ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags8n10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF475114.1| Triticum aestivum 60s ribosomal protein L21 mRNA, partial cds Length = 519 Score = 648 bits (327), Expect = 0.0 Identities = 373/389 (95%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131 tcggggagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 190 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 250 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 |||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||| Sbjct: 251 tcaacaagcaggtcggcaacaggatcatcaagaagaggatccatgtgcgtgtggagcacg 310 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 311 tgcagccatccaggtgcaacgaggagttcctccagaggaaactcaacaatgacaagctga 370 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 | |||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 371 angcggaggccaaggcgcgtggcgaggtcatcagcacgaagaggcagccagcagggccca 430 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 |||| |||||||||||||||||||||||||| ||||| ||||| |||||||||||||| | Sbjct: 431 agcctgggttcatggtggagggcaccaccatcgagacggtcacccccatcccgtacgacg 490 Query: 361 tcgtcaacgatctcaagggtggttactag 389 |||||||||||||||| |||||||||||| Sbjct: 491 tcgtcaacgatctcaanggtggttactag 519
>ref|NM_196917.1| Oryza sativa (japonica cultivar-group) 60S ribosomal protein L21 (OSJNBa0006L06.3), mRNA Length = 783 Score = 456 bits (230), Expect = e-125 Identities = 352/390 (90%), Gaps = 2/390 (0%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 184 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagt 243 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 303 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||||||||| || ||||| || |||| ||||||||||||||||||||| ||||| | Sbjct: 304 tcaacaagcaggttgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatg 363 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 |||||||||||||||||| ||||||||||| || |||||| |||| || ||| |||| | Sbjct: 364 tgcagccatccaggtgcactgaggagttccgcctgaggaagatcaagaacgaccagctca 423 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcaggg-ccc 299 |||| || |||||||| |||||||||||||||||||| ||||||||||| |||||| || Sbjct: 424 aggcagatgccaaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcct 482 Query: 300 aagcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgat 359 |||||||| |||||||| ||||| | || | ||||| ||||| ||||||||||||||| Sbjct: 483 aagcccggcttcatggttgagggtgcaacactggagactgtcacccccatcccgtacgat 542 Query: 360 gtcgtcaacgatctcaagggtggttactag 389 || ||||| ||||||||||||||||||||| Sbjct: 543 gtggtcaatgatctcaagggtggttactag 572
>gb|AF093630.1|AF093630 Oryza sativa 60S ribosomal protein L21 (RPL21) mRNA, complete cds Length = 753 Score = 448 bits (226), Expect = e-123 Identities = 351/390 (90%), Gaps = 2/390 (0%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 123 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagt 182 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 242 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||||||||| || ||||| || |||| ||||||||||||||||||||| ||||| | Sbjct: 243 tcaacaagcaggttgggaaccgcattatcaggaagaggatccatgtccgtgtggagcatg 302 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 |||||||||||||||||| ||||||||||| || |||||| |||| || ||| |||| | Sbjct: 303 tgcagccatccaggtgcactgaggagttccgcctgaggaagatcaagaacgaccagctca 362 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcaggg-ccc 299 |||| || |||||||| |||||||||||||||||||| ||||||||||| |||||| || Sbjct: 363 aggcagatgccaaggctcgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcct 421 Query: 300 aagcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgat 359 ||||| || |||||||| ||||| | || | ||||| ||||| ||||||||||||||| Sbjct: 422 aagcctggcttcatggttgagggtgcaacactggagactgtcacccccatcccgtacgat 481 Query: 360 gtcgtcaacgatctcaagggtggttactag 389 || ||||| ||||||||||||||||||||| Sbjct: 482 gtggtcaatgatctcaagggtggttactag 511
>gb|AY105020.1| Zea mays PCO098402 mRNA sequence Length = 784 Score = 331 bits (167), Expect = 2e-87 Identities = 335/391 (85%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 206 tcggcgactacgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagt 265 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 266 tctaccacggccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 325 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||||||||| ||| ||||||| |||| ||||||||||||| || ||||| | Sbjct: 326 tcaacaagcaggttaatggccgcatcatcaggaagcggatccatgtccgcgtggagcatg 385 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 ||||||| ||| | |||| |||||||||| || ||||||| ||| |||||| |||| | Sbjct: 386 tgcagccctcccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctca 445 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 ||||||| ||||||||||| |||||||| |||||||| ||||||||||| | || |||| Sbjct: 446 aggcggatgccaaggcccgcggtgaggtgatcagcaccaagaggcagcctgtgggaccca 505 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| ||||| | || | ||||||||||| || || || || |||| Sbjct: 506 aacctggcttcatggttgagggtgctacactcgagacagtcactcctattccttatgatg 565 Query: 361 tcgtcaacgatctcaagggtggttactagag 391 | ||||||||||||||||| ||||||||||| Sbjct: 566 tggtcaacgatctcaagggcggttactagag 596
>gb|BT016206.1| Zea mays clone Contig39 mRNA sequence Length = 748 Score = 323 bits (163), Expect = 4e-85 Identities = 334/391 (85%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 170 tcggcgactacgtcgacgtcaaggttaacggcgccgtgcacaagggcatgccgcacaagt 229 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 230 tctaccacggccgcaccgggagcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 289 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||||||||| ||| ||||||| |||| |||||||||||||||| ||||| | Sbjct: 290 tcaacaagcaggttaatggccgcatcatcaggaagcggatccatgtccgtgtggagcatg 349 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 ||||||| ||| | |||| |||||||||| || ||||||| ||| |||||| |||| | Sbjct: 350 tgcagccctcccgttgcacagaggagttccgcctgaggaaagccaagaatgaccagctca 409 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 ||||||| |||||| ||| |||||||| |||||||| ||||||||||| | || |||| Sbjct: 410 aggcggatgccaagctccgcggtgaggtgatcagcaccaagaggcagcccgtgggaccca 469 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| ||||| | || | ||||||||||| || || || || |||| Sbjct: 470 aacctggcttcatggttgagggtgctacactcgagacagtcactcctattccttatgatg 529 Query: 361 tcgtcaacgatctcaagggtggttactagag 391 | ||||||||||||||||| ||||||||||| Sbjct: 530 tggtcaacgatctcaagggcggttactagag 560
>gb|AY107603.1| Zea mays PCO098394 mRNA sequence Length = 965 Score = 268 bits (135), Expect = 2e-68 Identities = 327/391 (83%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 224 tcggcgactacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 283 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| Sbjct: 284 tctaccacggccgcaccggtcgcgtctggaacgtcaccaagcgcgccatcggcgttgaga 343 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||||||||| ||| ||||||| |||| | |||||||||||||| ||||| | Sbjct: 344 tcaacaagcaggttaatggccgcatcatcaggaagcgtatccatgtccgtgtggagcatg 403 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 ||||||| ||| | |||| |||||||||| | ||||||| ||| || || |||| | Sbjct: 404 tgcagccctcccgttgcacagaggagttccgcttgaggaaagccaagaacgatcagctca 463 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 ||| || ||||||| |||||| ||||| |||||||| ||||||||||| | || |||| Sbjct: 464 aggttgatgccaaggaccgtggcgaggtgatcagcaccaagaggcagcctgtgggaccca 523 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| ||||| | || ||||||| || || || || || || |||| Sbjct: 524 aacctggcttcatggttgagggtgctacacttgagaccgttactcctattccctatgatg 583 Query: 361 tcgtcaacgatctcaagggtggttactagag 391 | || || ||||||||||| ||||||||||| Sbjct: 584 tggtaaatgatctcaaggggggttactagag 614
>gb|AC022457.8| Oryza sativa chromosome 10 BAC OSJNBa0006L06 genomic sequence, complete sequence Length = 162339 Score = 240 bits (121), Expect = 4e-60 Identities = 130/133 (97%) Strand = Plus / Minus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 15205 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagt 15146 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15145 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 15086 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 15085 tcaacaagcaggt 15073 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 138 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 197 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 14333 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 14274 Query: 198 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 257 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 14273 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 14214 Query: 258 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 316 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 14213 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 14155 Query: 317 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 14154 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 14095 Query: 377 gggtggttactag 389 ||||||||||||| Sbjct: 14094 gggtggttactag 14082
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 240 bits (121), Expect = 4e-60 Identities = 130/133 (97%) Strand = Plus / Minus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 16670688 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagt 16670629 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16670628 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 16670569 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 16670568 tcaacaagcaggt 16670556 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 138 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 197 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 16669816 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 16669757 Query: 198 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 257 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 16669756 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 16669697 Query: 258 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 316 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 16669696 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 16669638 Query: 317 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 16669637 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 16669578 Query: 377 gggtggttactag 389 ||||||||||||| Sbjct: 16669577 gggtggttactag 16669565
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 240 bits (121), Expect = 4e-60 Identities = 130/133 (97%) Strand = Plus / Minus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 16679728 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtgcacaaggggatgccgcacaagt 16679669 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16679668 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 16679609 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 16679608 tcaacaagcaggt 16679596 Score = 224 bits (113), Expect = 3e-55 Identities = 220/253 (86%), Gaps = 2/253 (0%) Strand = Plus / Minus Query: 138 aaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccaggtgc 197 ||||| || |||| ||||||||||||||||||||| ||||| |||||||||||||||||| Sbjct: 16678856 aaccgcattatcaggaagaggatccatgtccgtgtggagcatgtgcagccatccaggtgc 16678797 Query: 198 aatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaaggcc 257 | ||||||||||| || |||||| |||| || ||| |||| ||||| || |||||||| Sbjct: 16678796 actgaggagttccgcctgaggaagatcaagaacgaccagctcaaggcagatgccaaggct 16678737 Query: 258 cgtggtgaggtcatcagcacaaagaggcagccagcaggg-cccaagcccgggttcatggt 316 |||||||||||||||||||| ||||||||||| |||||| || |||||||| |||||||| Sbjct: 16678736 cgtggtgaggtcatcagcacgaagaggcagcc-gcagggtcctaagcccggcttcatggt 16678678 Query: 317 ggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 ||||| | || | ||||| ||||| ||||||||||||||||| ||||| |||||||| Sbjct: 16678677 tgagggtgcaacactggagactgtcacccccatcccgtacgatgtggtcaatgatctcaa 16678618 Query: 377 gggtggttactag 389 ||||||||||||| Sbjct: 16678617 gggtggttactag 16678605
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2246885 tcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 2246944 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246945 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 2247004 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 2247005 tcaacaagcaggt 2247017 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 2248074 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248133 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 2248134 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248193 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 2248194 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 2248253 Query: 309 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 368 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 2248254 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 2248313 Query: 369 gatctcaagggtggttactagagcgcttgtttc 401 |||||||||||||||||||||| ||||||||| Sbjct: 2248314 gatctcaagggtggttactagaatgcttgtttc 2248346 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 482 tggagtctgaacttctctgtggttaacattaaagattt 519 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 2248419 tggaatctgaacctctatgtggttaacattaaagattt 2248456
>gb|AC137930.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0030C11, complete sequence Length = 156647 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 137179 tcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 137238 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 137239 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 137298 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 137299 tcaacaagcaggt 137311 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 138368 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 138427 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 138428 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 138487 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 138488 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 138547 Query: 309 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 368 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 138548 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 138607 Query: 369 gatctcaagggtggttactagagcgcttgtttc 401 |||||||||||||||||||||| ||||||||| Sbjct: 138608 gatctcaagggtggttactagaatgcttgtttc 138640 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 482 tggagtctgaacttctctgtggttaacattaaagattt 519 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 138713 tggaatctgaacctctatgtggttaacattaaagattt 138750
>gb|AC137697.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0081A17, from chromosome 3, complete sequence Length = 134821 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Minus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 79171 tcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 79112 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79111 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 79052 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 79051 tcaacaagcaggt 79039 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Minus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 77982 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 77923 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 77922 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 77863 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 77862 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 77803 Query: 309 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 368 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 77802 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 77743 Query: 369 gatctcaagggtggttactagagcgcttgtttc 401 |||||||||||||||||||||| ||||||||| Sbjct: 77742 gatctcaagggtggttactagaatgcttgtttc 77710 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 482 tggagtctgaacttctctgtggttaacattaaagattt 519 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 77637 tggaatctgaacctctatgtggttaacattaaagattt 77600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2246897 tcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 2246956 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246957 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 2247016 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 2247017 tcaacaagcaggt 2247029 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 2248086 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 2248145 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 2248146 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 2248205 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 2248206 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 2248265 Query: 309 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 368 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 2248266 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 2248325 Query: 369 gatctcaagggtggttactagagcgcttgtttc 401 |||||||||||||||||||||| ||||||||| Sbjct: 2248326 gatctcaagggtggttactagaatgcttgtttc 2248358 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 482 tggagtctgaacttctctgtggttaacattaaagattt 519 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 2248431 tggaatctgaacctctatgtggttaacattaaagattt 2248468
>dbj|AK120267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047I10, full insert sequence Length = 2007 Score = 232 bits (117), Expect = 1e-57 Identities = 129/133 (96%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 187 tcggcgattacgtcgacgtcaaggtgaacggcgccgtgcacaagggcatgccgcacaagt 246 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 tctaccacggccgcaccggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 306 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 307 tcaacaagcaggt 319 Score = 184 bits (93), Expect = 2e-43 Identities = 228/273 (83%) Strand = Plus / Plus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 |||||||| ||||| ||||||| ||||||||||||||||||||| ||||| || |||||| Sbjct: 1376 caggtcggtaaccgcatcatcaggaagaggatccatgtccgtgtggagcatgtccagcca 1435 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 |||||||||| |||||| ||| || ||||||| |||| || || |||| ||||| || Sbjct: 1436 tccaggtgcaccgaggagctccgcctgaggaaaatcaagaacgatcagctcaaggctgat 1495 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 |||||||||||||||||||| |||||||| ||||| ||||| | || ||||| || || Sbjct: 1496 gccaaggcccgtggtgaggttatcagcaccaagagacagcccgagggacccaaacctggt 1555 Query: 309 ttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaac 368 |||||||| ||||| | || | ||||| || || ||||| ||||| ||||| ||||| Sbjct: 1556 ttcatggttgagggtgctacgctggagactgttacccccattccgtatgatgtggtcaat 1615 Query: 369 gatctcaagggtggttactagagcgcttgtttc 401 |||||||||||||||||||||| ||||||||| Sbjct: 1616 gatctcaagggtggttactagaatgcttgtttc 1648 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 482 tggagtctgaacttctctgtggttaacattaaagattt 519 |||| ||||||| ||| ||||||||||||||||||||| Sbjct: 1721 tggaatctgaacctctatgtggttaacattaaagattt 1758
>gb|AF457939.1| Zea mays clone cho1c.pk003.g2, mRNA sequence Length = 526 Score = 200 bits (101), Expect = 4e-48 Identities = 165/185 (89%), Gaps = 1/185 (0%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 144 tcggcgattacgtcgatgtcaaggtgaacggcgccgtccacaaggggatgccgcacaagt 203 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct: 204 tctaccacggccgcaccggtcgcgtctggaacgtcaccaagcgcgccatcggcgtcgagg 263 Query: 121 tcaac-aagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcac 179 ||||| ||||||||| || ||||||| |||| | |||||||||||||| ||||| Sbjct: 264 tcaacaaagcaggtcaatgggcgcatcatcaggaagcgtatccatgtccgtgtggagcat 323 Query: 180 gtgca 184 ||||| Sbjct: 324 gtgca 328 Score = 48.1 bits (24), Expect = 0.032 Identities = 71/84 (84%), Gaps = 2/84 (2%) Strand = Plus / Plus Query: 297 cccaagcccgggttcatggtggagggcaccacca-ttgagacagtcacacccatcccgta 355 ||||||||||| |||||||| ||||||| || || ||||||| || || ||||||| || Sbjct: 443 cccaagcccggcttcatggtcgagggcaacaacatttgagaccgtaac-tccatcccata 501 Query: 356 cgatgtcgtcaacgatctcaaggg 379 ||||| ||||| ||||||||||| Sbjct: 502 tgatgtggtcaatgatctcaaggg 525
>dbj|AP004496.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT11C13, TM0029a, complete sequence Length = 53909 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| |||||||||||| || |||||||||||||||||||| ||||| ||||||| Sbjct: 14827 tcggcgactacgtcgacgtcagagttaacggcgccgtccacaagggtatgcctcacaagt 14886 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| |||||||| || || |||||||| ||||||||||||||||||||||||||| Sbjct: 14887 tctaccatggccgcaccggtcgtgtctggaatgtcaccaagcgcgccatcggcgtcgagg 14946 Query: 121 tcaacaagcaggt 133 ||||||||||||| Sbjct: 14947 tcaacaagcaggt 14959 Score = 87.7 bits (44), Expect = 4e-14 Identities = 152/188 (80%) Strand = Plus / Plus Query: 129 caggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagcca 188 ||||| || |||||||| |||| |||||| || ||||| ||||| ||||| ||| |||| Sbjct: 15611 caggtgggaaaccggattatcaggaagagaattcatgtgcgtgtggagcatgtgatgcca 15670 Query: 189 tccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggag 248 ||| | |||| ||||||||||| | ||||| | || ||||| |||||||||| ||| Sbjct: 15671 tcccgttgcactgaggagttccgtctcaggaaggttaagaatgatcagctgaaggccgag 15730 Query: 249 gccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccggg 308 || |||||| |||||||| |||||||| ||||||||||| || |||||||| || || Sbjct: 15731 gctaaggccaagggtgaggtgatcagcaccaagaggcagcctgctgggcccaaaccaggt 15790 Query: 309 ttcatggt 316 |||||||| Sbjct: 15791 ttcatggt 15798
>ref|NM_100841.2| Arabidopsis thaliana structural constituent of ribosome AT1G09690 mRNA, complete cds Length = 755 Score = 133 bits (67), Expect = 7e-28 Identities = 301/379 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 148 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 207 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||| || || || || ||||||||||||| || |||||| |||| || || Sbjct: 208 tctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaag 267 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 268 tcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatg 327 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 |||||| ||| || || |||||||||| | |||||| || ||||| |||| | Sbjct: 328 tgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgatgagctca 387 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 |||| | ||||| ||| ||||||| ||||||||| ||||| ||||| ||| |||| Sbjct: 388 aggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaaggaccca 447 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| || || | ||| | ||||| ||||| || ||||||||||||| Sbjct: 448 aaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccgtacgatg 507 Query: 361 tcgtcaacgatctcaaggg 379 ||||||||||||||||||| Sbjct: 508 tcgtcaacgatctcaaggg 526
>gb|AY081656.1| Arabidopsis thaliana similar to ribosomal protein L21 (At1g09690) mRNA, complete cds Length = 538 Score = 133 bits (67), Expect = 7e-28 Identities = 301/379 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 107 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 166 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||| || || || || ||||||||||||| || |||||| |||| || || Sbjct: 167 tctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaag 226 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 227 tcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatg 286 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 |||||| ||| || || |||||||||| | |||||| || ||||| |||| | Sbjct: 287 tgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgatgagctca 346 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 |||| | ||||| ||| ||||||| ||||||||| ||||| ||||| ||| |||| Sbjct: 347 aggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaaggaccca 406 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| || || | ||| | ||||| ||||| || ||||||||||||| Sbjct: 407 aaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccgtacgatg 466 Query: 361 tcgtcaacgatctcaaggg 379 ||||||||||||||||||| Sbjct: 467 tcgtcaacgatctcaaggg 485
>gb|AY059923.1| Arabidopsis thaliana Similar to ribosomal protein L21 (At1g09690; F21M12.8) mRNA, complete cds Length = 665 Score = 133 bits (67), Expect = 7e-28 Identities = 301/379 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 148 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 207 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||| || || || || ||||||||||||| || |||||| |||| || || Sbjct: 208 tctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaag 267 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 268 tcaacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatg 327 Query: 181 tgcagccatccaggtgcaatgaggagttcctccagaggaaactcaacaatgacaagctga 240 |||||| ||| || || |||||||||| | |||||| || ||||| |||| | Sbjct: 328 tgcagcaatcaagatgtgctgaggagttcaagctgaggaagaagaagaatgatgagctca 387 Query: 241 aggcggaggccaaggcccgtggtgaggtcatcagcacaaagaggcagccagcagggccca 300 |||| | ||||| ||| ||||||| ||||||||| ||||| ||||| ||| |||| Sbjct: 388 aggctgcagccaaagccaatggtgagaccatcagcaccaagagacagcctaaaggaccca 447 Query: 301 agcccgggttcatggtggagggcaccaccattgagacagtcacacccatcccgtacgatg 360 | || || |||||||| || || | ||| | ||||| ||||| || ||||||||||||| Sbjct: 448 aaccaggattcatggtcgaaggaatgaccttggagactgtcactccaatcccgtacgatg 507 Query: 361 tcgtcaacgatctcaaggg 379 ||||||||||||||||||| Sbjct: 508 tcgtcaacgatctcaaggg 526
>gb|AF092950.1|AF092950 Cyanophora paradoxa ribosomal protein L21E (rpl21) mRNA, complete cds Length = 486 Score = 125 bits (63), Expect = 2e-25 Identities = 114/131 (87%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 98 |||||||||||||| ||||| ||||||||||||||| ||| |||||||||||| ||| Sbjct: 145 cacaagggcatgcccttcaagtactaccacggccgcactggcatcgtctggaacgtgacc 204 Query: 99 aagcgcgccatcggcgtcgagatcaacaagcaggtcggcaaccggatcatcaagaagagg 158 |||||||||||||| || ||||||||||||| |||| || |||| |||||||||||| | Sbjct: 205 aagcgcgccatcggtgtggagatcaacaagcgggtccgccaccgcatcatcaagaagcgc 264 Query: 159 atccatgtccg 169 ||||| ||||| Sbjct: 265 atccacgtccg 275
>ref|NM_100831.2| Arabidopsis thaliana structural constituent of ribosome AT1G09590 mRNA, complete cds Length = 675 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 121 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 180 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 181 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 240 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 241 tcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtggagcatg 300 Query: 181 tgcagc 186 |||||| Sbjct: 301 tgcagc 306 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|BT000775.1| Arabidopsis thaliana clone RAFL04-10-C15 (R11681) putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 672 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 121 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 180 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 181 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 240 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 241 tcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtggagcatg 300 Query: 181 tgcagc 186 |||||| Sbjct: 301 tgcagc 306 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>gb|AY059119.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 526 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 107 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 166 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 167 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 226 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 227 tcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtggagcatg 286 Query: 181 tgcagc 186 |||||| Sbjct: 287 tgcagc 292 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 366 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 425 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 426 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 482
>gb|AF370227.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g09590) mRNA, complete cds Length = 674 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 121 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 180 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 181 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 240 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 241 tcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtggagcatg 300 Query: 181 tgcagc 186 |||||| Sbjct: 301 tgcagc 306 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 380 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 439 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 440 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 496
>emb|BX816463.1|CNS0AANS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 569 Score = 107 bits (54), Expect = 4e-20 Identities = 153/186 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 89 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 148 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 149 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 208 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 209 tcaacaaacagattgggaacaggatcataaggaagaggattcatgttcgtgtggagcatg 268 Query: 181 tgcagc 186 |||||| Sbjct: 269 tgcagc 274 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 348 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 407 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 408 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 464
>emb|BX814291.1|CNS0ADUZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB66ZE01 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 660 Score = 99.6 bits (50), Expect = 1e-17 Identities = 152/186 (81%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 135 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 194 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||| || || || || ||||||||||||| || |||||| |||| || || Sbjct: 195 tctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaag 254 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 || |||| ||| | |||||| ||||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 255 tcgacaaacagattggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatg 314 Query: 181 tgcagc 186 |||||| Sbjct: 315 tgcagc 320 Score = 71.9 bits (36), Expect = 2e-09 Identities = 99/120 (82%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 394 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 453 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaaggg 379 || | ||| | ||||| ||||| || |||||||||||||||||||||||||||||||| Sbjct: 454 aggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctcaaggg 513
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 83.8 bits (42), Expect = 6e-13 Identities = 111/134 (82%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 88258 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 88317 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || || ||||||||||||||||||||||| |||| || || Sbjct: 88318 tctaccatggtcgtactggtcgtatctggaacgtcaccaagcgcgccgtcggtgttgaag 88377 Query: 121 tcaacaagcaggtc 134 ||||||| |||||| Sbjct: 88378 tcaacaaacaggtc 88391 Score = 58.0 bits (29), Expect = 3e-05 Identities = 95/117 (81%) Strand = Plus / Plus Query: 260 tggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggtgga 319 ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||||| || Sbjct: 89080 tggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatggtcga 89139 Query: 320 gggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctcaa 376 || | ||| | ||||| ||||| || ||||| ||||||||||||||||||||||| Sbjct: 89140 aggaatgaccttggagactgtcactccaatcccctacgatgtcgtcaacgatctcaa 89196
>emb|AJ131099.1|PAB131099 Picea abies microsatellite RNA, clone PAAG5, 5' end Length = 1129 Score = 75.8 bits (38), Expect = 1e-10 Identities = 119/146 (81%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 98 |||||||| ||||| |||||||||||||| || ||||| || |||||||| |||||| Sbjct: 187 cacaagggtatgcctcacaagttctaccatggtcgcaccggtgttgtctggaatgtcacc 246 Query: 99 aagcgcgccatcggcgtcgagatcaacaagcaggtcggcaaccggatcatcaagaagagg 158 ||||| || ||||||||||| || ||||| ||||| | ||| ||| ||||||||||| Sbjct: 247 aagcgagcaatcggcgtcgaaatgaacaaacaggttcgtaacaagattatcaagaagaga 306 Query: 159 atccatgtccgtgttgagcacgtgca 184 || ||||| || ||||||| ||||| Sbjct: 307 attcatgtacgaattgagcatgtgca 332
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 75.8 bits (38), Expect = 1e-10 Identities = 110/134 (82%) Strand = Plus / Minus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| || |||||||| || || |||||||||| ||||| ||||||| Sbjct: 24210 tcggcgattacgtcgatgtgaaggtgaatggtgcgatccacaagggtatgcctcacaagt 24151 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 |||||||||| || || || || ||||||||||||| || |||||| |||| || || Sbjct: 24150 tctaccacggtcgtactggtcgtatctggaacgtcactaaacgcgccgtcggtgttgaag 24091 Query: 121 tcaacaagcaggtc 134 ||||||| |||||| Sbjct: 24090 tcaacaaacaggtc 24077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 193/245 (78%) Strand = Plus / Minus Query: 135 ggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacgtgcagccatccagg 194 |||||| ||||||| | ||||||||| ||||| ||||| ||||| ||||||| ||| || Sbjct: 23547 ggcaacaggatcataaggaagaggattcatgtgcgtgtggagcatgtgcagcaatcaaga 23488 Query: 195 tgcaatgaggagttcctccagaggaaactcaacaatgacaagctgaaggcggaggccaag 254 || |||||||||| | |||||| || ||||| |||| ||||| | ||||| Sbjct: 23487 tgtgctgaggagttcaagctgaggaagaagaagaatgatgagctcaaggctgcagccaaa 23428 Query: 255 gcccgtggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatg 314 ||| ||||||| ||||||||| ||||| ||||| ||| ||||| || || |||||| Sbjct: 23427 gccaatggtgagaccatcagcaccaagagacagcctaaaggacccaaaccaggattcatg 23368 Query: 315 gtggagggcaccaccattgagacagtcacacccatcccgtacgatgtcgtcaacgatctc 374 || || || | ||| | ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 23367 gtcgaaggaatgaccttggagactgtcactccaatcccgtacgatgtcgtcaacgatctc 23308 Query: 375 aaggg 379 ||||| Sbjct: 23307 aaggg 23303
>ref|NM_104579.3| Arabidopsis thaliana structural constituent of ribosome AT1G57860 mRNA, complete cds Length = 669 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 477 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 529 Score = 56.0 bits (28), Expect = 1e-04 Identities = 145/184 (78%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 145 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 204 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| || || ||| | || || || Sbjct: 205 tctaccatggtcgtactggtcgcatctggaatgtcactaaacgtgccgttggtgttgaag 264 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 265 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 324 Query: 181 tgca 184 |||| Sbjct: 325 tgca 328
>ref|NM_104563.3| Arabidopsis thaliana structural constituent of ribosome AT1G57660 mRNA, complete cds Length = 715 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538 Score = 63.9 bits (32), Expect = 5e-07 Identities = 146/184 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 154 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 213 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| ||||| ||| | || || || Sbjct: 214 tctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaag 273 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 274 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 333 Query: 181 tgca 184 |||| Sbjct: 334 tgca 337
>gb|AC079733.1| Arabidopsis thaliana chromosome 1 BAC T8L23 genomic sequence, complete sequence Length = 90448 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 46951 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 47003 Score = 54.0 bits (27), Expect = 5e-04 Identities = 84/103 (81%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 46316 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 46375 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcg 103 ||||||| || || || || ||| ||||||| ||||| ||||| Sbjct: 46376 tctaccatggtcgtactggtcgcatctggaatgtcactaagcg 46418
>gb|AY091167.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 526 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491 Score = 63.9 bits (32), Expect = 5e-07 Identities = 146/184 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 107 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 166 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| ||||| ||| | || || || Sbjct: 167 tctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaag 226 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 227 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 286 Query: 181 tgca 184 |||| Sbjct: 287 tgca 290
>gb|AY050840.1| Arabidopsis thaliana putative 60S ribosomal protein L21 (At1g57660) mRNA, complete cds Length = 681 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 486 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 538 Score = 63.9 bits (32), Expect = 5e-07 Identities = 146/184 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 154 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 213 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| ||||| ||| | || || || Sbjct: 214 tctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaag 273 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 274 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 333 Query: 181 tgca 184 |||| Sbjct: 334 tgca 337
>emb|BX814226.1|CNS0AC0R Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB62ZA08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 674 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 445 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 497 Score = 61.9 bits (31), Expect = 2e-06 Identities = 145/183 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 113 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 172 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| ||||| ||| | || || || Sbjct: 173 tctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaag 232 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 233 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 292 Query: 181 tgc 183 ||| Sbjct: 293 tgc 295
>emb|BX841874.1|CNS09Y44 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH60ZG03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 658 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 481 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 533 Score = 40.1 bits (20), Expect = 7.9 Identities = 57/68 (83%), Gaps = 1/68 (1%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacgg-cgccgtccacaagggcatgccgcacaag 59 ||||||| ||||||| |||||||| || || ||| |||||||||| ||||| || ||| Sbjct: 142 tcggcgattacgtcgatgtcaaggttaatggacgctatccacaagggtatgcctcataag 201 Query: 60 ttctacca 67 |||||||| Sbjct: 202 ttctacca 209
>gb|AC079732.4|AC079732 Arabidopsis thaliana chromosome 1 BAC F12K22 genomic sequence, complete sequence Length = 43985 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 6271 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 6323 Score = 50.1 bits (25), Expect = 0.008 Identities = 79/97 (81%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 5640 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 5699 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcac 97 ||||||| || || || || ||| ||||||| ||||| Sbjct: 5700 tctaccatggtcgtactggtcgcatctggaatgtcac 5736
>gb|BT004794.1| Arabidopsis thaliana At1g57860 gene, complete cds Length = 495 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 439 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 491 Score = 56.0 bits (28), Expect = 1e-04 Identities = 145/184 (78%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 107 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 166 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| || || ||| | || || || Sbjct: 167 tctaccatggtcgtactggtcgcatctggaatgtcactaaacgtgccgttggtgttgaag 226 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 227 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 286 Query: 181 tgca 184 |||| Sbjct: 287 tgca 290
>gb|AY086851.1| Arabidopsis thaliana clone 28545 mRNA, complete sequence Length = 627 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 333 gagacagtcacacccatcccgtacgatgtcgtcaacgatctcaagggtggtta 385 ||||| ||||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 483 gagactgtcactcccattccttacgatgttgtcaacgatctcaagggtggtta 535 Score = 63.9 bits (32), Expect = 5e-07 Identities = 146/184 (79%) Strand = Plus / Plus Query: 1 tcggcgagcacgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagt 60 ||||||| ||||||| |||||||| || || || |||||||||| ||||| || |||| Sbjct: 151 tcggcgattacgtcgatgtcaaggttaatggagctatccacaagggtatgcctcataagt 210 Query: 61 tctaccacggccgcacgggccgcgtctggaacgtcaccaagcgcgccatcggcgtcgaga 120 ||||||| || || || || ||| ||||||| ||||| ||||| ||| | || || || Sbjct: 211 tctaccatggtcgtactggtcgcatctggaatgtcactaagcgtgccgttggtgttgaag 270 Query: 121 tcaacaagcaggtcggcaaccggatcatcaagaagaggatccatgtccgtgttgagcacg 180 ||||||| ||| | || ||| | ||||| | ||||||||| ||||| ||||| ||||| | Sbjct: 271 tcaacaaacagattgggaacagaatcataaggaagaggatacatgtgcgtgtggagcatg 330 Query: 181 tgca 184 |||| Sbjct: 331 tgca 334
>gb|AC156448.2| Volvox carteri clone JGIAOBO-33O24, complete sequence Length = 38975 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 83 cgtctggaacgtcaccaagcgcgccatcggcgtcgagatcaacaagc 129 ||||||||||||||| |||||||||||||| || ||||| ||||||| Sbjct: 4996 cgtctggaacgtcactaagcgcgccatcggtgtggagataaacaagc 5042
>gb|AY310808.1| Nicotiana benthamiana clone 12-130 unknown mRNA Length = 388 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 261 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 316 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 140 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 195
>emb|AJ718457.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC1-11-430, cultivar Bright Yellow 2 Length = 384 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 261 ggtgaggtcatcagcacaaagaggcagccagcagggcccaagcccgggttcatggt 316 |||||||||||||||||||||||||| || ||| ||||| || ||||||||||| Sbjct: 91 ggtgaggtcatcagcacaaagaggcaacctcaaggacccaaaccagggttcatggt 146
>emb|AL132977.1|ATT10K17 Arabidopsis thaliana DNA chromosome 3, BAC clone T10K17 Length = 109016 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 340 tcacacccatcccgtacgatgtcgtcaacgatctcaagggtg 381 |||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 13307 tcactcccatcccatacgatgtcgtcaacgacttcaagggtg 13266 Score = 40.1 bits (20), Expect = 7.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 143 gatcatcaagaagaggatccatgtccgtgttgagcacgtgcagc 186 |||||| | ||||||||||||||| | ||| ||||| ||||||| Sbjct: 13504 gatcataaggaagaggatccatgttcttgtggagcatgtgcagc 13461
>gb|DQ066307.1| Ixodes scapularis isolate IS-6-12L-52 ribosomal protein L21 mRNA, complete cds Length = 486 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 10 acgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacg 69 |||| ||||| |||| ||||| ||| |||| ||||| ||||||||||| |||||||||| Sbjct: 116 acgttgacgttaagggcaacggagccttccaaaagggtatgccgcacaaattctaccacg 175 Query: 70 gc 71 || Sbjct: 176 gc 177
>ref|XM_959139.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 11 cgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacgg 70 ||||||| ||||||| ||||| || ||||| ||||| ||| | |||||| |||||||||| Sbjct: 117 cgtcgacatcaaggtcaacggtgctgtccagaagggtatggcccacaaggtctaccacgg 176 Query: 71 c 71 | Sbjct: 177 c 177
>ref|XM_329137.1| Neurospora crassa OR74A hypothetical protein (NCU01948.1) partial mRNA Length = 483 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 11 cgtcgacgtcaaggtgaacggcgccgtccacaagggcatgccgcacaagttctaccacgg 70 ||||||| ||||||| ||||| || ||||| ||||| ||| | |||||| |||||||||| Sbjct: 117 cgtcgacatcaaggtcaacggtgctgtccagaagggtatggcccacaaggtctaccacgg 176 Query: 71 c 71 | Sbjct: 177 c 177
>ref|XM_505036.1| Yarrowia lipolytica CLIB122, YALI0F05522g predicted mRNA Length = 486 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 37 tccacaagggcatgccgcacaagttctaccacggccg 73 |||| ||||| ||||| |||||||||||||||||||| Sbjct: 143 tccagaagggtatgccccacaagttctaccacggccg 179
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Minus Query: 37 tccacaagggcatgccgcacaagttctaccacggccg 73 |||| ||||| ||||| |||||||||||||||||||| Sbjct: 825816 tccagaagggtatgccccacaagttctaccacggccg 825780
>ref|XM_799307.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053507251.20) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 48 atgccgcacaagttctaccacggccgcacggg 79 ||||| ||||||| |||||||||||||||||| Sbjct: 154 atgccacacaagtactaccacggccgcacggg 185
>ref|XM_807657.1| Trypanosoma cruzi strain CL Brener ribosomal protein L21E (60S) (Tc00.1047053506405.149) partial mRNA Length = 480 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Plus Query: 48 atgccgcacaagttctaccacggccgcacggg 79 ||||| ||||||| |||||||||||||||||| Sbjct: 154 atgccacacaagtactaccacggccgcacggg 185
>ref|XM_455019.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E23727g predicted mRNA Length = 483 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 37 tccacaagggcatgccgcacaagttctacca 67 |||||||||| ||||| |||||||||||||| Sbjct: 143 tccacaagggtatgccacacaagttctacca 173
>gb|DQ191668.1| Solanum tuberosum 60S ribosomal protein L21-like protein mRNA, complete cds Length = 751 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctaccacggccgcacgggccgcgtctggaacgtcacc 98 |||||||| ||||| |||||||||||||| || || || || || || ||||| || ||| Sbjct: 204 cacaagggaatgcctcacaagttctaccatggacgtactggtcgtgtttggaatgttacc 263 Query: 99 aagcgcgccatcggcgtcgagatcaacaagcaggt 133 || |||||| | || || || ||||||||||||| Sbjct: 264 aaacgcgccgttggtgttgaagtcaacaagcaggt 298
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Minus Query: 37 tccacaagggcatgccgcacaagttctacca 67 |||||||||| ||||| |||||||||||||| Sbjct: 2101982 tccacaagggtatgccacacaagttctacca 2101952 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 499 tgtggttaacattaaagatt 518 |||||||||||||||||||| Sbjct: 1135044 tgtggttaacattaaagatt 1135063
>ref|NM_190560.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 303 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Plus Query: 53 gcacaagttctaccacggccgcacgg 78 ||||||||||| |||||||||||||| Sbjct: 46 gcacaagttctgccacggccgcacgg 71
>gb|AY292616.1| Oikopleura dioica 60S ribosomal protein L21 (RL21) gene, complete cds Length = 578 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Plus Query: 37 tccacaagggcatgccgcacaagttctaccacgg 70 |||| ||||| |||||||||||| |||||||||| Sbjct: 196 tccagaagggtatgccgcacaaggtctaccacgg 229
>ref|XM_570887.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l21-a (CNE02170) partial mRNA Length = 559 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 42 aagggcatgccgcacaagttctaccacggc 71 ||||| ||||| |||||||||||||||||| Sbjct: 162 aagggtatgccccacaagttctaccacggc 191
>emb|Z49705.1|SC8520X S.cerevisiae chromosome XIII cosmid 8520 Length = 41200 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 554 atatatttacatttggtcgata 575 |||||||||||||||||||||| Sbjct: 4767 atatatttacatttggtcgata 4788
>ref|XM_525315.1| PREDICTED: Pan troglodytes similar to disks large-associated protein 4 isoform a; disks large associated protein 4; SAP90/PSD-95-associated protein 4; PSD-95/SAP90 binding protein 4 (LOC469930), mRNA Length = 4473 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 1645 gaggccaaggcccgtggtgag 1665
>gb|DQ207854.1| Solanum tuberosum clone 076C12 unknown mRNA Length = 725 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctacca 67 |||||||| ||||| |||||||||||||| Sbjct: 171 cacaagggaatgcctcacaagttctacca 199
>ref|NM_014902.2| Homo sapiens discs, large (Drosophila) homolog-associated protein 4 (DLGAP4), transcript variant 1, mRNA Length = 5007 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 817 gaggccaaggcccgtggtgag 837
>ref|XM_534410.2| PREDICTED: Canis familiaris similar to disks large-associated protein 4 isoform b, transcript variant 1 (LOC477219), mRNA Length = 3855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 382 gaggccaaggcccgtggtgag 402
>ref|XM_860394.1| PREDICTED: Canis familiaris similar to disks large-associated protein 4 isoform b, transcript variant 4 (LOC477219), mRNA Length = 3846 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 382 gaggccaaggcccgtggtgag 402
>emb|AL390374.16| Human DNA sequence from clone CTD-2182L9 on chromosome 20 Contains part of a novel gene (KIAA0964) and two CpG islands, complete sequence Length = 65831 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 8548 gaggccaaggcccgtggtgag 8568
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctacca 67 |||||||| ||||| |||||||||||||| Sbjct: 163874 cacaagggtatgccacacaagttctacca 163902
>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete genome Length = 11398 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 231 gacaagctgaaggcggaggcc 251 ||||||||||||||||||||| Sbjct: 6109 gacaagctgaaggcggaggcc 6089
>dbj|AB023181.1| Homo sapiens mRNA for KIAA0964 protein, partial cds Length = 5007 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 246 gaggccaaggcccgtggtgag 266 ||||||||||||||||||||| Sbjct: 817 gaggccaaggcccgtggtgag 837
>ref|NM_209960.1| Eremothecium gossypii AEL254Wp (AEL254W), mRNA Length = 483 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 39 cacaagggcatgccgcacaagttctacca 67 |||||||| ||||| |||||||||||||| Sbjct: 145 cacaagggtatgccacacaagttctacca 173
>ref|XM_753406.1| Ustilago maydis 521 hypothetical protein (UM02352.1) partial mRNA Length = 516 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 42 aagggcatgccgcacaagttctaccacggccg 73 ||||| ||||| ||||||| |||||||||||| Sbjct: 181 aagggtatgccccacaagtactaccacggccg 212
>ref|XM_750518.1| Aspergillus fumigatus Af293 hypothetical protein (Afu2g12800) partial mRNA Length = 579 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 acgatgtcgtcaacgatctc 374 |||||||||||||||||||| Sbjct: 491 acgatgtcgtcaacgatctc 510
>emb|Z83851.17|HS989H11 Human DNA sequence from clone CTA-989H11 on chromosome 22q13.1-13.2, complete sequence Length = 118831 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aggcagccagcagggcccaa 301 |||||||||||||||||||| Sbjct: 65341 aggcagccagcagggcccaa 65360
>emb|AL591521.8| Human DNA sequence from clone RP5-965F6 on chromosome 1 Contains the 5' end of a novel gene and a thioredoxin (TXN) pseudogene, complete sequence Length = 97110 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 ggaaactcaacaatgacaag 236 |||||||||||||||||||| Sbjct: 35982 ggaaactcaacaatgacaag 35963
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 69 ggccgcacgggccgcgtctggaac 92 |||||||||||||||| ||||||| Sbjct: 1119351 ggccgcacgggccgcgactggaac 1119374
>emb|AL355522.11| Human DNA sequence from clone RP11-546O15 on chromosome 6 Contains the 3' end of the CLIC5 gene for chloride intracellular channel 5, complete sequence Length = 182982 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 225 aacaatgacaagctgaaggc 244 |||||||||||||||||||| Sbjct: 13208 aacaatgacaagctgaaggc 13227
>emb|AL162726.16| Human DNA sequence from clone RP11-15B24 on chromosome 9 Contains a cytochrome c oxidase III (COIII) (MTCO3) pseudogene, a novel pseudogene and three novel genes, complete sequence Length = 195824 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 agggcaccaccattgagaca 338 |||||||||||||||||||| Sbjct: 66392 agggcaccaccattgagaca 66411
>emb|AL353616.14| Human DNA sequence from clone RP11-274B18 on chromosome 9 Contains the 3' end of the PGM5 gene for phosphoglucomutase 5 (PGMRP), a novel gene (MGC34760), a squamous cell carcinoma antigen recognized by T cell (SART2) pseudogene and 2 novel genes, complete sequence Length = 169993 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ctcaacaatgacaagctgaa 241 |||||||||||||||||||| Sbjct: 126842 ctcaacaatgacaagctgaa 126861
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 91 acgtcaccaagcgcgccatcggcg 114 |||||||||||||||||| ||||| Sbjct: 249864 acgtcaccaagcgcgccaacggcg 249841
>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the Psme4 gene for proteasome (prosome, macropain) activator subunit 4, the Gpr75 gene for G protein-coupled receptor 75, a novel pseudogene, a PDZ and LIM domain 1 (elfin) (Pdlim1) pseudogene, two novel genes, the 5' end of the Asb3 gene for ankyrin repeat and SOCS box-containing protein 3, a methyl-CpG binding domain protein 2 interacting protein (Mbdin) pseudogene and a CpG island, complete sequence Length = 244971 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 501 tggttaacattaaagatttt 520 |||||||||||||||||||| Sbjct: 89665 tggttaacattaaagatttt 89684
>gb|AC104021.5| Homo sapiens chromosome 8, clone RP11-378A12, complete sequence Length = 135998 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 actcaacaatgacaagctga 240 |||||||||||||||||||| Sbjct: 126485 actcaacaatgacaagctga 126504
>gb|AC133633.5| Homo sapiens chromosome 8, clone CTD-2517C5, complete sequence Length = 94195 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 actcaacaatgacaagctga 240 |||||||||||||||||||| Sbjct: 84610 actcaacaatgacaagctga 84591
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 cgtctggaacgtcaccaagc 102 |||||||||||||||||||| Sbjct: 1213948 cgtctggaacgtcaccaagc 1213929 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,938,045 Number of Sequences: 3902068 Number of extensions: 4938045 Number of successful extensions: 94782 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 94351 Number of HSP's gapped (non-prelim): 415 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
