ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9b23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 194 3e-46
2gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genom... 117 5e-23
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 117 5e-23
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 117 5e-23
5emb|BX814846.1|CNS0ABII Arabidopsis thaliana Full-length cDNA Co... 48 0.038
6emb|BX814428.1|CNS0AC2Z Arabidopsis thaliana Full-length cDNA Co... 46 0.15
7gb|AY071823.1| Spermophilus tridecemlineatus unknown endogenous ... 44 0.59
8gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosom... 44 0.59
9gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, com... 44 0.59
10ref|NM_021589.1| Rattus norvegicus neurotrophic tyrosine kinase,... 42 2.3
11gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, com... 42 2.3
12gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57... 42 2.3
13gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57... 42 2.3
14gb|M85214.1|RATTRKPREC Rattus norvegicus trk precursor (trk) mRN... 42 2.3
15gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 42 2.3
16gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 ... 42 2.3
17ref|NM_191352.1| Oryza sativa (japonica cultivar-group), predic... 40 9.3
18gb|AC103646.6| Mus musculus chromosome 3, clone RP24-549G23, com... 40 9.3
19gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome ... 40 9.3
20gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, com... 40 9.3
21gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, com... 40 9.3
22gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome... 40 9.3
23ref|XM_983076.1| PREDICTED: Mus musculus fibroblast growth facto... 40 9.3
24ref|XM_485825.4| PREDICTED: Mus musculus fibroblast growth facto... 40 9.3
25ref|XM_001003439.1| PREDICTED: Mus musculus fibroblast growth fa... 40 9.3
26emb|BX927407.11| Zebrafish DNA sequence from clone CH211-67F24 i... 40 9.3
27gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosom... 40 9.3
28dbj|AB230043.1| Aspergillus oryzae cDNA, contig sequence: AoEST6930 40 9.3
29dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 40 9.3
30gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, a... 40 9.3
31gb|AC026784.5| Homo sapiens chromosome 5 clone CTD-2138O14, comp... 40 9.3
32dbj|AK086530.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 9.3
33gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, comp... 40 9.3
34dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
35dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.3
36emb|BX005442.10| Zebrafish DNA sequence from clone DKEY-88J15, c... 40 9.3
37emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chro... 40 9.3
38gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568... 40 9.3
39dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
40emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 ... 40 9.3
41dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.3
42gb|AY104313.1| Zea mays PCO093744 mRNA sequence 40 9.3
43emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2... 40 9.3
44gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 9.3
45emb|BX005189.9| Mouse DNA sequence from clone RP23-170L24 on chr... 40 9.3
46gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromoso... 40 9.3
47gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromoso... 40 9.3
48gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromoso... 40 9.3
49emb|AL772316.6| Mouse DNA sequence from clone RP23-19G2 on chrom... 40 9.3
50gb|M92416.1|MUSFGFAB Mus musculus fibroblast growth factor (Fgf6... 40 9.3
51dbj|AB032757.1| Mus musculus gad65 gene for glutamate decarboxyl... 40 9.3 
>dbj|AK071836.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023117P17, full
           insert sequence
          Length = 1475

 Score =  194 bits (98), Expect = 3e-46
 Identities = 172/196 (87%), Gaps = 3/196 (1%)
 Strand = Plus / Plus

                                                                       
Query: 272 gtcagctggatgtaaaccacaagaagcagccactacagacatccagaccttacaacattg 331
           ||||||||||||||||||||| |||||   |||| || || | |||||||||||||||||
Sbjct: 182 gtcagctggatgtaaaccacaggaagc---cacttcaaactttcagaccttacaacattg 238

                                                                       
Query: 332 cccacaggggttccaatggcgaaatacccgaagagacatctgcggcatacttgagggcta 391
           ||||||||||||||||||| |||||||||||||||||  | || || ||| |||||||||
Sbjct: 239 cccacaggggttccaatggtgaaatacccgaagagaccacggctgcctacctgagggcta 298

                                                                       
Query: 392 tcgaggaaggtgcagacttcatagagactgatatacttgcatcaaaggacgggcatctca 451
           | || ||||||||||||||||||||| |||| ||||||||| |||||||||| ||||| |
Sbjct: 299 ttgaagaaggtgcagacttcatagagtctgacatacttgcaacaaaggacggacatctga 358

                           
Query: 452 tatgttttcatgatgt 467
           ||||||| || |||||
Sbjct: 359 tatgtttccacgatgt 374



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 126/151 (83%), Gaps = 1/151 (0%)
 Strand = Plus / Plus

                                                                       
Query: 518 ggaagagaacctatgaagtccagggagcgaatatgactgggtggtttgtcgtggatttta 577
           |||||||||||||||||||  || ||   ||| |||| || |||||||| ||||||||||
Sbjct: 425 ggaagagaacctatgaagttgagagacaaaatgtgaccggctggtttgttgtggatttta 484

                                                                       
Query: 578 cactaagagaactgaaatcactgagggtgaaacagcgctatgatttcagggatcaacagt 637
           | ||   |||||| || ||||||||||||||||| |||||  |||||||||| |||||||
Sbjct: 485 ctcttgaagaactcaagtcactgagggtgaaacaacgctacaatttcagggaccaacagt 544

                                          
Query: 638 ataattgggaagtacgatattcttacatttg 668
           | || |||||||||| | ||| |||||||||
Sbjct: 545 acaa-tgggaagtaccagattattacatttg 574
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>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete
             sequence
          Length = 145590

 Score =  117 bits (59), Expect = 5e-23
 Identities = 88/97 (90%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                         
Query: 272   gtcagctggatgtaaaccacaagaagcagccactacagacatccagaccttacaacattg 331
             ||||||||||||||||||||| |||||   |||| || || | |||||||||||||||||
Sbjct: 19748 gtcagctggatgtaaaccacaggaagc---cacttcaaactttcagaccttacaacattg 19804

                                                  
Query: 332   cccacaggggttccaatggcgaaatacccgaagagac 368
             ||||||||||||||||||| |||||||||||||||||
Sbjct: 19805 cccacaggggttccaatggtgaaatacccgaagagac 19841



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                         
Query: 384   gagggctatcgaggaaggtgcagacttcatagagactgatatacttgcatcaaaggacgg 443
             ||||||||| || ||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 20182 gagggctattgaagaaggtgcagacttcatagagtctgacatacttgcaacaaaggacgg 20241

                                     
Query: 444   gcatctcatatgttttcatgatgt 467
              ||||| |||||||| || |||||
Sbjct: 20242 acatctgatatgtttccacgatgt 20265



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 568   gtggattttacactaagagaactgaaatcactgagggtgaaacagcgctatgatttcagg 627
             ||||||||||| ||   |||||| || ||||||||||||||||| |||||  ||||||||
Sbjct: 20458 gtggattttactcttgaagaactcaagtcactgagggtgaaacaacgctacaatttcagg 20517

                        
Query: 628   gatcaacagta 638
             || ||||||||
Sbjct: 20518 gaccaacagta 20528
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  117 bits (59), Expect = 5e-23
 Identities = 88/97 (90%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                            
Query: 272      gtcagctggatgtaaaccacaagaagcagccactacagacatccagaccttacaacattg 331
                ||||||||||||||||||||| |||||   |||| || || | |||||||||||||||||
Sbjct: 22424501 gtcagctggatgtaaaccacaggaagc---cacttcaaactttcagaccttacaacattg 22424557

                                                     
Query: 332      cccacaggggttccaatggcgaaatacccgaagagac 368
                ||||||||||||||||||| |||||||||||||||||
Sbjct: 22424558 cccacaggggttccaatggtgaaatacccgaagagac 22424594



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 384      gagggctatcgaggaaggtgcagacttcatagagactgatatacttgcatcaaaggacgg 443
                ||||||||| || ||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 22424935 gagggctattgaagaaggtgcagacttcatagagtctgacatacttgcaacaaaggacgg 22424994

                                        
Query: 444      gcatctcatatgttttcatgatgt 467
                 ||||| |||||||| || |||||
Sbjct: 22424995 acatctgatatgtttccacgatgt 22425018



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                            
Query: 568      gtggattttacactaagagaactgaaatcactgagggtgaaacagcgctatgatttcagg 627
                ||||||||||| ||   |||||| || ||||||||||||||||| |||||  ||||||||
Sbjct: 22425211 gtggattttactcttgaagaactcaagtcactgagggtgaaacaacgctacaatttcagg 22425270

                           
Query: 628      gatcaacagta 638
                || ||||||||
Sbjct: 22425271 gaccaacagta 22425281
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  117 bits (59), Expect = 5e-23
 Identities = 88/97 (90%), Gaps = 3/97 (3%)
 Strand = Plus / Plus

                                                                            
Query: 272      gtcagctggatgtaaaccacaagaagcagccactacagacatccagaccttacaacattg 331
                ||||||||||||||||||||| |||||   |||| || || | |||||||||||||||||
Sbjct: 22417530 gtcagctggatgtaaaccacaggaagc---cacttcaaactttcagaccttacaacattg 22417586

                                                     
Query: 332      cccacaggggttccaatggcgaaatacccgaagagac 368
                ||||||||||||||||||| |||||||||||||||||
Sbjct: 22417587 cccacaggggttccaatggtgaaatacccgaagagac 22417623



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 75/84 (89%)
 Strand = Plus / Plus

                                                                            
Query: 384      gagggctatcgaggaaggtgcagacttcatagagactgatatacttgcatcaaaggacgg 443
                ||||||||| || ||||||||||||||||||||| |||| ||||||||| ||||||||||
Sbjct: 22417964 gagggctattgaagaaggtgcagacttcatagagtctgacatacttgcaacaaaggacgg 22418023

                                        
Query: 444      gcatctcatatgttttcatgatgt 467
                 ||||| |||||||| || |||||
Sbjct: 22418024 acatctgatatgtttccacgatgt 22418047



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                            
Query: 568      gtggattttacactaagagaactgaaatcactgagggtgaaacagcgctatgatttcagg 627
                ||||||||||| ||   |||||| || ||||||||||||||||| |||||  ||||||||
Sbjct: 22418240 gtggattttactcttgaagaactcaagtcactgagggtgaaacaacgctacaatttcagg 22418299

                           
Query: 628      gatcaacagta 638
                || ||||||||
Sbjct: 22418300 gaccaacagta 22418310
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>emb|BX814846.1|CNS0ABII Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS10ZH05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1281

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 334 cacaggggttccaatggcgaaatacccgaagagacatctgcggcatacttgagggctatc 393
           ||||| ||||||||||| || || || ||||||||  | || ||||||||||| || || 
Sbjct: 177 cacagaggttccaatggagagatcccagaagagactacagctgcatacttgagagcaatt 236

                                           
Query: 394 gaggaaggtgcagacttcatagagactgatat 425
           || |||||  ||||||||||||| || |||||
Sbjct: 237 gaagaaggcacagacttcatagaaacagatat 268
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>emb|BX814428.1|CNS0AC2Z Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB73ZC12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1313

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 86/107 (80%)
 Strand = Plus / Plus

                                                                       
Query: 319 ccttacaacattgcccacaggggttccaatggcgaaatacccgaagagacatctgcggca 378
           ||||| ||||| || ||||| ||||||||||| || || || ||||| ||  | || |||
Sbjct: 205 ccttataacatcgcacacagaggttccaatggagagatcccagaagaaactacagctgca 264

                                                          
Query: 379 tacttgagggctatcgaggaaggtgcagacttcatagagactgatat 425
           |||||||| || || || |||||  ||||||||||||| || |||||
Sbjct: 265 tacttgagagcaattgaagaaggcacagacttcatagaaacagatat 311
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>gb|AY071823.1| Spermophilus tridecemlineatus unknown endogenous virus, complete
            sequence; and pancreatic triacylglycerol lipase (PTL)
            gene, partial cds, alternatively spliced
          Length = 9201

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 144  aggaggagaaggaaccaaggagggag 169
            ||||||||||||||| ||||||||||
Sbjct: 2402 aggaggagaaggaacaaaggagggag 2427
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>gb|AC162914.2| Mus musculus BAC clone RP23-401O13 from chromosome 6, complete sequence
          Length = 194892

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 145    ggaggagaaggaaccaaggagggagg 170
              |||||||||||||||| |||||||||
Sbjct: 137474 ggaggagaaggaaccagggagggagg 137499
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>gb|AC118245.17| Mus musculus chromosome 6, clone RP23-292C5, complete sequence
          Length = 230218

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 145  ggaggagaaggaaccaaggagggagg 170
            |||||||||||||||| |||||||||
Sbjct: 2181 ggaggagaaggaaccagggagggagg 2156
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>ref|NM_021589.1| Rattus norvegicus neurotrophic tyrosine kinase, receptor, type 1
           (Ntrk1), mRNA
          Length = 2633

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 244 gatgccaacccagctgcccgt 264
           |||||||||||||||||||||
Sbjct: 101 gatgccaacccagctgcccgt 81
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>gb|AC125019.6| Mus musculus chromosome 19, clone RP24-158H8, complete sequence
          Length = 162617

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 618    tgatttcagggatcaacagta 638
              |||||||||||||||||||||
Sbjct: 156196 tgatttcagggatcaacagta 156216
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>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone
              BACR13H23, complete sequence
          Length = 179139

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 93     ctctggcttcgactccgactccgat 117
              |||||||||||||||||| ||||||
Sbjct: 168862 ctctggcttcgactccgattccgat 168886
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>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone
            BACR34C17, complete sequence
          Length = 167447

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 93   ctctggcttcgactccgactccgat 117
            |||||||||||||||||| ||||||
Sbjct: 8161 ctctggcttcgactccgattccgat 8185
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>gb|M85214.1|RATTRKPREC Rattus norvegicus trk precursor (trk) mRNA, complete cds
          Length = 2633

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 244 gatgccaacccagctgcccgt 264
           |||||||||||||||||||||
Sbjct: 101 gatgccaacccagctgcccgt 81
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>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
              sequence
          Length = 313634

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 93     ctctggcttcgactccgactccgat 117
              |||||||||||||||||| ||||||
Sbjct: 158697 ctctggcttcgactccgattccgat 158721
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>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete
             sequence
          Length = 58663

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 93    ctctggcttcgactccgactccgat 117
             |||||||||||||||||| ||||||
Sbjct: 42957 ctctggcttcgactccgattccgat 42981
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>ref|NM_191352.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1176

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 tttcatgatgtaacactgga 476
           ||||||||||||||||||||
Sbjct: 268 tttcatgatgtaacactgga 287
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>gb|AC103646.6| Mus musculus chromosome 3, clone RP24-549G23, complete sequence
          Length = 130631

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 654   atattcttacatttggatga 673
             ||||||||||||||||||||
Sbjct: 32342 atattcttacatttggatga 32323
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>gb|AC163683.4| Mus musculus BAC clone RP23-8L20 from chromosome 6, complete sequence
          Length = 218138

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 570   ggattttacactaagagaac 589
             ||||||||||||||||||||
Sbjct: 96710 ggattttacactaagagaac 96729
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>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence
          Length = 159429

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 654   atattcttacatttggatga 673
             ||||||||||||||||||||
Sbjct: 97007 atattcttacatttggatga 97026
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>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence
          Length = 187598

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 654    atattcttacatttggatga 673
              ||||||||||||||||||||
Sbjct: 138622 atattcttacatttggatga 138641
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>gb|AC163747.4| Mus musculus BAC clone RP23-403P6 from chromosome 6, complete
            sequence
          Length = 185160

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 570  ggattttacactaagagaac 589
            ||||||||||||||||||||
Sbjct: 3681 ggattttacactaagagaac 3700
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>ref|XM_983076.1| PREDICTED: Mus musculus fibroblast growth factor 6 (Fgf6), mRNA
          Length = 4657

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ggattttacactaagagaac 589
           ||||||||||||||||||||
Sbjct: 677 ggattttacactaagagaac 696
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>ref|XM_485825.4| PREDICTED: Mus musculus fibroblast growth factor 6 (Fgf6), mRNA
          Length = 4657

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ggattttacactaagagaac 589
           ||||||||||||||||||||
Sbjct: 677 ggattttacactaagagaac 696
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>ref|XM_001003439.1| PREDICTED: Mus musculus fibroblast growth factor 6 (Fgf6), mRNA
          Length = 4661

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ggattttacactaagagaac 589
           ||||||||||||||||||||
Sbjct: 677 ggattttacactaagagaac 696
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>emb|BX927407.11| Zebrafish DNA sequence from clone CH211-67F24 in linkage group 13,
             complete sequence
          Length = 123739

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tctgataggaggagaaggaa 157
             ||||||||||||||||||||
Sbjct: 73423 tctgataggaggagaaggaa 73442
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>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete sequence
          Length = 202583

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 616    tatgatttcagggatcaaca 635
              ||||||||||||||||||||
Sbjct: 138761 tatgatttcagggatcaaca 138780
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>dbj|AB230043.1| Aspergillus oryzae cDNA, contig sequence: AoEST6930
          Length = 520

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 97  ggcttcgactccgactccga 116
           ||||||||||||||||||||
Sbjct: 305 ggcttcgactccgactccga 286
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>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020
          Length = 1824958

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ggcttcgactccgactccga 116
              ||||||||||||||||||||
Sbjct: 403407 ggcttcgactccgactccga 403426
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>gb|AY052369.1| Homo sapiens PP2A B56 gamma gene, complete cds, alternative splice
            products
          Length = 121028

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 144  aggaggagaaggaaccaaggaggg 167
            ||||| ||||||||||||||||||
Sbjct: 4955 aggagcagaaggaaccaaggaggg 4978
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>gb|AC026784.5| Homo sapiens chromosome 5 clone CTD-2138O14, complete sequence
          Length = 132278

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 148   ggagaaggaaccaaggagggaggc 171
             |||||||||||||||||| |||||
Sbjct: 75458 ggagaaggaaccaaggagagaggc 75435
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>dbj|AK086530.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930035B02 product:fibroblast growth
           factor 6, full insert sequence
          Length = 1150

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ggattttacactaagagaac 589
           ||||||||||||||||||||
Sbjct: 639 ggattttacactaagagaac 658
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>gb|AC074052.6| Homo sapiens chromosome 16 clone RP11-483K5, complete sequence
          Length = 188458

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   aaggagggaggcatcagaag 179
             ||||||||||||||||||||
Sbjct: 47887 aaggagggaggcatcagaag 47868
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 457      tttcatgatgtaacactgga 476
                ||||||||||||||||||||
Sbjct: 32126832 tttcatgatgtaacactgga 32126851
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>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0512C01
          Length = 176261

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 457    tttcatgatgtaacactgga 476
              ||||||||||||||||||||
Sbjct: 168646 tttcatgatgtaacactgga 168665
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>emb|BX005442.10| Zebrafish DNA sequence from clone DKEY-88J15, complete sequence
          Length = 200176

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   cggtcagctggatgtaaacc 289
             ||||||||||||||||||||
Sbjct: 79522 cggtcagctggatgtaaacc 79541
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>emb|AL928693.9| Mouse DNA sequence from clone RP23-407K8 on chromosome 2, complete
              sequence
          Length = 206478

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 151    gaaggaaccaaggagggagg 170
              ||||||||||||||||||||
Sbjct: 136275 gaaggaaccaaggagggagg 136294
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>gb|AC018769.2|AC018769 Homo sapiens chromosome 16 clone RP11-568A19, complete sequence
          Length = 157613

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    aaggagggaggcatcagaag 179
              ||||||||||||||||||||
Sbjct: 128155 aaggagggaggcatcagaag 128136
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>dbj|AK066596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070K24, full
           insert sequence
          Length = 1618

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 tttcatgatgtaacactgga 476
           ||||||||||||||||||||
Sbjct: 455 tttcatgatgtaacactgga 474
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>emb|BX950195.14| Zebrafish DNA sequence from clone CH211-232M10 in linkage group 19,
             complete sequence
          Length = 149624

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 461   atgatgtaacactggaaaac 480
             ||||||||||||||||||||
Sbjct: 52133 atgatgtaacactggaaaac 52152
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>dbj|AK061563.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E04, full
           insert sequence
          Length = 1400

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 457 tttcatgatgtaacactgga 476
           ||||||||||||||||||||
Sbjct: 411 tttcatgatgtaacactgga 430
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>gb|AY104313.1| Zea mays PCO093744 mRNA sequence
          Length = 1823

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 tgttttcatgatgtaacact 473
           ||||||||||||||||||||
Sbjct: 483 tgttttcatgatgtaacact 502
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>emb|AL137779.6|CNS01DWM Human chromosome 14 DNA sequence BAC C-2017C7 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 189116

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 144   aggaggagaaggaaccaaggaggg 167
             ||||| ||||||||||||||||||
Sbjct: 66705 aggagcagaaggaaccaaggaggg 66682
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 118     aggtggtggtggaggctttc 137
               ||||||||||||||||||||
Sbjct: 4017680 aggtggtggtggaggctttc 4017699
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>emb|BX005189.9| Mouse DNA sequence from clone RP23-170L24 on chromosome X, complete
              sequence
          Length = 206372

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     ttaaaggcttctctggcttc 102
              ||||||||||||||||||||
Sbjct: 173341 ttaaaggcttctctggcttc 173322
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>gb|AC140940.1| Gallus gallus BAC clone TAM32-30H10 from chromosome ul, complete
             sequence
          Length = 105327

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 118   aggtggtggtggaggctttctctg 141
             |||||||||||||||||| |||||
Sbjct: 88146 aggtggtggtggaggcttactctg 88169
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>gb|AC160019.2| Gallus gallus BAC clone CH261-50H15 from chromosome unknown, complete
              sequence
          Length = 228494

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 579    actaagagaactgaaatcactgag 602
              |||| |||||||||||||||||||
Sbjct: 209091 actatgagaactgaaatcactgag 209114
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>gb|AC157951.2| Gallus gallus BAC clone CH261-173J5 from chromosome unknown, complete
              sequence
          Length = 206432

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 579    actaagagaactgaaatcactgag 602
              |||| |||||||||||||||||||
Sbjct: 128236 actatgagaactgaaatcactgag 128213
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>emb|AL772316.6| Mouse DNA sequence from clone RP23-19G2 on chromosome 4, complete
              sequence
          Length = 167141

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 547    aatatgactgggtggtttgt 566
              ||||||||||||||||||||
Sbjct: 120689 aatatgactgggtggtttgt 120708
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>gb|M92416.1|MUSFGFAB Mus musculus fibroblast growth factor (Fgf6) mRNA, 3' end
          Length = 4607

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 570 ggattttacactaagagaac 589
           ||||||||||||||||||||
Sbjct: 623 ggattttacactaagagaac 642
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>dbj|AB032757.1| Mus musculus gad65 gene for glutamate decarboxylase 65, partial cds
          Length = 4113

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 151  gaaggaaccaaggagggagg 170
            ||||||||||||||||||||
Sbjct: 3310 gaaggaaccaaggagggagg 3291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,100,763
Number of Sequences: 3902068
Number of extensions: 5100763
Number of successful extensions: 96547
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96322
Number of HSP's gapped (non-prelim): 220
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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