ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9a23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1) 32 1.0
2LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only... 30 5.0
3CPLX1_HUMAN (O14810) Complexin-1 (Synaphin-2) 30 5.0
4M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kina... 30 6.6
5M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kina... 30 6.6
6CPLX1_RAT (P63041) Complexin-1 (Synaphin-2) 30 6.6
7CPLX1_MOUSE (P63040) Complexin-1 (Synaphin-2) (921-S) 30 6.6
8XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte ... 30 6.6
9CPLX2_RAT (P84087) Complexin-2 (Synaphin-1) 29 8.6
10CPLX2_MOUSE (P84086) Complexin-2 (Synaphin-1) (921-L) 29 8.6
11CPLX2_HUMAN (Q6PUV4) Complexin-2 (Synaphin-1) 29 8.6
12CPLX2_BOVIN (P84088) Complexin-2 (Synaphin-1) 29 8.6

>TNIK_HUMAN (Q9UKE5) TRAF2 and NCK-interacting kinase (EC 2.7.11.1)|
          Length = 1360

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = +1

Query: 313 EGSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERETAQA 444
           E  E+RR   EQ  RE++   +Q  E+RR   EQ  RE E  +A
Sbjct: 397 EQKEQRRRLEEQQRREKELRKQQEREQRRHYEEQMRREEERRRA 440



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>LMO7_HUMAN (Q8WWI1) LIM domain only protein 7 (LOMP) (F-box only protein 20)|
          Length = 1683

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +1

Query: 322  EERRAKIEQWNRERDAPARQGSEERRAKI-EQWNRERETAQ 441
            EE R + E+W +E+D   ++  +  + K+ E+W R ++ A+
Sbjct: 1228 EEERKRQERWQKEQDRLLQEKYQREQEKLREEWQRAKQEAE 1268



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>CPLX1_HUMAN (O14810) Complexin-1 (Synaphin-2)|
          Length = 134

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERETAQ 441
           G EE+     +   ER    RQ  EER+AK  +   ERE  +
Sbjct: 22  GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAEREAVR 63



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>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1239

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 322 EERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           E+RR   EQ  RER+A  +Q  E+RR + E+  R  E
Sbjct: 404 EQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEE 440



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>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4|
           (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK
           kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK)
           (Nck-interacting kinase)
          Length = 1233

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 322 EERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           E+RR   EQ  RER+A  +Q  E+RR + E+  R  E
Sbjct: 403 EQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEE 439



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>CPLX1_RAT (P63041) Complexin-1 (Synaphin-2)|
          Length = 134

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+     +   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60



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>CPLX1_MOUSE (P63040) Complexin-1 (Synaphin-2) (921-S)|
          Length = 134

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+     +   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GDEEKDPDAAKKEEERQEALRQAEEERKAKYAKMEAERE 60



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>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 322 EERRAKIEQWNRERDAPARQGSEERRAK-IEQWNRERE 432
           E  + + EQ  RE++A  RQ +EER+ K +E+  RER+
Sbjct: 280 ELEQQREEQKRREKEAEERQRAEERKQKELEELERERK 317



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>CPLX2_RAT (P84087) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+    ++   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60



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>CPLX2_MOUSE (P84086) Complexin-2 (Synaphin-1) (921-L)|
          Length = 134

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+    ++   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60



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>CPLX2_HUMAN (Q6PUV4) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+    ++   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60



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>CPLX2_BOVIN (P84088) Complexin-2 (Synaphin-1)|
          Length = 134

 Score = 29.3 bits (64), Expect = 8.6
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +1

Query: 316 GSEERRAKIEQWNRERDAPARQGSEERRAKIEQWNRERE 432
           G EE+    ++   ER    RQ  EER+AK  +   ERE
Sbjct: 22  GEEEKDPDAQKKEEERQEALRQQEEERKAKHARMEAERE 60


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,158,595
Number of Sequences: 219361
Number of extensions: 558089
Number of successful extensions: 1802
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1782
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4986986160
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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