ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9c07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY826150.1| Aedes albopictus clone AL_337 60S ribosomal protein L11 mRNA, complete cds Length = 552 Score = 40.1 bits (20), Expect = 0.17 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctga 30 |||||||||||||||||||| Sbjct: 120 caaggtgttggagcagctga 139
>dbj|AK070605.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023055B20, full insert sequence Length = 916 Score = 40.1 bits (20), Expect = 0.17 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctga 30 |||||||||||||||||||| Sbjct: 180 caaggtgttggagcagctga 199
>dbj|AK062150.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-H04, full insert sequence Length = 1584 Score = 40.1 bits (20), Expect = 0.17 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctga 30 |||||||||||||||||||| Sbjct: 954 caaggtgttggagcagctga 973
>gb|AF022736.1|AF022736 Oryza sativa ribosomal protein mRNA, complete cds Length = 905 Score = 40.1 bits (20), Expect = 0.17 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctga 30 |||||||||||||||||||| Sbjct: 162 caaggtgttggagcagctga 181
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 38720 caaggtgttggagcagctg 38738
>gb|DQ196189.1| Triticum aestivum cultivar WH 542 cystatin gene, partial sequence Length = 1006 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 483 caaggtgttggagcagctg 501
>ref|NM_209888.1| Eremothecium gossypii AEL325Wp (AEL325W), mRNA Length = 525 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 102 caaggtgttggagcagctg 120
>gb|DQ279931.1| Triticum aestivum genotype WH-542 cystatin WC-4 mRNA, complete cds Length = 538 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 446 caaggtgttggagcagctg 464
>gb|DQ279930.1| Triticum aestivum genotype HD-29 cystatin WC-4 mRNA, complete cds Length = 538 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 446 caaggtgttggagcagctg 464
>dbj|AB038393.1| Triticum aestivum WC4 mRNA for cysteine proteinase inhibitor, complete cds Length = 720 Score = 38.2 bits (19), Expect = 0.67 Identities = 19/19 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagctg 29 ||||||||||||||||||| Sbjct: 457 caaggtgttggagcagctg 475
>ref|NM_180806.1| Arabidopsis thaliana structural constituent of ribosome AT5G45775 transcript variant AT5G45775.1 mRNA, complete cds Length = 828 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 171 caaggtgttggagcagct 188
>ref|NM_123945.2| Arabidopsis thaliana structural constituent of ribosome AT5G45775 transcript variant AT5G45775.2 mRNA, complete cds Length = 827 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 170 caaggtgttggagcagct 187
>gb|AC115786.8| Mus musculus chromosome 5, clone RP23-170E15, complete sequence Length = 193480 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 119080 caaggtgttggagcagct 119063
>ref|NM_000975.2| Homo sapiens ribosomal protein L11 (RPL11), mRNA Length = 609 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 131 caaggtgttggagcagct 148
>ref|XM_513195.1| PREDICTED: Pan troglodytes similar to ribosomal protein L11 (LOC456619), mRNA Length = 2308 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 1317 caaggtgttggagcagct 1334
>gb|AC104280.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1430_B02, complete sequence Length = 75456 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 aggtgttggagcagctga 30 |||||||||||||||||| Sbjct: 3205 aggtgttggagcagctga 3222
>gb|BC025077.1| Mus musculus ribosomal protein L11, mRNA (cDNA clone MGC:35693 IMAGE:2647882), complete cds Length = 598 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 118 caaggtgttggagcagct 135
>ref|NM_025919.1| Mus musculus ribosomal protein L11 (Rpl11), mRNA Length = 596 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 131 caaggtgttggagcagct 148
>gb|BC021402.1| Mus musculus ribosomal protein L11, mRNA (cDNA clone MGC:29111 IMAGE:4039711), complete cds Length = 599 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 119 caaggtgttggagcagct 136
>ref|XM_001002764.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC328825), mRNA Length = 617 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 119 caaggtgttggagcagct 136
>ref|XM_911700.2| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC328825), mRNA Length = 617 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 119 caaggtgttggagcagct 136
>ref|XM_286185.6| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC328825), mRNA Length = 617 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 119 caaggtgttggagcagct 136
>ref|XM_976864.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC235424), mRNA Length = 619 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 127 caaggtgttggagcagct 144
>ref|XM_976158.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC665330), mRNA Length = 619 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 127 caaggtgttggagcagct 144
>ref|XR_003409.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC631553), mRNA Length = 813 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 134 caaggtgttggagcagct 151
>ref|XR_003560.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L11 (LOC194197), mRNA Length = 529 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 111 caaggtgttggagcagct 128
>gb|BC021918.1| Mus musculus cDNA clone IMAGE:4485748, **** WARNING: chimeric clone **** Length = 2069 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 1588 caaggtgttggagcagct 1605
>ref|XM_798156.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L11 (Tc00.1047053508197.10) partial mRNA Length = 579 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 aaggtgttggagcagctg 29 |||||||||||||||||| Sbjct: 121 aaggtgttggagcagctg 138
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 70905 caaggtgttggagcagct 70922
>emb|X62146.1|RRRPL11 R.rattus mRNA for ribosomal protein L11 Length = 585 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 128 caaggtgttggagcagct 145
>emb|AL451000.16| Human DNA sequence from clone RP11-223J15 on chromosome 1 Contains a novel gene (MDS2), a eukaryotic translation elongation factor 1 alpha 2 (EEF1A2) pseudogene and the RPL11 gene for ribosomal protein L11, complete sequence Length = 115566 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 105417 caaggtgttggagcagct 105434
>emb|AL356128.27| Human DNA sequence from clone RP11-366I13 on chromosome 10 Contains the IDE gene for insulin-degrading enzyme, the 5' end of the KIF11 gene for kinesin family member 11, a ribosomal protein L11 (RPL11) pseudogene and two CpG islands, complete sequence Length = 191935 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 147723 caaggtgttggagcagct 147706
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 207135 caaggtgttggagcagct 207152
>emb|CR858471.1| Pongo pygmaeus mRNA; cDNA DKFZp468I2311 (from clone DKFZp468I2311) Length = 689 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, complete sequence Length = 166218 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 85282 caaggtgttggagcagct 85265
>emb|CR626653.1| full-length cDNA clone CS0DL001YE16 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 589 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 118 caaggtgttggagcagct 135
>emb|CR625076.1| full-length cDNA clone CS0DL002YI20 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 572 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 94 caaggtgttggagcagct 111
>emb|CR601780.1| full-length cDNA clone CS0CAP008YF02 of Thymus of Homo sapiens (human) Length = 488 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 17 caaggtgttggagcagct 34
>emb|CR597812.1| full-length cDNA clone CS0DI084YG07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1974 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 101 caaggtgttggagcagct 118
>emb|CR597577.1| full-length cDNA clone CS0DI024YH20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 585 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 114 caaggtgttggagcagct 131
>gb|AF432212.1| Homo sapiens CLL-associated antigen KW-12 mRNA, partial cds Length = 579 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 107 caaggtgttggagcagct 124
>gb|AY078021.1| Arabidopsis thaliana AT4g18730/F28A21_140 mRNA, complete cds Length = 549 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 108 caaggtgttggagcagct 125
>dbj|AK153486.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830166I12 product:ribosomal protein L11, full insert sequence Length = 595 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>dbj|AK164445.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230034M23 product:ribosomal protein L11, full insert sequence Length = 594 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>dbj|AK169053.1| Mus musculus 17 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920077F13 product:ribosomal protein L11, full insert sequence Length = 595 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>dbj|AK013923.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3100002N06 product:hypothetical Ribosomal protein L5 containing protein, full insert sequence Length = 595 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>emb|X79234.1|HSRPL11 Homo sapiens mRNA for ribosomal protein L11 Length = 591 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 111 caaggtgttggagcagct 128
>dbj|AK088967.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430034A18 product:ribosomal protein L11, cytosolic homolog [Rattus norvegicus], full insert sequence Length = 591 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 134 caaggtgttggagcagct 151
>dbj|AK002998.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:0710005K21 product:hypothetical Ribosomal protein L5 structure containing protein, full insert sequence Length = 589 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 132 caaggtgttggagcagct 149
>gb|AF101385.3|HOMORPL2 Homo sapiens ribosomal protein L11 gene, complete cds Length = 5373 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 1660 caaggtgttggagcagct 1677
>dbj|AK008422.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010203J19 product:hypothetical Ribosomal protein L5 containing protein, full insert sequence Length = 596 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 131 caaggtgttggagcagct 148
>gb|AF385722.1|AF385722 Arabidopsis thaliana AT4g18730/F28A21_140 mRNA, complete cds Length = 749 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 170 caaggtgttggagcagct 187
>dbj|AK011800.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610102K11 product:60S RIBOSOMAL PROTEIN L11 homolog [Homo sapiens], full insert sequence Length = 594 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 129 caaggtgttggagcagct 146
>dbj|AK014593.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4632426C10 product:unclassifiable, full insert sequence Length = 2795 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 130 caaggtgttggagcagct 147
>dbj|AK011211.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2600014G17 product:ribosomal protein L11, cytosolic homolog [Rattus norvegicus], full insert sequence Length = 582 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 125 caaggtgttggagcagct 142
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 aggtgttggagcagctga 30 |||||||||||||||||| Sbjct: 6565151 aggtgttggagcagctga 6565168
>gb|AC153849.8| Mus musculus BAC RP23-97L11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 205220 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 82651 caaggtgttggagcagct 82668
>gb|AY086211.1| Arabidopsis thaliana clone 22470 mRNA, complete sequence Length = 741 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 171 caaggtgttggagcagct 188
>ref|XM_578503.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L11 (LOC366494), mRNA Length = 534 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 111 caaggtgttggagcagct 128
>gb|AY892917.1| Synthetic construct Homo sapiens clone FLH135007.01L ribosomal protein L11 (RPL11) mRNA, partial cds Length = 534 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 108 caaggtgttggagcagct 125
>gb|AY890457.1| Synthetic construct Homo sapiens clone FLH135011.01X ribosomal protein L11 (RPL11) mRNA, complete cds Length = 534 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 108 caaggtgttggagcagct 125
>emb|BX530725.11| Mouse DNA sequence from clone RP23-49E16 on chromosome 4, complete sequence Length = 80674 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 25328 caaggtgttggagcagct 25311
>emb|AL672186.7| Mouse DNA sequence from clone RP23-42G2 on chromosome X, complete sequence Length = 205757 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 150694 caaggtgttggagcagct 150711
>gb|BC069896.1| Mus musculus ribosomal protein L11, mRNA (cDNA clone MGC:78121 IMAGE:6475559), complete cds Length = 613 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 112 caaggtgttggagcagct 129
>gb|BC018970.2| Homo sapiens ribosomal protein L11, mRNA (cDNA clone MGC:19586 IMAGE:4337066), complete cds Length = 611 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 115 caaggtgttggagcagct 132
>gb|AC102377.14| Mus musculus chromosome 18, clone RP23-416I22, complete sequence Length = 188005 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 39325 caaggtgttggagcagct 39342
>gb|DQ206471.1| Platynereis dumerilii isolate TOA19 ribosomal protein 11 large subunit mRNA, partial cds Length = 220 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 27 caaggtgttggagcagct 44
>gb|BC097372.1| Rattus norvegicus ribosomal protein L11, mRNA (cDNA clone MGC:114407 IMAGE:7444187), complete cds Length = 935 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 447 caaggtgttggagcagct 464
>ref|NM_001025739.1| Rattus norvegicus ribosomal protein L11 (Rpl11), mRNA Length = 935 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 447 caaggtgttggagcagct 464
>gb|L05092.1|HUMRIBPROC Homo sapiens ribosomal protein L11 mRNA, complete cds Length = 582 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 114 caaggtgttggagcagct 131
>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133, complete sequence Length = 106411 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 94207 caaggtgttggagcagct 94224
>gb|M88489.1|MUSNBP Mus musculus nonamer binding protein mRNA, complete cds Length = 1674 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Minus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 211 caaggtgttggagcagct 194
>emb|AL606934.12| Mouse DNA sequence from clone RP23-138L21 on chromosome 4, complete sequence Length = 211580 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 179471 caaggtgttggagcagct 179488
>dbj|D16671.1|EGRMTC3SI Euglena gracilis mitochondrial mRNA for complex III subunit I, complete cds Length = 1572 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 12 aaggtgttggagcagctg 29 |||||||||||||||||| Sbjct: 861 aaggtgttggagcagctg 878
>dbj|AB007171.1| Homo sapiens gene for ribosomal protein L11, partial cds Length = 187 Score = 36.2 bits (18), Expect = 2.7 Identities = 18/18 (100%) Strand = Plus / Plus Query: 11 caaggtgttggagcagct 28 |||||||||||||||||| Sbjct: 63 caaggtgttggagcagct 80 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 137,934 Number of Sequences: 3902068 Number of extensions: 137934 Number of successful extensions: 31475 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31379 Number of HSP's gapped (non-prelim): 96 length of query: 32 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 12 effective length of database: 17,155,003,908 effective search space: 205860046896 effective search space used: 205860046896 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
