ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9a15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1U888_DEIRA (Q9RVY3) Protein DR0888 36 0.065
2NEST_HUMAN (P48681) Nestin 33 0.55
3CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin) 33 0.72
4RECN_ECOLI (P05824) DNA repair protein recN (Recombination prote... 33 0.72
5CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6 32 0.94
6MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase ... 32 1.6
7EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7 31 2.1
8HTPG_HELPJ (Q9ZMM2) Chaperone protein htpG (Heat shock protein h... 31 2.1
9SCRL1_ORYSA (Q84TX2) SCAR-like protein 1 31 2.7
10SYH_PYRAB (Q9UY31) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histi... 31 2.7
11SYL_HAEIN (P43827) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-... 31 2.7
12PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.... 30 3.6
13VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf) 30 3.6
14BCAS1_HUMAN (O75363) Breast carcinoma amplified sequence 1 (Nove... 30 3.6
15BNIPL_HUMAN (Q7Z465) Bcl-2/adenovirus E1B 19 kDa-interacting pro... 30 4.6
16SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-dete... 30 4.6
17FUTSC_DROME (Q9W596) Microtubule-associated protein futsch 30 4.6
18GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outg... 30 4.6
19RIMB2_MOUSE (Q80U40) RIM-binding protein 2 (RIM-BP2) 30 6.1
20GAL1_FUSNN (Q8RHD0) Galactokinase (EC 2.7.1.6) (Galactose kinase) 30 6.1
21DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 30 6.1
22MYLK2_RAT (P20689) Myosin light chain kinase 2, skeletal/cardiac... 30 6.1
23SYFB_BACLD (Q65GD3) Phenylalanyl-tRNA synthetase beta chain (EC ... 29 7.9
24HXC6B_BRARE (Q9PWM5) Homeobox protein Hox-C6b 29 7.9
25SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2... 29 7.9
26UBL7_MOUSE (Q91W67) Ubiquitin-like protein 7 (Ubiquitin-like pro... 29 7.9
27UBL7_HUMAN (Q96S82) Ubiquitin-like protein 7 (Ubiquitin-like pro... 29 7.9

>U888_DEIRA (Q9RVY3) Protein DR0888|
          Length = 253

 Score = 36.2 bits (82), Expect = 0.065
 Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 16/149 (10%)
 Frame = +2

Query: 158 ETMGHTGESAPGPGMMDEFVPEDAGREEPQGDSH---DVASQLVGRVDSGSTKADSVESG 328
           +T     +S   P  M + V + AG  E +  S     V S + G  +  +   D ++SG
Sbjct: 89  QTSPSVQDSPSTPVQMPDIVQQGAGDVEIEDTSRIAKAVLSAIRGNGELANNPIDVLQSG 148

Query: 329 EKMSHARG-----QESNLQHSLSCNARVYSGIDLSKDEVTQTGKMLTKDEYDPGNDLGAT 493
             +   RG      E  L   L+   +  SG+D+S   V Q  K L KD+ +   D   T
Sbjct: 149 NSVI-LRGAVDSDHELRLAEQLARGVQGVSGVDISGLRVAQGAKELAKDKDEDTGDTVYT 207

Query: 494 NGENDSETGLP--------EFDPIKHHNN 556
               DS + +         E+  I H+NN
Sbjct: 208 VKPGDSLSKIAEHYYGDQMEYKKIAHYNN 236



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>NEST_HUMAN (P48681) Nestin|
          Length = 1618

 Score = 33.1 bits (74), Expect = 0.55
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 20/93 (21%)
 Frame = +2

Query: 110  KTESVVGDVEPVPELTETMGHTGESAPGPGMM-----DEFVP--------------EDAG 232
            + E+  G  E  P   ET+GHTG  AP P  +     +E VP              EDA 
Sbjct: 1176 EAEAPRGAEEAFP--AETLGHTGSDAPSPWPLGSEEAEEDVPPVLVSPSPTYTPILEDAP 1233

Query: 233  REEPQGDSHDVASQLV-GRVDSGSTKADSVESG 328
              +PQ +    AS  V GR ++G  +++  E G
Sbjct: 1234 GLQPQAEGSQEASWGVQGRAEAGKVESEQEELG 1266



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>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)|
          Length = 637

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 38/173 (21%), Positives = 63/173 (36%), Gaps = 9/173 (5%)
 Frame = +2

Query: 62  GASHEAE-----IHGVEISGHKTESVVGDVEPVPELTETMGHTGES-APGPGMMDEFVPE 223
           G S +AE      HG    G   +   G  +P  E  E      E  +PG  + D    E
Sbjct: 239 GGSMDAEGPAGGAHGA--GGEPQDLGAGSPQPRSEAVEVAAAENEGHSPGESVEDAAAEE 296

Query: 224 DAGREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMS---HARGQESNLQHSLSCNAR 394
            AG  EP+G S D A +     D G  + ++ +  E+       + +E       S +  
Sbjct: 297 AAGTREPEG-SEDAAGE---DGDQGRPQEETEQQAERQEPGPETQSEEEERPPDRSPDGE 352

Query: 395 VYSGIDLSKDEVTQTGKMLTKDEYDPGNDLGATNGENDSETGLPEFDPIKHHN 553
             +    ++ E   +  +  ++    G   G  NG  +      E DP + H+
Sbjct: 353 AAASTRAAQPEAELSNHLAAEEGGQRGE--GPANGRGEDGEASEEGDPGQEHD 403



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>RECN_ECOLI (P05824) DNA repair protein recN (Recombination protein N)|
          Length = 553

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = -3

Query: 251 HPEALLDQHPQGQTHPSFQVQELTHQYDPWFQ*ARELVPHLQQRSQFYVQKSRLREFRLH 72
           H + LLD    G  + +  +QE+T +Y  W Q  R+L  H QQ SQ    ++ L +++L 
Sbjct: 141 HQKFLLD----GYANETSLLQEMTARYQLWHQSCRDLAHH-QQLSQERAARAELLQYQLK 195

Query: 71  D*HPF 57
           + + F
Sbjct: 196 ELNEF 200



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>CLIC6_HUMAN (Q96NY7) Chloride intracellular channel 6|
          Length = 704

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 1/117 (0%)
 Frame = +2

Query: 65  ASHEAEIHGVEISGHKTESVVGDVE-PVPELTETMGHTGESAPGPGMMDEFVPEDAGREE 241
           A    E+     SG   +SV  D E P+ +  E  G  G+S    G + + V  DA  E 
Sbjct: 141 AEQRPEVPEGSASGEAGDSV--DAEGPLGDNIEAEGPAGDSVEAEGRVGDSV--DA--EG 194

Query: 242 PQGDSHDVASQLVGRVDSGSTKADSVESGEKMSHARGQESNLQHSLSCNARVYSGID 412
           P GDS D    L   + +     DSV++  ++  +   E     S+    RV   ++
Sbjct: 195 PAGDSVDAEGPLGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVE 251



 Score = 32.0 bits (71), Expect = 1.2
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
 Frame = +2

Query: 62  GASHEAEIH---GVEISGHKTESVVGDVE-PVPELTETMGHTGESAPGPGMMDEFVPEDA 229
           G S EAE      V+  G   +SV  D E P+ +  +  G  G+S    G + + V  DA
Sbjct: 177 GDSVEAEGRVGDSVDAEGPAGDSV--DAEGPLGDNIQAEGPAGDSVDAEGRVGDSV--DA 232

Query: 230 GREEPQGDSHDVASQLVGRVDSGSTKADSVESG 328
             E P GDS D   ++   V++G    D VE+G
Sbjct: 233 --EGPAGDSVDAEGRVGDSVEAGDPAGDGVEAG 263



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>MARK4_HUMAN (Q96L34) MAP/microtubule affinity-regulating kinase 4 (EC 2.7.11.1)|
           (MAP/microtubule affinity-regulating kinase-like 1)
          Length = 752

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 30/112 (26%), Positives = 45/112 (40%), Gaps = 8/112 (7%)
 Frame = +2

Query: 230 GREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMSHARGQESN-------LQHSLSCN 388
           GR+  +G         + RV + S   +   S +  SH++GQ S+        +HS  C 
Sbjct: 368 GRKTEEGGDRGAPGLALARVRAPSDTTNGTSSSKGTSHSKGQRSSSSTYHRQRRHSDFCG 427

Query: 389 ARVYSGIDL-SKDEVTQTGKMLTKDEYDPGNDLGATNGENDSETGLPEFDPI 541
               S   L  K   T TG+   K+E  PG     +   + S  GLP   P+
Sbjct: 428 P---SPAPLHPKRSPTSTGEAELKEERLPGRKASCSTAGSGSR-GLPPSSPM 475



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>EAF7_CANAL (Q5A6Q7) Chromatin modification-related protein EAF7|
          Length = 445

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 24/126 (19%), Positives = 54/126 (42%), Gaps = 3/126 (2%)
 Frame = +2

Query: 149 ELTETMGHTGESAPGPGMMDEFVPEDAGRE--EPQGDSHDVASQLVGRVDSGSTKADSVE 322
           E++ T  HT + +P PG   + + E    +  + +    D   + + ++   +T     +
Sbjct: 188 EVSSTSDHTDDQSPTPGSTKKGLDEQTNDDMSDIEDVDKDKGDETIAKIKKENTSEQEED 247

Query: 323 SGEKMSHARGQESNLQ-HSLSCNARVYSGIDLSKDEVTQTGKMLTKDEYDPGNDLGATNG 499
             +K +    +E   +   +S + R     D S+DE  +  +   +D+ +   D   T+ 
Sbjct: 248 KNKKQTEEEAEEEEEEGDHVSGDERESKNKDTSEDEDGEDNEDQDEDDVEVIED-SHTDK 306

Query: 500 ENDSET 517
           EN+S +
Sbjct: 307 ENESSS 312



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>HTPG_HELPJ (Q9ZMM2) Chaperone protein htpG (Heat shock protein htpG) (High|
           temperature protein G)
          Length = 621

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 80  EIHGVEISGHKTESV--VGDVEPVPELTETMGHTGESAPGPGMMDEFVPEDA 229
           EI GVE+SGH T +V  +GD EP   +   M   G+S P      E  P  A
Sbjct: 520 EIKGVELSGHLTSAVALIGD-EPNAMMANWMRQMGQSVPESKKTLELNPNHA 570



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>SCRL1_ORYSA (Q84TX2) SCAR-like protein 1|
          Length = 2097

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 27/109 (24%), Positives = 43/109 (39%), Gaps = 7/109 (6%)
 Frame = +2

Query: 194 PGMMDEFVPEDAGREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMSHARGQESNLQH 373
           PG   E    +  R+E + + H   S+L   +DS     DS   GE             H
Sbjct: 426 PGAKMELDELNFHRDEGENERHTEFSELGHVIDSSPWLNDSYNGGEP-----------NH 474

Query: 374 SLSCNARVYSGIDLSKDE-------VTQTGKMLTKDEYDPGNDLGATNG 499
           ++S N   +SG+D + DE       + +     +   +   ND+  TNG
Sbjct: 475 AISSNTN-FSGVDCTNDEEPSNDVDLMEMDVSSSSSVFSDDNDVFRTNG 522



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>SYH_PYRAB (Q9UY31) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 431

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
 Frame = +2

Query: 92  VEISGHKTESVVG---DVEPVPELTETMGHTGESAPGPGMMDEFVPEDAGREEPQGDSHD 262
           +E+ G K     G    +E +  + E  G   E   GP   D FV        P GDS D
Sbjct: 301 IEVFGGKPTPATGFAIGIERLIPILEWKGLLPELKAGP---DVFVI-------PVGDSRD 350

Query: 263 VASQLVGRVDSGSTKADSVESGEKMSHA 346
           VA+ +V R+     ++D   SG K+  A
Sbjct: 351 VATAIVTRLRKAGIRSDIELSGRKLRKA 378



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>SYL_HAEIN (P43827) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
           (LeuRS)
          Length = 861

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +2

Query: 407 IDLSKDEVTQTGKMLTKDEYDPGNDLGATNGEND 508
           IDL+K    + GK++  DE+D  N  GA NG  D
Sbjct: 368 IDLTKQAFVEHGKLVNSDEFDGKNFDGAFNGIAD 401



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>PP2CG_HUMAN (O15355) Protein phosphatase 2C isoform gamma (EC 3.1.3.16)|
           (PP2C-gamma) (Protein phosphatase magnesium-dependent 1
           gamma) (Protein phosphatase 1C)
          Length = 546

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 17/62 (27%), Positives = 28/62 (45%)
 Frame = +2

Query: 146 PELTETMGHTGESAPGPGMMDEFVPEDAGREEPQGDSHDVASQLVGRVDSGSTKADSVES 325
           P  +++ G TGE     G+  E  PED+ RE P  ++   A    G   +     ++ + 
Sbjct: 168 PPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQV 227

Query: 326 GE 331
           GE
Sbjct: 228 GE 229



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>VLTF_BPT5 (P13390) L-shaped tail fiber protein (Protein ltf)|
          Length = 1396

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 21/74 (28%), Positives = 33/74 (44%)
 Frame = -3

Query: 476  FLGHTRPSSAFYQSGSLHL*INQCQNKLLHCKKGNVAGYSPGLWHGSSSLHSRPNQL*LN 297
            ++G T+P S FY   S H        +     +G+VA  S G W  +S+    P Q+ L 
Sbjct: 1164 YIGATQPGSTFYIGASGH------DGEKFDSMRGSVAIKSAGGWGPTST----PTQVVLE 1213

Query: 296  HCPLDPLTEMPHRG 255
             C    ++ +P  G
Sbjct: 1214 TCESGSISRLPRWG 1227



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>BCAS1_HUMAN (O75363) Breast carcinoma amplified sequence 1 (Novel amplified in|
           breast cancer 1) (Amplified and overexpressed in breast
           cancer)
          Length = 584

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 9/99 (9%)
 Frame = +2

Query: 158 ETMGHTGESAPGP---GMMDEFVPEDAGREEPQGDSHDVASQL-----VGRVDSGSTKAD 313
           ET G  GE+   P      D+F   D G+E+  GDS   A +      V  V   S ++D
Sbjct: 176 ETGGAGGEAPSKPKDSSFFDKFFKLDKGQEKVPGDSQQEAKRAEHQDKVDEVPGLSGQSD 235

Query: 314 SVESGEKMSHARGQESNLQHSLSCNA-RVYSGIDLSKDE 427
            V +G+ +   + +E     +  C+      G++ +KD+
Sbjct: 236 DVPAGKDIVDGKEKEGQELGTADCSVPGDPEGLETAKDD 274



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>BNIPL_HUMAN (Q7Z465) Bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like|
           protein
          Length = 357

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
 Frame = +2

Query: 92  VEISGHKTESVVGDVEPVPELTETMGHTGESAPGPGMMDE----FVPEDAGR----EEPQ 247
           ++ +G KT+  V ++   PEL   + H GE        DE     +PE+AG     E+P+
Sbjct: 4   IQEAGKKTDVGVREIAEAPELGAALRH-GELELKEEWQDEEFPRLLPEEAGTSEDPEDPK 62

Query: 248 GDSHDVA 268
           GDS   A
Sbjct: 63  GDSQAAA 69



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>SRY_MUSSI (Q62565) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 311

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/102 (24%), Positives = 42/102 (41%)
 Frame = -3

Query: 347 WHGSSSLHSRPNQL*LNHCPLDPLTEMPHRGYHPEALLDQHPQGQTHPSFQVQELTHQYD 168
           W  ++ L+S+ NQ      P+D  T  P +    +   + H Q Q       Q+   Q+ 
Sbjct: 117 WSRAAHLYSK-NQQSFYLQPVDIPTGHPQQ-QQQQQFHNHHQQKQQFHDHHQQQQQQQFH 174

Query: 167 PWFQ*ARELVPHLQQRSQFYVQKSRLREFRLHD*HPFQHCLH 42
              Q  ++   H QQ+ QF+      ++ + HD    Q  LH
Sbjct: 175 DHHQQKQQFHDHQQQQQQFHDHHHHQQQQQFHDHQQQQQQLH 216



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>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch|
          Length = 5412

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 25/92 (27%), Positives = 41/92 (44%)
 Frame = +2

Query: 74   EAEIHGVEISGHKTESVVGDVEPVPELTETMGHTGESAPGPGMMDEFVPEDAGREEPQGD 253
            E+     E S  + ESV+   EPVP  +++   + +++  PG M E V  +  + E Q  
Sbjct: 2955 ESSKDDAEKSESRPESVIASGEPVPRESKSPLDSKDTS-RPGSMVESVTAEDEKSEQQSR 3013

Query: 254  SHDVASQLVGRVDSGSTKADSVESGEKMSHAR 349
               VA          S KAD+ + G+    +R
Sbjct: 3014 RESVAE---------SVKADTKKDGKSQEASR 3036



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>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)|
          Length = 1008

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 20/76 (26%), Positives = 34/76 (44%)
 Frame = +2

Query: 65  ASHEAEIHGVEISGHKTESVVGDVEPVPELTETMGHTGESAPGPGMMDEFVPEDAGREEP 244
           A   AE   + +SG +     G  +PVP  +     TG++   PG++ + +P  +G+  P
Sbjct: 274 APTSAEKVDLVLSGKRDPGPSGKADPVPLESMDSASTGKTE--PGLLGKLIPGSSGKNGP 331

Query: 245 QGDSHDVASQLVGRVD 292
                     L GR+D
Sbjct: 332 VSSGTGAPGSL-GRLD 346



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>RIMB2_MOUSE (Q80U40) RIM-binding protein 2 (RIM-BP2)|
          Length = 1072

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +2

Query: 200  MMDEFVPEDAGREEPQGDSHDVASQLVGRVDSGSTKADSVES-GEKMSHARGQESNLQHS 376
            +  E   ED GR  P G SH+    L      G  +AD +E    + SH+ G     + +
Sbjct: 780  LYSEMQLEDGGRRRPSGTSHNALKILGNSTLMG--RADRMEHVSRRYSHSGGGSHRHRPA 837

Query: 377  LSCNARVYSGID-LSKDEVTQTGKMLTKDEYDPG 475
            ++ +   Y+G D LS D          + E DPG
Sbjct: 838  MAPSIDEYTGRDHLSPD-------FYDESETDPG 864



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>GAL1_FUSNN (Q8RHD0) Galactokinase (EC 2.7.1.6) (Galactose kinase)|
          Length = 389

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
 Frame = +2

Query: 314 SVESGEKMSHARGQESNLQ---HSLSCNARVYSGID-LSKDEVTQTGKMLTKDEYDPGND 481
           +V   EK+ H    E  L+   H+++ N R    ++ L KD++ + GK++ K      +D
Sbjct: 252 TVTEFEKVKHYITDEEQLKRATHAVTENERAKIAVEFLKKDDIAEFGKLMNKSHTSLRDD 311

Query: 482 LGATNGENDS 511
              T  E DS
Sbjct: 312 YEVTGLELDS 321



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>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix|
           protein 3) (DMP-3) [Contains: Dentin phosphoprotein
           (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
 Frame = +2

Query: 68  SHEAEIHGVEISGHKT---ESVVGDVEPVPELTETMGH------TGESAPGPGMMDEFVP 220
           +HEA IHG  ++ H+T      +G      E+T ++G       T  S  G G+ ++   
Sbjct: 193 NHEAGIHGSGVATHETTPQREGLGSENQGTEVTPSIGEDAGLDDTDGSPSGNGVEED--- 249

Query: 221 EDAGREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMSHARGQES 361
           ED G  + +G     A    GR     TK    +S    +  RGQ S
Sbjct: 250 EDTGSGDGEG-----AEAGDGRESHDGTKGQGGQSHGGNTDHRGQSS 291



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>MYLK2_RAT (P20689) Myosin light chain kinase 2, skeletal/cardiac muscle (EC|
           2.7.11.18) (MLCK2)
          Length = 609

 Score = 29.6 bits (65), Expect = 6.1
 Identities = 36/157 (22%), Positives = 58/157 (36%), Gaps = 42/157 (26%)
 Frame = +2

Query: 185 APGPGMMDEFVPEDAGREEPQGDSHD--------------------VASQLVGRVDSGST 304
           APGP    +  P  A  + P G+                        A   + ++D+   
Sbjct: 73  APGPEKKGDSAPASASNQGPSGEGDGGGGPAEGGTGPPAVLPQPTATADASIQKLDATQA 132

Query: 305 KADSVESGEKMSHARGQESN---------LQHSLSCNARV-YSGIDLSKDEVTQTGKML- 451
            + + ESGE  +  +  E             HS SC A +  S   L+   +++T +++ 
Sbjct: 133 PSGNQESGEAKAGKKAAECREAGRRGSPAFLHSPSCPAIISCSEKTLAMKPLSETTELIF 192

Query: 452 -----TKDEYDPG--NDLGATN----GENDSETGLPE 529
                T D  DPG   D G TN    G+ ++E G  E
Sbjct: 193 AGVSETPDPQDPGPAKDEGGTNTLADGKEEAEAGQAE 229



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>SYFB_BACLD (Q65GD3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 804

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
 Frame = -3

Query: 497 HSLLQD------HFLGHTRPSSAFYQSGSLHL*INQCQNKLLHCKKGNVAGYSPGLWH 342
           HSLL +      + L     S+AFY+ GS+ L   + +      +K +VAG   GLWH
Sbjct: 555 HSLLPNLLDSVAYNLARQADSAAFYEIGSVFL---KAEEHTKPVEKEHVAGAVTGLWH 609



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>HXC6B_BRARE (Q9PWM5) Homeobox protein Hox-C6b|
          Length = 227

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/39 (43%), Positives = 23/39 (58%)
 Frame = +2

Query: 353 QESNLQHSLSCNARVYSGIDLSKDEVTQTGKMLTKDEYD 469
           +ESNL   L+ N  V +G D  K+E   TG+   KDE+D
Sbjct: 192 KESNLTSILNDNGSVGAGQDTDKEE---TGETAEKDEHD 227



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>SRBP2_CRIGR (Q60429) Sterol regulatory element-binding protein 2 (SREBP-2)|
           (Sterol regulatory element-binding transcription factor
           2)
          Length = 1139

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 17/64 (26%), Positives = 29/64 (45%)
 Frame = +2

Query: 353 QESNLQHSLSCNARVYSGIDLSKDEVTQTGKMLTKDEYDPGNDLGATNGENDSETGLPEF 532
           Q++ L   +   + V S +DL  ++  Q   +++    D G+  G +    DSE G P  
Sbjct: 397 QKNKLLKGIDLGSLVDSDVDLKIEDFNQNVLLMSPPASDSGSQAGFSPYSIDSEPGSPLL 456

Query: 533 DPIK 544
           D  K
Sbjct: 457 DDAK 460



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>UBL7_MOUSE (Q91W67) Ubiquitin-like protein 7 (Ubiquitin-like protein SB132)|
          Length = 380

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +2

Query: 161 TMGHTGESAPGPGMMDEFVPEDAGREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMS 340
           ++G++G + P P    E     A    P+  SH       G     S  +  V+SG  ++
Sbjct: 255 SLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPIT 314

Query: 341 HARGQESNLQHSLSCNAR 394
           +    ++ LQH+L  + +
Sbjct: 315 NDLFSQA-LQHALQASGQ 331



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>UBL7_HUMAN (Q96S82) Ubiquitin-like protein 7 (Ubiquitin-like protein SB132)|
           (Bone marrow stromal cell ubiquitin-like protein)
           (BMSC-UbP)
          Length = 380

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 18/78 (23%), Positives = 34/78 (43%)
 Frame = +2

Query: 161 TMGHTGESAPGPGMMDEFVPEDAGREEPQGDSHDVASQLVGRVDSGSTKADSVESGEKMS 340
           ++G++G + P P    E     A    P+  SH       G     S  +  V+SG  ++
Sbjct: 255 SLGYSGAAGPRPITQSELATALALASTPESSSHTPTPGTQGHSSGTSPMSSGVQSGTPIT 314

Query: 341 HARGQESNLQHSLSCNAR 394
           +    ++ LQH+L  + +
Sbjct: 315 NDLFSQA-LQHALQASGQ 331


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,423,999
Number of Sequences: 219361
Number of extensions: 1685754
Number of successful extensions: 5484
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5471
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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