ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009251.1| Triticum aestivum clone wlk4.pk0006.e8:fis, full insert mRNA sequence Length = 1553 Score = 1023 bits (516), Expect = 0.0 Identities = 611/639 (95%), Gaps = 3/639 (0%) Strand = Plus / Plus Query: 1 tttaactgnagcatgctgggctctttcctatctctctga-ggcaccaatgnacaagnatc 59 |||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||| ||| Sbjct: 860 tttaactgatgcatgctgggctctttcgtatctctctgatggcaccaatg-acaag-atc 917 Query: 60 caatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatca 119 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 918 caatctgtgattgatgctggtgtctgtccccggcttgtggagcttctcctccatccatca 977 Query: 120 ccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgactca 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 978 ccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgactcg 1037 Query: 180 caaactcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaa 239 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 1038 caaactcagtgcatcattgatcatcaagctcttgggtgtctcctaagtctgttgacacaa 1097 Query: 240 aatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggt 299 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1098 aatcacaagaaaagcatcaagaaagaggcctgctggactgtttcaaatatcactgctggt 1157 Query: 300 aacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctg 359 ||||||||||||||||||||||||||||||||||| |||||| ||| ||||||||||| Sbjct: 1158 aacaaagatcagatacaggctgtgattactgctgggattattggacctctggtgcatctg 1217 Query: 360 ctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacc 419 |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1218 ctgcaaacggctgaattcgatatcaagaaggaggctgcttgggccatctcgaatgctacc 1277 Query: 420 tccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactg 479 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1278 tccggtggttcccacgaccaaatcaagtatttggttagcgagggctgcatcaagccactg 1337 Query: 480 tgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgag 539 ||||||||||| ||||||||||||||||| || ||||| ||||||||||||||||||||| Sbjct: 1338 tgtgacctcctgctttgcccagatccaaggattgttactgtttgcttggagggtcttgag 1397 Query: 540 aacattctcaaagttggagagactgataagaatttgggtgcttctggggagggaaatgtc 599 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 1398 aacattctcaaagttggagaaactgataagaatttgggtgcttctggggaggggaatgtc 1457 Query: 600 tatgcacagatgattgatgaagcagaaggcctggaaaag 638 ||||| |||||||||||||||||||| |||||||||||| Sbjct: 1458 tatgcgcagatgattgatgaagcagagggcctggaaaag 1496
>ref|NM_187874.1| Oryza sativa (japonica cultivar-group), Ozsa8318 predicted mRNA Length = 1581 Score = 545 bits (275), Expect = e-152 Identities = 482/547 (88%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 787 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 844 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcctccatccatcaccttcagtgctta 132 | |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 845 aagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtgctta 904 Query: 133 tacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaactcagtgca 192 |||| |||||||||||||||||||||||||| || ||||||||| | ||||||||||||| Sbjct: 905 tacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcagtgca 964 Query: 193 tcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcacaagaaaa 252 |||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| Sbjct: 965 tcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaagaaaa 1024 Query: 253 gcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcaga 312 |||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1025 gcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagatcaga 1084 Query: 313 tacaggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctg 372 |||||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| | Sbjct: 1085 tacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcag 1144 Query: 373 agtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttccc 432 |||| |||||||||||||| ||||| ||||||||||| |||||||| || || ||| || Sbjct: 1145 agttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagcc 1204 Query: 433 atgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctcc 492 |||| ||||| |||||| |||| ||||||||||||||||||||| ||||||| || || Sbjct: 1205 atgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatcttctta 1264 Query: 493 tttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaacattctcaaag 552 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1265 tttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattcttaaag 1324 Query: 553 ttggaga 559 | ||||| Sbjct: 1325 taggaga 1331
>gb|AF005265.1| Oryza sativa importin mRNA, complete cds Length = 2038 Score = 545 bits (275), Expect = e-152 Identities = 482/547 (88%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 858 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 915 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcctccatccatcaccttcagtgctta 132 | |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 916 aagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtgctta 975 Query: 133 tacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaactcagtgca 192 |||| |||||||||||||||||||||||||| || ||||||||| | ||||||||||||| Sbjct: 976 tacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcagtgca 1035 Query: 193 tcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcacaagaaaa 252 |||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| Sbjct: 1036 tcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaagaaaa 1095 Query: 253 gcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcaga 312 |||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1096 gcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagatcaga 1155 Query: 313 tacaggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctg 372 |||||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| | Sbjct: 1156 tacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcag 1215 Query: 373 agtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttccc 432 |||| |||||||||||||| ||||| ||||||||||| |||||||| || || ||| || Sbjct: 1216 agttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagcc 1275 Query: 433 atgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctcc 492 |||| ||||| |||||| |||| ||||||||||||||||||||| ||||||| || || Sbjct: 1276 atgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatcttctta 1335 Query: 493 tttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaacattctcaaag 552 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1336 tttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattcttaaag 1395 Query: 553 ttggaga 559 | ||||| Sbjct: 1396 taggaga 1402
>dbj|AK068233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A11, full insert sequence Length = 2143 Score = 545 bits (275), Expect = e-152 Identities = 482/547 (88%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 954 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 1011 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcctccatccatcaccttcagtgctta 132 | |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1012 aagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtgctta 1071 Query: 133 tacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaactcagtgca 192 |||| |||||||||||||||||||||||||| || ||||||||| | ||||||||||||| Sbjct: 1072 tacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcagtgca 1131 Query: 193 tcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcacaagaaaa 252 |||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| Sbjct: 1132 tcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaagaaaa 1191 Query: 253 gcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcaga 312 |||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1192 gcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagatcaga 1251 Query: 313 tacaggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctg 372 |||||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| | Sbjct: 1252 tacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcag 1311 Query: 373 agtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttccc 432 |||| |||||||||||||| ||||| ||||||||||| |||||||| || || ||| || Sbjct: 1312 agttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagcc 1371 Query: 433 atgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctcc 492 |||| ||||| |||||| |||| ||||||||||||||||||||| ||||||| || || Sbjct: 1372 atgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatcttctta 1431 Query: 493 tttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaacattctcaaag 552 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1432 tttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattcttaaag 1491 Query: 553 ttggaga 559 | ||||| Sbjct: 1492 taggaga 1498
>dbj|AB004660.1| Oryza sativa mRNA for NLS receptor, complete cds Length = 2090 Score = 545 bits (275), Expect = e-152 Identities = 482/547 (88%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 892 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 949 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcctccatccatcaccttcagtgctta 132 | |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 950 aagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtgctta 1009 Query: 133 tacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaactcagtgca 192 |||| |||||||||||||||||||||||||| || ||||||||| | ||||||||||||| Sbjct: 1010 tacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcagtgca 1069 Query: 193 tcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcacaagaaaa 252 |||||||||||||||| || || ||||| |||||||||||| |||||| |||||||| Sbjct: 1070 tcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaagaaaa 1129 Query: 253 gcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcaga 312 |||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1130 gcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagatcaga 1189 Query: 313 tacaggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctg 372 |||||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| | Sbjct: 1190 tacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcag 1249 Query: 373 agtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttccc 432 |||| |||||||||||||| ||||| ||||||||||| |||||||| || || ||| || Sbjct: 1250 agttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagcc 1309 Query: 433 atgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctcc 492 |||| ||||| |||||| |||| ||||||||||||||||||||| ||||||| || || Sbjct: 1310 atgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatcttctta 1369 Query: 493 tttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaacattctcaaag 552 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1370 tttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattcttaaag 1429 Query: 553 ttggaga 559 | ||||| Sbjct: 1430 taggaga 1436
>dbj|AK099336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020P11, full insert sequence Length = 2104 Score = 537 bits (271), Expect = e-149 Identities = 481/547 (87%), Gaps = 3/547 (0%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 915 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 972 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcctccatccatcaccttcagtgctta 132 | |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 973 aagctggtgtttgcccccgtcttgtggagcttctcctccatccatcaccttcagtgctta 1032 Query: 133 tacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaactcagtgca 192 |||| |||||||||||||||||||||||||| || ||||||||| | ||||||||||||| Sbjct: 1033 tacccgcactacgaactgttggaaatattgtaactggagatgacgcgcaaactcagtgca 1092 Query: 193 tcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcacaagaaaa 252 |||||||| ||||||| || || ||||| |||||||||||| |||||| |||||||| Sbjct: 1093 tcattgattatcaagccctcccttgcctcctaagtctgttgacacaaaatctcaagaaaa 1152 Query: 253 gcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcaga 312 |||| ||||||||||| ||||||||| |||||||||| |||||||||||||||||||||| Sbjct: 1153 gcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaagatcaga 1212 Query: 313 tacaggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctg 372 |||||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| | Sbjct: 1213 tacaggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcag 1272 Query: 373 agtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttccc 432 |||| |||||||||||||| ||||| ||||||||||| |||||||| || || ||| || Sbjct: 1273 agttcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagcc 1332 Query: 433 atgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctcc 492 |||| ||||| |||||| |||| ||||||||||||||||||||| ||||||| || || Sbjct: 1333 atgatcaaatcaagtatctggtgagcgagggctgcatcaagccattgtgtgatcttctta 1392 Query: 493 tttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaacattctcaaag 552 ||||||||||| |||||||||||||||||| ||||||||||| ||||||||||| |||| Sbjct: 1393 tttgcccagatataagaatcgttacagtttgtttggagggtctcgagaacattcttaaag 1452 Query: 553 ttggaga 559 | ||||| Sbjct: 1453 taggaga 1459
>gb|AY108183.1| Zea mays PCO130036 mRNA sequence Length = 1271 Score = 424 bits (214), Expect = e-115 Identities = 421/490 (85%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacctt 123 |||||||||| |||||||| || ||||| || |||||||||||||||||||||||||| | Sbjct: 20 ctgtgattgaagctggtgtttgcccccggctcgtggagcttctcctccatccatcaccat 79 Query: 124 cagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaa 183 | |||||||||||||| |||||||||||||| ||||||||||| |||||||| | |||| Sbjct: 80 cggtgcttatacctgctctacgaactgttgggaatattgtcactggagatgatttgcaaa 139 Query: 184 ctcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatc 243 ||||||| || |||||||||||||||||| | ||| | | ||||||||| | || | Sbjct: 140 ctcagtgtattattgatcatcaagctcttccccgcctcatgaatctgttgacgcagaacc 199 Query: 244 acaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaaca 303 ||||||||||||||||||||||||| ||||||||| |||||||||| |||||||| |||| Sbjct: 200 acaagaaaagcattaagaaagaggcatgctggactatttcaaatattactgctggaaaca 259 Query: 304 aagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctgc 363 ||||||||||||||||||| || | ||| || || || ||||||| |||| ||||| | Sbjct: 260 aagatcagatacaggctgtcataagtgccggtatcatcgctcctttgttgcaactgcttc 319 Query: 364 aaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccg 423 |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 320 aaacagcagagtttgatatcaagaaggaggctgcttgggccatctcaaatgctacctctg 379 Query: 424 gtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtg 483 ||||||| ||||| ||||| ||||| ||||| |||||||||||||||||| |||||| Sbjct: 380 gtggttctcatgagcaaatcaagtacttggtgtctgagggctgcatcaagccattgtgtg 439 Query: 484 acctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaaca 543 |||| || | ||||| ||||| ||||| || |||||||| |||||||||| ||||| | Sbjct: 440 accttcttgtctgccctgatccgagaattgtaacagtttgtctggagggtctggagaata 499 Query: 544 ttctcaaagt 553 |||| ||||| Sbjct: 500 ttcttaaagt 509 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 606 cagatgattgatgaagcagaaggcctggaaaag 638 |||||||| |||||||| ||||||||||||||| Sbjct: 562 cagatgatcgatgaagcggaaggcctggaaaag 594
>gb|AY103576.1| Zea mays PCO130039 mRNA sequence Length = 2710 Score = 385 bits (194), Expect = e-103 Identities = 424/498 (85%), Gaps = 2/498 (0%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 |||||| |||| ||||| |||||||| || ||||| ||||||||||| || ||||||||| Sbjct: 979 atccaagctgtaattgaagctggtgtttgcccccggcttgtggagctccttctccatcca 1038 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgac 176 ||||| || |||||||||||||| |||||||||||||| || ||||| || |||||||| Sbjct: 1039 tcaccgtcggtgcttatacctgctctacgaactgttgggaacattgtaactggagatga- 1097 Query: 177 tca-caaactcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgac 235 ||| ||||||||||| ||||||||||||||||||||| | ||||| | | | ||||| Sbjct: 1098 tcagcaaactcagtgtatcattgatcatcaagctcttccccgcctcctgaatttattgac 1157 Query: 236 agaaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgc 295 | | || |||||||||||||||||||||||||| |||||||| |||||||||| ||||| Sbjct: 1158 acagaaccacaagaaaagcattaagaaagaggcatgctggacgatttcaaatattactgc 1217 Query: 296 tggtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgca 355 ||| ||||||||||||||||||||||| || | |||||| ||||| ||||||| |||| Sbjct: 1218 tggaaacaaagatcagatacaggctgtcataagtgctggtattatcgctcctttgttgca 1277 Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 ||||| ||| || |||||||||||||||||||||||||||||||||||||| || || Sbjct: 1278 actgcttcaaggagcagagtttgatatcaagaaggaggctgcttgggccatctcaaacgc 1337 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagcc 475 |||||| |||||||||||||| ||||| ||||| ||||| |||||||||||| ||| Sbjct: 1338 tacctctggtggttcccatgagcaaatcaagtacttggtgtctgagggctgcatcgtgcc 1397 Query: 476 actgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtct 535 ||||| ||||| || ||||||| ||||| ||||| || |||||||| |||||||||| Sbjct: 1398 gctgtgcgaccttcttgtttgccctgatccgagaattgtaacagtttgtctggagggtct 1457 Query: 536 tgagaacattctcaaagt 553 |||||| ||||| ||||| Sbjct: 1458 tgagaatattcttaaagt 1475 Score = 42.1 bits (21), Expect = 2.2 Identities = 30/33 (90%) Strand = Plus / Plus Query: 606 cagatgattgatgaagcagaaggcctggaaaag 638 ||||||||||| || || ||||||||||||||| Sbjct: 1528 cagatgattgacgacgcggaaggcctggaaaag 1560
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 186 cagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcac 245 ||||||||||||||||||||||| || || ||||| |||||||||||| |||||| | Sbjct: 8384481 cagtgcatcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctc 8384540 Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| Sbjct: 8384541 aagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaa 8384600 Query: 306 gatcagatacagg 318 ||||||||||||| Sbjct: 8384601 gatcagatacagg 8384613 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 446 gtatttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatcc 505 |||| |||| ||||||||||||||||||||| ||||||| || || ||||||||||| Sbjct: 8385348 gtatctggtgagcgagggctgcatcaagccattgtgtgatcttcttatttgcccagatat 8385407 Query: 506 aagaatcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 8385408 aagaatcgttacagtttgtttggagggtctcgagaacattcttaaagtaggaga 8385461 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 110 ccatccatcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacagg 169 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 8383514 ccatccatcaccttcagtgcttatacccgcactacgaactgttggaaatattgtaactgg 8383573 Query: 170 agatgactcacaaactcag 188 ||||||| | ||||||||| Sbjct: 8383574 agatgacgcgcaaactcag 8383592 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 316 aggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctgagt 375 ||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| |||| Sbjct: 8385100 aggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcagagt 8385159 Query: 376 ttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttcccatg 435 | |||||||||||||| ||||| ||||||||||| |||||||| || || ||| ||||| Sbjct: 8385160 tcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagccatg 8385219 Query: 436 accaaataaagtat 449 | ||||| |||||| Sbjct: 8385220 atcaaatcaagtat 8385233 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 8383313 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 8383370 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcct 109 | |||||||| || ||||| ||||||||||||||||| Sbjct: 8383371 aagctggtgtttgcccccgtcttgtggagcttctcct 8383407 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 352 tgcatctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggc 403 |||||||| ||||| |||||||||||| |||| |||||||||| |||||| Sbjct: 13548594 tgcatctgttgcaacatgctgagtttgatgtcaaaaaggaggctgtttgggc 13548645
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 186 cagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcac 245 ||||||||||||||||||||||| || || ||||| |||||||||||| |||||| | Sbjct: 49107 cagtgcatcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctc 49166 Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| Sbjct: 49167 aagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaa 49226 Query: 306 gatcagatacagg 318 ||||||||||||| Sbjct: 49227 gatcagatacagg 49239 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 446 gtatttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatcc 505 |||| |||| ||||||||||||||||||||| ||||||| || || ||||||||||| Sbjct: 49974 gtatctggtgagcgagggctgcatcaagccattgtgtgatcttcttatttgcccagatat 50033 Query: 506 aagaatcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 50034 aagaatcgttacagtttgtttggagggtctcgagaacattcttaaagtaggaga 50087 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 110 ccatccatcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacagg 169 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 48140 ccatccatcaccttcagtgcttatacccgcactacgaactgttggaaatattgtaactgg 48199 Query: 170 agatgactcacaaactcag 188 ||||||| | ||||||||| Sbjct: 48200 agatgacgcgcaaactcag 48218 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 316 aggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctgagt 375 ||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| |||| Sbjct: 49726 aggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcagagt 49785 Query: 376 ttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttcccatg 435 | |||||||||||||| ||||| ||||||||||| |||||||| || || ||| ||||| Sbjct: 49786 tcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagccatg 49845 Query: 436 accaaataaagtat 449 | ||||| |||||| Sbjct: 49846 atcaaatcaagtat 49859 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 47939 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 47996 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcct 109 | |||||||| || ||||| ||||||||||||||||| Sbjct: 47997 aagctggtgtttgcccccgtcttgtggagcttctcct 48033
>dbj|AB004814.1| Oryza sativa (japonica cultivar-group) DNA for NLS receptor, complete cds Length = 6530 Score = 161 bits (81), Expect = 3e-36 Identities = 120/133 (90%) Strand = Plus / Plus Query: 186 cagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatcac 245 ||||||||||||||||||||||| || || ||||| |||||||||||| |||||| | Sbjct: 4780 cagtgcatcattgatcatcaagccctcccttgcctcctaagtctgttgacacaaaatctc 4839 Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||||||||| ||||||||| |||||||||| ||||||||||||||| Sbjct: 4840 aagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggtaacaaa 4899 Query: 306 gatcagatacagg 318 ||||||||||||| Sbjct: 4900 gatcagatacagg 4912 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 446 gtatttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatcc 505 |||| |||| ||||||||||||||||||||| ||||||| || || ||||||||||| Sbjct: 5647 gtatctggtgagcgagggctgcatcaagccattgtgtgatcttcttatttgcccagatat 5706 Query: 506 aagaatcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 5707 aagaatcgttacagtttgtttggagggtctcgagaacattcttaaagtaggaga 5760 Score = 117 bits (59), Expect = 5e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 110 ccatccatcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacagg 169 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| || || Sbjct: 3813 ccatccatcaccttcagtgcttatacccgcactacgaactgttggaaatattgtaactgg 3872 Query: 170 agatgactcacaaactcag 188 ||||||| | ||||||||| Sbjct: 3873 agatgacgcgcaaactcag 3891 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 316 aggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctgagt 375 ||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| |||| Sbjct: 5399 aggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcagagt 5458 Query: 376 ttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttcccatg 435 | |||||||||||||| ||||| ||||||||||| |||||||| || || ||| ||||| Sbjct: 5459 tcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagccatg 5518 Query: 436 accaaataaagtat 449 | ||||| |||||| Sbjct: 5519 atcaaatcaagtat 5532 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/97 (86%), Gaps = 3/97 (3%) Strand = Plus / Plus Query: 14 tgctgggctctttcctatctctctga-ggcaccaatgnacaagnatccaatctgtgattg 72 |||||||||||||| ||| | ||||| ||||| |||| ||||| |||||| | ||||||| Sbjct: 3612 tgctgggctctttcatatttatctgatggcactaatg-acaag-atccaagccgtgattg 3669 Query: 73 atgctggtgtctgtccccgacttgtggagcttctcct 109 | |||||||| || ||||| ||||||||||||||||| Sbjct: 3670 aagctggtgtttgcccccgtcttgtggagcttctcct 3706
>ref|NM_185275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1605 Score = 155 bits (78), Expect = 2e-34 Identities = 291/362 (80%) Strand = Plus / Plus Query: 183 actcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaat 242 |||||||| |||| ||||||||||||||| |||||| | | || ||||| | ||| Sbjct: 973 actcagtgtgtcatcgatcatcaagctcttccatgtctcttgaacctcttgaccaacaat 1032 Query: 243 cacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaac 302 || ||||||||||| |||||||| || ||||||||| | ||||| ||||||||||| || Sbjct: 1033 cataagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctggcaat 1092 Query: 303 aaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctg 362 | || ||||| ||||||||||| | ||| || ||| |||| | || ||||||||| Sbjct: 1093 agggaacagattcaggctgtgatcaatgcaaacataattgctcctctagtacatctgctg 1152 Query: 363 caaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctcc 422 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || Sbjct: 1153 caaactgctgaatttgacatcaagaaagaggctgcgtgggcaatctcaaatgccacttct 1212 Query: 423 ggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgt 482 ||||| | ||||| || || ||||| | ||| | |||| |||||||||||||| ||| Sbjct: 1213 ggtggaacacatgatcagattaagtaccttgttgcccagggttgcatcaagccactctgt 1272 Query: 483 gacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaac 542 || || || ||||||||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 1273 gatctgcttgtttgcccagatcccaggatcgtgacagtttgcttggaaggtcttgagaac 1332 Query: 543 at 544 || Sbjct: 1333 at 1334
>dbj|AK100133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010D07, full insert sequence Length = 2275 Score = 155 bits (78), Expect = 2e-34 Identities = 291/362 (80%) Strand = Plus / Plus Query: 183 actcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaat 242 |||||||| |||| ||||||||||||||| |||||| | | || ||||| | ||| Sbjct: 1105 actcagtgtgtcatcgatcatcaagctcttccatgtctcttgaacctcttgaccaacaat 1164 Query: 243 cacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaac 302 || ||||||||||| |||||||| || ||||||||| | ||||| ||||||||||| || Sbjct: 1165 cataagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctggcaat 1224 Query: 303 aaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctg 362 | || ||||| ||||||||||| | ||| || ||| |||| | || ||||||||| Sbjct: 1225 agggaacagattcaggctgtgatcaatgcaaacataattgctcctctagtacatctgctg 1284 Query: 363 caaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctcc 422 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || Sbjct: 1285 caaactgctgaatttgacatcaagaaagaggctgcgtgggcaatctcaaatgccacttct 1344 Query: 423 ggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgt 482 ||||| | ||||| || || ||||| | ||| | |||| |||||||||||||| ||| Sbjct: 1345 ggtggaacacatgatcagattaagtaccttgttgcccagggttgcatcaagccactctgt 1404 Query: 483 gacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaac 542 || || || ||||||||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 1405 gatctgcttgtttgcccagatcccaggatcgtgacagtttgcttggaaggtcttgagaac 1464 Query: 543 at 544 || Sbjct: 1465 at 1466
>dbj|AB024311.1| Oryza sativa (japonica cultivar-group) mRNA for importin alpha 1b, complete cds Length = 2632 Score = 155 bits (78), Expect = 2e-34 Identities = 291/362 (80%) Strand = Plus / Plus Query: 183 actcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaat 242 |||||||| |||| ||||||||||||||| |||||| | | || ||||| | ||| Sbjct: 1117 actcagtgtgtcatcgatcatcaagctcttccatgtctcttgaacctcttgaccaacaat 1176 Query: 243 cacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaac 302 || ||||||||||| |||||||| || ||||||||| | ||||| ||||||||||| || Sbjct: 1177 cataagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctggcaat 1236 Query: 303 aaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctg 362 | || ||||| ||||||||||| | ||| || ||| |||| | || ||||||||| Sbjct: 1237 agggaacagattcaggctgtgatcaatgcaaacataattgctcctctagtacatctgctg 1296 Query: 363 caaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctcc 422 ||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||||| || || Sbjct: 1297 caaactgctgaatttgacatcaagaaagaggctgcgtgggcaatctcaaatgccacttct 1356 Query: 423 ggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgt 482 ||||| | ||||| || || ||||| | ||| | |||| |||||||||||||| ||| Sbjct: 1357 ggtggaacacatgatcagattaagtaccttgttgcccagggttgcatcaagccactctgt 1416 Query: 483 gacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaac 542 || || || ||||||||||||| || ||||| |||||||||||||| |||||||||||| Sbjct: 1417 gatctgcttgtttgcccagatcccaggatcgtgacagtttgcttggaaggtcttgagaac 1476 Query: 543 at 544 || Sbjct: 1477 at 1478
>gb|AY103821.1| Zea mays PCO084551 mRNA sequence Length = 2318 Score = 139 bits (70), Expect = 1e-29 Identities = 253/314 (80%) Strand = Plus / Plus Query: 243 cacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaac 302 |||||||||||||| |||||||| || |||||||| | ||||| ||||| ||||||||| Sbjct: 1132 cacaagaaaagcatcaagaaagaagcatgctggacaatctcaaacatcacagctggtaac 1191 Query: 303 aaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctg 362 || || ||||| ||||||||||| | ||| || ||| ||| ||||||| || ||| Sbjct: 1192 aaggagcagattcaggctgtgatcaatgcaaatataattgcacctctggtgcaactcctg 1251 Query: 363 caaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctcc 422 ||||| ||||| ||||| |||||||| || || || ||||| || || ||||| || || Sbjct: 1252 caaactgctgaatttgacatcaagaaagaagcagcctgggcaatttcaaatgccacttct 1311 Query: 423 ggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgt 482 ||||| | ||||| || || ||||| | ||| | |||| ||||| |||||||| ||| Sbjct: 1312 ggtggcacacatgatcagatcaagtaccttgttgcccagggttgcattaagccactctgt 1371 Query: 483 gacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaac 542 || || || ||||||| ||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 1372 gatctgcttgtttgcccggatcccagaatcgtaacagtttgcttggagggtcttgagaac 1431 Query: 543 attctcaaagttgg 556 || || |||||||| Sbjct: 1432 atcctgaaagttgg 1445
>gb|AF369707.1| Capsicum annuum importin alpha 2 mRNA, complete cds Length = 2096 Score = 127 bits (64), Expect = 5e-26 Identities = 289/364 (79%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacctt 123 |||| ||||| || ||||||||||| || || || ||||| ||| | ||||| || |||| Sbjct: 862 ctgtcattgaagcgggtgtctgtccacggctggttgagctcctcgtgcatccgtctcctt 921 Query: 124 cagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaa 183 |||| || || ||||| || || || || ||||||||||| |||||||||||| || | Sbjct: 922 cagtactcatccctgccctccgtacagtaggaaatattgttacaggagatgacctccaga 981 Query: 184 ctcagtgcatcattgatcatcaagctcttgggtgtctcctcagtctgttgacagaaaatc 243 |||||||||| ||||| ||| || ||| || || || || |||| ||| | |||| Sbjct: 982 ctcagtgcattattgaacatggtgcccttccttgcctgctgagcttgttaacacacaatc 1041 Query: 244 acaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaaca 303 ||||||| ||||| ||||||||||||||||||||| | |||||||| |||||||| |||| Sbjct: 1042 acaagaagagcatcaagaaagaggcctgctggactatatcaaatattactgctgggaaca 1101 Query: 304 aagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctgc 363 | || |||||||||||||| ||| | |||||| | ||| |||| |||| || |||| | Sbjct: 1102 aggaacagatacaggctgtaattgcggctggattaattagtcctctggtcaatttgcttc 1161 Query: 364 aaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccg 423 | | || || |||||||| || || |||||||| ||||| || || |||||||| |||| Sbjct: 1162 agagtgcagaatttgatataaaaaaagaggctgcctgggctatttcaaatgctacttccg 1221 Query: 424 gtgg 427 |||| Sbjct: 1222 gtgg 1225
>dbj|AP000492.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0705D01 Length = 147174 Score = 123 bits (62), Expect = 8e-25 Identities = 101/114 (88%) Strand = Plus / Plus Query: 446 gtatttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatcc 505 |||| |||| ||||||||||||||||||||| ||||||| || || ||||||||||| Sbjct: 303 gtatctggtgagcgagggctgcatcaagccattgtgtgatcttcttatttgcccagatat 362 Query: 506 aagaatcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 |||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||| Sbjct: 363 aagaatcgttacagtttgtttggagggtctcgagaacattcttaaagtaggaga 416 Score = 99.6 bits (50), Expect = 1e-17 Identities = 113/134 (84%) Strand = Plus / Plus Query: 316 aggctgtgattactgctggaattatttttcctttggtgcatctgctgcaaacggctgagt 375 ||||||| || | |||||| |||||| |||| ||||| ||||||| |||||||| |||| Sbjct: 55 aggctgtcataaatgctggcattattggtcctctggtgaatctgctccaaacggcagagt 114 Query: 376 ttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttcccatg 435 | |||||||||||||| ||||| ||||||||||| |||||||| || || ||| ||||| Sbjct: 115 tcgatatcaagaaggaagctgcatgggccatctcaaatgctacttcaggcggtagccatg 174 Query: 436 accaaataaagtat 449 | ||||| |||||| Sbjct: 175 atcaaatcaagtat 188
>gb|BT013664.1| Lycopersicon esculentum clone 132483R, mRNA sequence Length = 2159 Score = 115 bits (58), Expect = 2e-22 Identities = 154/186 (82%) Strand = Plus / Plus Query: 242 tcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaa 301 |||||| || ||||| |||||||||||||| |||||| | |||||||| |||||||| || Sbjct: 1094 tcacaaaaagagcatcaagaaagaggcctgttggactatatcaaatattactgctgggaa 1153 Query: 302 caaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgct 361 ||| || |||||||||||||||||| |||||| | ||| |||| |||| || |||| Sbjct: 1154 caaggaacagatacaggctgtgattgaggctggattaattagtcctctggtcaatttgct 1213 Query: 362 gcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctc 421 ||||| || |||||||| ||||| || |||||||| ||||| || || |||||||| || Sbjct: 1214 tcaaactgcagagtttgacatcaaaaaagaggctgcctgggctatttcaaatgctacttc 1273 Query: 422 cggtgg 427 |||||| Sbjct: 1274 cggtgg 1279 Score = 63.9 bits (32), Expect = 6e-07 Identities = 110/136 (80%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacctt 123 |||| ||||| || ||||| ||||| || || || ||||| ||| | |||||||| |||| Sbjct: 916 ctgtcattgaagcaggtgtttgtccacgtctggtcgagctcctcatgcatccatctcctt 975 Query: 124 cagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatgactcacaaa 183 |||| || || ||||| || || || || ||||||||||| |||||||||||| || | Sbjct: 976 cagtactcatccctgccctccgtacagtaggaaatattgttacaggagatgacctccaga 1035 Query: 184 ctcagtgcatcattga 199 |||||||||| ||||| Sbjct: 1036 ctcagtgcattattga 1051
>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.3 mRNA, complete cds Length = 2475 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1119 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1178 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1179 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1238 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1239 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1298 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1299 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1358 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1359 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1418 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1419 aaaacattctcaaggttggtgaggctga 1446 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 945 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 985
>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.2 mRNA, complete cds Length = 2404 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1129 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1188 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1189 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1248 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1249 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1308 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1309 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1368 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1369 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1428 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1429 aaaacattctcaaggttggtgaggctga 1456 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 955 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 995
>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.1 mRNA, complete cds Length = 2710 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1129 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1188 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1189 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1248 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1249 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1308 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1309 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1368 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1369 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1428 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1429 aaaacattctcaaggttggtgaggctga 1456 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 955 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 995
>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence Length = 2406 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1415 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1474 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1475 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1534 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1535 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1594 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1595 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1654 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1655 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1714 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1715 aaaacattctcaaggttggtgaggctga 1742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 994 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 1034
>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 1648 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1031 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1090 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1091 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1150 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1151 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1210 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1211 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1270 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1271 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1330 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1331 aaaacattctcaaggttggtgaggctga 1358 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 857 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 897
>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 2001 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1129 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1188 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1189 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1248 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1249 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1308 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1309 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1368 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1369 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1428 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1429 aaaacattctcaaggttggtgaggctga 1456 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 955 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 995
>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 103 bits (52), Expect = 7e-19 Identities = 259/328 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 1089 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 1148 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| Sbjct: 1149 ggaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcact 1208 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 |||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| | Sbjct: 1209 tgctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgcca 1268 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 | || || || || ||||| || || | |||||||| | | | ||||||||||| |||| Sbjct: 1269 catcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccac 1328 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| || || | ||||| |||||||| ||||| ||||| ||| | |||||||||| Sbjct: 1329 tttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttg 1388 Query: 538 agaacattctcaaagttggagagactga 565 | ||||||||||| ||||| ||| |||| Sbjct: 1389 aaaacattctcaaggttggtgaggctga 1416 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 915 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 955
>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4 Length = 1778 Score = 101 bits (51), Expect = 3e-18 Identities = 258/327 (78%) Strand = Plus / Plus Query: 239 aaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctgg 298 ||||||||||||||| || || ||||| || || |||||| | || ||||| |||||||| Sbjct: 1002 aaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctgg 1061 Query: 299 taacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatct 358 || ||| ||||||| |||||||| || |||||||| || | ||| | ||||| | Sbjct: 1062 gaataaacttcagatagaggctgtggttggcgctggaataatcctccctcttgtgcactt 1121 Query: 359 gctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctac 418 ||| |||| || ||||| ||||| |||||||| ||||||||||| || || ||||| || Sbjct: 1122 gctccaaaacgcggagttcgatataaagaaggaagctgcttgggctatttccaatgccac 1181 Query: 419 ctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccact 478 || || || || ||||| || || | |||||||| | | | ||||||||||| ||||| Sbjct: 1182 atcaggagggtcacatgagcagattcaatatttggtgacccaaggctgcatcaaaccact 1241 Query: 479 gtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttga 538 ||||| || || | ||||| |||||||| ||||| ||||| ||| | ||||||||||| Sbjct: 1242 ttgtgatcttctaatctgccctgatccaaggatcgtgacagtgtgcctcgagggtcttga 1301 Query: 539 gaacattctcaaagttggagagactga 565 ||||||||||| ||||| ||| |||| Sbjct: 1302 aaacattctcaaggttggtgaggctga 1328 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 830 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 870
>gb|DQ252507.1| Solanum tuberosum clone 085H03 importin alpha 1-like mRNA, complete cds Length = 1618 Score = 95.6 bits (48), Expect = 2e-16 Identities = 240/304 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 ||||||||||||||||||| ||||| || || || ||||| | || ||||||||||||| Sbjct: 1036 aaaatcacaagaaaagcatcaagaaggaagcatgttggacaatctctaatatcactgctg 1095 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | |||| || || ||||||||||| ||| || |||||| |||| |||| || | Sbjct: 1096 gaaacagagcccaaatacaggctgttattgaggcgaatattattcttcccatggtacacc 1155 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 | |||||| || || ||||| || ||||||||||| || ||||| ||||| ||||||| Sbjct: 1156 tattgcaaaatgcagaatttgacattaagaaggaggcagcatgggctatctctaatgcta 1215 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 |||| || || || ||||||| || | || |||| ||| | || ||||| ||||||| Sbjct: 1216 cctctggaggatctaatgaccagattaggttcttggctagtcaaggttgcattaagccac 1275 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttg 537 | ||||| ||||| |||| |||||||| |||||||||||||| ||||||||||| || | Sbjct: 1276 tatgtgatctcctaatttgtccagatcccagaatcgttacagtatgcttggaggggctcg 1335 Query: 538 agaa 541 |||| Sbjct: 1336 agaa 1339 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacctt 123 |||| |||||||| ||||||||||| ||||| ||||||||||| || || ||||| |||| Sbjct: 862 ctgtaattgatgcaggtgtctgtccacgactagtggagcttcttcttcaaccatcgcctt 921 Query: 124 cagtgcttatacctgcactacgaactgttggaaatattgt 163 | || || |||||||| || ||||||| ||||||||||| Sbjct: 922 ctgttctcatacctgctctccgaactgcgggaaatattgt 961
>gb|BT009445.1| Triticum aestivum clone wlmk8.pk0008.e8:fis, full insert mRNA sequence Length = 2162 Score = 91.7 bits (46), Expect = 3e-15 Identities = 238/302 (78%) Strand = Plus / Plus Query: 243 cacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaac 302 |||||||||||||| |||||||| || |||||||| | ||||| ||||| ||||||||| Sbjct: 1104 cacaagaaaagcatcaagaaagaagcatgctggacaatctcaaacatcacagctggtaac 1163 Query: 303 aaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatctgctg 362 || ||||| |||||||| || || |||||| |||| |||| ||||| ||| Sbjct: 1164 cgggaccagattcaggctgtcatccaggcaaatattattggtcctctggtccatctcctg 1223 Query: 363 caaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctcc 422 ||| ||||| ||||| || ||||||||||| || ||||| || || ||||| || || Sbjct: 1224 caaggtgctgaatttgacattaagaaggaggcggcctgggcaatttcaaatgccacttct 1283 Query: 423 ggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgt 482 ||||| | |||||||| || ||||| | ||| | |||| ||||||||||| || ||| Sbjct: 1284 ggtggaacacatgaccagattaagtaccttgttgcccagggttgcatcaagccgctctgt 1343 Query: 483 gacctcctcctttgcccagatccaagaatcgttacagtttgcttggagggtcttgagaac 542 || || ||| ||||||| ||||| ||||| || |||||||||||||| |||||||| ||| Sbjct: 1344 gatctgctcatttgcccggatcccagaattgtaacagtttgcttggaaggtcttgaaaac 1403 Query: 543 at 544 || Sbjct: 1404 at 1405 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctc 107 ||||||||||||||||| ||||||| | ||| || ||||||||||||||| Sbjct: 918 atccaatctgtgattgagtctggtgtttttcctcgccttgtggagcttctc 968 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 599 ctatgcacagatgattgatgaagcagaaggcctggaaaag 638 ||||||||||||||||||||| || || || ||||||||| Sbjct: 1457 ctatgcacagatgattgatgatgctgagggactggaaaag 1496
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 460 agggctgcatcaagccactgtgtgacctcctcctttgcccagatccaagaatcgttacag 519 |||| |||||||||||||| ||||| || || ||||||||||||| || ||||| |||| Sbjct: 69711 agggttgcatcaagccactctgtgatctgcttgtttgcccagatcccaggatcgtgacag 69652 Query: 520 tttgcttggagggtcttgagaacat 544 |||||||||| |||||||||||||| Sbjct: 69651 tttgcttggaaggtcttgagaacat 69627 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 354 catctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaat 413 |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| Sbjct: 69915 catctgctgcaaactgctgaatttgacatcaagaaagaggctgcgtgggcaatctcaaat 69856 Query: 414 gc 415 || Sbjct: 69855 gc 69854 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 240 aatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctgg 298 ||||| ||||||||||| |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 70106 aatcataagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctgg 70048
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 89.7 bits (45), Expect = 1e-14 Identities = 75/85 (88%) Strand = Plus / Minus Query: 460 agggctgcatcaagccactgtgtgacctcctcctttgcccagatccaagaatcgttacag 519 |||| |||||||||||||| ||||| || || ||||||||||||| || ||||| |||| Sbjct: 3191994 agggttgcatcaagccactctgtgatctgcttgtttgcccagatcccaggatcgtgacag 3191935 Query: 520 tttgcttggagggtcttgagaacat 544 |||||||||| |||||||||||||| Sbjct: 3191934 tttgcttggaaggtcttgagaacat 3191910 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 354 catctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaat 413 |||||||||||||| ||||| ||||| |||||||| |||||||| ||||| ||||| ||| Sbjct: 3192198 catctgctgcaaactgctgaatttgacatcaagaaagaggctgcgtgggcaatctcaaat 3192139 Query: 414 gc 415 || Sbjct: 3192138 gc 3192137 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 240 aatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctgg 298 ||||| ||||||||||| |||||||| || ||||||||| | ||||| ||||||||||| Sbjct: 3192389 aatcataagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctgg 3192331
>gb|AF369706.1| Capsicum annuum importin alpha 1 mRNA, complete cds Length = 1860 Score = 87.7 bits (44), Expect = 4e-14 Identities = 230/292 (78%) Strand = Plus / Plus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 ||||||||||||||||||| |||||||| || |||||||| | || ||||||||||||| Sbjct: 1068 aaaatcacaagaaaagcatcaagaaagaagcatgctggacaatatctaatatcactgctg 1127 Query: 298 gtaacaaagatcagatacaggctgtgattactgctggaattatttttcctttggtgcatc 357 | |||| || || ||||||||||| ||| || |||||| |||| |||| || | Sbjct: 1128 gaaacagagcccaaatacaggctgtcattgaggcaaatattattcttccactggtacacc 1187 Query: 358 tgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgcta 417 | |||||| || || ||||| || ||||||||||| || ||||||||||| ||||||| Sbjct: 1188 tattgcaaaatgcagaatttgacattaagaaggaggcagcatgggccatctcaaatgcta 1247 Query: 418 cctccggtggttcccatgaccaaataaagtatttggttagcgagggctgcatcaagccac 477 |||| || || || |||| || ||| || |||| || | || ||||| ||||||| Sbjct: 1248 cctctggaggatctaatgaacagatacggttcttggcaagtcaaggttgcattaagccac 1307 Query: 478 tgtgtgacctcctcctttgcccagatccaagaatcgttacagtttgcttgga 529 | ||||| ||||| |||| |||||||| ||||||||||| || |||||||| Sbjct: 1308 tatgtgatctcctaatttgtccagatcccagaatcgttacggtatgcttgga 1359 Score = 69.9 bits (35), Expect = 1e-08 Identities = 53/59 (89%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacct 122 |||| |||||||| ||||||||||| ||||| ||||||||||| || |||||||||||| Sbjct: 894 ctgtaattgatgcaggtgtctgtccacgactagtggagcttcttcttcatccatcacct 952
>dbj|AB236757.1| Trifolium pratense RNA for putative importin alpha, complete cds, clone: C1528 Length = 1848 Score = 87.7 bits (44), Expect = 4e-14 Identities = 95/112 (84%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatccatcacctt 123 |||| ||||| |||||||| ||||| ||||| || |||||||| || || ||||| |||| Sbjct: 939 ctgtaattgaagctggtgtttgtcctcgactggttgagcttctactgcacccatctcctt 998 Query: 124 cagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||||| || ||||| || || ||||||||||| |||||||| |||||||| Sbjct: 999 cagtgctaattcctgctcttcgtactgttggaaacattgtcactggagatga 1050 Score = 73.8 bits (37), Expect = 6e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 344 tcctttggtgcatctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggc 403 |||||||||| | ||||| |||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 1219 tcctttggtgaacctgcttcaaaatgctgaatttgatattaagaaagaggctgcttgggc 1278 Query: 404 catctcgaatgctacctccggtggttcccatgaccaaataaagta 448 ||||| |||||||| || ||||| || || || ||||| ||||| Sbjct: 1279 tatctcaaatgctacatctggtggatctcacgaacaaatcaagta 1323
>gb|AC157376.2| Medicago truncatula chromosome 7 BAC clone mth2-70d8, complete sequence Length = 87346 Score = 81.8 bits (41), Expect = 3e-12 Identities = 71/81 (87%) Strand = Plus / Minus Query: 369 gctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggt 428 ||||||||||||||||||||||| ||||| ||||||||||| |||||||| || ||||| Sbjct: 16462 gctgagtttgatatcaagaaggaagctgcctgggccatctcaaatgctacatcgggtgga 16403 Query: 429 tcccatgaccaaataaagtat 449 || ||||| ||| | |||||| Sbjct: 16402 tctcatgaacaactcaagtat 16382 Score = 71.9 bits (36), Expect = 2e-09 Identities = 57/64 (89%) Strand = Plus / Minus Query: 114 ccatcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagat 173 ||||| ||||| |||||||| ||||| ||||| || ||||||||||||||||| |||||| Sbjct: 17296 ccatctccttctgtgcttattcctgctctacgcacagttggaaatattgtcactggagat 17237 Query: 174 gact 177 |||| Sbjct: 17236 gact 17233
>ref|XM_618107.2| PREDICTED: Bos taurus similar to Importin alpha-6 subunit (Karyopherin alpha-5 subunit) (LOC537919), mRNA Length = 1251 Score = 75.8 bits (38), Expect = 2e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| |||||||||||||||||||| ||||||||||| |||| || |||||| |||||| Sbjct: 700 aaagaagcctgctggactgtttcaaacatcactgctggaaacagagctcagattcaggct 759 Query: 321 gt 322 || Sbjct: 760 gt 761
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 75.8 bits (38), Expect = 2e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| |||||||||||||||||||| |||||||||||||| || || ||||| Sbjct: 69302 tctgcttcaaaatgctgagtttgatatcaagaaagaggctgcttgggctatttctaatgc 69361 Query: 416 tacctccggtggttcccatgaccaaataaagtat 449 ||| || ||||| || || || ||||| |||||| Sbjct: 69362 tacatctggtggatctcacgaacaaatcaagtat 69395 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Plus Query: 114 ccatcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagat 173 ||||| ||||||||||| || ||||| || || ||||||||||| |||||||| |||||| Sbjct: 68012 ccatctccttcagtgctaattcctgctcttcgtactgttggaaacattgtcactggagat 68071 Query: 174 gactcacaaactcag 188 || | ||||||||| Sbjct: 68072 gatttgcaaactcag 68086 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagcttct 106 |||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 67850 ctgtaattgaagctggtgtttgtccccgacttgttgagcttct 67892
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 71.9 bits (36), Expect = 2e-09 Identities = 87/104 (83%) Strand = Plus / Minus Query: 462 ggctgcatcaagccactgtgtgacctcctcctttgcccagatccaagaatcgttacagtt 521 ||||||||||| ||||| ||||| || || | ||||| |||||||| ||||| ||||| Sbjct: 4778 ggctgcatcaaaccactttgtgatcttctaatctgccctgatccaaggatcgtgacagtg 4719 Query: 522 tgcttggagggtcttgagaacattctcaaagttggagagactga 565 ||| | ||||||||||| ||||||||||| ||||| ||| |||| Sbjct: 4718 tgcctcgagggtcttgaaaacattctcaaggttggtgaggctga 4675 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 5904 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 5864 Score = 42.1 bits (21), Expect = 2.2 Identities = 51/61 (83%) Strand = Plus / Minus Query: 238 aaaatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctg 297 |||||||||||||||| || || ||||| || || |||||| | || ||||| ||||||| Sbjct: 5399 aaaatcacaagaaaagtataaaaaaagaagcttgttggactatctcgaatattactgctg 5340 Query: 298 g 298 | Sbjct: 5339 g 5339 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 gagtttgatatcaagaaggaggctgcttgggc 403 ||||| ||||| |||||||| ||||||||||| Sbjct: 4993 gagttcgatataaagaaggaagctgcttgggc 4962
>ref|XM_541211.2| PREDICTED: Canis familiaris similar to karyopherin alpha 5 (importin alpha 6) (LOC484094), mRNA Length = 1667 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| ||||||||||||||||| |||||||||||||| || | || |||||| |||||| Sbjct: 1060 aaagaagcctgctggactgtttctaatatcactgctggaaatagagctcagattcaggct 1119 Query: 321 gt 322 || Sbjct: 1120 gt 1121
>gb|AF421152.1|AF421152 Sus scrofa karyopherin alpha 5 mRNA, partial cds Length = 601 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| |||||||||||||||||||| ||||||||||| || | || |||||| |||||| Sbjct: 500 aaagaagcctgctggactgtttcaaacatcactgctggaaatagagctcagattcaggct 559 Query: 321 gt 322 || Sbjct: 560 gt 561
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 242 tcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaa 301 |||||||||||| ||||||||||| | ||||||||||| ||||| || || ||||| || Sbjct: 24959 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctggaaa 24900 Query: 302 caaagatcagatacagg 318 || ||| |||||||||| Sbjct: 24899 cagagagcagatacagg 24883 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Minus Query: 450 ttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatccaaga 509 ||||||||| |||| ||||| ||||| |||||||| | | ||||||| ||||||||| Sbjct: 24572 ttggttagccagggttgcattaagcctctgtgtgatttgatggtttgccctgatccaaga 24513 Query: 510 atcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 || ||||| || || | || ||||||||||| ||||| || |||||||| Sbjct: 24512 attgttactgtctgtctagaaggtcttgagaatattctgaaggttggaga 24463
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 242 tcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaa 301 |||||||||||| ||||||||||| | ||||||||||| ||||| || || ||||| || Sbjct: 118985 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctggaaa 119044 Query: 302 caaagatcagatacagg 318 || ||| |||||||||| Sbjct: 119045 cagagagcagatacagg 119061 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 450 ttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatccaaga 509 ||||||||| |||| ||||| ||||| |||||||| | | ||||||| ||||||||| Sbjct: 119372 ttggttagccagggttgcattaagcctctgtgtgatttgatggtttgccctgatccaaga 119431 Query: 510 atcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 || ||||| || || | || ||||||||||| ||||| || |||||||| Sbjct: 119432 attgttactgtctgtctagaaggtcttgagaatattctgaaggttggaga 119481
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 242 tcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaa 301 |||||||||||| ||||||||||| | ||||||||||| ||||| || || ||||| || Sbjct: 17463 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctggaaa 17522 Query: 302 caaagatcagatacagg 318 || ||| |||||||||| Sbjct: 17523 cagagagcagatacagg 17539 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 450 ttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatccaaga 509 ||||||||| |||| ||||| ||||| |||||||| | | ||||||| ||||||||| Sbjct: 17850 ttggttagccagggttgcattaagcctctgtgtgatttgatggtttgccctgatccaaga 17909 Query: 510 atcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 || ||||| || || | || ||||||||||| ||||| || |||||||| Sbjct: 17910 attgttactgtctgtctagaaggtcttgagaatattctgaaggttggaga 17959
>ref|XM_518711.1| PREDICTED: Pan troglodytes similar to karyopherin alpha 5 (importin alpha 6); importin alpha 6 (LOC462963), mRNA Length = 1846 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| ||||||||||||||||| || ||||||||||| || | || |||||| |||||| Sbjct: 1295 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1354 Query: 321 gt 322 || Sbjct: 1355 gt 1356
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 60.0 bits (30), Expect = 9e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 43458 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 43399 Query: 416 tacctccggtggttcccatgaccaaataaagtat 449 || || |||||||| ||||| |||||||||||| Sbjct: 43398 aacttcaggtggttctcatgatcaaataaagtat 43365 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 43669 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 43610 Query: 306 gatcagatacagg 318 |||||||| |||| Sbjct: 43609 gatcagatccagg 43597 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 493 tttgcccagatccaagaatc 512 |||||||||||||||||||| Sbjct: 43217 tttgcccagatccaagaatc 43198
>gb|BC047409.1| Homo sapiens karyopherin alpha 5 (importin alpha 6), mRNA (cDNA clone MGC:51011 IMAGE:5297277), complete cds Length = 2164 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| ||||||||||||||||| || ||||||||||| || | || |||||| |||||| Sbjct: 1192 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1251 Query: 321 gt 322 || Sbjct: 1252 gt 1253
>ref|NM_002269.2| Homo sapiens karyopherin alpha 5 (importin alpha 6) (KPNA5), mRNA Length = 2172 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| ||||||||||||||||| || ||||||||||| || | || |||||| |||||| Sbjct: 1200 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1259 Query: 321 gt 322 || Sbjct: 1260 gt 1261
>gb|AF005361.1|HUMIMPA6 Homo sapiens importin alpha 6 mRNA, complete cds Length = 1694 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggct 320 ||||| ||||||||||||||||| || ||||||||||| || | || |||||| |||||| Sbjct: 1065 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1124 Query: 321 gt 322 || Sbjct: 1125 gt 1126
>gb|BT014529.1| Lycopersicon esculentum clone 133943R, mRNA sequence Length = 1946 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| ||||| ||||| || ||||| |||||||||||||| || || |||| Sbjct: 1202 atctgctacaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatg 1261 Query: 415 ctacctccggtgg 427 |||| |||||||| Sbjct: 1262 ctacgtccggtgg 1274 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 gcatgctgggctctttcctatctctctga 39 ||||||||||||||||| ||||| ||||| Sbjct: 859 gcatgctgggctctttcatatctttctga 887
>gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mRNA, partial cds Length = 1126 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 64 ctgtgattgatgctggtgtctgtccccgacttgtggagctt 104 |||||||||| || ||||||||||| ||||||||||||||| Sbjct: 945 ctgtgattgaggcaggtgtctgtccacgacttgtggagctt 985
>gb|AF017252.1|AF017252 Lycopersicon esculentum importin alpha (LeKAP alpha) mRNA, complete cds Length = 1907 Score = 58.0 bits (29), Expect = 4e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| ||||| ||||| || ||||| |||||||||||||| || || |||| Sbjct: 1130 atctgctacaaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatg 1189 Query: 415 ctacctccggtgg 427 |||| |||||||| Sbjct: 1190 ctacgtccggtgg 1202 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 gcatgctgggctctttcctatctctctga 39 ||||||||||||||||| ||||| ||||| Sbjct: 787 gcatgctgggctctttcatatctttctga 815
>ref|NM_180193.1| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.2 mRNA, complete cds Length = 2256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1189 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1248 Query: 306 gatcagat 313 |||||||| Sbjct: 1249 gatcagat 1256 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1299 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1358 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1359 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1417 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1418 cattatgcgatctcctggtttgcccagatccaagaatc 1455 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 1035 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 1094 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 1095 tggaaatatagttactggagatga 1118
>ref|NM_111552.3| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.1 mRNA, complete cds Length = 2330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1253 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1312 Query: 306 gatcagat 313 |||||||| Sbjct: 1313 gatcagat 1320 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1363 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1422 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1423 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1481 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1482 cattatgcgatctcctggtttgcccagatccaagaatc 1519 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 1099 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 1158 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 1159 tggaaatatagttactggagatga 1182
>emb|Y15224.1|ATIMPA1 Arabidopsis thaliana mRNA for importin alpha-like protein Impa1 Length = 1876 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1076 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1135 Query: 306 gatcagat 313 |||||||| Sbjct: 1136 gatcagat 1143 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1186 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1245 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1246 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1304 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1305 cattatgcgatctcctggtttgcccagatccaagaatc 1342 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 922 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 981 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 982 tggaaatatagttactggagatga 1005
>gb|AY125529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1599 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1018 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1077 Query: 306 gatcagat 313 |||||||| Sbjct: 1078 gatcagat 1085 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1128 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1187 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1188 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1246 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1247 cattatgcgatctcctggtttgcccagatccaagaatc 1284 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 864 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 923 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 924 tggaaatatagttactggagatga 947
>gb|AY094390.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2001 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1079 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1138 Query: 306 gatcagat 313 |||||||| Sbjct: 1139 gatcagat 1146 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1189 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1248 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1249 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1307 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1308 cattatgcgatctcctggtttgcccagatccaagaatc 1345 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 925 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 984 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 985 tggaaatatagttactggagatga 1008
>gb|AY054164.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2134 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1189 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1248 Query: 306 gatcagat 313 |||||||| Sbjct: 1249 gatcagat 1256 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1299 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1358 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1359 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1417 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1418 cattatgcgatctcctggtttgcccagatccaagaatc 1455 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 1035 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 1094 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 1095 tggaaatatagttactggagatga 1118
>gb|U69533.2|ATU69533 Arabidopsis thaliana AtKAP alpha mRNA, complete cds Length = 1940 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1018 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1077 Query: 306 gatcagat 313 |||||||| Sbjct: 1078 gatcagat 1085 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1128 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1187 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1188 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1246 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1247 cattatgcgatctcctggtttgcccagatccaagaatc 1284 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 864 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 923 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 924 tggaaatatagttactggagatga 947
>gb|AF529881.1| Plasmodium falciparum 3D7 karyopherin alpha gene, complete cds Length = 1638 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 145 gaactgttggaaatattgtcacaggagatgactcacaaac 184 ||||||||||||||||||| ||||||||||| | |||||| Sbjct: 974 gaactgttggaaatattgttacaggagatgatttacaaac 1013
>gb|AY088732.1| Arabidopsis thaliana clone 9351 mRNA, complete sequence Length = 2203 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1255 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1314 Query: 306 gatcagat 313 |||||||| Sbjct: 1315 gatcagat 1322 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1365 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1424 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1425 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1483 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1484 cattatgcgatctcctggtttgcccagatccaagaatc 1521 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 1101 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 1160 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 1161 tggaaatatagttactggagatga 1184
>gb|L81172.1|L81172 Arabidopsis thaliana importin alpha homolog mRNA, complete cds Length = 1956 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1084 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1143 Query: 306 gatcagat 313 |||||||| Sbjct: 1144 gatcagat 1151 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 930 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 989 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 990 tggaaatatagttactggagatga 1013 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 493 tttgcccagatccaagaatc 512 |||||||||||||||||||| Sbjct: 1330 tttgcccagatccaagaatc 1349
>gb|AF077528.1|AF077528 Arabidopsis thaliana importin alpha mRNA, complete cds Length = 1939 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 246 aagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaaa 305 ||||||||||| ||||| || || |||||||| ||||||| ||||| || || |||||| Sbjct: 1066 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagcaggcaacaaa 1125 Query: 306 gatcagat 313 |||||||| Sbjct: 1126 gatcagat 1133 Score = 52.0 bits (26), Expect = 0.002 Identities = 127/158 (80%), Gaps = 2/158 (1%) Strand = Plus / Plus Query: 356 tctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatgc 415 |||||| |||| ||||| ||||| || |||||||| ||||| ||||| || || ||||| Sbjct: 1176 tctgcttcaaaatgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgc 1235 Query: 416 tacctccggtggttcccatgaccaaataaagtatttggtt-agcgagggctgcatcaagc 474 || || |||||||| ||||| |||||||| || |||| ||| |||| ||||| || | Sbjct: 1236 aacttcaggtggttctcatgatcaaataaaatacctggtggagcaaggg-tgcataaaac 1294 Query: 475 cactgtgtgacctcctcctttgcccagatccaagaatc 512 || | || || ||||| |||||||||||||||||||| Sbjct: 1295 cattatgcgatctcctggtttgcccagatccaagaatc 1332 Score = 48.1 bits (24), Expect = 0.036 Identities = 69/84 (82%) Strand = Plus / Plus Query: 92 acttgtggagcttctcctccatccatcaccttcagtgcttatacctgcactacgaactgt 151 |||||| || ||||||||||||| || || || ||||| || ||||| || || ||||| Sbjct: 912 acttgttgaacttctcctccatcattctccatctgtgctaattcctgctcttcgcactgt 971 Query: 152 tggaaatattgtcacaggagatga 175 ||||||||| || || |||||||| Sbjct: 972 tggaaatatagttactggagatga 995
>ref|NM_117708.1| Arabidopsis thaliana protein transporter AT4G16143 mRNA, complete cds Length = 2013 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 912 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 971 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 972 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 1210 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 1269 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 1270 ccacttcaggtggttctcctgaccaaatcaagta 1303
>ref|XM_610101.2| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 1 (LOC531602), mRNA Length = 2132 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1198 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1240
>ref|XM_881497.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 8 (LOC531602), mRNA Length = 2304 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1082 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1124
>ref|XM_881482.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 7 (LOC531602), mRNA Length = 2423 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1201 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1243
>ref|XM_881466.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 6 (LOC531602), mRNA Length = 2159 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 937 tttcaaatatcactgctggcaacagggctcagatacaggctgt 979
>ref|XM_881449.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 5 (LOC531602), mRNA Length = 1790 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 568 tttcaaatatcactgctggcaacagggctcagatacaggctgt 610
>ref|XM_881437.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 4 (LOC531602), mRNA Length = 2793 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1198 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1240
>ref|XM_881422.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 3 (LOC531602), mRNA Length = 2420 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1198 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1240
>ref|XM_868210.1| PREDICTED: Bos taurus similar to karyopherin (importin) alpha 6 (predicted), transcript variant 2 (LOC531602), mRNA Length = 2234 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 280 tttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||||||||||||| |||| | ||||||||||||||| Sbjct: 1198 tttcaaatatcactgctggcaacagggctcagatacaggctgt 1240
>ref|NM_001008017.1| Xenopus tropicalis kpna6 protein (kpna6), mRNA Length = 2641 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 264 gaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||||||||| |||||||||| |||||||| |||| || || ||||||||||| Sbjct: 1088 gaggcctgctggacgatttcaaatattactgctggcaacagaggccaaatacaggctgt 1146
>gb|BC080896.1| Xenopus tropicalis kpna6 protein, mRNA (cDNA clone MGC:79508 IMAGE:6977195), complete cds Length = 2641 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 264 gaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||||||||| |||||||||| |||||||| |||| || || ||||||||||| Sbjct: 1088 gaggcctgctggacgatttcaaatattactgctggcaacagaggccaaatacaggctgt 1146
>gb|BT000157.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 978 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 181 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 240 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 241 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 299 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 479 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 538 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 539 ccacttcaggtggttctcctgaccaaatcaagta 572
>gb|AY136331.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1447 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 346 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 405 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 406 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 464 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 644 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 703 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 704 ccacttcaggtggttctcctgaccaaatcaagta 737
>gb|AF361811.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2014 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 912 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 971 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 972 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 1030 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 1210 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 1269 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 1270 ccacttcaggtggttctcctgaccaaatcaagta 1303
>gb|AY060529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1608 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 844 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 903 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 904 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 962 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 1142 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 1201 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 1202 ccacttcaggtggttctcctgaccaaatcaagta 1235
>emb|BX826439.1|CNS0A43E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1938 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 57 atccaatctgtgattgatgctggtgtctgtccccgacttgtggagcttctcctccatcca 116 ||||||||||| ||||| || ||||| ||| ||||| || |||||||||| |||| | Sbjct: 875 atccaatctgtcattgaggcaggtgttgttcctcgactcgtcgagcttctccagcatcaa 934 Query: 117 tcaccttcagtgcttatacctgcactacgaactgttggaaatattgtcacaggagatga 175 ||||| || |||||||| ||||| || || | | |||| || |||||||| |||||||| Sbjct: 935 tcaccatctgtgcttattcctgcccttcgtagtattggtaacattgtcactggagatga 993 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 1173 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 1232 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 1233 ccacttcaggtggttctcctgaccaaatcaagta 1266
>gb|AC122160.21| Medicago truncatula clone mth2-23d6, complete sequence Length = 125105 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 450 ttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatccaaga 509 ||||| ||| |||| ||||| ||||| |||||||| | || ||||||| ||||||||| Sbjct: 62499 ttggtgagccagggttgcattaagcctctgtgtgatttgctagtttgccctgatccaaga 62558 Query: 510 atcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 || ||||| ||||| | || ||||||||||| |||| || |||||||| Sbjct: 62559 atagttactgtttgtctagaaggtcttgagaattttctaaaggttggaga 62608 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 245 caagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaa 304 ||||||||| ||||||||||| || ||| ||||| | ||||| || || ||||| |||| Sbjct: 60507 caagaaaagtattaagaaagaagcttgcaggactttgtcaaacattacagctggaaacag 60566 Query: 305 agatcagatacagg 318 ||| |||||||||| Sbjct: 60567 agagcagatacagg 60580
>emb|AL132795.12|HSDJ412I7 Human DNA sequence from clone RP3-412I7 on chromosome 6q22.1-22.33 Contains a gene similar to murine radial spokehead-like 1, a novel gene, the KPNA5 gene for karyopherin alpha 5 (importin alpha 6) and a CpG island, complete sequence Length = 135417 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctgg 298 ||||| ||||||||||||||||| || ||||||||||| Sbjct: 119659 aaagaagcctgctggactgtttctaacatcactgctgg 119696
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 101680 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 101621 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 101620 ccacttcaggtggttctcctgaccaaatcaagta 101587 Score = 40.1 bits (20), Expect = 8.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 240 aatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggt 299 ||||| ||||| ||||| || || || || |||||||| | ||||||||||||||||| Sbjct: 101950 aatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgga 101891 Query: 300 aaca 303 |||| Sbjct: 101890 aaca 101887
>emb|Y14615.1|ATIMPA2 Arabidopsis thaliana mRNA for importin alpha-like protein 2 Length = 1741 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Plus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 1175 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 1234 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 1235 ccacttcaggtggttctcctgaccaaatcaagta 1268
>ref|NM_001030774.1| Gallus gallus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1) (LOC418271), mRNA Length = 4569 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 142 tacgaactgttggaaatattgtcacaggagatga 175 ||||| ||||||| |||||||||||||||||||| Sbjct: 1053 tacgagctgttgggaatattgtcacaggagatga 1086
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 52.0 bits (26), Expect = 0.002 Identities = 77/94 (81%) Strand = Plus / Minus Query: 355 atctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggccatctcgaatg 414 ||||||| |||| || ||||||||||| ||||| || ||||| ||||| || || |||| Sbjct: 70670 atctgcttcaaaatgcggagtttgatataaagaaagaagctgcgtgggcaatatcaaatg 70611 Query: 415 ctacctccggtggttcccatgaccaaataaagta 448 | || || |||||||| | ||||||||| ||||| Sbjct: 70610 ccacttcaggtggttctcctgaccaaatcaagta 70577 Score = 40.1 bits (20), Expect = 8.7 Identities = 53/64 (82%) Strand = Plus / Minus Query: 240 aatcacaagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggt 299 ||||| ||||| ||||| || || || || |||||||| | ||||||||||||||||| Sbjct: 70940 aatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgga 70881 Query: 300 aaca 303 |||| Sbjct: 70880 aaca 70877
>emb|AJ719373.1| Gallus gallus mRNA for hypothetical protein, clone 1l14 Length = 4569 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 142 tacgaactgttggaaatattgtcacaggagatga 175 ||||| ||||||| |||||||||||||||||||| Sbjct: 1053 tacgagctgttgggaatattgtcacaggagatga 1086
>gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete sequence Length = 119507 Score = 52.0 bits (26), Expect = 0.002 Identities = 89/110 (80%) Strand = Plus / Plus Query: 450 ttggttagcgagggctgcatcaagccactgtgtgacctcctcctttgcccagatccaaga 509 ||||| ||| |||| ||||| ||||| |||||||| | || ||||||| ||||||||| Sbjct: 44757 ttggtgagccagggttgcattaagcctctgtgtgatttgctagtttgccctgatccaaga 44816 Query: 510 atcgttacagtttgcttggagggtcttgagaacattctcaaagttggaga 559 || ||||| ||||| | || ||||||||||| |||| || |||||||| Sbjct: 44817 atagttactgtttgtctagaaggtcttgagaattttctaaaggttggaga 44866 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 245 caagaaaagcattaagaaagaggcctgctggactgtttcaaatatcactgctggtaacaa 304 ||||||||| ||||||||||| || ||| ||||| | ||||| || || ||||| |||| Sbjct: 42767 caagaaaagtattaagaaagaagcttgcaggactttgtcaaacattacagctggaaacag 42826 Query: 305 agatcagatacagg 318 ||| |||||||||| Sbjct: 42827 agagcagatacagg 42840
>ref|XM_513276.1| PREDICTED: Pan troglodytes karyopherin alpha 6 (LOC456709), mRNA Length = 1752 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1210 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1262
>ref|NM_012316.3| Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA Length = 3984 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1144 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1196
>ref|XM_544440.2| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 1 (LOC487314), mRNA Length = 2301 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||||||||||||||| |||| | ||| ||||||||||| Sbjct: 1099 tgctggaccatttcaaatatcactgctggcaacagggctcaaatacaggctgt 1151
>ref|XM_859732.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 4 (LOC487314), mRNA Length = 2095 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||||||||||||||| |||| | ||| ||||||||||| Sbjct: 1153 tgctggaccatttcaaatatcactgctggcaacagggctcaaatacaggctgt 1205
>ref|XM_859719.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 3 (LOC487314), mRNA Length = 2197 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||||||||||||||| |||| | ||| ||||||||||| Sbjct: 1153 tgctggaccatttcaaatatcactgctggcaacagggctcaaatacaggctgt 1205
>ref|XM_859701.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 2 (LOC487314), mRNA Length = 2355 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||||||||||||||| |||| | ||| ||||||||||| Sbjct: 1153 tgctggaccatttcaaatatcactgctggcaacagggctcaaatacaggctgt 1205
>gb|BT009843.1| Homo sapiens karyopherin alpha 6 (importin alpha 7) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1069 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1121
>emb|CR858533.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0723 (from clone DKFZp469C0723) Length = 3763 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1126 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1178
>dbj|AK128609.1| Homo sapiens cDNA FLJ46768 fis, clone TRACH3025316, highly similar to Importin alpha-6 subunit Length = 3937 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1120 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1172
>emb|CR592029.1| full-length cDNA clone CS0DI066YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1818 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 790 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 842
>dbj|AK002111.1| Homo sapiens cDNA FLJ11249 fis, clone PLACE1008790, highly similar to Homo sapiens importin alpha 7 subunit mRNA Length = 2206 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1144 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1196
>dbj|AB169013.1| Macaca fascicularis testis cDNA, clone: QtsA-16573, similar to human karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA, RefSeq: NM_012316.3 Length = 2228 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1139 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1191
>dbj|AB168542.1| Macaca fascicularis testis cDNA clone: QtsA-12891, similar to human karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA, RefSeq: NM_012316.3 Length = 2044 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1133 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1185
>gb|AY888861.1| Synthetic construct Homo sapiens clone FLH109799.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1069 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1121
>gb|AY888860.1| Synthetic construct Homo sapiens clone FLH109798.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1069 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1121
>gb|AY888859.1| Synthetic construct Homo sapiens clone FLH109795.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1069 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1121
>gb|AY888858.1| Synthetic construct Homo sapiens clone FLH109794.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1069 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1121
>gb|AF060543.1|AF060543 Homo sapiens importin alpha 7 subunit mRNA, complete cds Length = 1669 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1124 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1176
>gb|BC020520.1| Homo sapiens karyopherin alpha 6 (importin alpha 7), mRNA (cDNA clone MGC:17918 IMAGE:3913864), complete cds Length = 3967 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 ||||||||| |||||||||| |||||||| |||| | ||| ||||||||||| Sbjct: 1132 tgctggactatttcaaatattactgctggcaacagggctcaaatacaggctgt 1184
>ref|NM_183958.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 352 tgcatctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggc 403 |||||||| ||||| |||||||||||| |||| |||||||||| |||||| Sbjct: 1124 tgcatctgttgcaacatgctgagtttgatgtcaaaaaggaggctgtttgggc 1175
>ref|XM_875761.1| PREDICTED: Bos taurus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 8 (LOC539679), mRNA Length = 2475 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||||||||| ||||||||||||||||| Sbjct: 956 ctgttggaaacattgtcacaggagatga 983
>ref|XM_588713.2| PREDICTED: Bos taurus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 1 (LOC539679), mRNA Length = 3022 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||||||||| ||||||||||||||||| Sbjct: 1087 ctgttggaaacattgtcacaggagatga 1114
>ref|XM_865277.1| PREDICTED: Bos taurus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 2 (LOC539679), mRNA Length = 2478 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||||||||| ||||||||||||||||| Sbjct: 956 ctgttggaaacattgtcacaggagatga 983
>ref|XM_875540.1| PREDICTED: Bos taurus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 7 (LOC539679), mRNA Length = 2824 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||||||||| ||||||||||||||||| Sbjct: 1305 ctgttggaaacattgtcacaggagatga 1332
>ref|XM_875322.1| PREDICTED: Bos taurus similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 4 (LOC539679), mRNA Length = 2500 Score = 48.1 bits (24), Expect = 0.036 Identities = 27/28 (96%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||||||||| ||||||||||||||||| Sbjct: 956 ctgttggaaacattgtcacaggagatga 983
>ref|XM_705419.1| Candida albicans SC5314 karyopherin-alpha (CaO19.5682), mRNA Length = 1632 Score = 48.1 bits (24), Expect = 0.036 Identities = 36/40 (90%) Strand = Plus / Plus Query: 261 aaagaggcctgctggactgtttcaaatatcactgctggta 300 |||||||| |||||||| |||| |||||||||||||||| Sbjct: 1069 aaagaggcatgctggacaatttccaatatcactgctggta 1108
>gb|BT013674.1| Lycopersicon esculentum clone 132494R, mRNA sequence Length = 2002 Score = 48.1 bits (24), Expect = 0.036 Identities = 120/152 (78%) Strand = Plus / Plus Query: 372 gagtttgatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttcc 431 |||||||| || || ||||||||||| ||||| || || ||||| || || |||||||| Sbjct: 1210 gagtttgaaataaaaaaggaggctgcatgggcaatttcaaatgccacatctggtggttca 1269 Query: 432 catgaccaaataaagtatttggttagcgagggctgcatcaagccactgtgtgacctcctc 491 ||||| || || ||||| | ||||| | || || ||||||||| ||||||| || ||| Sbjct: 1270 catgagcagatcaagtaccttgttagtcaaggttgtatcaagccattgtgtgatcttctc 1329 Query: 492 ctttgcccagatccaagaatcgttacagtttg 523 |||| || || ||||| || || |||||||| Sbjct: 1330 atttgtcctgacccaaggattgtcacagtttg 1361 Score = 44.1 bits (22), Expect = 0.56 Identities = 43/50 (86%) Strand = Plus / Plus Query: 147 actgttggaaatattgtcacaggagatgactcacaaactcagtgcatcat 196 |||||||| |||||||| ||||||||||| ||||||||||| ||||| Sbjct: 985 actgttgggaatattgtgacaggagatgatatgcaaactcagtgtatcat 1034
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 352 tgcatctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggc 403 |||||||| ||||| |||||||||||| |||| |||||||||| |||||| Sbjct: 102554 tgcatctgttgcaacatgctgagtttgatgtcaaaaaggaggctgtttgggc 102605
>dbj|AK100070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D11, full insert sequence Length = 2226 Score = 48.1 bits (24), Expect = 0.036 Identities = 45/52 (86%) Strand = Plus / Plus Query: 352 tgcatctgctgcaaacggctgagtttgatatcaagaaggaggctgcttgggc 403 |||||||| ||||| |||||||||||| |||| |||||||||| |||||| Sbjct: 1258 tgcatctgttgcaacatgctgagtttgatgtcaaaaaggaggctgtttgggc 1309
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 531 ggtcttgagaacattctcaaagttggagagactgataag 569 |||||||||||||| ||||| ||||||||| ||||||| Sbjct: 1311172 ggtcttgagaacatcctcaaggttggagaggttgataag 1311134
>gb|BC072048.1| Xenopus laevis cDNA clone MGC:78911 IMAGE:4175643, complete cds Length = 2400 Score = 46.1 bits (23), Expect = 0.14 Identities = 50/59 (84%) Strand = Plus / Plus Query: 264 gaggcctgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||||||||| ||||||| || |||||||| |||| || || ||||||||||| Sbjct: 1091 gaggcctgctggacgatttcaaacattactgctggcaacagaggccaaatacaggctgt 1149 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| |||||||||||||| |||||||| Sbjct: 978 ctgtaggaaatattgtcactggagatga 1005
>ref|XM_570493.1| Cryptococcus neoformans var. neoformans JEC21 Importin alpha subunit (CND04770) partial mRNA Length = 2417 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 531 ggtcttgagaacattctcaaagttggagagactgataag 569 |||||||||||||| ||||| ||||||||| ||||||| Sbjct: 1391 ggtcttgagaacatcctcaaggttggagaggttgataag 1429
>ref|XM_779791.1| PREDICTED: Strongylocentrotus purpuratus similar to karyopherin (importin) alpha 6 (predicted) (LOC579689), mRNA Length = 1502 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 460 agggctgcatcaagccactgtgtgacctcct 490 |||| |||||||||||| ||||||||||||| Sbjct: 947 agggttgcatcaagccattgtgtgacctcct 977
>ref|XM_387317.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07141.1) partial mRNA Length = 1659 Score = 44.1 bits (22), Expect = 0.56 Identities = 25/26 (96%) Strand = Plus / Plus Query: 462 ggctgcatcaagccactgtgtgacct 487 |||||||||||||| ||||||||||| Sbjct: 1264 ggctgcatcaagcccctgtgtgacct 1289
>gb|AC104805.3| Homo sapiens BAC clone RP11-571N1 from 4, complete sequence Length = 164347 Score = 44.1 bits (22), Expect = 0.56 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 tcacaagaaaagcattaagaaa 263 |||||||||||||||||||||| Sbjct: 10128 tcacaagaaaagcattaagaaa 10107
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 238 aaaatcacaagaaaagcatta 258 ||||||||||||||||||||| Sbjct: 1297937 aaaatcacaagaaaagcatta 1297917
>gb|AC154486.2| Mus musculus BAC clone RP24-118H13 from chromosome 17, complete sequence Length = 197387 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 157 atattgtcacaggagatgact 177 ||||||||||||||||||||| Sbjct: 90090 atattgtcacaggagatgact 90070
>ref|XM_479607.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1921 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 1315 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 1367
>ref|XM_506585.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1165_F02.112 mRNA Length = 2417 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 1316 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 1368
>gb|BC004833.1| Mus musculus karyopherin (importin) alpha 6, mRNA (cDNA clone MGC:6524 IMAGE:2651272), complete cds Length = 2142 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1072 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1124
>ref|NM_008468.2| Mus musculus karyopherin (importin) alpha 6 (Kpna6), mRNA Length = 5692 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1141 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1193
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 68812 agatgattgatgaagcagaag 68792
>ref|XM_981743.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1 (4933426K21Rik), mRNA Length = 3001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 331 agatgattgatgaagcagaag 351
>ref|XM_981777.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 2 (4933426K21Rik), mRNA Length = 3039 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 366 agatgattgatgaagcagaag 386
>ref|XM_981812.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 3 (4933426K21Rik), mRNA Length = 3276 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 606 agatgattgatgaagcagaag 626
>ref|XM_132812.6| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1 (4933426K21Rik), mRNA Length = 4175 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 1505 agatgattgatgaagcagaag 1525
>ref|XM_001002951.1| PREDICTED: Mus musculus RIKEN cDNA 4933426K21 gene (4933426K21Rik), mRNA Length = 3317 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 647 agatgattgatgaagcagaag 667
>emb|CT010260.1| Mus musculus full open reading frame cDNA clone RZPDo836E1151D for gene Kpna6, Karyopherin (importin) alpha 6; complete cds, incl. stopcodon Length = 1602 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1060 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1112
>emb|CR450812.5| Zebrafish DNA sequence from clone CH211-161H7, complete sequence Length = 154456 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 11 gcatgctgggctctttcctatctctctga 39 ||||||||||||||||| ||||| ||||| Sbjct: 15184 gcatgctgggctctttcttatctgtctga 15212
>emb|AL161585.2|ATCHRIV81 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 81 Length = 195921 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 attactgctggaattattttt 344 ||||||||||||||||||||| Sbjct: 149853 attactgctggaattattttt 149873
>emb|AL023094.2|ATT4L20 Arabidopsis thaliana DNA chromosome 4, BAC clone T4L20 (ESSA project) Length = 125502 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 324 attactgctggaattattttt 344 ||||||||||||||||||||| Sbjct: 40164 attactgctggaattattttt 40184
>dbj|AK154882.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110I06 product:karyopherin (importin) alpha 6, full insert sequence Length = 5692 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1141 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1193
>ref|XM_683707.1| PREDICTED: Danio rerio similar to Importin alpha-7 subunit (Karyopherin alpha-6 subunit) (Importin alpha S2) (LOC560310), mRNA Length = 1560 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatgac 176 |||||||||| ||||| |||||||||||| Sbjct: 632 ctgttggaaacattgttacaggagatgac 660
>dbj|AK016936.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4933426K21 product:RIKEN cDNA 4933426K21 gene, full insert sequence Length = 1368 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 419 agatgattgatgaagcagaag 439
>dbj|AK046371.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230377C12 product:karyopherin (importin) alpha 6, full insert sequence Length = 2209 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1115 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1167
>dbj|AK084212.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230009G09 product:karyopherin (importin) alpha 6, full insert sequence Length = 2165 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1114 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1166
>dbj|AK039398.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330038M05 product:hypothetical S6 modification enzyme RimK family protein containing protein, full insert sequence Length = 3041 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 367 agatgattgatgaagcagaag 387
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 29195619 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 29195567
>emb|BX828377.1|CNS0A3TH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1509 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 324 attactgctggaattattttt 344 ||||||||||||||||||||| Sbjct: 623 attactgctggaattattttt 603
>dbj|AK173135.1| Mus musculus mRNA for mKIAA1238 protein Length = 4024 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 703 agatgattgatgaagcagaag 723
>gb|AC018682.4| Homo sapiens BAC clone RP11-417F21 from 2, complete sequence Length = 181405 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 tctggggagggaaatgtctat 602 ||||||||||||||||||||| Sbjct: 49159 tctggggagggaaatgtctat 49179
>dbj|AP003816.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1165_F02 Length = 125993 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 35693 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 35641
>gb|AC010340.7|AC010340 Homo sapiens chromosome 5 clone CTD-2010I22, complete sequence Length = 103153 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 gattactgctggaattatttttcct 347 ||||||||||| ||||||||||||| Sbjct: 54596 gattactgctgaaattatttttcct 54572
>gb|AY779030.1| Rattus norvegicus karyopherin alpha 6 (Kpna6) mRNA, complete cds Length = 1611 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1062 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1114
>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1150_E04 Length = 130973 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 130737 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 130685
>dbj|AK099611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049L13, full insert sequence Length = 1921 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 1315 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 1367
>dbj|AK068325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013146I03, full insert sequence Length = 2418 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 378 gatatcaagaaggaggctgcttgggccatctcgaatgctacctccggtggttc 430 ||||||||| |||| ||||||||||| || || |||||| | || |||||||| Sbjct: 1316 gatatcaaggaggaagctgcttgggctatatcaaatgctgcgtctggtggttc 1368
>gb|BC105813.1| Rattus norvegicus karyopherin (importin) alpha 6, mRNA (cDNA clone MGC:124892 IMAGE:7112648), complete cds Length = 2181 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1112 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1164
>gb|AF020773.1|AF020773 Mus musculus importin alpha S2 mRNA, complete cds Length = 1602 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1060 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1112
>ref|NM_001015029.2| Rattus norvegicus karyopherin (importin) alpha 6 (Kpna6), mRNA Length = 2181 Score = 42.1 bits (21), Expect = 2.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 270 tgctggactgtttcaaatatcactgctggtaacaaagatcagatacaggctgt 322 |||||||| ||||||| ||||||||||| |||| | ||| ||||||||||| Sbjct: 1112 tgctggaccatttcaaacatcactgctggcaacagggctcaaatacaggctgt 1164
>gb|BC052078.1| Mus musculus RIKEN cDNA 4933426K21 gene, transcript variant 1, mRNA (cDNA clone MGC:62496 IMAGE:6402765), complete cds Length = 2027 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 607 agatgattgatgaagcagaag 627 ||||||||||||||||||||| Sbjct: 665 agatgattgatgaagcagaag 685
>gb|AC153811.1| Homo sapiens chromosome 5 clone fa0925, complete sequence Length = 40008 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ttaagaaagaggcctgctgg 275 |||||||||||||||||||| Sbjct: 1455 ttaagaaagaggcctgctgg 1474
>gb|AC183617.3| Pan troglodytes BAC clone CH251-104G17 from chromosome 4, complete sequence Length = 172744 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 agtctgttgacagaaaatca 244 |||||||||||||||||||| Sbjct: 69666 agtctgttgacagaaaatca 69647
>ref|XM_654654.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2142.2), mRNA Length = 1662 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 cttgagaacattctcaaagttggagaga 561 ||||||||||||||||| ||||| |||| Sbjct: 1339 cttgagaacattctcaaggttggtgaga 1366
>gb|AC162789.4| Mus musculus chromosome 1, clone RP24-323I23, complete sequence Length = 170236 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 catccatcaccttcagtgct 130 |||||||||||||||||||| Sbjct: 5200 catccatcaccttcagtgct 5181
>ref|XM_535761.2| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 1 (LOC478585), mRNA Length = 3560 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| ||||| ||||||||||||||||| Sbjct: 1113 ctgtgggaaacattgtcacaggagatga 1140
>ref|XM_852469.1| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 3 (LOC478585), mRNA Length = 2659 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| ||||| ||||||||||||||||| Sbjct: 955 ctgtgggaaacattgtcacaggagatga 982
>ref|XM_852429.1| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 2 (LOC478585), mRNA Length = 3546 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| ||||| ||||||||||||||||| Sbjct: 1099 ctgtgggaaacattgtcacaggagatga 1126
>emb|AJ557449.1|XLA557449 Xenopus laevis mRNA for importin alpha 5.2 protein (imp alpha 5 gene) Length = 1614 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 264 gaggcctgctggactgtttcaaatatcactgctggtaaca 303 |||||||||||||| ||||||| || |||||||| |||| Sbjct: 1066 gaggcctgctggacaatttcaaacattactgctggcaaca 1105 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| |||||||||||||| |||||||| Sbjct: 953 ctgtaggaaatattgtcactggagatga 980
>emb|AJ557448.1|XLA557448 Xenopus laevis mRNA for importin alpha 5.1 protein (imp alpha 5 gene) Length = 1614 Score = 40.1 bits (20), Expect = 8.7 Identities = 35/40 (87%) Strand = Plus / Plus Query: 264 gaggcctgctggactgtttcaaatatcactgctggtaaca 303 |||||||||||||| ||||||| || |||||||| |||| Sbjct: 1066 gaggcctgctggacaatttcaaacattactgctggcaaca 1105 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 148 ctgttggaaatattgtcacaggagatga 175 |||| |||||||||||||| |||||||| Sbjct: 953 ctgtaggaaatattgtcactggagatga 980
>emb|CR956635.11| Pig DNA sequence from clone CH242-184L20 on chromosome 17, complete sequence Length = 211741 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 aagctcttgggtgtctcctc 224 |||||||||||||||||||| Sbjct: 104595 aagctcttgggtgtctcctc 104576
>ref|XM_798183.1| Trypanosoma cruzi strain CL Brener importin alpha (Tc00.1047053509057.20) partial mRNA Length = 1602 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 267 gcctgctggactgtttcaaatatcactgctgg 298 ||||||||||||||||| ||||| ||||||| Sbjct: 1069 gcctgctggactgtttccaatattgctgctgg 1100
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tcaagaaggaggctgcttgg 401 |||||||||||||||||||| Sbjct: 103704 tcaagaaggaggctgcttgg 103685
>ref|XM_815135.1| Trypanosoma cruzi strain CL Brener importin alpha (Tc00.1047053509965.110) partial mRNA Length = 1602 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 267 gcctgctggactgtttcaaatatcactgctgg 298 ||||||||||||||||| ||||| ||||||| Sbjct: 1069 gcctgctggactgtttccaatattgctgctgg 1100
>gb|AF465210.1| Emericella nidulans karyopherin alpha (kapA) gene, complete cds Length = 1942 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 534 cttgagaacattctcaaagttggagaga 561 ||||||||||||||||| ||||| |||| Sbjct: 1619 cttgagaacattctcaaggttggtgaga 1646
>emb|Z84468.1|HS299D3 Human DNA sequence from clone CTA-299D3 on chromosome 22q13.3, complete sequence Length = 90736 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 589 agggaaatgtctatgcacag 608 |||||||||||||||||||| Sbjct: 85928 agggaaatgtctatgcacag 85909
>emb|BX005133.4| Human DNA sequence from clone DASS-103C7 on chromosome 6, complete sequence Length = 96209 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 62247 tccatcaccttcagtgctta 62228
>emb|AL732432.3| Human DNA sequence from clone XXbac-92J3 on chromosome 6 contains the OR5V1 and OR12D3 genes for olfactory receptor, family 5, subfamily V, member 1 and family 12, subfamily D, member 3, complete sequence Length = 52664 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 32810 tccatcaccttcagtgctta 32791
>emb|AL662781.4| Human DNA sequence from clone XXbac-1H2 on chromosome 6 contains the OR5U1, OR5V1 and OR12D3 genes for olfactory receptor, family 5, subfamily U, member1, subfamily V, member 1 and family 12, subfamily D, member 3, the OR2B4P pseudogene for olfactory receptor, family 2, subfamily B, member 4 and a DEAD/H box polypeptide 6 (DDX6) pseudogene, complete sequence Length = 106642 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 89968 tccatcaccttcagtgctta 89949
>emb|AL391538.11| Human DNA sequence from clone RP11-334H12 on chromosome 6, complete sequence Length = 131459 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 333 ggaattatttttcctttggtgcat 356 |||||||||||||||||| ||||| Sbjct: 61885 ggaattatttttcctttgatgcat 61862
>emb|AL031323.1|SPCC962 S.pombe chromosome III cosmid c962 Length = 16137 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 ggaaatattgtcacaggagatgac 176 ||||||||||| |||||||||||| Sbjct: 6960 ggaaatattgttacaggagatgac 6937
>gb|AC162922.4| Mus musculus BAC clone RP23-314M6 from chromosome 3, complete sequence Length = 245207 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aagaaaagcattaagaaaga 265 |||||||||||||||||||| Sbjct: 143753 aagaaaagcattaagaaaga 143734
>emb|CR388393.8| Human DNA sequence from clone DADB-136A24 on chromosome 6, complete sequence Length = 159366 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 6924 tccatcaccttcagtgctta 6905
>gb|AC016883.14| Homo sapiens chromosome 8, clone RP11-327N12, complete sequence Length = 180682 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 325 ttactgctggaattatttttcctttggtgcat 356 ||||| ||||| ||||||||||||| |||||| Sbjct: 146828 ttactcctggatttatttttccttttgtgcat 146859
>emb|CR759808.2| Human DNA sequence from clone DAMC-143C14 on chromosome 6, complete sequence Length = 104964 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 75534 tccatcaccttcagtgctta 75515
>gb|BC112869.1| Bos taurus presenilin associated, rhomboid-like, mRNA (cDNA clone MGC:137354 IMAGE:8171147), complete cds Length = 1368 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cttgtggagcttctcctcca 112 |||||||||||||||||||| Sbjct: 688 cttgtggagcttctcctcca 707
>gb|AC105389.3| Homo sapiens BAC clone RP11-227F19 from 4, complete sequence Length = 187067 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 ctcctccatccatcaccttc 124 |||||||||||||||||||| Sbjct: 162922 ctcctccatccatcaccttc 162903
>dbj|AK149973.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530110N23 product:unclassifiable, full insert sequence Length = 2304 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 catccatcaccttcagtgct 130 |||||||||||||||||||| Sbjct: 1566 catccatcaccttcagtgct 1585
>gb|AC129293.9| Mus musculus BAC clone RP24-535M14 from chromosome 3, complete sequence Length = 163981 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 246 aagaaaagcattaagaaaga 265 |||||||||||||||||||| Sbjct: 3573 aagaaaagcattaagaaaga 3554
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 catccatcaccttcagtgct 130 |||||||||||||||||||| Sbjct: 226030 catccatcaccttcagtgct 226011
>ref|NM_001022860.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC962.03c), partial mRNA Length = 1629 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ggaaatattgtcacaggagatgac 176 ||||||||||| |||||||||||| Sbjct: 943 ggaaatattgttacaggagatgac 966
>emb|BX927232.4| Human DNA sequence from clone DAMA-334F21 on chromosome 6, complete sequence Length = 99722 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 73372 tccatcaccttcagtgctta 73353
>gb|AC116374.10| Mus musculus chromosome 1, clone RP23-294I9, complete sequence Length = 179835 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 catccatcaccttcagtgct 130 |||||||||||||||||||| Sbjct: 79732 catccatcaccttcagtgct 79713
>gb|AC018878.8| Homo sapiens BAC clone RP11-297N12 from 2, complete sequence Length = 170801 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 tgtgacctcctcctttgccc 499 |||||||||||||||||||| Sbjct: 14055 tgtgacctcctcctttgccc 14074
>ref|NM_001015596.1| Bos taurus presenilin associated, rhomboid-like (PSARL), mRNA Length = 1345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cttgtggagcttctcctcca 112 |||||||||||||||||||| Sbjct: 680 cttgtggagcttctcctcca 699
>gb|AC079945.21| Homo sapiens 3 BAC RP11-689D3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 149249 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 agaaaagcattaagaaagaggcct 270 |||||||||| ||||||||||||| Sbjct: 103684 agaaaagcatcaagaaagaggcct 103707
>ref|XM_221867.3| PREDICTED: Rattus norvegicus similar to hypothetical protein CG003 (predicted) (LOC304244), mRNA Length = 11613 Score = 40.1 bits (20), Expect = 8.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 260 gaaagaggcctgctggactgtttcaaat 287 ||||| ||||||||||||||| |||||| Sbjct: 2188 gaaaggggcctgctggactgtgtcaaat 2215
>gb|AC104370.7| Homo sapiens chromosome 8, clone RP11-367L7, complete sequence Length = 169460 Score = 40.1 bits (20), Expect = 8.7 Identities = 29/32 (90%) Strand = Plus / Plus Query: 325 ttactgctggaattatttttcctttggtgcat 356 ||||| ||||| ||||||||||||| |||||| Sbjct: 14859 ttactcctggatttatttttccttttgtgcat 14890
>dbj|AK186622.1| Mus musculus cDNA, clone:Y0G0138B06, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000000804, based on BLAT search Length = 338 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 ctctttcctatctctctgag 40 |||||||||||||||||||| Sbjct: 321 ctctttcctatctctctgag 302
>gb|AC116493.10| Homo sapiens chromosome 17, clone CTD-3147F3, complete sequence Length = 94420 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ttaagaaagaggcctgctgg 275 |||||||||||||||||||| Sbjct: 16331 ttaagaaagaggcctgctgg 16350
>gb|BT020676.1| Bos taurus presenilin associated, rhomboid-like (PSARL), mRNA, complete cds Length = 1345 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 cttgtggagcttctcctcca 112 |||||||||||||||||||| Sbjct: 680 cttgtggagcttctcctcca 699
>emb|AL096770.17|HSBA150A6 Human DNA sequence from clone RP11-150A6 on chromosome 6 Contains genes OR5U1, OR5V1 and OR12D3 for olfactory receptors 5U1, 5V1 and 12D3, the 3' end of olfactory receptor 2B4 pseudogene OR2B4P, a DDX6 (DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 6 (RNA helicase, 54kD)) pseudogene, STSs and GSSs, complete sequence Length = 97392 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 tccatcaccttcagtgctta 132 |||||||||||||||||||| Sbjct: 84659 tccatcaccttcagtgctta 84640
>gb|L36339.1|XLIMPA1A Xenopus laevis importin alpha 1a mRNA, complete cds Length = 1673 Score = 40.1 bits (20), Expect = 8.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 actgttggaaatattgtcac 166 |||||||||||||||||||| Sbjct: 960 actgttggaaatattgtcac 979
>emb|AL449215.3|HS352H24 Homo sapiens chromosome 3 sequence from BAC 352H24 map 3q21 region D3S3607-D3S1587, complete sequence Length = 134296 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 agaaaagcattaagaaagaggcct 270 |||||||||| ||||||||||||| Sbjct: 43497 agaaaagcatcaagaaagaggcct 43474
>dbj|AB010574.1| Schizosaccharomyces pombe gene for Cut15, complete cds Length = 2238 Score = 40.1 bits (20), Expect = 8.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ggaaatattgtcacaggagatgac 176 ||||||||||| |||||||||||| Sbjct: 1177 ggaaatattgttacaggagatgac 1200 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,786,470 Number of Sequences: 3902068 Number of extensions: 6786470 Number of successful extensions: 144481 Number of sequences better than 10.0: 199 Number of HSP's better than 10.0 without gapping: 200 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 143791 Number of HSP's gapped (non-prelim): 660 length of query: 638 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 615 effective length of database: 17,143,297,704 effective search space: 10543128087960 effective search space used: 10543128087960 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
