAIIINPSFPDWGMPHRRFHGLTGTV--VGKRGEAYEVEVYLGRK--RKTLFVPPVH 94 Query: 180 VQP 188 ++P Sbjct: 95 LKP 97
>PACC_KLULA (Q6CQ07) pH-response transcription factor pacC/RIM101| Length = 517 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = +3 Query: 156 RIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKP 305 R+HV+++ S CN++F + + LK K E +S ++ GPKP Sbjct: 169 RVHVQLKPFACSTCNKKFKRPQ----DLKKHLKVHNEELSLLKKKRGPKP 214
>RL21_METMA (Q8PU21) 50S ribosomal protein L21e| Length = 97 Score = 29.6 bits (65), Expect = 6.6 Identities = 17/64 (26%), Positives = 35/64 (54%) Frame = +3 Query: 3 GEHVDVKVNGAVHKGMPHKFYHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHV 182 G+ V + ++ +V KGMP+ + G TG+V + +R + + GN + K + +H+ Sbjct: 37 GQMVHIDIDPSVQKGMPNPKFQGFTGKV--IGQRGRSYILAVREGNSM--KEVFSVPQHL 92 Query: 183 QPSR 194 +P + Sbjct: 93 KPQK 96
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 29.6 bits (65), Expect = 6.6 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +3 Query: 138 NRIIKKRIHVRVEHVQPSRCNEEFLQR 218 NRI +RIH+ +H Q ++C E F +R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 29.3 bits (64), Expect = 8.6 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = -2 Query: 290 WLPLCADDLTTGLGLRLQLVIVEFPLEELLIAPGWLHV 177 WLP+ +D+ + GLR L+ PL + WL V Sbjct: 223 WLPIMKEDIESSPGLRKALIYAYGPLRTWMSIAHWLKV 260
>TBB_BOMMO (P41385) Tubulin beta chain (Beta tubulin)| Length = 450 Score = 29.3 bits (64), Expect = 8.6 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = -2 Query: 377 LEIVDDIVR---DGCDCLNGGALHHEPGLG 297 LE V D+VR +GCDCL G L H G G Sbjct: 113 LETVLDVVRKEAEGCDCLQGFQLVHSLGGG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,773,231 Number of Sequences: 219361 Number of extensions: 1258638 Number of successful extensions: 4351 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4239 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4350 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
