ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9a23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, comple... 783 0.0
2gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
3emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary f... 109 1e-20
4dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
5dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
6gb|AY104397.1| Zea mays PCO152838 mRNA sequence 78 4e-11
7gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
8emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary f... 72 2e-09
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
10dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
11dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
12ref|NM_191929.1| Oryza sativa (japonica cultivar-group), predic... 64 5e-07
13dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
14dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
15gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, com... 44 0.51
16gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, co... 44 0.51
17gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence 44 0.51
18gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, com... 44 0.51
19gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosom... 44 0.51
20dbj|AK082466.1| Mus musculus 0 day neonate cerebellum cDNA, RIKE... 44 0.51
21ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid... 42 2.0
22gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosom... 42 2.0
23gb|BC098097.1| Mus musculus numb-like, mRNA (cDNA clone MGC:1066... 42 2.0
24gb|BC068116.1| Mus musculus numb-like, mRNA (cDNA clone MGC:9295... 42 2.0
25gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.0
26gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.0
27gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary ... 42 2.0
28gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, co... 42 2.0
29gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 42 2.0
30dbj|AB210107.1| Rattus norvegicus Numbl mRNA for Numb-like, comp... 42 2.0
31gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, comp... 42 2.0
32dbj|AK147523.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 42 2.0
33gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small su... 42 2.0
34ref|NM_010950.2| Mus musculus numb-like (Numbl), mRNA 42 2.0
35gb|BC059915.1| Mus musculus numb-like, mRNA (cDNA clone IMAGE:68... 42 2.0
36emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Co... 42 2.0
37emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Co... 42 2.0
38gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana... 42 2.0
39gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete se... 42 2.0
40gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 ... 42 2.0
41gb|U96441.1|MMU96441 Mus musculus Numblike (m-nbl) mRNA, complet... 42 2.0
42emb|AJ718146.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-350A... 42 2.0
43emb|AJ718087.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-22-28... 42 2.0
44ref|NM_001033888.1| Rattus norvegicus numb-like (Numbl), mRNA 42 2.0
45ref|XM_866497.1| PREDICTED: Bos taurus similar to solute carrier... 40 7.9
46ref|NM_138734.1| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 7.9
47ref|NM_138732.1| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 7.9
48ref|NM_015080.2| Homo sapiens neurexin 2 (NRXN2), transcript var... 40 7.9
49ref|XM_845026.1| PREDICTED: Canis familiaris similar to ribosoma... 40 7.9
50gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, comp... 40 7.9
51gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome... 40 7.9
52emb|AL135901.23| Human DNA sequence from clone RP11-432M24 on ch... 40 7.9
53gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, comp... 40 7.9
54ref|NM_137678.2| Drosophila melanogaster Ipk1 CG30295-RA (Ipk1),... 40 7.9
55gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park C... 40 7.9
56ref|NM_006517.2| Homo sapiens solute carrier family 16 (monocarb... 40 7.9
57gb|AY061821.1| Drosophila melanogaster GH07317 full length cDNA 40 7.9
58emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, c... 40 7.9
59gb|AC012388.5| Drosophila melanogaster, chromosome 2R, region 57... 40 7.9
60gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141... 40 7.9
61gb|AC008289.5|AC008289 Drosophila melanogaster, chromosome 2R, r... 40 7.9
62gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, r... 40 7.9
63gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Ca... 40 7.9
64dbj|AB177862.1| Homo sapiens mRNA for KIAA0921 splice variant 1 40 7.9
65gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequ... 40 7.9
66gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60... 40 7.9
67dbj|AB085789.1| Homo sapiens xpct mRNA for X-linked PEST-contain... 40 7.9
68dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
69dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.9
70gb|AC004433.1|AC004433 Drosophila melanogaster, chromosome 2R, r... 40 7.9
71gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, comple... 40 7.9
72gb|AC004073.1|AC004073 Human Chromosome X, complete sequence 40 7.9
73gb|U05316.1|HSXPCT1 Human X-linked PEST-containing transporter (... 40 7.9
74gb|U05315.1|HSU05315 Human X-linked PEST-containing transporter ... 40 7.9
75gb|L81684.1|HSL81684 Homo sapiens (subclone 1_e11 from P1 H54) D... 40 7.9
76gb|AD000685.1|CH19R25187 Homo sapiens DNA from chromosome 19p13.... 40 7.9
77gb|L13122.1|HUMTANDH Human tandem repeat polymorphism 40 7.9
78dbj|AB035266.1| Homo sapiens mRNA for neurexin II, complete cds 40 7.9 
>gb|DQ019634.1| Triticum aestivum U2AF small subunit mRNA, complete cds
          Length = 1199

 Score =  783 bits (395), Expect = 0.0
 Identities = 532/575 (92%), Gaps = 2/575 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgcaacttcatgcatgtcaaacagnattggcagggnacctgaggaagaggctgtatggg 60
            |||||||||||||||||||||  || || ||||||| |||||||||||||||||||||||
Sbjct: 504  ctgcaacttcatgcatgtcaaggag-ataggcaggg-acctgaggaagaggctgtatggg 561

                                                                        
Query: 61   cacctgcatagctccaggaggagccacagcaggagcagccggagcccaagcccctaccgt 120
            ||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 562  cacctgcataggtccgggaggagccacagcaggagcagccggagcccgagcccctaccgt 621

                                                                        
Query: 121  caccacgccagggaccgtgatcgctcctcacggtctaaggaccgtggcgattactatgga 180
            ||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||
Sbjct: 622  caccatgccagggaccgtgatcgctcctcacggtctagggaccgcggcgactactatgga 681

                                                                        
Query: 181  ggcagcctggaccgtggtgactatggcgactactaccaccatagccggaggagcagcgag 240
            || ||| |||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 682  ggtagcttggaccgtggcgactatggtgactactaccaccatagccggaggagcagcgag 741

                                                                        
Query: 241  aggaatcgcaactatgacagcgatgggagcaggcgccggcgacacaggtctagaactagg 300
            ||||| |||||||||||||| |||||||||||| |||||||||||||||| || ||||||
Sbjct: 742  aggaaccgcaactatgacagtgatgggagcaggtgccggcgacacaggtccaggactagg 801

                                                                        
Query: 301  agcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgtgaa 360
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802  agccccgtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgtgaa 861

                                                                        
Query: 361  agggatgcgcctgccaggcagggcagcgaggagaggagggcgaagatcgagcagtggaac 420
            ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 862  agggaggcgcctgccaggcagggcagcgaagagaggagggcgaagatcgatcagtggaac 921

                                                                        
Query: 421  cgtgaaagggagacggctcaggcctgagatctccggtctgactgcaggttacagtgttgc 480
            ||||| |||||||| |||||||| |||||||||| |||||||||||||||  ||||||||
Sbjct: 922  cgtgagagggagactgctcaggcgtgagatctcctgtctgactgcaggttgaagtgttgc 981

                                                                        
Query: 481  cttgttcacaggatgttctgcttgcttatctgatcttgtaatgttagatggagttagatt 540
            ||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||| |
Sbjct: 982  cttgttcaccggatgttctgcttgcttgtctgatcgtgtaatggtagatggagttagaat 1041

                                               
Query: 541  gttgccctagtgaacttactcagatgcctcatgta 575
             | | |||||||||||| ||  ||||||| |||||
Sbjct: 1042 ttggtcctagtgaacttgcttggatgcctgatgta 1076
to top
>gb|AC108762.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone
             OSJNBb0052C07, complete sequence
          Length = 154528

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Minus

                                                                         
Query: 222   tagccggaggagcagcgagaggaatcgcaac---tatgacagcgatgggagcaggcgccg 278
             |||||||||||||||||||||| | |||| |   || ||||||||||| |||||||| ||
Sbjct: 53649 tagccggaggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcg 53590

                                                                         
Query: 279   gcgacacaggtctagaactaggagcccggtcagggagggcagcgaggagaggagggcgaa 338
             ||   ||||||| || |||||||| || |||||||| || |||||||||||||| ||  |
Sbjct: 53589 gc---acaggtccaggactaggagtcctgtcagggatggtagcgaggagaggagagctca 53533

                                        
Query: 339   gattgagcagtggaaccgtgaaaggga 365
              ||||||||||||||||||||||||||
Sbjct: 53532 aattgagcagtggaaccgtgaaaggga 53506



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Minus

                                                                         
Query: 1     ctgcaacttcatgcatgtcaaacagnattggcagggnacctgaggaagaggctgtatggg 60
             ||||||||||||||| |||||  || || ||||| | |||||||||||||| ||| ||||
Sbjct: 53862 ctgcaacttcatgcacgtcaaggag-atcggcagag-acctgaggaagaggttgtttggg 53805

                                       
Query: 61    cacctgcatagctccaggaggagcca 86
             ||||||||||| ||| |||| |||||
Sbjct: 53804 cacctgcataggtcccggagaagcca 53779



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 385   agcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
             |||||||||||||| ||  | || ||||||||||||||||||||||||
Sbjct: 53552 agcgaggagaggagagctcaaattgagcagtggaaccgtgaaagggag 53505
to top
>emb|Y18349.1|OSA18349 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35a
          Length = 1277

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                        
Query: 222  tagccggaggagcagcgagaggaatcgcaac---tatgacagcgatgggagcaggcgccg 278
            |||||||||||||||||||||| | |||| |   || ||||||||||| |||||||| ||
Sbjct: 925  tagccggaggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcg 984

                                                                        
Query: 279  gcgacacaggtctagaactaggagcccggtcagggagggcagcgaggagaggagggcgaa 338
            ||   ||||||| || |||||||| || |||||||| || |||||||||||||| ||  |
Sbjct: 985  gc---acaggtccaggactaggagtcctgtcagggatggtagcgaggagaggagagctca 1041

                                       
Query: 339  gattgagcagtggaaccgtgaaaggga 365
             ||||||||||||||||||||||||||
Sbjct: 1042 aattgagcagtggaaccgtgaaaggga 1068



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcaacttcatgcatgtcaaacagnattggcagggnacctgaggaagaggctgtatggg 60
           ||||||||||||||| |||||  || || ||||| | |||||||||||||| ||| ||||
Sbjct: 712 ctgcaacttcatgcacgtcaaggag-atcggcagag-acctgaggaagaggttgtttggg 769

                                     
Query: 61  cacctgcatagctccaggaggagcca 86
           ||||||||||| ||| |||| |||||
Sbjct: 770 cacctgcataggtcccggagaagcca 795



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 385  agcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            |||||||||||||| ||  | || ||||||||||||||||||||||||
Sbjct: 1022 agcgaggagaggagagctcaaattgagcagtggaaccgtgaaagggag 1069
to top
>dbj|AK099481.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G09, full
            insert sequence
          Length = 1499

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                        
Query: 222  tagccggaggagcagcgagaggaatcgcaac---tatgacagcgatgggagcaggcgccg 278
            |||||||||||||||||||||| | |||| |   || ||||||||||| |||||||| ||
Sbjct: 1146 tagccggaggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcg 1205

                                                                        
Query: 279  gcgacacaggtctagaactaggagcccggtcagggagggcagcgaggagaggagggcgaa 338
            ||   ||||||| || |||||||| || |||||||| || |||||||||||||| ||  |
Sbjct: 1206 gc---acaggtccaggactaggagtcctgtcagggatggtagcgaggagaggagagctca 1262

                                       
Query: 339  gattgagcagtggaaccgtgaaaggga 365
             ||||||||||||||||||||||||||
Sbjct: 1263 aattgagcagtggaaccgtgaaaggga 1289



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                        
Query: 1    ctgcaacttcatgcatgtcaaacagnattggcagggnacctgaggaagaggctgtatggg 60
            ||||||||||||||| |||||  || || ||||| | |||||||||||||| ||| ||||
Sbjct: 933  ctgcaacttcatgcacgtcaaggag-atcggcagag-acctgaggaagaggttgtttggg 990

                                      
Query: 61   cacctgcatagctccaggaggagcca 86
            ||||||||||| ||| |||| |||||
Sbjct: 991  cacctgcataggtcccggagaagcca 1016



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 385  agcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            |||||||||||||| ||  | || ||||||||||||||||||||||||
Sbjct: 1243 agcgaggagaggagagctcaaattgagcagtggaaccgtgaaagggag 1290
to top
>dbj|AK062560.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-E06, full
            insert sequence
          Length = 1257

 Score =  109 bits (55), Expect = 1e-20
 Identities = 125/147 (85%), Gaps = 6/147 (4%)
 Strand = Plus / Plus

                                                                        
Query: 222  tagccggaggagcagcgagaggaatcgcaac---tatgacagcgatgggagcaggcgccg 278
            |||||||||||||||||||||| | |||| |   || ||||||||||| |||||||| ||
Sbjct: 936  tagccggaggagcagcgagaggcaccgcagcagctacgacagcgatggcagcaggcggcg 995

                                                                        
Query: 279  gcgacacaggtctagaactaggagcccggtcagggagggcagcgaggagaggagggcgaa 338
            ||   ||||||| || |||||||| || |||||||| || |||||||||||||| ||  |
Sbjct: 996  gc---acaggtccaggactaggagtcctgtcagggatggtagcgaggagaggagagctca 1052

                                       
Query: 339  gattgagcagtggaaccgtgaaaggga 365
             ||||||||||||||||||||||||||
Sbjct: 1053 aattgagcagtggaaccgtgaaaggga 1079



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 74/86 (86%), Gaps = 2/86 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctgcaacttcatgcatgtcaaacagnattggcagggnacctgaggaagaggctgtatggg 60
           ||||||||||||||| |||||  || || ||||| | |||||||||||||| ||| ||||
Sbjct: 723 ctgcaacttcatgcacgtcaaggag-atcggcagag-acctgaggaagaggttgtttggg 780

                                     
Query: 61  cacctgcatagctccaggaggagcca 86
           ||||||||||| ||| |||| |||||
Sbjct: 781 cacctgcataggtcccggagaagcca 806



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                            
Query: 385  agcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            |||||||||||||| ||  | || ||||||||||||||||||||||||
Sbjct: 1033 agcgaggagaggagagctcaaattgagcagtggaaccgtgaaagggag 1080
to top
>gb|AY104397.1| Zea mays PCO152838 mRNA sequence
          Length = 653

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 298 aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
           |||||||| ||||||||  ||||||||||| | ||||| |||||||||||||||||||||
Sbjct: 146 aggagcccagtcagggaaagcagcgaggagcgaagggccaagattgagcagtggaaccgt 205

              
Query: 358 gaa 360
           |||
Sbjct: 206 gaa 208



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 383 gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaa 426
           ||||||||||| | ||||| ||||| ||||||||||||||||||
Sbjct: 165 gcagcgaggagcgaagggccaagattgagcagtggaaccgtgaa 208
to top
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0053D02, complete sequence
          Length = 157106

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                         
Query: 298   aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
             |||||||| ||||||||  ||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 92619 aggagcccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgt 92678

                     
Query: 358   gaaaggga 365
             ||| ||||
Sbjct: 92679 gaacggga 92686



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 383   gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
             ||||||||||  | ||||||||||| || ||||||||||||||| |||||
Sbjct: 92638 gcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgggag 92687
to top
>emb|Y18348.1|OSA18348 Oryza sativa mRNA for U2 snRNP auxiliary factor, small subunit 35b
          Length = 1289

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 298  aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
            |||||||| ||||||||  ||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 970  aggagcccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgt 1029

                    
Query: 358  gaaaggga 365
            ||| ||||
Sbjct: 1030 gaacggga 1037



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 383  gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            ||||||||||  | ||||||||||| || ||||||||||||||| |||||
Sbjct: 989  gcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgggag 1038
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 298      aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
                |||||||| ||||||||  ||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 27862202 aggagcccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgt 27862261

                        
Query: 358      gaaaggga 365
                ||| ||||
Sbjct: 27862262 gaacggga 27862269



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 383      gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
                ||||||||||  | ||||||||||| || ||||||||||||||| |||||
Sbjct: 27862221 gcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgggag 27862270
to top
>dbj|AK104767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A01, full
            insert sequence
          Length = 1287

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 298  aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
            |||||||| ||||||||  ||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 966  aggagcccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgt 1025

                    
Query: 358  gaaaggga 365
            ||| ||||
Sbjct: 1026 gaacggga 1033



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 383  gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            ||||||||||  | ||||||||||| || ||||||||||||||| |||||
Sbjct: 985  gcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgggag 1034
to top
>dbj|AK070198.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041B11, full
            insert sequence
          Length = 1309

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                        
Query: 298  aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
            |||||||| ||||||||  ||||||||||  | |||||||||||||| ||||||||||||
Sbjct: 977  aggagcccagtcagggaaagcagcgaggaacgcagggcgaagattgaacagtggaaccgt 1036

                    
Query: 358  gaaaggga 365
            ||| ||||
Sbjct: 1037 gaacggga 1044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                              
Query: 383  gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaagggag 432
            ||||||||||  | ||||||||||| || ||||||||||||||| |||||
Sbjct: 996  gcagcgaggaacgcagggcgaagattgaacagtggaaccgtgaacgggag 1045
to top
>ref|NM_191929.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2106

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 298 aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
           ||||| || ||||||||| ||||||||||| | ||||| ||||| || |||||||| |||
Sbjct: 687 aggagtccagtcagggagagcagcgaggagcgcagggccaagatcgaacagtggaatcgt 746

                   
Query: 358 gaaaggga 365
           ||||||||
Sbjct: 747 gaaaggga 754



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                            
Query: 383 gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaaggga 431
           ||||||||||| | ||||| |||||||| |||||||| |||||||||||
Sbjct: 706 gcagcgaggagcgcagggccaagatcgaacagtggaatcgtgaaaggga 754
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                            
Query: 298      aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
                ||||| || ||||||||| ||||||||||| | ||||| ||||| || |||||||| |||
Sbjct: 27310897 aggagtccagtcagggagagcagcgaggagcgcagggccaagatcgaacagtggaatcgt 27310838

                        
Query: 358      gaaaggga 365
                ||||||||
Sbjct: 27310837 gaaaggga 27310830



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                                 
Query: 383      gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaaggga 431
                ||||||||||| | ||||| |||||||| |||||||| |||||||||||
Sbjct: 27310878 gcagcgaggagcgcagggccaagatcgaacagtggaatcgtgaaaggga 27310830
to top
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0063G05
          Length = 182681

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 59/68 (86%)
 Strand = Plus / Minus

                                                                         
Query: 298   aggagcccggtcagggagggcagcgaggagaggagggcgaagattgagcagtggaaccgt 357
             ||||| || ||||||||| ||||||||||| | ||||| ||||| || |||||||| |||
Sbjct: 91414 aggagtccagtcagggagagcagcgaggagcgcagggccaagatcgaacagtggaatcgt 91355

                     
Query: 358   gaaaggga 365
             ||||||||
Sbjct: 91354 gaaaggga 91347



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 383   gcagcgaggagaggagggcgaagatcgagcagtggaaccgtgaaaggga 431
             ||||||||||| | ||||| |||||||| |||||||| |||||||||||
Sbjct: 91395 gcagcgaggagcgcagggccaagatcgaacagtggaatcgtgaaaggga 91347
to top
>gb|AC129545.5| Mus musculus chromosome 1, clone RP23-264E23, complete sequence
          Length = 180431

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 309    cagggagggcagcgaggagagg 330
              ||||||||||||||||||||||
Sbjct: 156695 cagggagggcagcgaggagagg 156674
to top
>gb|AC131995.14| Mus musculus chromosome 1, clone RP24-338G10, complete sequence
          Length = 153731

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 309    cagggagggcagcgaggagagg 330
              ||||||||||||||||||||||
Sbjct: 138039 cagggagggcagcgaggagagg 138060
to top
>gb|BT014022.1| Lycopersicon esculentum clone 133084R, mRNA sequence
          Length = 1449

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 325 gagaggagggcgaagattgagcagtggaac 354
           ||||||||||| ||||||||||| ||||||
Sbjct: 929 gagaggagggcaaagattgagcaatggaac 958
to top
>gb|AC115863.17| Mus musculus chromosome 9, clone RP24-295J1, complete sequence
          Length = 174095

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 74     ccaggaggagccacagcaggagcagc 99
              |||| |||||||||||||||||||||
Sbjct: 132268 ccagcaggagccacagcaggagcagc 132293
to top
>gb|AC163350.4| Mus musculus BAC clone RP23-186B12 from chromosome 9, complete sequence
          Length = 203468

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 74     ccaggaggagccacagcaggagcagc 99
              |||| |||||||||||||||||||||
Sbjct: 178996 ccagcaggagccacagcaggagcagc 178971
to top
>dbj|AK082466.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:C230053D17
            product:unclassifiable, full insert sequence
          Length = 2246

 Score = 44.1 bits (22), Expect = 0.51
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 74   ccaggaggagccacagcaggagcagc 99
            |||| |||||||||||||||||||||
Sbjct: 1916 ccagcaggagccacagcaggagcagc 1891
to top
>ref|NM_102530.2| Arabidopsis thaliana RNA binding / nucleic acid binding AT1G27650
            mRNA, complete cds
          Length = 1381

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 998  gaggagaggagggcaaggattgagcaatggaac 1030
to top
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete
             sequence
          Length = 208462

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 80    ggagccacagcaggagcagccggagccca 108
             |||||||| |||| |||||||||||||||
Sbjct: 37108 ggagccaccgcagaagcagccggagccca 37080
to top
>gb|BC098097.1| Mus musculus numb-like, mRNA (cDNA clone MGC:106676 IMAGE:6403012),
           complete cds
          Length = 2607

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 780 aggagccacagcaggagcagc 760
to top
>gb|BC068116.1| Mus musculus numb-like, mRNA (cDNA clone MGC:92955 IMAGE:6809443),
           complete cds
          Length = 2571

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 766 aggagccacagcaggagcagc 746
to top
>gb|AF344324.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
           mRNA, complete cds
          Length = 891

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 322 gaggagaggagggcgaagattgagcagtggaac 354
           |||||||||||||| | ||||||||| ||||||
Sbjct: 823 gaggagaggagggcaaggattgagcaatggaac 855
to top
>gb|AY096507.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor protein
           (At1g27650) mRNA, complete cds
          Length = 922

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 322 gaggagaggagggcgaagattgagcagtggaac 354
           |||||||||||||| | ||||||||| ||||||
Sbjct: 823 gaggagaggagggcaaggattgagcaatggaac 855
to top
>gb|AY065202.1| Arabidopsis thaliana putative U2 snRNP auxiliary factor (At1g27650)
            mRNA, complete cds
          Length = 1306

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 970  gaggagaggagggcaaggattgagcaatggaac 1002
to top
>gb|AC157561.10| Mus musculus chromosome 7, clone RP23-356A20, complete sequence
          Length = 232927

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 79     aggagccacagcaggagcagc 99
              |||||||||||||||||||||
Sbjct: 102999 aggagccacagcaggagcagc 102979
to top
>gb|AY122894.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 891

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 322 gaggagaggagggcgaagattgagcagtggaac 354
           |||||||||||||| | ||||||||| ||||||
Sbjct: 823 gaggagaggagggcaaggattgagcaatggaac 855
to top
>dbj|AB210107.1| Rattus norvegicus Numbl mRNA for Numb-like, complete cds
          Length = 1854

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 759 aggagccacagcaggagcagc 739
to top
>gb|AY090343.1| Arabidopsis thaliana At1g27650/T22C5_2 mRNA, complete cds
          Length = 1233

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 989  gaggagaggagggcaaggattgagcaatggaac 1021
to top
>dbj|AK147523.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
            full-length enriched library, clone:M5C1061E06
            product:numb-like, full insert sequence
          Length = 8514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 79   aggagccacagcaggagcagc 99
            |||||||||||||||||||||
Sbjct: 6726 aggagccacagcaggagcagc 6706
to top
>gb|AF409139.1| Arabidopsis thaliana U2 auxiliary factor small subunit (AUSA) mRNA,
           complete cds
          Length = 980

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 322 gaggagaggagggcgaagattgagcagtggaac 354
           |||||||||||||| | ||||||||| ||||||
Sbjct: 863 gaggagaggagggcaaggattgagcaatggaac 895
to top
>ref|NM_010950.2| Mus musculus numb-like (Numbl), mRNA
          Length = 2733

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 939 aggagccacagcaggagcagc 919
to top
>gb|BC059915.1| Mus musculus numb-like, mRNA (cDNA clone IMAGE:6826523)
          Length = 3317

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 79   aggagccacagcaggagcagc 99
            |||||||||||||||||||||
Sbjct: 1528 aggagccacagcaggagcagc 1508
to top
>emb|BX816153.1|CNS0ABWQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH31ZA11 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1323

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 993  gaggagaggagggcaaggattgagcaatggaac 1025
to top
>emb|BX815280.1|CNS0ABIT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS49ZC03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1279

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 972  gaggagaggagggcaaggattgagcaatggaac 1004
to top
>gb|AC012375.3|AC012375 Genomic sequence for Arabidopsis thaliana BAC T22C5 from chromosome I,
             complete sequence
          Length = 106753

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 322   gaggagaggagggcgaagattgagcagtggaac 354
             |||||||||||||| | ||||||||| ||||||
Sbjct: 27957 gaggagaggagggcaaggattgagcaatggaac 27989
to top
>gb|AY088540.1| Arabidopsis thaliana clone 7697 mRNA, complete sequence
          Length = 1362

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 322  gaggagaggagggcgaagattgagcagtggaac 354
            |||||||||||||| | ||||||||| ||||||
Sbjct: 998  gaggagaggagggcaaggattgagcaatggaac 1030
to top
>gb|AC005916.2|T17H3 Arabidopsis thaliana chromosome 1 BAC T17H3 sequence, complete sequence
          Length = 65839

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 322   gaggagaggagggcgaagattgagcagtggaac 354
             |||||||||||||| | ||||||||| ||||||
Sbjct: 60370 gaggagaggagggcaaggattgagcaatggaac 60402
to top
>gb|U96441.1|MMU96441 Mus musculus Numblike (m-nbl) mRNA, complete cds
          Length = 2600

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 820 aggagccacagcaggagcagc 800
to top
>emb|AJ718146.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT31-350A, cultivar Bright
           Yellow 2
          Length = 296

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 325 gagaggagggcgaagattgagcagtggaa 353
           ||||||||||| ||||||||||| |||||
Sbjct: 31  gagaggagggcaaagattgagcaatggaa 59
to top
>emb|AJ718087.1| Nicotiana tabacum cDNA-AFLP-fragment BSTT3-22-280, cultivar Bright
           Yellow 2
          Length = 217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 325 gagaggagggcgaagattgagcagtggaa 353
           ||||||||||| ||||||||||| |||||
Sbjct: 21  gagaggagggcaaagattgagcaatggaa 49
to top
>ref|NM_001033888.1| Rattus norvegicus numb-like (Numbl), mRNA
          Length = 1854

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 79  aggagccacagcaggagcagc 99
           |||||||||||||||||||||
Sbjct: 759 aggagccacagcaggagcagc 739
to top
>ref|XM_866497.1| PREDICTED: Bos taurus similar to solute carrier family 16, member 2
           (LOC614855), mRNA
          Length = 660

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cagccggagcccaagcccctaccg 119
           |||||||||||| |||||||||||
Sbjct: 349 cagccggagccccagcccctaccg 372
to top
>ref|NM_138734.1| Homo sapiens neurexin 2 (NRXN2), transcript variant beta, mRNA
          Length = 3550

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tgcgcctgccaggcagggca 385
            ||||||||||||||||||||
Sbjct: 2743 tgcgcctgccaggcagggca 2762
to top
>ref|NM_138732.1| Homo sapiens neurexin 2 (NRXN2), transcript variant alpha-2, mRNA
          Length = 6390

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tgcgcctgccaggcagggca 385
            ||||||||||||||||||||
Sbjct: 5599 tgcgcctgccaggcagggca 5618
to top
>ref|NM_015080.2| Homo sapiens neurexin 2 (NRXN2), transcript variant alpha-1, mRNA
          Length = 6616

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tgcgcctgccaggcagggca 385
            ||||||||||||||||||||
Sbjct: 5809 tgcgcctgccaggcagggca 5828
to top
>ref|XM_845026.1| PREDICTED: Canis familiaris similar to ribosomal protein S11
           (LOC608115), mRNA
          Length = 1119

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 95  gcagccggagcccaagcccctacc 118
           ||||||||||||| ||||||||||
Sbjct: 519 gcagccggagccccagcccctacc 542
to top
>gb|AC113518.9| Mus musculus chromosome 1, clone RP23-477L7, complete sequence
          Length = 194281

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    aggaggagccacagcaggag 95
             ||||||||||||||||||||
Sbjct: 96847 aggaggagccacagcaggag 96866
to top
>gb|AC116318.7| Mus musculus BAC clone RP23-80L14 from chromosome 1, complete sequence
          Length = 235490

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    aggaggagccacagcaggag 95
             ||||||||||||||||||||
Sbjct: 15032 aggaggagccacagcaggag 15013
to top
>emb|AL135901.23| Human DNA sequence from clone RP11-432M24 on chromosome 13 Contains a
             novel gene (LOC115761), the gene for emopamil binding
             related protein delta8-delta7sterol isomerase related
             protein (EBRP), the 3' end of the KPNA3 gene for
             karyopherin alpha 3 (importin alpha 4), a novel pseudogene
             and two CpG islands, complete sequence
          Length = 149433

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 372   tgccaggcagggcagcgaggagaggagg 399
             |||||||||||||||| ||| |||||||
Sbjct: 71224 tgccaggcagggcagccaggggaggagg 71251
to top
>gb|AC025177.6| Homo sapiens chromosome 5 clone CTD-2131I18, complete sequence
          Length = 112967

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 309   cagggagggcagcgaggagaggag 332
             |||||||||||||||||| |||||
Sbjct: 33284 cagggagggcagcgaggacaggag 33261
to top
>ref|NM_137678.2| Drosophila melanogaster Ipk1 CG30295-RA (Ipk1), mRNA
          Length = 2463

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   cagcaggagcagccggagcc 106
            ||||||||||||||||||||
Sbjct: 1662 cagcaggagcagccggagcc 1681
to top
>gb|AC012153.10| Homo sapiens 11q BAC RP5-1045O21 (Roswell Park Cancer Institute
           Human BAC Library) complete sequence
          Length = 120628

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 366 tgcgcctgccaggcagggca 385
           ||||||||||||||||||||
Sbjct: 487 tgcgcctgccaggcagggca 506
to top
>ref|NM_006517.2| Homo sapiens solute carrier family 16 (monocarboxylic acid
           transporters), member 2 (SLC16A2), mRNA
          Length = 4401

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cagccggagcccaagcccctaccg 119
           |||||||||||| |||||||||||
Sbjct: 542 cagccggagccccagcccctaccg 565
to top
>gb|AY061821.1| Drosophila melanogaster GH07317 full length cDNA
          Length = 2476

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 87   cagcaggagcagccggagcc 106
            ||||||||||||||||||||
Sbjct: 1662 cagcaggagcagccggagcc 1681
to top
>emb|BX323987.12| Zebrafish DNA sequence from clone DKEY-125E8, complete sequence
          Length = 164299

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49851 acagcaggagcagccggagc 49870



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49782 acagcaggagcagccggagc 49801



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49713 acagcaggagcagccggagc 49732



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49611 acagcaggagcagccggagc 49630



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49509 acagcaggagcagccggagc 49528



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49440 acagcaggagcagccggagc 49459



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 86    acagcaggagcagccggagc 105
             ||||||||||||||||||||
Sbjct: 49371 acagcaggagcagccggagc 49390
to top
>gb|AC012388.5| Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR10P16, complete sequence
          Length = 171972

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    cagcaggagcagccggagcc 106
             ||||||||||||||||||||
Sbjct: 92634 cagcaggagcagccggagcc 92653
to top
>gb|AC044790.4|AC044790 Homo sapiens chromosome 11 clone RP11-141J21 containing NRXN2 (NRXN2)
              gene, partial cds; and RST and OAT4 genes, complete cds,
              complete sequence
          Length = 170114

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 366    tgcgcctgccaggcagggca 385
              ||||||||||||||||||||
Sbjct: 111033 tgcgcctgccaggcagggca 111052
to top
>gb|AC008289.5|AC008289 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone
             BACR04E05, complete sequence
          Length = 163012

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cagcaggagcagccggagcc 106
             ||||||||||||||||||||
Sbjct: 85693 cagcaggagcagccggagcc 85674
to top
>gb|AC007888.7|AC007888 Drosophila melanogaster, chromosome 2R, region 57B6-57B13, BAC clone
              BACR10P11, complete sequence
          Length = 164035

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     cagcaggagcagccggagcc 106
              ||||||||||||||||||||
Sbjct: 158474 cagcaggagcagccggagcc 158455
to top
>gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 205283

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   tggaggcagcctggaccgtg 196
             ||||||||||||||||||||
Sbjct: 80191 tggaggcagcctggaccgtg 80210
to top
>dbj|AB177862.1| Homo sapiens mRNA for KIAA0921 splice variant 1
          Length = 5325

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tgcgcctgccaggcagggca 385
            ||||||||||||||||||||
Sbjct: 4536 tgcgcctgccaggcagggca 4555
to top
>gb|AF067845.1|AF067845 Homo sapiens clone P1-4248, complete sequence
          Length = 108932

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   cagggagggcagcgaggaga 328
             ||||||||||||||||||||
Sbjct: 78486 cagggagggcagcgaggaga 78467
to top
>gb|AE003452.5| Drosophila melanogaster chromosome 2R, section 60 of 73 of the complete
             sequence
          Length = 303438

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    cagcaggagcagccggagcc 106
             ||||||||||||||||||||
Sbjct: 92794 cagcaggagcagccggagcc 92813
to top
>dbj|AB085789.1| Homo sapiens xpct mRNA for X-linked PEST-containing transporter,
           complete cds
          Length = 4085

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cagccggagcccaagcccctaccg 119
           |||||||||||| |||||||||||
Sbjct: 241 cagccggagccccagcccctaccg 264
to top
>dbj|AP001092.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-727K3, complete
             sequence
          Length = 160739

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   tgcgcctgccaggcagggca 385
             ||||||||||||||||||||
Sbjct: 49895 tgcgcctgccaggcagggca 49876
to top
>dbj|AP006288.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-128H22, complete
             sequence
          Length = 169259

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   tgcgcctgccaggcagggca 385
             ||||||||||||||||||||
Sbjct: 89050 tgcgcctgccaggcagggca 89031
to top
>gb|AC004433.1|AC004433 Drosophila melanogaster, chromosome 2R, region 57B1-57B6, P1 clone
             DS03659, complete sequence
          Length = 85862

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    cagcaggagcagccggagcc 106
             ||||||||||||||||||||
Sbjct: 28864 cagcaggagcagccggagcc 28845
to top
>gb|AC125369.4| Mus musculus BAC clone RP24-380D10 from 8, complete sequence
          Length = 169338

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 558    actcagatgcctcatgtaga 577
              ||||||||||||||||||||
Sbjct: 117751 actcagatgcctcatgtaga 117770
to top
>gb|AC004073.1|AC004073 Human Chromosome X, complete sequence
          Length = 79612

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 96    cagccggagcccaagcccctaccg 119
             |||||||||||| |||||||||||
Sbjct: 24557 cagccggagccccagcccctaccg 24580
to top
>gb|U05316.1|HSXPCT1 Human X-linked PEST-containing transporter (XPCT) gene, promoter and
            exon 1
          Length = 2717

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 96   cagccggagcccaagcccctaccg 119
            |||||||||||| |||||||||||
Sbjct: 2120 cagccggagccccagcccctaccg 2143
to top
>gb|U05315.1|HSU05315 Human X-linked PEST-containing transporter (XPCT) mRNA, partial cds
          Length = 4160

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 96  cagccggagcccaagcccctaccg 119
           |||||||||||| |||||||||||
Sbjct: 331 cagccggagccccagcccctaccg 354
to top
>gb|L81684.1|HSL81684 Homo sapiens (subclone 1_e11 from P1 H54) DNA sequence, complete
            sequence
          Length = 3380

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 309  cagggagggcagcgaggagaggag 332
            |||||||||||||||||| |||||
Sbjct: 1231 cagggagggcagcgaggacaggag 1254
to top
>gb|AD000685.1|CH19R25187 Homo sapiens DNA from chromosome 19p13.1 cosmids f5004 R25187
            containing the LTB4H2 and LTB4H3 genes, genomic sequence
          Length = 52284

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 74   ccaggaggagccacagcagg 93
            ||||||||||||||||||||
Sbjct: 2675 ccaggaggagccacagcagg 2656
to top
>gb|L13122.1|HUMTANDH Human tandem repeat polymorphism
          Length = 353

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 74  ccaggaggagccacagcagg 93
           ||||||||||||||||||||
Sbjct: 132 ccaggaggagccacagcagg 151
to top
>dbj|AB035266.1| Homo sapiens mRNA for neurexin II, complete cds
          Length = 6291

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  tgcgcctgccaggcagggca 385
            ||||||||||||||||||||
Sbjct: 5484 tgcgcctgccaggcagggca 5503


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,269,557
Number of Sequences: 3902068
Number of extensions: 4269557
Number of successful extensions: 79953
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79689
Number of HSP's gapped (non-prelim): 253
length of query: 583
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 560
effective length of database: 17,143,297,704
effective search space: 9600246714240
effective search space used: 9600246714240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top