ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9b24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009473.1| Triticum aestivum clone wr1.pk0030.b10:fis, full insert mRNA sequence Length = 2604 Score = 468 bits (236), Expect = e-129 Identities = 268/278 (96%), Gaps = 1/278 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 1101 atgttcgctcagctttggcttcagtcatcatgggaa-tggcccctgtcttggggaaggat 1159 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1160 gctaccattgaacaacttcttcctatttttctttctttgctgaaggatgaatttcctgat 1219 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1220 gttcgactgaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 1279 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1280 ctgtcgcaatctctattgccggctattgtagaacttgcggaggataggcactggagggtt 1339 Query: 241 cgccttgcaataatagagtacatccctctgctggctag 278 || ||||||||||| ||||||||||||||||||||||| Sbjct: 1340 cggcttgcaataattgagtacatccctctgctggctag 1377
>gb|AY128687.1| Lolium perenne protein phosphatase 2A regulatory A subunit mRNA, partial cds Length = 1160 Score = 387 bits (195), Expect = e-104 Identities = 251/269 (93%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||| Sbjct: 118 atgttcgctcagctttggcttcagtcatcatgggga-tggcccctgttctggggaaggat 176 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 gctaccattgaacaactacttcctatttttctttctttgctgaaggacgaatttcctgat 236 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 || || || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gtgcggctgaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 296 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||| ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 297 ctgtcacaatctctattgccggcaattgtagaacttgcggaggataggcactggagggtt 356 Query: 241 cgccttgcaataatagagtacatccctct 269 || ||||| ||||| |||||||||||||| Sbjct: 357 cggcttgcgataattgagtacatccctct 385
>ref|XM_450276.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2211 Score = 311 bits (157), Expect = 6e-82 Identities = 237/263 (90%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| ||||||||||||||||| || ||||||| ||||||| |||||||| ||||| Sbjct: 1203 atgttcgttcagctttggcttcagttattatgggaa-tggccccggtcttgggaaaggag 1261 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 ||||| ||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1262 gctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttcctgat 1321 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1322 gttcggctcaatataatcagcaagctcgatcaagttaatcaggttattggaattgatttg 1381 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||| ||||| || |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1382 ctgtcacaatcactgttaccggcgatcgtagaacttgcagaggataggcactggagggtt 1441 Query: 241 cgccttgcaataatagagtacat 263 || ||||||||||| |||||||| Sbjct: 1442 cggcttgcaataattgagtacat 1464
>emb|AJ243828.1|OSA243828 Oryza sativa mRNA for protein phosphatase 2A regulatory A subunit (RPA1 gene) Length = 2225 Score = 311 bits (157), Expect = 6e-82 Identities = 237/263 (90%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| ||||||||||||||||| || ||||||| ||||||| |||||||| ||||| Sbjct: 1167 atgttcgttcagctttggcttcagttattatgggaa-tggccccggtcttgggaaaggag 1225 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 ||||| ||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1226 gctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttcctgat 1285 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1286 gttcggctcaatataatcagcaagctcgatcaagttaatcaggttattggaattgatttg 1345 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||| ||||| || |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1346 ctgtcacaatcactgttaccggcgatcgtagaacttgcagaggataggcactggagggtt 1405 Query: 241 cgccttgcaataatagagtacat 263 || ||||||||||| |||||||| Sbjct: 1406 cggcttgcaataattgagtacat 1428
>dbj|AK069757.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031G02, full insert sequence Length = 2210 Score = 311 bits (157), Expect = 6e-82 Identities = 237/263 (90%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| ||||||||||||||||| || ||||||| ||||||| |||||||| ||||| Sbjct: 1202 atgttcgttcagctttggcttcagttattatgggaa-tggccccggtcttgggaaaggag 1260 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 ||||| ||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1261 gctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttcctgat 1320 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1321 gttcggctcaatataatcagcaagctcgatcaagttaatcaggttattggaattgatttg 1380 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||| ||||| || |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 1381 ctgtcacaatcactgttaccggcgatcgtagaacttgcagaggataggcactggagggtt 1440 Query: 241 cgccttgcaataatagagtacat 263 || ||||||||||| |||||||| Sbjct: 1441 cggcttgcaataattgagtacat 1463
>dbj|AK059103.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D03, full insert sequence Length = 1448 Score = 311 bits (157), Expect = 6e-82 Identities = 237/263 (90%), Gaps = 1/263 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| ||||||||||||||||| || ||||||| ||||||| |||||||| ||||| Sbjct: 523 atgttcgttcagctttggcttcagttattatgggaa-tggccccggtcttgggaaaggag 581 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 ||||| ||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| Sbjct: 582 gctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttcctgat 641 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 642 gttcggctcaatataatcagcaagctcgatcaagttaatcaggttattggaattgatttg 701 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 ||||| ||||| || |||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 702 ctgtcacaatcactgttaccggcgatcgtagaacttgcagaggataggcactggagggtt 761 Query: 241 cgccttgcaataatagagtacat 263 || ||||||||||| |||||||| Sbjct: 762 cggcttgcaataattgagtacat 784
>gb|BT018906.1| Zea mays clone EL01T0208F11.d mRNA sequence Length = 2095 Score = 246 bits (124), Expect = 3e-62 Identities = 231/266 (86%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| |||||||| || ||||| || ||||||| |||| ||||| |||| |||||| Sbjct: 1137 atgttcgttcagctttagcctcagtgattatgggaa-tggctcctgtactgggaaaggat 1195 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| |||| ||| |||| ||||| || |||||| |||| ||||||||||||||| Sbjct: 1196 gctaccattgaacagcttgttccaattttcctctctttgttgaaagacgaatttcctgat 1255 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1256 gttcgacttaacataatcagcaaacttgatcaagttaatcaggttattggaattgacttg 1315 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 || || ||||| || |||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 1316 ctatctcaatcactgctaccagcaattgtagaacttgcagaggataggcactggagagtc 1375 Query: 241 cgccttgcaataatagagtacatccc 266 || ||||||||||| ||||||||||| Sbjct: 1376 cggcttgcaataattgagtacatccc 1401
>gb|BT016817.1| Zea mays clone Contig650 mRNA sequence Length = 1853 Score = 246 bits (124), Expect = 3e-62 Identities = 231/266 (86%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| |||||||| || ||||| || ||||||| |||| ||||| |||| |||||| Sbjct: 844 atgttcgttcagctttagcctcagtgattatgggaa-tggctcctgtactgggaaaggat 902 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| |||| ||| |||| ||||| || |||||| |||| ||||||||||||||| Sbjct: 903 gctaccattgaacagcttgttccaattttcctctctttgttgaaagacgaatttcctgat 962 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 963 gttcgacttaacataatcagcaaacttgatcaagttaatcaggttattggaattgacttg 1022 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 || || ||||| || |||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 1023 ctatctcaatcactgctaccagcaattgtagaacttgcagaggataggcactggagagtc 1082 Query: 241 cgccttgcaataatagagtacatccc 266 || ||||||||||| ||||||||||| Sbjct: 1083 cggcttgcaataattgagtacatccc 1108
>gb|AY940682.1| Zea mays protein phosphatase 2A regulatory subunit A mRNA, complete cds Length = 2106 Score = 246 bits (124), Expect = 3e-62 Identities = 231/266 (86%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| |||||||| || ||||| || ||||||| |||| ||||| |||| |||||| Sbjct: 1161 atgttcgttcagctttagcctcagtgattatgggaa-tggctcctgtactgggaaaggat 1219 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| |||| ||| |||| ||||| || |||||| |||| ||||||||||||||| Sbjct: 1220 gctaccattgaacagcttgttccaattttcctctctttgttgaaagacgaatttcctgat 1279 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 |||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||| Sbjct: 1280 gttcgacttaacataatcagcaaacttgatcaagttaatcaggttattggaattgacttg 1339 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 || || ||||| || |||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 1340 ctatctcaatcactgctaccagcaattgtagaacttgcagaggataggcactggagagtc 1399 Query: 241 cgccttgcaataatagagtacatccc 266 || ||||||||||| ||||||||||| Sbjct: 1400 cggcttgcaataattgagtacatccc 1425
>gb|BT016833.1| Zea mays clone Contig666 mRNA sequence Length = 1277 Score = 224 bits (113), Expect = 1e-55 Identities = 235/275 (85%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| |||||||| || ||||| || ||||||| |||| ||||| |||| |||||| Sbjct: 372 atgttcgttcagctttagcctcagtcattatgggaa-tggctcctgtactgggaaaggat 430 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| |||| |||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 431 gctaccatggaacagcttcttccaatttttctctctttgctgaaggatgaatttccagat 490 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 491 gttcggcttaacataatcagcaagcttgatcaggttaatcaggttattggcattgacttt 550 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 | || ||| | || |||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 551 ttatcccaaacactgctaccagccattgtagaacttgcagaggataggcactggagagtc 610 Query: 241 cgccttgcaataatagagtacatccctctgctggc 275 || ||||||||||| ||||||||||| ||||||| Sbjct: 611 cggcttgcaataattgagtacatcccattgctggc 645
>gb|AY103751.1| Zea mays PCO067871 mRNA sequence Length = 2061 Score = 224 bits (113), Expect = 1e-55 Identities = 235/275 (85%), Gaps = 1/275 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 ||||||| |||||||| || ||||| || ||||||| |||| ||||| |||| |||||| Sbjct: 1056 atgttcgttcagctttagcctcagtcattatgggaa-tggctcctgtactgggaaaggat 1114 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 |||||||| |||| |||||||| |||||||| |||||||||||||| |||||||| ||| Sbjct: 1115 gctaccatggaacagcttcttccaatttttctctctttgctgaaggatgaatttccagat 1174 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||||| || ||||||||||||||||||||||| ||||||||||| ||||| |||||||| Sbjct: 1175 gttcggcttaacataatcagcaagcttgatcaggttaatcaggttattggcattgacttt 1234 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 | || ||| | || |||| || |||||||||||||| ||||||||||| ||||| || Sbjct: 1235 ttatcccaaacactgctaccagccattgtagaacttgcagaggataggcactggagagtc 1294 Query: 241 cgccttgcaataatagagtacatccctctgctggc 275 || ||||||||||| ||||||||||| ||||||| Sbjct: 1295 cggcttgcaataattgagtacatcccattgctggc 1329
>emb|X97913.1|NTPP2A N.tabacum mRNA for protein phosphatase 2A, 65kD regulatory subunit Length = 2153 Score = 155 bits (78), Expect = 9e-35 Identities = 209/252 (82%), Gaps = 1/252 (0%) Strand = Plus / Plus Query: 12 gctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcna 71 ||||||||||| || || ||||| | |||| ||||| ||||| |||||||| ||||| | Sbjct: 1116 gctttggcttctgttataatgggga-tggctcctgttttgggaaaggatgcaaccattga 1174 Query: 72 acaacttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaa 131 ||| |||||||| || |||||||| | ||||||||||| ||||||||||| || | || Sbjct: 1175 acatcttcttccaatatttctttcccttctgaaggacgagtttcctgatgtgcgcttgaa 1234 Query: 132 cataatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatc 191 ||| || ||||||||||||||||| |||||||| ||||| ||||| || | || ||||| Sbjct: 1235 catcattagcaagcttgatcaagtcaatcaggtgattgggattgatttattatcccaatc 1294 Query: 192 tctattaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaat 251 ||||||||| |||||||| || || || ||||| ||||||||| | || || |||||||| Sbjct: 1295 tctattaccagctattgttgagctggcagaggacaggcattggcgagtccgtcttgcaat 1354 Query: 252 aatagagtacat 263 |||||| ||||| Sbjct: 1355 aatagaatacat 1366
>emb|AJ243829.1|OSA243829 Oryza sativa RPA gene for protein phosphatase 2A A subunit, exons 1-12 Length = 6096 Score = 147 bits (74), Expect = 2e-32 Identities = 100/109 (91%) Strand = Plus / Plus Query: 56 aggatgctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttc 115 |||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 3025 aggaggctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttc 3084 Query: 116 ctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 |||||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 3085 ctgatgttcggctcaatataatcagcaagctcgatcaagttaatcaggt 3133 Score = 121 bits (61), Expect = 1e-24 Identities = 94/105 (89%) Strand = Plus / Plus Query: 159 tcaggtcattggaattgacttgctgtcgcaatctctattaccggctattgtagaacttgc 218 |||||| ||||||||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 3509 tcaggttattggaattgatttgctgtcacaatcactgttaccggcgatcgtagaacttgc 3568 Query: 219 ggaggataggcattggagggttcgccttgcaataatagagtacat 263 ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 3569 agaggataggcactggagggttcggcttgcaataattgagtacat 3613 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaagg 58 ||||||| ||||||||||||||||| || ||||| ||||||||| |||||||| |||| Sbjct: 2829 atgttcgttcagctttggcttcagttattatggg-aatggccccggtcttgggaaagg 2885
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 147 bits (74), Expect = 2e-32 Identities = 100/109 (91%) Strand = Plus / Minus Query: 56 aggatgctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttc 115 |||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 3706597 aggaggctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttc 3706538 Query: 116 ctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 |||||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 3706537 ctgatgttcggctcaatataatcagcaagctcgatcaagttaatcaggt 3706489 Score = 121 bits (61), Expect = 1e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 159 tcaggtcattggaattgacttgctgtcgcaatctctattaccggctattgtagaacttgc 218 |||||| ||||||||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 3706113 tcaggttattggaattgatttgctgtcacaatcactgttaccggcgatcgtagaacttgc 3706054 Query: 219 ggaggataggcattggagggttcgccttgcaataatagagtacat 263 ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 3706053 agaggataggcactggagggttcggcttgcaataattgagtacat 3706009 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaagg 58 ||||||| ||||||||||||||||| || ||||| ||||||||| |||||||| |||| Sbjct: 3706793 atgttcgttcagctttggcttcagttattatggg-aatggccccggtcttgggaaagg 3706737 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagcttgatcaagttaatca 161 |||||||||||||||||||| Sbjct: 2596242 aagcttgatcaagttaatca 2596223
>dbj|AP005578.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1695_A02 Length = 156214 Score = 147 bits (74), Expect = 2e-32 Identities = 100/109 (91%) Strand = Plus / Minus Query: 56 aggatgctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttc 115 |||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 114858 aggaggctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttc 114799 Query: 116 ctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 |||||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 114798 ctgatgttcggctcaatataatcagcaagctcgatcaagttaatcaggt 114750 Score = 121 bits (61), Expect = 1e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 159 tcaggtcattggaattgacttgctgtcgcaatctctattaccggctattgtagaacttgc 218 |||||| ||||||||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 114374 tcaggttattggaattgatttgctgtcacaatcactgttaccggcgatcgtagaacttgc 114315 Query: 219 ggaggataggcattggagggttcgccttgcaataatagagtacat 263 ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 114314 agaggataggcactggagggttcggcttgcaataattgagtacat 114270 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaagg 58 ||||||| ||||||||||||||||| || ||||| ||||||||| |||||||| |||| Sbjct: 115054 atgttcgttcagctttggcttcagttattatggg-aatggccccggtcttgggaaagg 114998
>dbj|AP005553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_H10 Length = 101054 Score = 147 bits (74), Expect = 2e-32 Identities = 100/109 (91%) Strand = Plus / Minus Query: 56 aggatgctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttc 115 |||| ||||| ||| ||||||||||||||||||| ||||||||||| ||||| ||||||| Sbjct: 13899 aggaggctacaatcgaacaacttcttcctattttcctttctttgctcaaggatgaatttc 13840 Query: 116 ctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 |||||||||| ||||| |||||||||||||| ||||||||||||||||| Sbjct: 13839 ctgatgttcggctcaatataatcagcaagctcgatcaagttaatcaggt 13791 Score = 121 bits (61), Expect = 1e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 159 tcaggtcattggaattgacttgctgtcgcaatctctattaccggctattgtagaacttgc 218 |||||| ||||||||||| |||||||| ||||| || |||||||| || ||||||||||| Sbjct: 13415 tcaggttattggaattgatttgctgtcacaatcactgttaccggcgatcgtagaacttgc 13356 Query: 219 ggaggataggcattggagggttcgccttgcaataatagagtacat 263 ||||||||||| ||||||||||| ||||||||||| |||||||| Sbjct: 13355 agaggataggcactggagggttcggcttgcaataattgagtacat 13311 Score = 61.9 bits (31), Expect = 1e-06 Identities = 52/58 (89%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaagg 58 ||||||| ||||||||||||||||| || ||||| ||||||||| |||||||| |||| Sbjct: 14095 atgttcgttcagctttggcttcagttattatggg-aatggccccggtcttgggaaagg 14039
>emb|AJ131045.1|CAR131045 Cicer arietinum mRNA for protein phosphatase Length = 1776 Score = 141 bits (71), Expect = 1e-30 Identities = 211/257 (82%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 |||||||||| || ||||||||||| || ||||||| |||| || ||||| ||||||||| Sbjct: 855 atgttcgctctgcattggcttcagttataatgggaa-tggcaccagtcttagggaaggat 913 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 || || || | ||||| ||||||||||| || ||| | |||| || || ||||||||| Sbjct: 914 gcaacaattgagcaactgcttcctattttcctctctcttttgaaagatgagtttcctgat 973 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 ||| | || || || |||||||||||||||||||| || ||||| ||||| |||||| || Sbjct: 974 gttaggctaaatattatcagcaagcttgatcaagtgaaccaggttattggtattgacctg 1033 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 | || ||||| |||||||| |||||||| || ||||| |||||| |||| ||||| ||| Sbjct: 1034 ttatctcaatcgctattaccagctattgttgagcttgctgaggatcggcactggagagtt 1093 Query: 241 cgccttgcaataataga 257 | |||||||| ||||| Sbjct: 1094 agacttgcaatcataga 1110
>gb|BT018352.1| Zea mays clone EL01T0403G07.c mRNA sequence Length = 830 Score = 135 bits (68), Expect = 8e-29 Identities = 103/115 (89%) Strand = Plus / Plus Query: 50 tggggaaggatgctaccatcnaacaacttcttcctatttttctttctttgctgaaggacg 109 |||| |||||||||||||| |||| ||| |||| ||||| || |||||| |||| |||| Sbjct: 19 tgggaaaggatgctaccattgaacagcttgttccaattttcctctctttgttgaaagacg 78 Query: 110 aatttcctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 ||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 79 aatttcctgatgttcgacttaacataatcagcaaacttgatcaagttaatcaggt 133
>gb|AF196286.1|AF196286 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit alpha isoform mRNA, complete cds Length = 2146 Score = 133 bits (67), Expect = 3e-28 Identities = 201/245 (82%), Gaps = 1/245 (0%) Strand = Plus / Plus Query: 16 tggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaacaa 75 |||||||||| || ||||||| |||| ||||| || || ||||| || || || | || Sbjct: 1186 tggcttcagtaataatgggaa-tggctcctgtgttaggaaaggaagcaacaatagagcag 1244 Query: 76 cttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacata 135 ||||||| |||||| || || | |||||||| |||||||| || || || | ||||| Sbjct: 1245 cttcttcatattttcctatcccttctgaaggatgaatttccagacgtgcgcataaacatc 1304 Query: 136 atcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctcta 195 |||||||||||||||||||| |||||||| |||||||| || || | || |||||| || Sbjct: 1305 atcagcaagcttgatcaagtgaatcaggttattggaatcgatctgttatctcaatcttta 1364 Query: 196 ttaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataata 255 ||||| || ||||| || ||||||||||||||||||||||| ||||| |||||||| ||| Sbjct: 1365 ttaccagccattgttgagcttgcggaggataggcattggagagttcggcttgcaattata 1424 Query: 256 gagta 260 ||||| Sbjct: 1425 gagta 1429
>gb|AF196287.1|AF196287 Medicago sativa subsp. x varia Ser/Thr specific protein phosphatase 2A A regulatory subunit beta isoform mRNA, complete cds Length = 2163 Score = 109 bits (55), Expect = 5e-21 Identities = 207/257 (80%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 |||||||||| || |||||||||| || ||||||| |||| || |||||||||||||| Sbjct: 1168 atgttcgctctgcactggcttcagttataatgggaa-tggcaccagtcttggggaaggac 1226 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 || || || | |||||||| |||||||| || ||| | |||| ||||| ||||||||| Sbjct: 1227 gcgacaattgagcaacttctccctattttcctctctcttttgaaagacgagtttcctgat 1286 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 || | || || || || ||||||||||||||||| || ||||| ||||| ||||| || Sbjct: 1287 gtcaggctaaatatcattagcaagcttgatcaagtgaaccaggttattggtattgatctg 1346 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 | || || || |||||||| |||||||| || ||||| |||||| |||| ||||| ||| Sbjct: 1347 ttatctcagtcgctattaccagctattgttgagcttgctgaggatcggcactggagagtt 1406 Query: 241 cgccttgcaataataga 257 | |||||||| ||||| Sbjct: 1407 agacttgcaatcataga 1423
>ref|NM_102360.2| Arabidopsis thaliana RCN1 (ROOTS CURL IN NPA); protein phosphatase type 2A regulator AT1G25490 (RCN1) mRNA, complete cds Length = 2086 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 1201 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 1260 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 1261 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 1320 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 1321 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 1376
>gb|BT000108.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 1861 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 1084 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 1143 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 1144 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 1203 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 1204 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 1259
>gb|AY120757.1| Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (At1g25490) mRNA, complete cds Length = 2035 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 1201 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 1260 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 1261 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 1320 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 1321 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 1376
>dbj|AK222057.1| Arabidopsis thaliana mRNA for phosphoprotein phosphatase 2A regulatory subunit A, partial cds, clone: RAFL22-79-F11 Length = 1136 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 292 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 351 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 352 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 411 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 412 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 467
>gb|U21557.1|ATU21557 Arabidopsis thaliana phosphoprotein phosphatase 2A regulatory subunit A (RCN1) mRNA, complete cds Length = 1993 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 1162 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 1221 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 1222 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 1281 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 1282 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 1337
>gb|U27299.1|ATU27299 Arabidopsis thaliana serine/threonine protein phosphatase type 2A regulatory subunit A mRNA, complete cds Length = 2020 Score = 103 bits (52), Expect = 3e-19 Identities = 145/176 (82%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 1178 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 1237 Query: 145 cttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctctattaccggct 204 | |||||||| || ||||| ||||||||||| | || || ||||| | |||||||| Sbjct: 1238 ttagatcaagtcaaccaggttattggaattgatctactatctcaatccttgttaccggcc 1297 Query: 205 attgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagta 260 |||||||||||||| |||||| |||| ||||| || || ||||||||||||||||| Sbjct: 1298 attgtagaacttgctgaggatcggcactggagagtccgacttgcaataatagagta 1353
>gb|AY111023.1| Zea mays CL9687_1 mRNA sequence Length = 1320 Score = 101 bits (51), Expect = 1e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 115 cctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaatt 174 |||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||||||| Sbjct: 1087 cctgatgttcgactcaacattataagcaaacttgatcaagttaaccaggttattggaatt 1028 Query: 175 gacttgctgtc 185 ||||||||||| Sbjct: 1027 gacttgctgtc 1017 Score = 40.1 bits (20), Expect = 3.7 Identities = 50/59 (84%), Gaps = 1/59 (1%) Strand = Plus / Minus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaagga 59 ||||||| ||||||||||| || || || ||||| |||||| ||||| ||||| ||||| Sbjct: 1200 atgttcgttcagctttggcatcggttattatggg-aatggctcctgtattgggaaagga 1143
>emb|Z25888.1|PSPP2A65K P.sativum mRNA For phosphoprotein phosphatase 2A 65 kDa regulatory subunit Length = 1367 Score = 85.7 bits (43), Expect = 7e-14 Identities = 204/257 (79%), Gaps = 1/257 (0%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaaatggcccctgtcttggggaaggat 60 |||||||||| || ||||||| || || ||||||| |||| || ||||| ||||||||| Sbjct: 422 atgttcgctccgcactggcttcggttataatgggaa-tggcaccggtcttagggaaggat 480 Query: 61 gctaccatcnaacaacttcttcctatttttctttctttgctgaaggacgaatttcctgat 120 || || || | |||||||| |||||||| || ||| | |||| ||||| ||||||||| Sbjct: 481 gcaacaattgagcaacttctccctattttcctctctcttttgaaagacgagtttcctgat 540 Query: 121 gttcgactcaacataatcagcaagcttgatcaagttaatcaggtcattggaattgacttg 180 || | || || || |||||||||||||||||||| || ||||| ||||| ||||| | Sbjct: 541 gtcaggctaaatattatcagcaagcttgatcaagtgaaccaggttattggtattgatctc 600 Query: 181 ctgtcgcaatctctattaccggctattgtagaacttgcggaggataggcattggagggtt 240 | || || || || ||||| ||||| || || ||||| |||||| |||| ||||| ||| Sbjct: 601 ttatctcagtcgcttttaccagctatcgttgagcttgctgaggatcggcactggagagtt 660 Query: 241 cgccttgcaataataga 257 | |||||||| ||||| Sbjct: 661 agacttgcaatcataga 677
>ref|NM_101203.3| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.1 mRNA, complete cds Length = 2033 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1104 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1162 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 1163 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 1222 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 1223 tatcagcaaacttgaccaagtgaaccaggttattgggattga 1264
>ref|NM_001035958.1| Arabidopsis thaliana PDF2; protein phosphatase type 2A regulator AT1G13320 (PDF2) transcript variant AT1G13320.2 mRNA, complete cds Length = 2073 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1105 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1163 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 1164 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 1223 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 1224 tatcagcaaacttgaccaagtgaaccaggttattgggattga 1265
>emb|X82003.1|AT65KPDF2 A.thaliana mRNA for 65kDa regulatory subunit of protein phosphatase 2A Length = 1685 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 778 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 836 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 837 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 896 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 897 tatcagcaaacttgaccaagtgaaccaggttattgggattga 938
>gb|AY099760.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1996 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1104 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1162 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 1163 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 1222 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 1223 tatcagcaaacttgaccaagtgaaccaggttattgggattga 1264
>emb|BX815351.1|CNS0AE48 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS54ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1957 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1077 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1135 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 1136 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 1195 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 1196 tatcagcaaacttgaccaagtgaaccaggttattgggattga 1237
>gb|BT002601.1| Arabidopsis thaliana protein phosphatase 2A regulatory subunit, putative (At1g13320) mRNA, complete cds Length = 1794 Score = 79.8 bits (40), Expect = 4e-12 Identities = 132/162 (81%), Gaps = 1/162 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1015 ttggcatcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1073 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 1074 tcttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacat 1133 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattga 176 |||||||| ||||| ||||| || ||||| ||||| ||||| Sbjct: 1134 tatcagcaaacttgaccaagtgaaccaggttattgggattga 1175
>gb|DQ323045.1| Phaseolus vulgaris clone BAC-71F18, complete sequence Length = 157468 Score = 79.8 bits (40), Expect = 4e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 73 caacttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaac 132 |||||||| |||||||| |||||| | |||| ||||||||||||||||| | || || Sbjct: 145540 caacttctgcctattttcctttctcttttgaaagacgaatttcctgatgtaaggctaaat 145599 Query: 133 ataatcagcaagcttgatcaagttaatcaggt 164 || |||||||||||||||||||| |||||||| Sbjct: 145600 attatcagcaagcttgatcaagtgaatcaggt 145631
>emb|X82001.1|AT65KRP2A A.thaliana gene for 65 kDa regulatory subunit of protein phosphatase 2A Length = 4705 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 196 ttaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataata 255 |||||||| |||||||||||||| |||||| |||| ||||| || || |||||||||||| Sbjct: 2646 ttaccggccattgtagaacttgctgaggatcggcactggagagtccgacttgcaataata 2705 Query: 256 gagta 260 ||||| Sbjct: 2706 gagta 2710 Score = 40.1 bits (20), Expect = 3.7 Identities = 65/80 (81%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggacgaatttcctgatgttcgactcaacataatcagcaag 144 ||||||||||| | |||| || |||||||||||||| || || ||||| || |||||| Sbjct: 2450 atttttctttcccttttgaaagatgaatttcctgatgtgcgccttaacatcataagcaag 2509 Query: 145 cttgatcaagttaatcaggt 164 | |||||||| || ||||| Sbjct: 2510 ttagatcaagtcaaccaggt 2529
>gb|AC079281.4|AC079281 Arabidopsis thaliana chromosome 1 BAC F2J7 genomic sequence, complete sequence Length = 102540 Score = 73.8 bits (37), Expect = 3e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 196 ttaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataata 255 |||||||| |||||||||||||| |||||| |||| ||||| || || |||||||||||| Sbjct: 47366 ttaccggccattgtagaacttgctgaggatcggcactggagagtccgacttgcaataata 47307 Query: 256 gagta 260 ||||| Sbjct: 47306 gagta 47302 Score = 40.1 bits (20), Expect = 3.7 Identities = 47/56 (83%) Strand = Plus / Minus Query: 109 gaatttcctgatgttcgactcaacataatcagcaagcttgatcaagttaatcaggt 164 |||||||||||||| || || ||||| || |||||| | |||||||| || ||||| Sbjct: 47538 gaatttcctgatgtgcgccttaacatcataagcaagttagatcaagtcaaccaggt 47483
>emb|X82002.1|AT65KPDF1 A.thaliana mRNA for 65 kDa regulatory subunit of protein phosphatase 2A Length = 1842 Score = 69.9 bits (35), Expect = 4e-09 Identities = 199/253 (78%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1048 ttggcctcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1106 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 || ||||| || ||||||||| | |||| || || || || ||||| || || ||||| Sbjct: 1107 tctccttccaatctttctttctctattgaaagatgagttcccggatgtacggctgaacat 1166 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctct 194 |||||||| ||||| ||||| |||||||| ||||| ||||| | || || ||||| | Sbjct: 1167 tatcagcaaacttgaccaagtgaatcaggttattgggattgatctactatcacaatcctt 1226 Query: 195 attaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataat 254 || || ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct: 1227 gttgccagctattgtagaacttgctgaagatagacactggagagtaagacttgctataat 1286 Query: 255 agagtacatccct 267 ||||| |||||| Sbjct: 1287 cgagtatatccct 1299
>dbj|AP006422.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT33E11, TM0310b, complete sequence Length = 93261 Score = 63.9 bits (32), Expect = 3e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 190 tctctattaccggctattgtagaacttgcggaggataggcattggagggttcgccttgca 249 ||||| ||||| |||||||| || ||||| ||||||||||||||||| ||||| ||||| Sbjct: 74964 tctctgttaccagctattgttgagcttgctgaggataggcattggagagttcgacttgct 75023 Query: 250 ataataga 257 || ||||| Sbjct: 75024 atcataga 75031 Score = 56.0 bits (28), Expect = 6e-05 Identities = 76/92 (82%) Strand = Plus / Plus Query: 73 caacttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaac 132 |||||||| |||||||| |||||| | |||| || || ||||||||||| | || || Sbjct: 74734 caacttctccctattttcctttctcttttgaaagatgagtttcctgatgtcaggctaaat 74793 Query: 133 ataatcagcaagcttgatcaagttaatcaggt 164 || |||||||||||||||||||| || ||||| Sbjct: 74794 attatcagcaagcttgatcaagtgaaccaggt 74825 Score = 46.1 bits (23), Expect = 0.059 Identities = 35/39 (89%) Strand = Plus / Plus Query: 214 cttgcggaggataggcattggagggttcgccttgcaata 252 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 79622 cttgcagaggaaaggcattggagagttcgacttgcaata 79660 Score = 42.1 bits (21), Expect = 0.92 Identities = 32/36 (88%) Strand = Plus / Plus Query: 1 atgttcgctcagctttggcttcagtnatcatgggaa 36 |||||||||| || ||||||||||| || ||||||| Sbjct: 74328 atgttcgctctgcattggcttcagttataatgggaa 74363
>ref|NM_113479.2| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.1 mRNA, complete cds Length = 2087 Score = 61.9 bits (31), Expect = 1e-06 Identities = 198/253 (78%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1114 ttggcctcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1172 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 || ||||| || ||||||||| | |||| || || || || ||||| || | ||||| Sbjct: 1173 tctccttccaatctttctttctctattgaaagatgagttcccggatgtacgcttgaacat 1232 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctct 194 |||||||| ||||| ||||| |||||||| ||||| ||||| | || || ||||| | Sbjct: 1233 tatcagcaaacttgaccaagtgaatcaggttattgggattgatctactatcacaatcctt 1292 Query: 195 attaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataat 254 || || ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct: 1293 gttgccagctattgtagaacttgctgaagatagacactggagagtaagacttgctataat 1352 Query: 255 agagtacatccct 267 ||||| |||||| Sbjct: 1353 cgagtatatccct 1365
>ref|NM_001035692.1| Arabidopsis thaliana PDF1; protein phosphatase type 2A regulator AT3G25800 (PDF1) transcript variant AT3G25800.2 mRNA, complete cds Length = 2099 Score = 61.9 bits (31), Expect = 1e-06 Identities = 198/253 (78%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1114 ttggcctcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1172 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 || ||||| || ||||||||| | |||| || || || || ||||| || | ||||| Sbjct: 1173 tctccttccaatctttctttctctattgaaagatgagttcccggatgtacgcttgaacat 1232 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctct 194 |||||||| ||||| ||||| |||||||| ||||| ||||| | || || ||||| | Sbjct: 1233 tatcagcaaacttgaccaagtgaatcaggttattgggattgatctactatcacaatcctt 1292 Query: 195 attaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataat 254 || || ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct: 1293 gttgccagctattgtagaacttgctgaagatagacactggagagtaagacttgctataat 1352 Query: 255 agagtacatccct 267 ||||| |||||| Sbjct: 1353 cgagtatatccct 1365
>gb|BT008356.1| Arabidopsis thaliana At3g25800 gene, complete cds Length = 1764 Score = 61.9 bits (31), Expect = 1e-06 Identities = 198/253 (78%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1015 ttggcctcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1073 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 || ||||| || ||||||||| | |||| || || || || ||||| || | ||||| Sbjct: 1074 tctccttccaatctttctttctctattgaaagatgagttcccggatgtacgcttgaacat 1133 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctct 194 |||||||| ||||| ||||| |||||||| ||||| ||||| | || || ||||| | Sbjct: 1134 tatcagcaaacttgaccaagtgaatcaggttattgggattgatctactatcacaatcctt 1193 Query: 195 attaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataat 254 || || ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct: 1194 gttgccagctattgtagaacttgctgaagatagacactggagagtaagacttgctataat 1253 Query: 255 agagtacatccct 267 ||||| |||||| Sbjct: 1254 cgagtatatccct 1266
>gb|BT002488.1| Arabidopsis thaliana protein phosphatase 2A 65 kDa regulatory subunit (At3g25800) mRNA, complete cds Length = 2061 Score = 61.9 bits (31), Expect = 1e-06 Identities = 198/253 (78%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 15 ttggcttcagtnatcatgggaaatggcccctgtcttggggaaggatgctaccatcnaaca 74 ||||| ||||| || ||||||| |||| || |||||||| |||||||| || || | || Sbjct: 1114 ttggcctcagttataatgggaa-tggctccagtcttgggtaaggatgcaacaattgagca 1172 Query: 75 acttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacat 134 || ||||| || ||||||||| | |||| || || || || ||||| || | ||||| Sbjct: 1173 tctccttccaatctttctttctctattgaaagatgagttcccggatgtacgcttgaacat 1232 Query: 135 aatcagcaagcttgatcaagttaatcaggtcattggaattgacttgctgtcgcaatctct 194 |||||||| ||||| ||||| |||||||| ||||| ||||| | || || ||||| | Sbjct: 1233 tatcagcaaacttgaccaagtgaatcaggttattgggattgatctactatcacaatcctt 1292 Query: 195 attaccggctattgtagaacttgcggaggataggcattggagggttcgccttgcaataat 254 || || ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| Sbjct: 1293 gttgccagctattgtagaacttgctgaagatagacactggagagtaagacttgctataat 1352 Query: 255 agagtacatccct 267 ||||| |||||| Sbjct: 1353 cgagtatatccct 1365
>gb|AC011810.8|AC011810 Arabidopsis thaliana chromosome I BAC T6J4 genomic sequence, complete sequence Length = 103157 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 76 cttcttcctatttttctttctttgctgaaggacgaatttcctgatgttcgactcaacata 135 |||||||| || ||||||||| | |||| ||||||||||||||||| || | ||||| Sbjct: 43059 cttcttccaatctttctttctctattgaaagacgaatttcctgatgtacgcttaaacatt 43000 Query: 136 atcagcaagcttgatcaagttaatcaggt 164 |||||||| ||||| ||||| || ||||| Sbjct: 42999 atcagcaaacttgaccaagtgaaccaggt 42971
>gb|AC131720.2| Mus musculus BAC clone RP23-137I3 from chromosome 10, complete sequence Length = 207949 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ttcttcctatttttctttcttt 98 |||||||||||||||||||||| Sbjct: 97278 ttcttcctatttttctttcttt 97299
>gb|AC125201.4| Mus musculus BAC clone RP23-224O3 from 14, complete sequence Length = 189542 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttcttt 98 |||||||||||||||||||||| Sbjct: 13841 ttcttcctatttttctttcttt 13820
>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete sequence Length = 395229 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttcttt 98 |||||||||||||||||||||| Sbjct: 99021 ttcttcctatttttctttcttt 99000
>dbj|AB028607.1| Arabidopsis thaliana genomic DNA, chromosome 3, TAC clone:K13N2 Length = 77483 Score = 44.1 bits (22), Expect = 0.23 Identities = 55/66 (83%) Strand = Plus / Minus Query: 202 gctattgtagaacttgcggaggataggcattggagggttcgccttgcaataatagagtac 261 ||||||||||||||||| || ||||| || ||||| || | ||||| ||||| ||||| Sbjct: 60452 gctattgtagaacttgctgaagatagacactggagagtaagacttgctataatcgagtat 60393 Query: 262 atccct 267 |||||| Sbjct: 60392 atccct 60387
>emb|BX276123.6| Mouse DNA sequence from clone RP23-220O6 on chromosome X, complete sequence Length = 84821 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 77 ttcttcctatttttctttcttt 98 |||||||||||||||||||||| Sbjct: 14421 ttcttcctatttttctttcttt 14442
>gb|BC107737.1| Homo sapiens cDNA clone MGC:104506 IMAGE:4839525, complete cds Length = 2194 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttctttgct 101 |||||||| |||||||||||||||| Sbjct: 1418 ttcttcctgtttttctttctttgct 1394
>emb|AL356415.26| Human DNA sequence from clone RP3-337D23 on chromosome 6q23.3-25.3 Contains the 5' end of tomosyn (LOC134957) (contains FLJ30922), part of a putative novel gene, a putative novel gene and a CpG island, complete sequence Length = 140999 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 77 ttcttcctatttttctttctttgct 101 |||||||| |||||||||||||||| Sbjct: 7093 ttcttcctgtttttctttctttgct 7117
>emb|AL109801.14|HSJ738A13 Human DNA sequence from clone RP4-738A13 on chromosome Xq21.31-22.1 Contains the 5' end of the TAF7L gene for TAF7-like RNA polymerase II 50kDa TATA box binding protein (TBP)-associated factor and a CpG island, complete sequence Length = 46775 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 tcttcctatttttctttcttt 98 ||||||||||||||||||||| Sbjct: 11849 tcttcctatttttctttcttt 11829
>gb|AC103987.5| Homo sapiens chromosome 18, clone RP11-268I9, complete sequence Length = 163972 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 78 tcttcctatttttctttcttt 98 ||||||||||||||||||||| Sbjct: 123054 tcttcctatttttctttcttt 123074
>gb|AC023722.4| Drosophila melanogaster X BAC RP98-48O24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 191590 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttctt 97 ||||||||||||||||||||| Sbjct: 100469 ttcttcctatttttctttctt 100449
>gb|AC026729.5| Homo sapiens chromosome 5 clone CTD-2288A4, complete sequence Length = 113066 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cttcctatttttctttctttg 99 ||||||||||||||||||||| Sbjct: 24157 cttcctatttttctttctttg 24137
>gb|AC008710.5| Homo sapiens chromosome 5 clone CTB-7E3, complete sequence Length = 132521 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 cttcctatttttctttctttg 99 ||||||||||||||||||||| Sbjct: 95648 cttcctatttttctttctttg 95628
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttctt 97 ||||||||||||||||||||| Sbjct: 246460 ttcttcctatttttctttctt 246440
>gb|AY377429.1| Danio rerio zinc finger transcription factor Gli3 (gli3) mRNA, complete cds Length = 5086 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aagcttgatcaagttaatca 161 |||||||||||||||||||| Sbjct: 4613 aagcttgatcaagttaatca 4632
>gb|AC004227.1| Homo sapiens chromosome 5, P1 clone 356a8 (LBNL H32), complete sequence Length = 72941 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tatttttctttctttgctga 103 |||||||||||||||||||| Sbjct: 52887 tatttttctttctttgctga 52868
>gb|AC111126.16| Mus musculus chromosome 5, clone RP23-336F4, complete sequence Length = 236880 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ttcttcctatttttctttct 96 |||||||||||||||||||| Sbjct: 186016 ttcttcctatttttctttct 186035
>gb|AC137104.11| Mus musculus chromosome 1, clone RP23-241K20, complete sequence Length = 171622 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 tttttctttctttgctgaag 105 |||||||||||||||||||| Sbjct: 133739 tttttctttctttgctgaag 133758
>gb|AC147337.3| Pan troglodytes BAC clone CH251-104M9 from Y, complete sequence Length = 168027 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 87800 cttcctatttttctttcttt 87819
>gb|AC115738.9| Mus musculus chromosome 3, clone RP23-474P24, complete sequence Length = 188507 Score = 40.1 bits (20), Expect = 3.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 74 aacttcttcctatttttctttctttgct 101 ||||||||||||| || ||||||||||| Sbjct: 97866 aacttcttcctatcttgctttctttgct 97893
>gb|AC146215.2| Pan troglodytes BAC clone CH251-299B14 from Y, complete sequence Length = 163780 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 12602 cttcctatttttctttcttt 12621
>gb|DQ485452.1| Homo sapiens protein kinase D1 (PRKD1) gene, complete cds Length = 355200 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 75 acttcttcctatttttctttcttt 98 |||||||||||||||| ||||||| Sbjct: 258041 acttcttcctatttttttttcttt 258064
>gb|AC116489.6| Mus musculus chromosome 18, clone RP24-137L16, complete sequence Length = 198242 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 cttcttcctatttttctttc 95 |||||||||||||||||||| Sbjct: 125895 cttcttcctatttttctttc 125914
>gb|AY228106.1| Petunia vein clearing virus, proviral sequence Length = 16933 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 tcagcaagcttgatcaagttaatc 160 |||||||| ||||||||||||||| Sbjct: 9837 tcagcaagtttgatcaagttaatc 9860
>gb|AY333912.1| Petunia x hybrida clone 4 integrated petunia vein clearing virus, partial sequence Length = 11425 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 tcagcaagcttgatcaagttaatc 160 |||||||| ||||||||||||||| Sbjct: 11132 tcagcaagtttgatcaagttaatc 11155
>emb|AL391827.18| Human DNA sequence from clone RP11-63G20 on chromosome 10 Contains the 5' end of a novel gene (FLJ13114 FLJ40653) and two CpG islands, complete sequence Length = 183430 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcttcctatttttctttctt 97 |||||||||||||||||||| Sbjct: 148641 tcttcctatttttctttctt 148622
>ref|XM_504837.1| Yarrowia lipolytica CLIB122, YALI0F00836g predicted mRNA Length = 1869 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gagtacatccctctgctggc 275 |||||||||||||||||||| Sbjct: 1327 gagtacatccctctgctggc 1346
>emb|AL161719.21| Human DNA sequence from clone RP11-37L2 on chromosome 13, complete sequence Length = 102840 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 78 tcttcctatttttctttctt 97 |||||||||||||||||||| Sbjct: 57232 tcttcctatttttctttctt 57213
>emb|AL035660.16|HS300I2 Human DNA sequence from clone RP1-300I2 on chromosome 20q12-13.12 Contains a novel gene and the SLPI gene for secretory leukocyte protease inhibitor (antileukoproteinase), complete sequence Length = 63796 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 56626 cttcctatttttctttcttt 56607
>gb|AC108451.9| Homo sapiens chromosome 15, clone RP11-379K22, complete sequence Length = 198707 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 acttcttcctatttttctttcttt 98 |||||||||| ||||||||||||| Sbjct: 783 acttcttcctttttttctttcttt 760
>dbj|BS000598.1| Pan troglodytes chromosome Y clone:PTB-224I01, complete sequences Length = 153754 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 41273 cttcctatttttctttcttt 41292
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 22295384 cttcctatttttctttcttt 22295365
>dbj|AK093574.1| Homo sapiens cDNA FLJ36255 fis, clone THYMU2002177 Length = 1947 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 tatttttctttctttgctga 103 |||||||||||||||||||| Sbjct: 1799 tatttttctttctttgctga 1818
>gb|AC079327.3| Homo sapiens chromosome 18, clone RP11-240N5, complete sequence Length = 165642 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ttcctatttttctttctttg 99 |||||||||||||||||||| Sbjct: 32135 ttcctatttttctttctttg 32154
>gb|AC024621.8| Homo sapiens chromosome 18, clone RP11-425M2, complete sequence Length = 151162 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ttcctatttttctttctttg 99 |||||||||||||||||||| Sbjct: 3463 ttcctatttttctttctttg 3444
>gb|AC158558.6| Mus musculus chromosome 5, clone RP23-34P11, complete sequence Length = 171035 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ttcttcctatttttctttct 96 |||||||||||||||||||| Sbjct: 46509 ttcttcctatttttctttct 46528
>gb|U95208.2| Petunia vein clearing virus, complete genome Length = 7206 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 137 tcagcaagcttgatcaagttaatc 160 |||||||| ||||||||||||||| Sbjct: 5860 tcagcaagattgatcaagttaatc 5883
>gb|AC016705.4|AC016705 Homo sapiens BAC clone RP11-210M15 from 15, complete sequence Length = 177964 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 75 acttcttcctatttttctttcttt 98 |||||||||| ||||||||||||| Sbjct: 124908 acttcttcctttttttctttcttt 124885
>gb|AC073413.6| Homo sapiens BAC clone RP11-57B24 from 4, complete sequence Length = 183692 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ttcctatttttctttctttg 99 |||||||||||||||||||| Sbjct: 116134 ttcctatttttctttctttg 116153
>gb|AC011302.3|AC011302 Homo sapiens BAC clone RP11-333E9 from Y, complete sequence Length = 178137 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 cttcctatttttctttcttt 98 |||||||||||||||||||| Sbjct: 137074 cttcctatttttctttcttt 137093
>dbj|AP005583.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0406E03 Length = 201069 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagcttgatcaagttaatca 161 |||||||||||||||||||| Sbjct: 182832 aagcttgatcaagttaatca 182813
>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0006E02 Length = 141782 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 aagcttgatcaagttaatca 161 |||||||||||||||||||| Sbjct: 41520 aagcttgatcaagttaatca 41501
>emb|BX000520.12| Mouse DNA sequence from clone RP23-261N8 on chromosome X, complete sequence Length = 112153 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 85 atttttctttctttgctgaaggac 108 |||||||||||||||||| ||||| Sbjct: 100399 atttttctttctttgctgcaggac 100422
>emb|BX914207.15| Zebrafish DNA sequence from clone DKEY-158P11 in linkage group 4, complete sequence Length = 92140 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ttcctatttttctttctttg 99 |||||||||||||||||||| Sbjct: 65169 ttcctatttttctttctttg 65150
>emb|BX279523.5| Zebrafish DNA sequence from clone CH211-63O20 in linkage group 20, complete sequence Length = 165073 Score = 40.1 bits (20), Expect = 3.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 76 cttcttcctatttttctttctttg 99 ||||||||| |||||||||||||| Sbjct: 92557 cttcttcctttttttctttctttg 92534
>ref|NM_205728.1| Danio rerio GLI-Kruppel family member GLI3 (gli3), mRNA Length = 5086 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aagcttgatcaagttaatca 161 |||||||||||||||||||| Sbjct: 4613 aagcttgatcaagttaatca 4632
>gb|AC002210.1|AC002210 Homo sapiens (subclone 2_h1 from P1 H32) DNA sequence, complete sequence Length = 3915 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 tatttttctttctttgctga 103 |||||||||||||||||||| Sbjct: 3224 tatttttctttctttgctga 3205
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gagtacatccctctgctggc 275 |||||||||||||||||||| Sbjct: 130486 gagtacatccctctgctggc 130505
>gb|AC154248.2| Mus musculus BAC clone RP24-182I14 from chromosome 13, complete sequence Length = 188542 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttct 96 |||||||||||||||||||| Sbjct: 151774 ttcttcctatttttctttct 151755
>emb|AL358892.13| Mouse DNA sequence from clone RP21-417G6 on chromosome 5, complete sequence Length = 179132 Score = 40.1 bits (20), Expect = 3.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ttcttcctatttttctttct 96 |||||||||||||||||||| Sbjct: 123316 ttcttcctatttttctttct 123297 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,820,224 Number of Sequences: 3902068 Number of extensions: 3820224 Number of successful extensions: 72637 Number of sequences better than 10.0: 93 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 72419 Number of HSP's gapped (non-prelim): 208 length of query: 280 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 258 effective length of database: 17,147,199,772 effective search space: 4423977541176 effective search space used: 4423977541176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
