ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bags9a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete sequence Length = 190055 Score = 198 bits (100), Expect = 2e-47 Identities = 282/340 (82%), Gaps = 2/340 (0%) Strand = Plus / Minus Query: 110 tcgtggcaaggcatcaatcaccaccacccggcctcgttcgaaacgctcgccatggatcca 169 |||||||| ||| |||| |||||||||||||| ||||||| ||| |||||||||| || Sbjct: 46882 tcgtggcacggcttcaaccaccaccacccggcgacgttcgacacgatcgccatggaaccc 46823 Query: 170 gggctgaagcaggctgtcctggacgacctcgaccggttcctgaagaggaaagagtactac 229 | || ||| || | || | |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 46822 gacctcaagaagtccatcgtcgacgacctcgaccgcttcctgaagcggaaggagtactac 46763 Query: 230 cagcgaatcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggc 289 | || ||||| ||||| ||||||||||| ||||| ||| ||||||| || ||||||||| Sbjct: 46762 cgccgcatcggcaaggcgtggaaacgcgggtacctcctccacggcccgcccggcaccggc 46703 Query: 290 aagtccagcctggtcgctgccatggccaactacctacgtttcaatctctacgacctcgat 349 ||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 46702 aagtccagcctcgtcgccgccatggccaactacctccgcttcaacctctacgacctcgac 46643 Query: 350 ctct-cgagtgtgcacgacaactcatcactgcagaggcttctcatcgacatgtccaacaa 408 |||| |||| |||| || |||| | | |||||| | || |||||| |||| ||||||| Sbjct: 46642 ctctccgag-gtgcgcgtcaacgccgcgctgcagcgcctgctcatcagcatgcccaacaa 46584 Query: 409 gtccatccttgtcatcgaagatattgactgcagtttcgac 448 |||||||| |||||||| || || |||||| | |||||| Sbjct: 46583 atccatcctcgtcatcgaggacatcgactgctgcttcgac 46544 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| || Sbjct: 46396 ctgtccgggctgctcaacttcatcgacgggctgtggtccacgagcggcgaggagcgcgtc 46337 Query: 599 atgatcttcac 609 || ||||||| Sbjct: 46336 atcgtcttcac 46326
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 198 bits (100), Expect = 2e-47 Identities = 282/340 (82%), Gaps = 2/340 (0%) Strand = Plus / Minus Query: 110 tcgtggcaaggcatcaatcaccaccacccggcctcgttcgaaacgctcgccatggatcca 169 |||||||| ||| |||| |||||||||||||| ||||||| ||| |||||||||| || Sbjct: 21353971 tcgtggcacggcttcaaccaccaccacccggcgacgttcgacacgatcgccatggaaccc 21353912 Query: 170 gggctgaagcaggctgtcctggacgacctcgaccggttcctgaagaggaaagagtactac 229 | || ||| || | || | |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 21353911 gacctcaagaagtccatcgtcgacgacctcgaccgcttcctgaagcggaaggagtactac 21353852 Query: 230 cagcgaatcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggc 289 | || ||||| ||||| ||||||||||| ||||| ||| ||||||| || ||||||||| Sbjct: 21353851 cgccgcatcggcaaggcgtggaaacgcgggtacctcctccacggcccgcccggcaccggc 21353792 Query: 290 aagtccagcctggtcgctgccatggccaactacctacgtttcaatctctacgacctcgat 349 ||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 21353791 aagtccagcctcgtcgccgccatggccaactacctccgcttcaacctctacgacctcgac 21353732 Query: 350 ctct-cgagtgtgcacgacaactcatcactgcagaggcttctcatcgacatgtccaacaa 408 |||| |||| |||| || |||| | | |||||| | || |||||| |||| ||||||| Sbjct: 21353731 ctctccgag-gtgcgcgtcaacgccgcgctgcagcgcctgctcatcagcatgcccaacaa 21353673 Query: 409 gtccatccttgtcatcgaagatattgactgcagtttcgac 448 |||||||| |||||||| || || |||||| | |||||| Sbjct: 21353672 atccatcctcgtcatcgaggacatcgactgctgcttcgac 21353633 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| || Sbjct: 21353485 ctgtccgggctgctcaacttcatcgacgggctgtggtccacgagcggcgaggagcgcgtc 21353426 Query: 599 atgatcttcac 609 || ||||||| Sbjct: 21353425 atcgtcttcac 21353415 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 33179248 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 33179307 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 33179308 ccatgatcgccgccatggccaactacct 33179335 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||| ||||||||||||||| |||||||| Sbjct: 33185210 ctgtccgggctgctaaacttcatcgacgggctgtggtcg 33185248 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 33629767 ccctggcaccggcaagtccagcctcgtcg 33629739 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 tggcaccggcaagtccagcctggtcgc 306 ||||||||||||||||||||| ||||| Sbjct: 33634018 tggcaccggcaagtccagcctcgtcgc 33633992 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtc 294 ||||||| ||||||||||| | |||||||||||||| Sbjct: 792301 gctacctcctctacggcccgctgggcaccggcaagtc 792265 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ttggaggacgaggacgacgg 501 |||||||||||||||||||| Sbjct: 15156312 ttggaggacgaggacgacgg 15156293
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 198 bits (100), Expect = 2e-47 Identities = 282/340 (82%), Gaps = 2/340 (0%) Strand = Plus / Minus Query: 110 tcgtggcaaggcatcaatcaccaccacccggcctcgttcgaaacgctcgccatggatcca 169 |||||||| ||| |||| |||||||||||||| ||||||| ||| |||||||||| || Sbjct: 21347000 tcgtggcacggcttcaaccaccaccacccggcgacgttcgacacgatcgccatggaaccc 21346941 Query: 170 gggctgaagcaggctgtcctggacgacctcgaccggttcctgaagaggaaagagtactac 229 | || ||| || | || | |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 21346940 gacctcaagaagtccatcgtcgacgacctcgaccgcttcctgaagcggaaggagtactac 21346881 Query: 230 cagcgaatcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggc 289 | || ||||| ||||| ||||||||||| ||||| ||| ||||||| || ||||||||| Sbjct: 21346880 cgccgcatcggcaaggcgtggaaacgcgggtacctcctccacggcccgcccggcaccggc 21346821 Query: 290 aagtccagcctggtcgctgccatggccaactacctacgtttcaatctctacgacctcgat 349 ||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 21346820 aagtccagcctcgtcgccgccatggccaactacctccgcttcaacctctacgacctcgac 21346761 Query: 350 ctct-cgagtgtgcacgacaactcatcactgcagaggcttctcatcgacatgtccaacaa 408 |||| |||| |||| || |||| | | |||||| | || |||||| |||| ||||||| Sbjct: 21346760 ctctccgag-gtgcgcgtcaacgccgcgctgcagcgcctgctcatcagcatgcccaacaa 21346702 Query: 409 gtccatccttgtcatcgaagatattgactgcagtttcgac 448 |||||||| |||||||| || || |||||| | |||||| Sbjct: 21346701 atccatcctcgtcatcgaggacatcgactgctgcttcgac 21346662 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| || Sbjct: 21346514 ctgtccgggctgctcaacttcatcgacgggctgtggtccacgagcggcgaggagcgcgtc 21346455 Query: 599 atgatcttcac 609 || ||||||| Sbjct: 21346454 atcgtcttcac 21346444 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 33269758 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 33269817 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 33269818 ccatgatcgccgccatggccaactacct 33269845 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||| ||||||||||||||| |||||||| Sbjct: 33275720 ctgtccgggctgctaaacttcatcgacgggctgtggtcg 33275758 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 33720239 ccctggcaccggcaagtccagcctcgtcg 33720211 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 tggcaccggcaagtccagcctggtcgc 306 ||||||||||||||||||||| ||||| Sbjct: 33724490 tggcaccggcaagtccagcctcgtcgc 33724464 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtc 294 ||||||| ||||||||||| | |||||||||||||| Sbjct: 792299 gctacctcctctacggcccgctgggcaccggcaagtc 792263 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 482 ttggaggacgaggacgacgg 501 |||||||||||||||||||| Sbjct: 15150846 ttggaggacgaggacgacgg 15150827
>dbj|AK101987.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079B04, full insert sequence Length = 1408 Score = 198 bits (100), Expect = 2e-47 Identities = 282/340 (82%), Gaps = 2/340 (0%) Strand = Plus / Plus Query: 110 tcgtggcaaggcatcaatcaccaccacccggcctcgttcgaaacgctcgccatggatcca 169 |||||||| ||| |||| |||||||||||||| ||||||| ||| |||||||||| || Sbjct: 121 tcgtggcacggcttcaaccaccaccacccggcgacgttcgacacgatcgccatggaaccc 180 Query: 170 gggctgaagcaggctgtcctggacgacctcgaccggttcctgaagaggaaagagtactac 229 | || ||| || | || | |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 181 gacctcaagaagtccatcgtcgacgacctcgaccgcttcctgaagcggaaggagtactac 240 Query: 230 cagcgaatcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggc 289 | || ||||| ||||| ||||||||||| ||||| ||| ||||||| || ||||||||| Sbjct: 241 cgccgcatcggcaaggcgtggaaacgcgggtacctcctccacggcccgcccggcaccggc 300 Query: 290 aagtccagcctggtcgctgccatggccaactacctacgtttcaatctctacgacctcgat 349 ||||||||||| ||||| ||||||||||||||||| || ||||| |||||||||||||| Sbjct: 301 aagtccagcctcgtcgccgccatggccaactacctccgcttcaacctctacgacctcgac 360 Query: 350 ctct-cgagtgtgcacgacaactcatcactgcagaggcttctcatcgacatgtccaacaa 408 |||| |||| |||| || |||| | | |||||| | || |||||| |||| ||||||| Sbjct: 361 ctctccgag-gtgcgcgtcaacgccgcgctgcagcgcctgctcatcagcatgcccaacaa 419 Query: 409 gtccatccttgtcatcgaagatattgactgcagtttcgac 448 |||||||| |||||||| || || |||||| | |||||| Sbjct: 420 atccatcctcgtcatcgaggacatcgactgctgcttcgac 459 Score = 85.7 bits (43), Expect = 2e-13 Identities = 64/71 (90%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||||||||||| ||||||| || ||||||||||||||| || Sbjct: 607 ctgtccgggctgctcaacttcatcgacgggctgtggtccacgagcggcgaggagcgcgtc 666 Query: 599 atgatcttcac 609 || ||||||| Sbjct: 667 atcgtcttcac 677
>ref|NM_187407.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 172 bits (87), Expect = 9e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagcaggctgtc 187 ||||||||||||||| ||||||| |||||||||||||| || | ||| ||||| | || Sbjct: 637 caccaccacccggccacgttcgacacgctcgccatggacccggagctcaagcaatccatc 696 Query: 188 ctggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggct 247 | | |||||||||||| ||||||||| |||| |||||||||| || ||||| ||||| Sbjct: 697 gtcgccgacctcgaccgcttcctgaagcggaaggagtactaccgccgcatcggcaaggcg 756 Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||| ||| ||||||| || |||||||||||||||||||| || || Sbjct: 757 tggaagcgcgggtacctcctccacggcccgccaggcaccggcaagtccagcctcgttgcc 816 Query: 308 gccatggccaactacctacgtttcaatctctacgacctcgatctctc 354 |||||||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 817 gccatggccaaccacctccgcttcaacctctacgacctcgacctctc 863 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 540 tgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 1076 tgtccgggctgctcaacttcatcgacggcttgtggtcgacgagcggcgaggag 1128
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 172 bits (87), Expect = 9e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagcaggctgtc 187 ||||||||||||||| ||||||| |||||||||||||| || | ||| ||||| | || Sbjct: 19909177 caccaccacccggccacgttcgacacgctcgccatggacccggagctcaagcaatccatc 19909236 Query: 188 ctggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggct 247 | | |||||||||||| ||||||||| |||| |||||||||| || ||||| ||||| Sbjct: 19909237 gtcgccgacctcgaccgcttcctgaagcggaaggagtactaccgccgcatcggcaaggcg 19909296 Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||| ||| ||||||| || |||||||||||||||||||| || || Sbjct: 19909297 tggaagcgcgggtacctcctccacggcccgccaggcaccggcaagtccagcctcgttgcc 19909356 Query: 308 gccatggccaactacctacgtttcaatctctacgacctcgatctctc 354 |||||||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 19909357 gccatggccaaccacctccgcttcaacctctacgacctcgacctctc 19909403 Score = 167 bits (84), Expect = 5e-38 Identities = 233/280 (83%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagcaggctgtc 187 ||||||||||||||| ||||||| || ||||||||||| || | ||| ||||| | || Sbjct: 19917555 caccaccacccggccacgttcgacaccctcgccatggacccggagctcaagcaatccatc 19917614 Query: 188 ctggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggct 247 | | |||||||||||| ||||||||| |||| |||||||||| || ||||| ||||| Sbjct: 19917615 gtcgccgacctcgaccgcttcctgaagcggaaggagtactaccgccgcatcggcaaggcg 19917674 Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 19917675 tggaagcgcgggtacctcctccacggcccgcccggcaccggcaagtccagcctcgtcgcc 19917734 Query: 308 gccatggccaactacctacgtttcaatctctacgacctcgatctct-cgagtgtgcacga 366 |||||||||||| | || || ||||| |||||||||||||| |||| |||| |||||| Sbjct: 19917735 gccatggccaaccaactccgcttcaacctctacgacctcgacctctccgag-gtgcacag 19917793 Query: 367 caactcatcactgcagaggcttctcatcgacatgtccaac 406 |||||| | ||||||||||| ||||| | |||| ||||| Sbjct: 19917794 caactcggctctgcagaggctgctcattggcatgcccaac 19917833 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 540 tgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatca 599 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 19918105 tgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggagcgcgtca 19918164 Query: 600 t 600 | Sbjct: 19918165 t 19918165 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 540 tgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 19909713 tgtccgggctgctcaacttcatcgacggcttgtggtcgacgagcggcgaggag 19909765 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 236 atcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcc 295 ||||| ||||| ||||| ||||||||||| || ||||||| || ||||||||||||||| Sbjct: 5042461 atcggcaaggcgtggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtcc 5042402 Query: 296 agcctggtcgctgccatggccaactacct 324 | | || |||| ||||||||||||||||| Sbjct: 5042401 accatgatcgccgccatggccaactacct 5042373 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||||||||| || ||||||| || |||||||||||||||| | ||||||| Sbjct: 5031784 tggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtccaccatggtcgcc 5031843 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 5031844 gccatggccaactacct 5031860 Score = 73.8 bits (37), Expect = 6e-10 Identities = 145/181 (80%) Strand = Plus / Plus Query: 144 cgttcgaaacgctcgccatggatccagggctgaagcaggctgtcctggacgacctcgacc 203 ||||||| |||||||||||||| || | | |||| ||| || |||||||||||||| Sbjct: 5002284 cgttcgacacgctcgccatggacccggcgaggaagaaggacatcatggacgacctcgacg 5002343 Query: 204 ggttcctgaagaggaaagagtactaccagcgaatcgggaaggcttggaaacgcggctacc 263 ||||| ||| |||| ||||||||| ||| | |||| ||| ||||| || || |||| Sbjct: 5002344 cgttccggaacgggaaggagtactacgcgcgcgtagggagggcgtggaagcgggggtacc 5002403 Query: 264 tgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacc 323 | || ||||||| || |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 5002404 tcctgcacggcccgcccggcaccggcaagtccaccatgatcgccgccatggccaactacc 5002463 Query: 324 t 324 | Sbjct: 5002464 t 5002464 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 19904233 ctgtccgggctgctcaacctcatcgacgggctgtggtcg 19904271 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 270 acggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacct 324 ||||||| || |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 5036928 acggcccgcccggcaccggcaagtccaccatgatcgcctccatggccaactacct 5036982 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcg 587 ||||||||||||||||||||| | |||||| | ||||||| Sbjct: 5037179 ctgctcaacttcatcgacgggctctggtcggcgagcggcg 5037218 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 549 tgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcat 600 |||||||||||||||||||| | |||||| | |||||| ||||||||||| Sbjct: 5002728 tgctcaacttcatcgacgggctctggtcggcgtgcggcggcgagcgcatcat 5002779 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tggaggacgaggacgacggc 502 |||||||||||||||||||| Sbjct: 22744576 tggaggacgaggacgacggc 22744557 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ctcaagatcttcatgaacga 96 |||||||||||||||||||| Sbjct: 19917510 ctcaagatcttcatgaacga 19917529 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||| | |||||| | |||||| ||||||||| Sbjct: 5032081 ctcaacttcatcgacgggctctggtcggcgtgcggcggcgagcgcatc 5032128
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 172 bits (87), Expect = 9e-40 Identities = 192/227 (84%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagcaggctgtc 187 ||||||||||||||| ||||||| |||||||||||||| || | ||| ||||| | || Sbjct: 73827 caccaccacccggccacgttcgacacgctcgccatggacccggagctcaagcaatccatc 73886 Query: 188 ctggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggct 247 | | |||||||||||| ||||||||| |||| |||||||||| || ||||| ||||| Sbjct: 73887 gtcgccgacctcgaccgcttcctgaagcggaaggagtactaccgccgcatcggcaaggcg 73946 Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||| ||| ||||||| || |||||||||||||||||||| || || Sbjct: 73947 tggaagcgcgggtacctcctccacggcccgccaggcaccggcaagtccagcctcgttgcc 74006 Query: 308 gccatggccaactacctacgtttcaatctctacgacctcgatctctc 354 |||||||||||| |||| || ||||| |||||||||||||| ||||| Sbjct: 74007 gccatggccaaccacctccgcttcaacctctacgacctcgacctctc 74053 Score = 167 bits (84), Expect = 5e-38 Identities = 233/280 (83%), Gaps = 2/280 (0%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagcaggctgtc 187 ||||||||||||||| ||||||| || ||||||||||| || | ||| ||||| | || Sbjct: 82205 caccaccacccggccacgttcgacaccctcgccatggacccggagctcaagcaatccatc 82264 Query: 188 ctggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggct 247 | | |||||||||||| ||||||||| |||| |||||||||| || ||||| ||||| Sbjct: 82265 gtcgccgacctcgaccgcttcctgaagcggaaggagtactaccgccgcatcggcaaggcg 82324 Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||| ||| ||||||| || |||||||||||||||||||| ||||| Sbjct: 82325 tggaagcgcgggtacctcctccacggcccgcccggcaccggcaagtccagcctcgtcgcc 82384 Query: 308 gccatggccaactacctacgtttcaatctctacgacctcgatctct-cgagtgtgcacga 366 |||||||||||| | || || ||||| |||||||||||||| |||| |||| |||||| Sbjct: 82385 gccatggccaaccaactccgcttcaacctctacgacctcgacctctccgag-gtgcacag 82443 Query: 367 caactcatcactgcagaggcttctcatcgacatgtccaac 406 |||||| | ||||||||||| ||||| | |||| ||||| Sbjct: 82444 caactcggctctgcagaggctgctcattggcatgcccaac 82483 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 540 tgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatca 599 |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| ||| Sbjct: 82755 tgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggagcgcgtca 82814 Query: 600 t 600 | Sbjct: 82815 t 82815 Score = 81.8 bits (41), Expect = 2e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 540 tgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 |||| ||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct: 74363 tgtccgggctgctcaacttcatcgacggcttgtggtcgacgagcggcgaggag 74415 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 68883 ctgtccgggctgctcaacctcatcgacgggctgtggtcg 68921 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ctcaagatcttcatgaacga 96 |||||||||||||||||||| Sbjct: 82160 ctcaagatcttcatgaacga 82179
>ref|XM_475995.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1440 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 757 tacctgctctacggcccacctggcaccggcaagtccagcctcatcgccgccatggccaac 816 Query: 320 tacct 324 ||||| Sbjct: 817 tacct 821 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||| ||||||| ||||||| || |||||||||||| | ||||| ||||| Sbjct: 1033 ctgctcaactttgtcgacggtctgtggtcaaccagcggcgaggagaggatcatcgtcttc 1092 Query: 608 ac 609 || Sbjct: 1093 ac 1094
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 35909 tacctgctctacggcccacctggcaccggcaagtccagcctcatcgccgccatggccaac 35850 Query: 320 tacct 324 ||||| Sbjct: 35849 tacct 35845 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||| ||||||| ||||||| || |||||||||||| | ||||| ||||| Sbjct: 35491 ctgctcaactttgtcgacggtctgtggtcaaccagcggcgaggagaggatcatcgtcttc 35432 Query: 608 ac 609 || Sbjct: 35431 ac 35430
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 29109685 tacctgctctacggcccacctggcaccggcaagtccagcctcatcgccgccatggccaac 29109626 Query: 320 tacct 324 ||||| Sbjct: 29109625 tacct 29109621 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||| ||||||| ||||||| || |||||||||||| | ||||| ||||| Sbjct: 29109267 ctgctcaactttgtcgacggtctgtggtcaaccagcggcgaggagaggatcatcgtcttc 29109208 Query: 608 ac 609 || Sbjct: 29109207 ac 29109206
>dbj|AK111042.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-B05, full insert sequence Length = 1115 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Minus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||| Sbjct: 980 tacctgctctacggcccacctggcaccggcaagtccagcctcatcgccgccatggccaac 921 Query: 320 tacct 324 ||||| Sbjct: 920 tacct 916 Score = 42.1 bits (21), Expect = 2.1 Identities = 39/45 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||||||||| ||||||| ||||||| || |||||||||||| Sbjct: 694 ctgctcaactttgtcgacggtctgtggtcaaccagcggcgaggag 650
>dbj|AK073047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033009G15, full insert sequence Length = 2835 Score = 91.7 bits (46), Expect = 3e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 263 ctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactac 322 |||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||| Sbjct: 973 ctgctctacggcccacctggcaccggcaagtccagcctcatcgccgccatggccaactac 914 Query: 323 ct 324 || Sbjct: 913 ct 912 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||| ||||||| ||||||| || |||||||||||| | ||||| ||||| Sbjct: 692 ctgctcaactttgtcgacggtctgtggtcaaccagcggcgaggagaggatcatcgtcttc 633 Query: 608 ac 609 || Sbjct: 632 ac 631
>ref|NM_192509.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 867 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcg 594 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 556 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggagcg 611 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagc 179 ||||||||||| ||| ||||||| ||| |||||||||| || |||||||||| Sbjct: 436 caccaccaccccgccacgttcgacacggtcgccatggacccggggctgaagc 487
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcg 594 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 22637702 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggagcg 22637647 Score = 83.8 bits (42), Expect = 6e-13 Identities = 98/114 (85%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||| ||||||||||| || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 22638014 tacctcctctacggcccgcccgggacaggcaagtccagcctcgtcgccgccattgccaac 22637955 Query: 320 tacctacgtttcaatctctacgacctcgatctct-cgagtgtgcacgacaactc 372 |||| || ||||| |||||||||||||| |||| | || |||||||||||||| Sbjct: 22637954 cacctccgcttcaacctctacgacctcgacctcttccag-gtgcacgacaactc 22637902 Score = 79.8 bits (40), Expect = 1e-11 Identities = 130/160 (81%) Strand = Plus / Plus Query: 189 tggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggctt 248 |||||||||| ||| |||||||| ||||| ||||||||| |||| | |||| ||| | Sbjct: 25783059 tggacgacctggacaggttcctgggcaggaaggagtactacgagcggacggggagggcgt 25783118 Query: 249 ggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgctg 308 |||| | || ||||| || |||||||||| |||||||||||||||||||||||||| | Sbjct: 25783119 ggaagagggggtacctcatccacggcccccccggcaccggcaagtccagcctggtcgccg 25783178 Query: 309 ccatggccaactacctacgtttcaatctctacgacctcga 348 | || ||||| |||| || ||| | ||||||||||||| Sbjct: 25783179 cgatctccaaccacctccgcttcgacgtctacgacctcga 25783218 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| || ||||||||||| ||||||| || |||||||||||||||| | || |||| Sbjct: 10890834 tggaagcggggctacctgctgcacggcccgccgggcaccggcaagtccaccatgatcgcc 10890893 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 10890894 gccatggccaactacct 10890910 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagc 179 ||||||||||| ||| ||||||| ||| |||||||||| || |||||||||| Sbjct: 22638114 caccaccaccccgccacgttcgacacggtcgccatggacccggggctgaagc 22638063 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 36215675 ccctggcaccggcaagtccagcctcgtcg 36215703 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 |||||||| || ||||| || || ||||| ||||| || |||||||||||| || | || Sbjct: 23835852 tggaaacgggggtaccttctgtatggcccacctggaactggcaagtccagcttgattgca 23835911 Query: 308 gccatggccaactacct 324 ||||||||||| ||||| Sbjct: 23835912 gccatggccaattacct 23835928 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 10891131 ctgtccggcctgctcaacttcatcgacgggctctggtcg 10891169 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ctggacgacctcgaccggttcctgaaga 215 ||||||||||||| | |||||||||||| Sbjct: 29814777 ctggacgacctcgtcgggttcctgaaga 29814804
>dbj|AP003341.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0024F06 Length = 129402 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcg 594 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||||| Sbjct: 14414 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggagcg 14359 Score = 83.8 bits (42), Expect = 6e-13 Identities = 98/114 (85%), Gaps = 2/114 (1%) Strand = Plus / Minus Query: 260 tacctgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaac 319 ||||| ||||||||||| || || || |||||||||||||| ||||| ||||| |||||| Sbjct: 14726 tacctcctctacggcccgcccgggacaggcaagtccagcctcgtcgccgccattgccaac 14667 Query: 320 tacctacgtttcaatctctacgacctcgatctct-cgagtgtgcacgacaactc 372 |||| || ||||| |||||||||||||| |||| | || |||||||||||||| Sbjct: 14666 cacctccgcttcaacctctacgacctcgacctcttccag-gtgcacgacaactc 14614 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Minus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatccagggctgaagc 179 ||||||||||| ||| ||||||| ||| |||||||||| || |||||||||| Sbjct: 14826 caccaccaccccgccacgttcgacacggtcgccatggacccggggctgaagc 14775
>ref|NM_196128.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OJ1341F06.19), mRNA Length = 747 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 382 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggag 435 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatcc 168 ||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 259 caccaccacccggccacgttcgacacggtcgccatggatcc 299
>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02, complete sequence Length = 131922 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 85026 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggag 85079 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatcc 168 ||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 84800 caccaccacccggccacgttcgacacggtcgccatggatcc 84840
>gb|AC116926.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OJ1341F06, from chromosome 10, complete sequence Length = 102520 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 89417 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggag 89364 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatcc 168 ||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 89643 caccaccacccggccacgttcgacacggtcgccatggatcc 89603
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||||||| |||||||| | |||||| ||||| ||| Sbjct: 13924566 ctgtcggggctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagcggatc 13924625 Query: 599 atgatcttcacgac 612 || ||||||||||| Sbjct: 13924626 atcatcttcacgac 13924639 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||| Sbjct: 27459546 ctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatc 27459605 Query: 599 atgatcttcacgacca 614 || ||||||||||||| Sbjct: 27459606 atcatcttcacgacca 27459621 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 27449730 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 27449671 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 27449670 ccatgatcgccgccatggccaact 27449647 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| || |||||||||||||| || |||||||||||||||| | || |||| Sbjct: 13924239 tggaagcgcggatatctgctctacggcccgcccggcaccggcaagtccaccatgatcgcc 13924298 Query: 308 gccatggccaact 320 ||||||||||||| Sbjct: 13924299 gccatggccaact 13924311 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 536 acactgtcggggctgctcaacttcatcgacgggttgtggtcg 577 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 16915472 acactgtcagggctgctcaacttcatcgacgggctgtggtcg 16915431 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| |||||||||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 27463284 tcggcaaggcgtggaaacgcggctacctgctgttcgggccacccggcacaggcaagtcca 27463343 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 27463344 ccatgatcgccgccatggcaaacttccta 27463372 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||||| Sbjct: 27459241 tcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtcca 27459300 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 27459301 ccatgatcgccgccatggcaaacttccta 27459329 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 27449395 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 27449336 Query: 608 acgacca 614 ||||||| Sbjct: 27449335 acgacca 27449329 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtc 294 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||| Sbjct: 20323871 tcggcaaggcatggaagcgcggctacctgctgtgcgggccacccggcaccggcaagtc 20323928 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 533 ataacactgtcggggctgctcaacttcatcgacgggttgtggtc 576 ||||| |||||||||||||||||||| || || ||| ||||||| Sbjct: 16857624 ataacgctgtcggggctgctcaactttattgatgggctgtggtc 16857667 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 134 cacccggcctcgttcgaaacgctcgccatgga 165 |||||||| ||||||| |||||||||||||| Sbjct: 16857258 cacccggcgacgttcgacacgctcgccatgga 16857289
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 11277038 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggag 11277091 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatcc 168 ||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 11276812 caccaccacccggccacgttcgacacggtcgccatggatcc 11276852 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtcca 296 ||||||||||||||||||| | |||||||| ||||||| Sbjct: 19563760 gctacctgctctacggcccgtccggcaccgggaagtcca 19563722
>dbj|AK063710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B10, full insert sequence Length = 1620 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||||||| |||||||| | |||||| ||||| ||| Sbjct: 888 ctgtcggggctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagcggatc 947 Query: 599 atgatcttcacgac 612 || ||||||||||| Sbjct: 948 atcatcttcacgac 961 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| || |||||||||||||| || |||||||||||||||| | || |||| Sbjct: 561 tggaagcgcggatatctgctctacggcccgcccggcaccggcaagtccaccatgatcgcc 620 Query: 308 gccatggccaact 320 ||||||||||||| Sbjct: 621 gccatggccaact 633
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggag 592 ||||| |||||||||||||||||||||||| |||||||||| |||||||||||| Sbjct: 11283478 ctgtccgggctgctcaacttcatcgacgggctgtggtcgacgagcggcgaggag 11283531 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 128 caccaccacccggcctcgttcgaaacgctcgccatggatcc 168 ||||||||||||||| ||||||| ||| ||||||||||||| Sbjct: 11283252 caccaccacccggccacgttcgacacggtcgccatggatcc 11283292 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtcca 296 ||||||||||||||||||| | |||||||| ||||||| Sbjct: 19575036 gctacctgctctacggcccgtccggcaccgggaagtcca 19574998
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||||||| |||||||| | |||||| ||||| ||| Sbjct: 13878846 ctgtcggggctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagcggatc 13878905 Query: 599 atgatcttcacgac 612 || ||||||||||| Sbjct: 13878906 atcatcttcacgac 13878919 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||| Sbjct: 27385146 ctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatc 27385205 Query: 599 atgatcttcacgacca 614 || ||||||||||||| Sbjct: 27385206 atcatcttcacgacca 27385221 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 27375330 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 27375271 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 27375270 ccatgatcgccgccatggccaact 27375247 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| || |||||||||||||| || |||||||||||||||| | || |||| Sbjct: 13878519 tggaagcgcggatatctgctctacggcccgcccggcaccggcaagtccaccatgatcgcc 13878578 Query: 308 gccatggccaact 320 ||||||||||||| Sbjct: 13878579 gccatggccaact 13878591 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 536 acactgtcggggctgctcaacttcatcgacgggttgtggtcg 577 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 16868705 acactgtcagggctgctcaacttcatcgacgggctgtggtcg 16868664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| |||||||||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 27388884 tcggcaaggcgtggaaacgcggctacctgctgttcgggccacccggcacaggcaagtcca 27388943 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 27388944 ccatgatcgccgccatggcaaacttccta 27388972 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||||| Sbjct: 27384841 tcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtcca 27384900 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 27384901 ccatgatcgccgccatggcaaacttccta 27384929 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 27374995 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 27374936 Query: 608 acgacca 614 ||||||| Sbjct: 27374935 acgacca 27374929 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtc 294 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||| Sbjct: 20250085 tcggcaaggcatggaagcgcggctacctgctgtgcgggccacccggcaccggcaagtc 20250142 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 533 ataacactgtcggggctgctcaacttcatcgacgggttgtggtc 576 ||||| |||||||||||||||||||| || || ||| ||||||| Sbjct: 16810857 ataacgctgtcggggctgctcaactttattgatgggctgtggtc 16810900 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 134 cacccggcctcgttcgaaacgctcgccatgga 165 |||||||| ||||||| |||||||||||||| Sbjct: 16810491 cacccggcgacgttcgacacgctcgccatgga 16810522
>emb|AL928747.3|CNS08CBK Oryza sativa chromosome 12, . BAC OSJNBa0017A21 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144552 Score = 83.8 bits (42), Expect = 6e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||||||| |||||||| | |||||| ||||| ||| Sbjct: 61194 ctgtcggggctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagcggatc 61253 Query: 599 atgatcttcacgac 612 || ||||||||||| Sbjct: 61254 atcatcttcacgac 61267 Score = 73.8 bits (37), Expect = 6e-10 Identities = 64/73 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| || |||||||||||||| || |||||||||||||||| | || |||| Sbjct: 60867 tggaagcgcggatatctgctctacggcccgcccggcaccggcaagtccaccatgatcgcc 60926 Query: 308 gccatggccaact 320 ||||||||||||| Sbjct: 60927 gccatggccaact 60939
>dbj|AP005124.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0049I08 Length = 144379 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Minus Query: 236 atcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcc 295 ||||| ||||| ||||| ||||||||||| || ||||||| || ||||||||||||||| Sbjct: 84150 atcggcaaggcgtggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtcc 84091 Query: 296 agcctggtcgctgccatggccaactacct 324 | | || |||| ||||||||||||||||| Sbjct: 84090 accatgatcgccgccatggccaactacct 84062 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||||||||| || ||||||| || |||||||||||||||| | ||||||| Sbjct: 73473 tggaagcgcggctacctcctgcacggcccgcccggcaccggcaagtccaccatggtcgcc 73532 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 73533 gccatggccaactacct 73549 Score = 73.8 bits (37), Expect = 6e-10 Identities = 145/181 (80%) Strand = Plus / Plus Query: 144 cgttcgaaacgctcgccatggatccagggctgaagcaggctgtcctggacgacctcgacc 203 ||||||| |||||||||||||| || | | |||| ||| || |||||||||||||| Sbjct: 43973 cgttcgacacgctcgccatggacccggcgaggaagaaggacatcatggacgacctcgacg 44032 Query: 204 ggttcctgaagaggaaagagtactaccagcgaatcgggaaggcttggaaacgcggctacc 263 ||||| ||| |||| ||||||||| ||| | |||| ||| ||||| || || |||| Sbjct: 44033 cgttccggaacgggaaggagtactacgcgcgcgtagggagggcgtggaagcgggggtacc 44092 Query: 264 tgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacc 323 | || ||||||| || |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 44093 tcctgcacggcccgcccggcaccggcaagtccaccatgatcgccgccatggccaactacc 44152 Query: 324 t 324 | Sbjct: 44153 t 44153 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 270 acggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacct 324 ||||||| || |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 78617 acggcccgcccggcaccggcaagtccaccatgatcgcctccatggccaactacct 78671 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcg 587 ||||||||||||||||||||| | |||||| | ||||||| Sbjct: 78868 ctgctcaacttcatcgacgggctctggtcggcgagcggcg 78907 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 549 tgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcat 600 |||||||||||||||||||| | |||||| | |||||| ||||||||||| Sbjct: 44417 tgctcaacttcatcgacgggctctggtcggcgtgcggcggcgagcgcatcat 44468 Score = 40.1 bits (20), Expect = 8.4 Identities = 41/48 (85%) Strand = Plus / Plus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||| | |||||| | |||||| ||||||||| Sbjct: 73770 ctcaacttcatcgacgggctctggtcggcgtgcggcggcgagcgcatc 73817
>ref|NM_192276.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1542 Score = 79.8 bits (40), Expect = 1e-11 Identities = 130/160 (81%) Strand = Plus / Plus Query: 189 tggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggctt 248 |||||||||| ||| |||||||| ||||| ||||||||| |||| | |||| ||| | Sbjct: 650 tggacgacctggacaggttcctgggcaggaaggagtactacgagcggacggggagggcgt 709 Query: 249 ggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgctg 308 |||| | || ||||| || |||||||||| |||||||||||||||||||||||||| | Sbjct: 710 ggaagagggggtacctcatccacggcccccccggcaccggcaagtccagcctggtcgccg 769 Query: 309 ccatggccaactacctacgtttcaatctctacgacctcga 348 | || ||||| |||| || ||| | ||||||||||||| Sbjct: 770 cgatctccaaccacctccgcttcgacgtctacgacctcga 809
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 79.8 bits (40), Expect = 1e-11 Identities = 130/160 (81%) Strand = Plus / Plus Query: 189 tggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggctt 248 |||||||||| ||| |||||||| ||||| ||||||||| |||| | |||| ||| | Sbjct: 22983 tggacgacctggacaggttcctgggcaggaaggagtactacgagcggacggggagggcgt 23042 Query: 249 ggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgctg 308 |||| | || ||||| || |||||||||| |||||||||||||||||||||||||| | Sbjct: 23043 ggaagagggggtacctcatccacggcccccccggcaccggcaagtccagcctggtcgccg 23102 Query: 309 ccatggccaactacctacgtttcaatctctacgacctcga 348 | || ||||| |||| || ||| | ||||||||||||| Sbjct: 23103 cgatctccaaccacctccgcttcgacgtctacgacctcga 23142
>dbj|AP003855.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0039G05 Length = 138429 Score = 79.8 bits (40), Expect = 1e-11 Identities = 130/160 (81%) Strand = Plus / Plus Query: 189 tggacgacctcgaccggttcctgaagaggaaagagtactaccagcgaatcgggaaggctt 248 |||||||||| ||| |||||||| ||||| ||||||||| |||| | |||| ||| | Sbjct: 85523 tggacgacctggacaggttcctgggcaggaaggagtactacgagcggacggggagggcgt 85582 Query: 249 ggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgctg 308 |||| | || ||||| || |||||||||| |||||||||||||||||||||||||| | Sbjct: 85583 ggaagagggggtacctcatccacggcccccccggcaccggcaagtccagcctggtcgccg 85642 Query: 309 ccatggccaactacctacgtttcaatctctacgacctcga 348 | || ||||| |||| || ||| | ||||||||||||| Sbjct: 85643 cgatctccaaccacctccgcttcgacgtctacgacctcga 85682
>emb|AL928743.1|CNS08CBG Oryza sativa chromosome 12, . BAC OSJNBb0011N16 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 55237 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 32088 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 32147 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 32148 ccatgatcgccgccatggccaact 32171 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||| Sbjct: 22272 ctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatc 22213 Query: 599 atgatcttcacgacca 614 || ||||||||||||| Sbjct: 22212 atcatcttcacgacca 22197 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||||| Sbjct: 22577 tcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtcca 22518 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 22517 ccatgatcgccgccatggcaaacttccta 22489 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| |||||||||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 18534 tcggcaaggcgtggaaacgcggctacctgctgttcgggccacccggcacaggcaagtcca 18475 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 18474 ccatgatcgccgccatggcaaacttccta 18446 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 32423 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 32482 Query: 608 acgacca 614 ||||||| Sbjct: 32483 acgacca 32489
>dbj|AK122160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147F11, full insert sequence Length = 1915 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 724 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 783 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 784 ccatgatcgccgccatggccaact 807 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 1059 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 1118 Query: 608 acgacca 614 ||||||| Sbjct: 1119 acgacca 1125
>dbj|AK110532.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-A05, full insert sequence Length = 1500 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||| Sbjct: 915 ctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatc 974 Query: 599 atgatcttcacgacca 614 || ||||||||||||| Sbjct: 975 atcatcttcacgacca 990 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||||| Sbjct: 610 tcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtcca 669 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 670 ccatgatcgccgccatggcaaacttccta 698
>emb|AL732378.3|CNS08C91 Oryza sativa chromosome 12, . BAC OSJNBa0063N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109222 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 |||||||||||||||||||||||||| ||| |||||||| | |||||| ||||| ||| Sbjct: 35460 ctgtcggggctgctcaacttcatcgatgggctgtggtcggcgtgcggcggcgagcggatc 35519 Query: 599 atgatcttcacgacca 614 || ||||||||||||| Sbjct: 35520 atcatcttcacgacca 35535 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 25644 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 25585 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 25584 ccatgatcgccgccatggccaact 25561 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| |||||||||||||||||||| | ||| || || ||||| |||||||||| Sbjct: 39198 tcggcaaggcgtggaaacgcggctacctgctgttcgggccacccggcacaggcaagtcca 39257 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 39258 ccatgatcgccgccatggcaaacttccta 39286 Score = 65.9 bits (33), Expect = 1e-07 Identities = 75/89 (84%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||||| Sbjct: 35155 tcggcaaggcatggaagcgcggctacctgctgttcgggccacccggcaccggcaagtcca 35214 Query: 297 gcctggtcgctgccatggccaactaccta 325 | || |||| |||||||| |||| |||| Sbjct: 35215 ccatgatcgccgccatggcaaacttccta 35243 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 25309 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 25250 Query: 608 acgacca 614 ||||||| Sbjct: 25249 acgacca 25243
>emb|AL731762.2|CNS07YPW Oryza sativa chromosome 12, . BAC OJ1119_E02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 124605 Score = 79.8 bits (40), Expect = 1e-11 Identities = 73/84 (86%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||||||||| || |||||||||| |||||||||||||||| Sbjct: 118050 tcggcaaggcctggaagcgcggctacctcctgcacggcccccccggcaccggcaagtcca 117991 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 117990 ccatgatcgccgccatggccaact 117967 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||||| ||| | ||||| |||||| Sbjct: 117715 ctgctcaacttcatcgacgggctgtggtcggcgtgcggcggcgagaggatcatcatcttc 117656 Query: 608 acgacca 614 ||||||| Sbjct: 117655 acgacca 117649
>ref|NM_183658.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1584 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| || ||||||||||| ||||||| || |||||||||||||||| | || |||| Sbjct: 799 tggaagcggggctacctgctgcacggcccgccgggcaccggcaagtccaccatgatcgcc 858 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 859 gccatggccaactacct 875 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 1096 ctgtccggcctgctcaacttcatcgacgggctctggtcg 1134
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| || ||||||||||| ||||||| || |||||||||||||||| | || |||| Sbjct: 77850 tggaagcggggctacctgctgcacggcccgccgggcaccggcaagtccaccatgatcgcc 77909 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 77910 gccatggccaactacct 77926 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 78147 ctgtccggcctgctcaacttcatcgacgggctctggtcg 78185
>dbj|AK109883.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-D07, full insert sequence Length = 1801 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| || ||||||||||| ||||||| || |||||||||||||||| | || |||| Sbjct: 875 tggaagcggggctacctgctgcacggcccgccgggcaccggcaagtccaccatgatcgcc 934 Query: 308 gccatggccaactacct 324 ||||||||||||||||| Sbjct: 935 gccatggccaactacct 951 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| || ||||||||||||||||||||| | |||||| Sbjct: 1172 ctgtccggcctgctcaacttcatcgacgggctctggtcg 1210
>dbj|AK065505.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N01, full insert sequence Length = 1739 Score = 73.8 bits (37), Expect = 6e-10 Identities = 145/181 (80%) Strand = Plus / Plus Query: 144 cgttcgaaacgctcgccatggatccagggctgaagcaggctgtcctggacgacctcgacc 203 ||||||| |||||||||||||| || | | |||| ||| || |||||||||||||| Sbjct: 726 cgttcgacacgctcgccatggacccggcgaggaagaaggacatcatggacgacctcgacg 785 Query: 204 ggttcctgaagaggaaagagtactaccagcgaatcgggaaggcttggaaacgcggctacc 263 ||||| ||| |||| ||||||||| ||| | |||| ||| ||||| || || |||| Sbjct: 786 cgttccggaacgggaaggagtactacgcgcgcgtagggagggcgtggaagcgggggtacc 845 Query: 264 tgctctacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacc 323 | || ||||||| || |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 846 tcctgcacggcccgcccggcaccggcaagtccaccatgatcgccgccatggccaactacc 905 Query: 324 t 324 | Sbjct: 906 t 906 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 549 tgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcat 600 |||||||||||||||||||| | |||||| | |||||| ||||||||||| Sbjct: 1170 tgctcaacttcatcgacgggctctggtcggcgtgcggcggcgagcgcatcat 1221
>ref|XM_469982.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1800 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 857 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 916 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 917 ccatgatcgccgccatggccaactacct 944
>emb|CR626929.1| Triticum aestivum Length = 20745 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || ||||||||||||||||||| Sbjct: 20036 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcctggcaccggcaagtcca 19977 Query: 297 gcctggtcgctgccatggccaact 320 | || |||||||||||||||||| Sbjct: 19976 ccatgatcgctgccatggccaact 19953 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || ||||||||||||||||||| Sbjct: 15593 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcctggcaccggcaagtcca 15534 Query: 297 gcctggtcgctgccatggccaact 320 | || |||||||||||||||||| Sbjct: 15533 ccatgatcgctgccatggccaact 15510 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | |||||| | ||||||| ||||| ||||| |||||||| Sbjct: 17577 ctcaacttcatcgacgggctatggtcggcaagcggcggtgagcggatcatcatcttcacc 17518 Query: 611 acca 614 |||| Sbjct: 17517 acca 17514 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||| | |||| | ||||| || || |||||| Sbjct: 15272 ctgctcaacttcatcgacgggctgtggtcggcctgcgggggtgagcggattatcatcttc 15213 Query: 608 acgacca 614 ||||||| Sbjct: 15212 acgacca 15206 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Minus Query: 269 tacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaa 318 |||||||| || |||||||||||||||| || |||| ||||||||||| Sbjct: 17880 tacggcccgcccggcaccggcaagtccacaatgatcgccgccatggccaa 17831
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||||||| ||||||| || |||||||||||| ||||||| ||||| Sbjct: 28801709 tggaagcgcgggtacctgctccacggcccgcccggcaccggcaagaccagcctcgtcgcc 28801650 Query: 308 gccatggccaac 319 ||||| |||||| Sbjct: 28801649 gccatcgccaac 28801638 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||||||| | ||||| || |||||||||||| ||||||| ||||| Sbjct: 28797429 tggaagcgcgggtacctgctccatggcccgcccggcaccggcaagaccagcctcgtcgcc 28797488 Query: 308 gccatggccaac 319 ||||| |||||| Sbjct: 28797489 gccatcgccaac 28797500 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 ctctacggcccccctggcaccggcaag 292 |||||||||||||| |||||||||||| Sbjct: 29817201 ctctacggcccccccggcaccggcaag 29817227
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 65307 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 65248 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 65247 ccatgatcgccgccatggccaactacct 65220 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||| ||||||||||||||| |||||||| Sbjct: 59345 ctgtccgggctgctaaacttcatcgacgggctgtggtcg 59307
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Minus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||||||| ||||||| || |||||||||||| ||||||| ||||| Sbjct: 109484 tggaagcgcgggtacctgctccacggcccgcccggcaccggcaagaccagcctcgtcgcc 109425 Query: 308 gccatggccaac 319 ||||| |||||| Sbjct: 109424 gccatcgccaac 109413 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||| ||||||||| | ||||| || |||||||||||| ||||||| ||||| Sbjct: 105204 tggaagcgcgggtacctgctccatggcccgcccggcaccggcaagaccagcctcgtcgcc 105263 Query: 308 gccatggccaac 319 ||||| |||||| Sbjct: 105264 gccatcgccaac 105275
>dbj|AK110996.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-E06, full insert sequence Length = 1454 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 318 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 259 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 258 ccatgatcgccgccatggccaactacct 231
>dbj|AK104696.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-A09, full insert sequence Length = 1821 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 882 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 941 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 942 ccatgatcgccgccatggccaactacct 969
>dbj|AK099212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J17, full insert sequence Length = 1772 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 880 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 939 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 940 ccatgatcgccgccatggccaactacct 967
>dbj|AK070731.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061A01, full insert sequence Length = 1851 Score = 71.9 bits (36), Expect = 2e-09 Identities = 75/88 (85%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||||||||| ||||| ||||||||||| || ||||||| || ||||||||||| ||| Sbjct: 880 tcgggaaggcgtggaagcgcggctacctcctgcacggcccgccgggcaccggcaaatccg 939 Query: 297 gcctggtcgctgccatggccaactacct 324 | || |||| ||||||||||||||||| Sbjct: 940 ccatgatcgccgccatggccaactacct 967
>emb|AL732639.5|CNS08C9E Oryza sativa chromosome 12, . BAC OSJNBa0038H18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 150238 Score = 67.9 bits (34), Expect = 4e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 536 acactgtcggggctgctcaacttcatcgacgggttgtggtcg 577 |||||||| |||||||||||||||||||||||| |||||||| Sbjct: 37515 acactgtcagggctgctcaacttcatcgacgggctgtggtcg 37474
>emb|CR626933.1| Triticum turgidum Length = 25216 Score = 61.9 bits (31), Expect = 2e-06 Identities = 58/67 (86%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttc 607 ||||||||||||||||||||| |||||||||| |||| | ||||| || || |||||| Sbjct: 12554 ctgctcaacttcatcgacgggctgtggtcgacctgcgggggtgagcggattatcatcttc 12495 Query: 608 acgacca 614 ||||||| Sbjct: 12494 acgacca 12488 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | |||||| | ||||||| ||||| ||||| |||||||| Sbjct: 14848 ctcaacttcatcgacgggctatggtcggcaagcggcggtgagcggatcatcatcttcacc 14789 Query: 611 acca 614 |||| Sbjct: 14788 acca 14785 Score = 48.1 bits (24), Expect = 0.034 Identities = 69/84 (82%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| Sbjct: 24507 tcggcaaggcgtggaagcgcgggtacctcctttatgggccgcccggcaccggcaagtcca 24448 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| || |||||||||| Sbjct: 24447 ccatgatcgccgctatggccaact 24424 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Minus Query: 269 tacggcccccctggcaccggcaagtccagcctggtcgctgccatggccaa 318 |||||||| || |||||||||||||||| || |||| ||||||||||| Sbjct: 15151 tacggcccgcccggcaccggcaagtccacaatgatcgccgccatggccaa 15102
>gb|AY107953.1| Zea mays PCO122089 mRNA sequence Length = 643 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 |||||||| ||||||||||||||||||||| |||||||| Sbjct: 103 ctgtcgggcctgctcaacttcatcgacgggctgtggtcg 141
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 16568417 ctgtccgggctgctcaacttcaccgacggcctgtggtcgtgctgcggcgaggagcgcatc 16568476 Query: 599 at 600 || Sbjct: 16568477 at 16568478 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||||||||| || |||||||| || || || |||||||| ||| || |||| Sbjct: 15814672 tggaagcgcggctacctcctgtacggcccgcccgggacgggcaagtcgagcatgatcgcc 15814613 Query: 308 gccatggccaactacct 324 |||||||| ||| |||| Sbjct: 15814612 gccatggcgaaccacct 15814596
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatc 598 ||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||| Sbjct: 100642 ctgtccgggctgctcaacttcaccgacggcctgtggtcgtgctgcggcgaggagcgcatc 100701 Query: 599 at 600 || Sbjct: 100702 at 100703
>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness locus region Length = 129099 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || ||||| || || |||||||||||||||| Sbjct: 122190 tcggcaaggcgtggaagcgcgggtacctcctttacggaccgcccggcaccggcaagtcca 122249 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| |||||||| |||| Sbjct: 122250 ccatgatcgccgccatggctaact 122273 Score = 54.0 bits (27), Expect = 6e-04 Identities = 66/79 (83%) Strand = Plus / Plus Query: 242 aaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctg 301 ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| | || Sbjct: 23449 aaggcgtggaagcgcgggtacctcctttatggaccgcccggcaccggcaagtccaccatg 23508 Query: 302 gtcgctgccatggccaact 320 |||| ||||||||||||| Sbjct: 23509 atcgccgccatggccaact 23527 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Plus Query: 542 tcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatg 601 ||||| || |||||||||||||||||| | ||||| || |||| | ||||| ||||| Sbjct: 23773 tcgggcctcctcaacttcatcgacgggctatggtctgcttgcggaggtgagcggatcatc 23832 Query: 602 atcttcacgacca 614 |||||||| |||| Sbjct: 23833 atcttcaccacca 23845
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| Sbjct: 93689 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcccggcaccggcaagtcca 93630 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 93629 ccatgatcgccgccatggccaact 93606 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| Sbjct: 67179 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcccggcaccggcaagtcca 67238 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 67239 ccatgatcgccgccatggccaact 67262 Score = 50.1 bits (25), Expect = 0.009 Identities = 43/49 (87%) Strand = Plus / Minus Query: 272 ggcccccctggcaccggcaagtccagcctggtcgctgccatggccaact 320 ||||| ||||||||||||||||||| | || | || ||||||||||||| Sbjct: 88356 ggcccgcctggcaccggcaagtccaccatgatagccgccatggccaact 88308 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 134 cacccggcctcgttcgaaacgctcgccatgga 165 ||||||||| ||||||| |||||||||||||| Sbjct: 70040 cacccggccacgttcgacacgctcgccatgga 70071 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgg 567 |||||||||||||||||||| Sbjct: 88056 ctgctcaacttcatcgacgg 88037 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Plus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | ||||| | ||||||| ||||| ||| | |||||||| Sbjct: 70478 ctcaacttcatcgacgggctatggtcagcaagcggcggtgagcggatcttcatcttcacc 70537 Query: 611 acca 614 |||| Sbjct: 70538 acca 70541 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 269 tacggcccccctggcaccggcaagtcca 296 |||||||| || |||||||||||||||| Sbjct: 70175 tacggcccgcccggcaccggcaagtcca 70202
>emb|CR626932.1| Triticum turgidum Length = 19229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| Sbjct: 18523 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcccggcaccggcaagtcca 18464 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 18463 ccatgatcgccgccatggccaact 18440 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | |||||| | ||||||| ||||| ||||| |||||||| Sbjct: 5335 ctcaacttcatcgacgggctatggtcggcaagcggcggtgagcggatcatcatcttcacc 5394 Query: 611 acca 614 |||| Sbjct: 5395 acca 5398 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcg 577 ||||||||||||||||||||| |||||||| Sbjct: 12519 ctgctcaacttcatcgacgggctgtggtcg 12490 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 134 cacccggcctcgttcgaaacgctcgccatggat 166 ||||||||| ||||||| ||||||||||||||| Sbjct: 15284 cacccggccacgttcgacacgctcgccatggat 15252 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 542 tcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatg 601 ||||| || |||||||||||||||||| | ||||| || |||| | ||||| ||||| Sbjct: 18194 tcgggcctcctcaacttcatcgacgggctatggtctgcttgcgggggtgagcggatcatc 18135 Query: 602 atcttcacgacca 614 |||||||| |||| Sbjct: 18134 atcttcaccacca 18122 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Minus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | ||||| | ||||||| |||| ||||| |||||||| Sbjct: 14848 ctcaacttcatcgacgggctatggtcagcaagcggcggtgagcagatcatcatcttcacc 14789 Query: 611 acca 614 |||| Sbjct: 14788 acca 14785
>emb|CR626930.1| Triticum aestivum Length = 19274 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtcca 296 |||| ||||| ||||| ||||| ||||| || || || || || |||||||||||||||| Sbjct: 18568 tcggcaaggcgtggaagcgcgggtacctcctttatggaccgcccggcaccggcaagtcca 18509 Query: 297 gcctggtcgctgccatggccaact 320 | || |||| ||||||||||||| Sbjct: 18508 ccatgatcgccgccatggccaact 18485 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Plus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | |||||| | ||||||| ||||| ||||| |||||||| Sbjct: 5335 ctcaacttcatcgacgggctatggtcggcaagcggcggtgagcggatcatcatcttcacc 5394 Query: 611 acca 614 |||| Sbjct: 5395 acca 5398 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 548 ctgctcaacttcatcgacgggttgtggtcg 577 ||||||||||||||||||||| |||||||| Sbjct: 12517 ctgctcaacttcatcgacgggctgtggtcg 12488 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 134 cacccggcctcgttcgaaacgctcgccatggat 166 ||||||||| ||||||| ||||||||||||||| Sbjct: 15313 cacccggccacgttcgacacgctcgccatggat 15281 Score = 42.1 bits (21), Expect = 2.1 Identities = 60/73 (82%) Strand = Plus / Minus Query: 542 tcggggctgctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatg 601 ||||| || |||||||||||||||||| | ||||| || |||| | ||||| ||||| Sbjct: 18239 tcgggcctcctcaacttcatcgacgggctatggtctgcttgcgggggtgagcggatcatc 18180 Query: 602 atcttcacgacca 614 |||||||| |||| Sbjct: 18179 atcttcaccacca 18167 Score = 40.1 bits (20), Expect = 8.4 Identities = 53/64 (82%) Strand = Plus / Minus Query: 551 ctcaacttcatcgacgggttgtggtcgactagcggcgaggagcgcatcatgatcttcacg 610 |||||||||||||||||| | ||||| | ||||||| |||| ||||| |||||||| Sbjct: 14877 ctcaacttcatcgacgggctatggtcagcaagcggcggtgagcagatcatcatcttcacc 14818 Query: 611 acca 614 |||| Sbjct: 14817 acca 14814
>ref|XM_469983.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1578 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||| ||||||||||||||| |||||||| Sbjct: 1177 ctgtccgggctgctaaacttcatcgacgggctgtggtcg 1215
>ref|NM_187406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 945 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 539 ctgtcggggctgctcaacttcatcgacgggttgtggtcg 577 ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 580 ctgtccgggctgctcaacctcatcgacgggctgtggtcg 618
>emb|AL731745.5|CNS08C7U Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0070A12 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 41351 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 237 tcgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtc 294 |||| ||||| ||||| |||||||||||||| | ||| || || |||||||||||||| Sbjct: 37302 tcggcaaggcatggaagcgcggctacctgctgtgcgggccacccggcaccggcaagtc 37359
>ref|NM_190566.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1905 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 69 ccctggcaccggcaagtccagcctcgtcg 97
>ref|NM_192679.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1461 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 |||||||| || ||||| || || ||||| ||||| || |||||||||||| || | || Sbjct: 733 tggaaacgggggtaccttctgtatggcccacctggaactggcaagtccagcttgattgca 792 Query: 308 gccatggccaactacct 324 ||||||||||| ||||| Sbjct: 793 gccatggccaattacct 809
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete sequence Length = 166888 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 35313 ccctggcaccggcaagtccagcctcgtcg 35341 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 280 tggcaccggcaagtccagcctggtcgc 306 ||||||||||||||||||||| ||||| Sbjct: 31062 tggcaccggcaagtccagcctcgtcgc 31088
>ref|XM_958357.1| Neurospora crassa OR74A MSP1 related protein [MIPS] (NCU05459.1) partial mRNA Length = 3315 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 256 cggctacctgctctacggcccccctggcaccggcaag 292 ||||| |||||||||||| ||||| |||||||||||| Sbjct: 2394 cggctgcctgctctacgggccccccggcaccggcaag 2430
>ref|XM_325313.1| Neurospora crassa OR74A MSP1 related protein [MIPS] (NCU05459.1) partial mRNA Length = 3315 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 256 cggctacctgctctacggcccccctggcaccggcaag 292 ||||| |||||||||||| ||||| |||||||||||| Sbjct: 2394 cggctgcctgctctacgggccccccggcaccggcaag 2430
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 281 ggcaccggcaagtccagcctggtcgctgc 309 ||||||||||||||||||||| ||||||| Sbjct: 3767206 ggcaccggcaagtccagcctgttcgctgc 3767178
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete sequence Length = 126862 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 1136 ccctggcaccggcaagtccagcctcgtcg 1108 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 280 tggcaccggcaagtccagcctggtcgc 306 ||||||||||||||||||||| ||||| Sbjct: 5387 tggcaccggcaagtccagcctcgtcgc 5361
>emb|AL355933.1|NCB8B20 Neurospora crassa DNA linkage group II BAC clone B8B20 Length = 86476 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Minus Query: 256 cggctacctgctctacggcccccctggcaccggcaag 292 ||||| |||||||||||| ||||| |||||||||||| Sbjct: 2059 cggctgcctgctctacgggccccccggcaccggcaag 2023
>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406G08 Length = 144233 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 92688 ccctggcaccggcaagtccagcctcgtcg 92716
>dbj|AP003022.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0681B11 Length = 144091 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 |||||||| || ||||| || || ||||| ||||| || |||||||||||| || | || Sbjct: 116437 tggaaacgggggtaccttctgtatggcccacctggaactggcaagtccagcttgattgca 116496 Query: 308 gccatggccaactacct 324 ||||||||||| ||||| Sbjct: 116497 gccatggccaattacct 116513
>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0039E17 Length = 144126 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Minus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 ||||| ||||||||||| || |||||||| || || || |||||||| ||| || |||| Sbjct: 99858 tggaagcgcggctacctcctgtacggcccgcccgggacgggcaagtcgagcatgatcgcc 99799 Query: 308 gccatggccaactacct 324 |||||||| ||| |||| Sbjct: 99798 gccatggcgaaccacct 99782
>dbj|AK120157.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030D19, full insert sequence Length = 1665 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/77 (83%) Strand = Plus / Plus Query: 248 tggaaacgcggctacctgctctacggcccccctggcaccggcaagtccagcctggtcgct 307 |||||||| || ||||| || || ||||| ||||| || |||||||||||| || | || Sbjct: 775 tggaaacgggggtaccttctgtatggcccacctggaactggcaagtccagcttgattgca 834 Query: 308 gccatggccaactacct 324 ||||||||||| ||||| Sbjct: 835 gccatggccaattacct 851
>dbj|AK101920.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071K01, full insert sequence Length = 2418 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 277 ccctggcaccggcaagtccagcctggtcg 305 |||||||||||||||||||||||| |||| Sbjct: 193 ccctggcaccggcaagtccagcctcgtcg 221
>emb|AL389899.1|NCB7J19 Neurospora crassa DNA linkage group II BAC clone B7J19 Length = 57906 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 256 cggctacctgctctacggcccccctggcaccggcaag 292 ||||| |||||||||||| ||||| |||||||||||| Sbjct: 20412 cggctgcctgctctacgggccccccggcaccggcaag 20448
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 475 ccactccttggaggacgaggacgac 499 ||||||||||||||||||||||||| Sbjct: 103 ccactccttggaggacgaggacgac 127
>dbj|AK109791.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-D09, full insert sequence Length = 1855 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 548 ctgctcaacttcatcgacgggttgtggtcgactagcggcg 587 ||||||||||||||||||||| | |||||| | ||||||| Sbjct: 1156 ctgctcaacttcatcgacgggctctggtcggcgagcggcg 1195 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcctggtcgctgccatggccaactacct 324 |||||||||||||||| | || |||| |||||||||||||||| Sbjct: 916 ggcaccggcaagtccaccatgatcgcctccatggccaactacct 959
>emb|AL831804.5|CNS08CAH Oryza sativa chromosome 12, . BAC OSJNBb0027C15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 115632 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 533 ataacactgtcggggctgctcaacttcatcgacgggttgtggtc 576 ||||| |||||||||||||||||||| || || ||| ||||||| Sbjct: 69506 ataacgctgtcggggctgctcaactttattgatgggctgtggtc 69549 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 134 cacccggcctcgttcgaaacgctcgccatgga 165 |||||||| ||||||| |||||||||||||| Sbjct: 69140 cacccggcgacgttcgacacgctcgccatgga 69171
>ref|NM_197381.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0018B10.3), mRNA Length = 1599 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Plus Query: 258 gctacctgctctacggcccccctggcaccggcaagtcca 296 ||||||||||||||||||| | |||||||| ||||||| Sbjct: 725 gctacctgctctacggcccgtccggcaccgggaagtcca 763
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 46.1 bits (23), Expect = 0.14 Identities = 35/39 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtcca 296 ||||||||||||||||||| | |||||||| ||||||| Sbjct: 20951 gctacctgctctacggcccgtccggcaccgggaagtcca 20913
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 254 cgcggctacctgctctacggcccccctggca 284 |||||||||||||| ||||||||||| |||| Sbjct: 700911 cgcggctacctgctatacggccccccgggca 700881
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 ctctacggcccccctggcaccggcaag 292 |||||||||||||| |||||||||||| Sbjct: 12714 ctctacggcccccccggcaccggcaag 12740
>dbj|AK119628.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-128-A01, full insert sequence Length = 1545 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 ctctacggcccccctggcaccggcaag 292 |||||||||||||| |||||||||||| Sbjct: 534 ctctacggcccccccggcaccggcaag 560
>dbj|AK100047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154C19, full insert sequence Length = 1796 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 266 ctctacggcccccctggcaccggcaag 292 |||||||||||||| |||||||||||| Sbjct: 536 ctctacggcccccccggcaccggcaag 562
>ref|NM_208955.1| Eremothecium gossypii ACR200Cp (ACR200C), mRNA Length = 1335 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 254 cgcggctacctgctctacggcccccctggca 284 |||||||||||||| ||||||||||| |||| Sbjct: 748 cgcggctacctgctatacggccccccgggca 778
>gb|AF112964.1|AF112964 Triticum aestivum small GTP-binding protein (Sgp) mRNA, complete cds Length = 1136 Score = 46.1 bits (23), Expect = 0.14 Identities = 23/23 (100%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcctggt 303 ||||||||||||||||||||||| Sbjct: 331 ggcaccggcaagtccagcctggt 353
>ref|XM_368200.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01044.4) partial mRNA Length = 1905 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcctggtcgc 306 ||||||||||||||||||||| |||| Sbjct: 40 ggcaccggcaagtccagcctgatcgc 65
>ref|XM_425834.1| PREDICTED: Gallus gallus similar to for proteasomal ATPase (SUG1) (LOC428274), mRNA Length = 1236 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctgctctacggcccccctggcaccggcaag 292 ||||||||||| ||||||||||| |||||| Sbjct: 574 ctgctctacggaccccctggcactggcaag 603
>gb|AC093686.6| Homo sapiens BAC clone RP11-713A20 from 7, complete sequence Length = 189854 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 agtccagcctggtcgctgccat 312 |||||||||||||||||||||| Sbjct: 136197 agtccagcctggtcgctgccat 136176
>gb|AC093627.4| Homo sapiens BAC clone RP11-90P13 from 7, complete sequence Length = 179269 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 agtccagcctggtcgctgccat 312 |||||||||||||||||||||| Sbjct: 125648 agtccagcctggtcgctgccat 125627
>gb|AC093666.4| Homo sapiens BAC clone RP11-482G13 from 7, complete sequence Length = 157816 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 agtccagcctggtcgctgccat 312 |||||||||||||||||||||| Sbjct: 138251 agtccagcctggtcgctgccat 138230
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 ctgctctacggcccccctggcaccggcaag 292 |||||||||||||| || |||||||||||| Sbjct: 169977 ctgctctacggccctccgggcaccggcaag 169948
>dbj|AK024243.1| Homo sapiens cDNA FLJ14181 fis, clone NT2RP2004300 Length = 4411 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 agtccagcctggtcgctgccat 312 |||||||||||||||||||||| Sbjct: 364 agtccagcctggtcgctgccat 343
>dbj|AB120534.1| Nicotiana tabacum mRNA, transcriptionally up-regulated region associated with genomic hypomethylation, clone: O17 Length = 1085 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Minus Query: 263 ctgctctacggcccccctggcaccggcaag 292 |||||||||||||||||||| || |||||| Sbjct: 843 ctgctctacggcccccctggtactggcaag 814
>gb|AC093614.4| Homo sapiens PAC clone RP1-164D18 from 7, complete sequence Length = 72666 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 291 agtccagcctggtcgctgccat 312 |||||||||||||||||||||| Sbjct: 56536 agtccagcctggtcgctgccat 56515
>emb|CR386298.1| Gallus gallus finished cDNA, clone ChEST117k22 Length = 1317 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctgctctacggcccccctggcaccggcaag 292 ||||||||||| ||||||||||| |||||| Sbjct: 607 ctgctctacggaccccctggcactggcaag 636
>emb|BX950722.2| Gallus gallus finished cDNA, clone ChEST201g21 Length = 1367 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctgctctacggcccccctggcaccggcaag 292 ||||||||||| ||||||||||| |||||| Sbjct: 608 ctgctctacggaccccctggcactggcaag 637
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 263 ctgctctacggcccccctggcaccggcaag 292 |||||||||||||| || |||||||||||| Sbjct: 418316 ctgctctacggcccgcccggcaccggcaag 418345
>ref|NM_187543.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 258 gctacctgctctacggcccccctggcaccggcaagtc 294 ||||||| ||||||||||| | |||||||||||||| Sbjct: 698 gctacctcctctacggcccgctgggcaccggcaagtc 734
>gb|AC096997.3| Takifugu rubripes clone 217A23, complete sequence Length = 74841 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 396 acatgtccaacaagtccatcc 416 ||||||||||||||||||||| Sbjct: 19900 acatgtccaacaagtccatcc 19880
>emb|BX571859.1| Photorhabdus luminescens subsp. laumondii TTO1 complete genome; segment 1/17 Length = 349483 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 258 gctacctgctctacggccccc 278 ||||||||||||||||||||| Sbjct: 72317 gctacctgctctacggccccc 72297
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcctggtcgctgc 309 |||||||||||||| |||||| ||||||| Sbjct: 1377470 ggcaccggcaagtcgagcctgttcgctgc 1377498
>gb|AE011960.1| Xanthomonas axonopodis pv. citri str. 306, section 338 of 469 of the complete genome Length = 10347 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 281 ggcaccggcaagtccagcctggtcgctgc 309 |||||||||||||| |||||| ||||||| Sbjct: 10119 ggcaccggcaagtcgagcctgttcgctgc 10091
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Minus Query: 254 cgcggctacctgctctacggcccccctggcaccggcaagtc 294 |||||||||||| | |||||||| || ||||| |||||||| Sbjct: 1614475 cgcggctacctgttttacggcccacccggcacgggcaagtc 1614435
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 aggcatcaatcaccaccaccc 138 ||||||||||||||||||||| Sbjct: 2452878 aggcatcaatcaccaccaccc 2452898
>gb|AC154371.2| Mus musculus BAC clone RP23-102A13 from chromosome 14, complete sequence Length = 206234 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcctt 418 ||||||||||||||||||||| Sbjct: 201194 atgtccaacaagtccatcctt 201214
>gb|AC154832.2| Mus musculus BAC clone RP24-568D4 from chromosome 14, complete sequence Length = 134900 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcctt 418 ||||||||||||||||||||| Sbjct: 35375 atgtccaacaagtccatcctt 35395
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 258 gctacctgctctacggcccccctggcaccggcaagtc 294 ||||||| ||||||||||| | |||||||||||||| Sbjct: 87846 gctacctcctctacggcccgctgggcaccggcaagtc 87810
>dbj|AK110890.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-H07, full insert sequence Length = 1680 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Minus Query: 272 ggcccccctggcaccggcaagtccagcctggtcgctgccatggccaactacct 324 ||||| ||||| || |||||||||||| || | || ||||||||||| ||||| Sbjct: 1034 ggcccacctggaactggcaagtccagcttgattgcagccatggccaattacct 982
>dbj|AK108730.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-D02, full insert sequence Length = 1900 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 258 gctacctgctctacggcccccctggcaccggcaagtc 294 ||||||| ||||||||||| | |||||||||||||| Sbjct: 772 gctacctcctctacggcccgctgggcaccggcaagtc 808
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcctggtcgctgc 309 |||||||||||||| |||||| ||||||| Sbjct: 1401129 ggcaccggcaagtcgagcctgttcgctgc 1401157
>gb|AC126434.4| Mus musculus BAC clone RP24-574E7 from 7, complete sequence Length = 206087 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcctt 418 ||||||||||||||||||||| Sbjct: 139316 atgtccaacaagtccatcctt 139296
>gb|AC152956.1| Mus musculus 6 BAC RP23-261F17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177077 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 20887 atgtccaacaagtccatcct 20906
>gb|AC124427.5| Mus musculus BAC clone RP24-232N5 from chromosome 8, complete sequence Length = 205525 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 151493 tccagggctgaagcaggctg 151512
>gb|AC121261.9| Mus musculus chromosome 7, clone RP24-69L13, complete sequence Length = 163319 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 11382 atgtccaacaagtccatcct 11363
>gb|AC163281.3| Mus musculus BAC clone RP23-443B19 from chromosome 8, complete sequence Length = 197609 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 139070 atgtccaacaagtccatcct 139051
>gb|AC154202.2| Mus musculus BAC clone RP24-386E14 from chromosome 14, complete sequence Length = 147957 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 104013 atgtccaacaagtccatcct 104032
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 269 tacggcccccctggcaccggcaag 292 ||||||||||| |||||||||||| Sbjct: 813136 tacggcccccccggcaccggcaag 813159
>ref|NM_191760.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 792 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ctggacgacctcgaccggttcctgaaga 215 ||||||||||||| | |||||||||||| Sbjct: 601 ctggacgacctcgtcgggttcctgaaga 628
>ref|NM_186361.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tggaggacgaggacgacggc 502 |||||||||||||||||||| Sbjct: 191 tggaggacgaggacgacggc 210
>gb|BT018890.1| Zea mays clone EL01T0206A05.d mRNA sequence Length = 2383 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 ggcaccggcaagtccagcct 300 |||||||||||||||||||| Sbjct: 129 ggcaccggcaagtccagcct 148
>gb|AY022419.1| Oryza sativa microsatellite MRG4744 containing (ACC)X9, closest to marker L585, genomic sequence Length = 227 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tggaggacgaggacgacggc 502 |||||||||||||||||||| Sbjct: 45 tggaggacgaggacgacggc 64
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 tgctctacggcccccctggcaccggcaa 291 ||||||||||||| || ||||||||||| Sbjct: 430640 tgctctacggcccacccggcaccggcaa 430613
>gb|AC073906.6| Trypanosoma brucei chromosome 6 clone RPCI93-3A7, complete sequence Length = 175357 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 264 tgctctacggcccccctggcaccggcaa 291 ||||||||||||| || ||||||||||| Sbjct: 82456 tgctctacggcccacccggcaccggcaa 82429
>gb|AC151601.5| Mus musculus BAC clone RP23-241H10 from chromosome 7, complete sequence Length = 187463 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 125847 atgtccaacaagtccatcct 125866
>gb|AC120559.10| Mus musculus chromosome 9, clone RP24-566A4, complete sequence Length = 141300 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 97587 atgtccaacaagtccatcct 97568
>gb|AC146521.2| Oryza sativa chromosome 3 B1246D11 genomic sequence, complete sequence Length = 43277 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 482 ttggaggacgaggacgacgg 501 |||||||||||||||||||| Sbjct: 30755 ttggaggacgaggacgacgg 30774
>gb|AC124597.5| Mus musculus BAC clone RP23-21K1 from chromosome 6, complete sequence Length = 185242 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 74861 atgtccaacaagtccatcct 74842
>gb|AC147835.2| Xenopus tropicalis clone CH216-24N20, complete sequence Length = 164328 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 atccagggctgaagcaggct 184 |||||||||||||||||||| Sbjct: 149616 atccagggctgaagcaggct 149635
>gb|AC162164.7| Mus musculus chromosome 7, clone RP23-308C18, complete sequence Length = 187253 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 127304 atgtccaacaagtccatcct 127285
>gb|AC140460.3| Mus musculus BAC clone RP24-151D4 from chromosome 9, complete sequence Length = 196545 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 77359 atgtccaacaagtccatcct 77378
>ref|XM_656688.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4176.2), mRNA Length = 1707 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 tggaggacgaggacgacggc 502 |||||||||||||||||||| Sbjct: 638 tggaggacgaggacgacggc 657
>gb|AC125268.10| Mus musculus chromosome 1, clone RP23-127L7, complete sequence Length = 233529 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 73977 atgtccaacaagtccatcct 73996
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 264 tgctctacggcccccctggcaccggcaagtcc 295 |||||||||||||||| ||||| || |||||| Sbjct: 1083700 tgctctacggccccccgggcacgggtaagtcc 1083731
>gb|AC158932.5| Mus musculus chromosome 3, clone RP24-338G13, complete sequence Length = 159429 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 74302 atgtccaacaagtccatcct 74321
>gb|AC162894.4| Mus musculus chromosome 3, clone RP23-326A24, complete sequence Length = 187598 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 115917 atgtccaacaagtccatcct 115936
>gb|AC107798.10| Mus musculus chromosome 8, clone RP23-4D24, complete sequence Length = 234420 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 202983 atgtccaacaagtccatcct 202964
>gb|AY377800.1| Heliotropium elongatum isolate 966 internal transcribed spacer 1, partial sequence Length = 260 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 325 acgtttcaatctctacgacctcga 348 ||||||||||||||||| |||||| Sbjct: 36 acgtttcaatctctacggcctcga 59
>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete sequence Length = 173736 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 27073 atgtccaacaagtccatcct 27092
>ref|XM_842822.1| Leishmania major strain Friedlin serine peptidase, Clan SJ, family S16 (LMJ_0893) partial mRNA Length = 1338 Score = 40.1 bits (20), Expect = 8.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 264 tgctctacggcccccctggcaccggcaagtcc 295 |||||||||||||||| ||||| || |||||| Sbjct: 500 tgctctacggccccccgggcacgggtaagtcc 531
>ref|XM_821194.1| Trypanosoma brucei TREU927 clone RPCI93-3A7 proteasome regulatory ATPase subunit 3 (Tb927.6.1090) partial mRNA Length = 1212 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 264 tgctctacggcccccctggcaccggcaa 291 ||||||||||||| || ||||||||||| Sbjct: 560 tgctctacggcccacccggcaccggcaa 587
>gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome 5, complete sequence Length = 177052 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 139814 atgtccaacaagtccatcct 139795
>gb|AC124201.4| Mus musculus BAC clone RP23-329B24 from chromosome 8, complete sequence Length = 234158 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 40868 atgtccaacaagtccatcct 40849
>gb|AC115797.16| Mus musculus chromosome 17, clone RP23-405J10, complete sequence Length = 193909 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 28258 atgtccaacaagtccatcct 28239
>gb|AC108951.4| Mus musculus BAC clone RP24-136D23 from 3, complete sequence Length = 148219 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 21276 atgtccaacaagtccatcct 21295
>gb|AC107859.7| Mus musculus chromosome 15, clone RP23-19C9, complete sequence Length = 208355 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 187506 atgtccaacaagtccatcct 187487
>gb|AC134392.5| Mus musculus chromosome 16, clone RP24-346N12, complete sequence Length = 170666 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 147699 atgtccaacaagtccatcct 147718
>gb|AC125474.16| Medicago truncatula clone mth2-16l11, complete sequence Length = 127369 Score = 40.1 bits (20), Expect = 8.4 Identities = 68/84 (80%) Strand = Plus / Minus Query: 238 cgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtccag 297 |||||| |||||||||||||| ||| || | || ||||| ||||| || || ||||| || Sbjct: 106064 cgggaaagcttggaaacgcggttacttgttgtatggccctcctggtactggaaagtctag 106005 Query: 298 cctggtcgctgccatggccaacta 321 | || | || |||||||| ||||| Sbjct: 106004 cttgattgcagccatggctaacta 105981
>gb|AC152352.12| Medicago truncatula clone mth2-77a17, complete sequence Length = 110029 Score = 40.1 bits (20), Expect = 8.4 Identities = 68/84 (80%) Strand = Plus / Plus Query: 238 cgggaaggcttggaaacgcggctacctgctctacggcccccctggcaccggcaagtccag 297 |||||| |||||||||||||| ||| || | || ||||| ||||| || || ||||| || Sbjct: 89540 cgggaaagcttggaaacgcggttacttgttgtatggccctcctggtactggaaagtctag 89599 Query: 298 cctggtcgctgccatggccaacta 321 | || | || |||||||| ||||| Sbjct: 89600 cttgattgcagccatggctaacta 89623
>gb|AC144376.3| Pan troglodytes BAC clone RP43-53D10 from Y, complete sequence Length = 212954 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 22411 tccagggctgaagcaggctg 22430
>gb|AC157100.10| Mus musculus 6 BAC RP24-459E13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 192228 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 123682 atgtccaacaagtccatcct 123663
>gb|AC157577.6| Mus musculus chromosome 1, clone RP24-145K21, complete sequence Length = 169199 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 158083 atgtccaacaagtccatcct 158064
>emb|AL021837.2|SPBC947 S.pombe chromosome II cosmid c947 Length = 42934 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 ggcccccctggcaccggcaa 291 |||||||||||||||||||| Sbjct: 40919 ggcccccctggcaccggcaa 40900
>emb|AL691518.9| Mouse DNA sequence from clone RP23-267K1 on chromosome 11 Contains a CpG island, complete sequence Length = 114102 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 92647 atgtccaacaagtccatcct 92666
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 133818 atgtccaacaagtccatcct 133799
>emb|BX323809.14| Zebrafish DNA sequence from clone DKEY-42J10 in linkage group 10, complete sequence Length = 194108 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 tcctgaagaggaaagagtac 226 |||||||||||||||||||| Sbjct: 107883 tcctgaagaggaaagagtac 107864
>dbj|BS000541.1| Pan troglodytes chromosome Y clone:PTB-180G05, complete sequences Length = 151329 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 128020 tccagggctgaagcaggctg 128001
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 2182483 tccagggctgaagcaggctg 2182502 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 1866858 tccagggctgaagcaggctg 1866839
>gb|AC087116.13| Mus Musculus Strain C57BL6/J Chromosome 15~RP23-336B1, complete sequence Length = 218476 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 35827 atgtccaacaagtccatcct 35808
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 acgaggacgacggccgagac 508 |||||||||||||||||||| Sbjct: 2772134 acgaggacgacggccgagac 2772153
>gb|AF227501.1| Trypanosoma brucei proteasome regulatory ATPase subunit 3 (Rpt3) gene, complete cds Length = 1789 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 264 tgctctacggcccccctggcaccggcaa 291 ||||||||||||| || ||||||||||| Sbjct: 953 tgctctacggcccacccggcaccggcaa 980
>gb|AC159213.3| Pan troglodytes BAC clone CH251-624P14 from chromosome y, complete sequence Length = 192983 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 tccagggctgaagcaggctg 185 |||||||||||||||||||| Sbjct: 34174 tccagggctgaagcaggctg 34193
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 81173 atgtccaacaagtccatcct 81192
>gb|AC126687.3| Mus musculus BAC clone RP23-149L23 from chromosome 12, complete sequence Length = 186742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 72211 atgtccaacaagtccatcct 72230
>gb|AC153659.4| Mus musculus BAC clone RP23-283A3 from chromosome 3, complete sequence Length = 220855 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 114535 atgtccaacaagtccatcct 114554
>ref|NM_001021182.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC947.01), partial mRNA Length = 1983 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 ggcccccctggcaccggcaa 291 |||||||||||||||||||| Sbjct: 1255 ggcccccctggcaccggcaa 1274
>gb|AC101790.5| Mus musculus chromosome 8, clone RP24-163M14, complete sequence Length = 202651 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 102436 atgtccaacaagtccatcct 102455
>gb|AC154308.3| Mus musculus BAC clone RP23-370E2 from chromosome 16, complete sequence Length = 202348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 8590 atgtccaacaagtccatcct 8609
>dbj|AP003288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0683B11 Length = 155955 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ctggacgacctcgaccggttcctgaaga 215 ||||||||||||| | |||||||||||| Sbjct: 58872 ctggacgacctcgtcgggttcctgaaga 58899
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.4 Identities = 32/36 (88%) Strand = Plus / Plus Query: 257 ggctacctgctctacggcccccctggcaccggcaag 292 ||||||||||||||||||| || ||| |||||||| Sbjct: 4114238 ggctacctgctctacggccggcccggcgccggcaag 4114273
>dbj|AP003866.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1092_A07 Length = 137081 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tggaggacgaggacgacggc 502 |||||||||||||||||||| Sbjct: 63918 tggaggacgaggacgacggc 63899
>emb|AL731647.13| Mouse DNA sequence from clone RP23-226L1 on chromosome X, complete sequence Length = 185319 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 64412 atgtccaacaagtccatcct 64431
>dbj|AK101454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040A11, full insert sequence Length = 1048 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 188 ctggacgacctcgaccggttcctgaaga 215 ||||||||||||| | |||||||||||| Sbjct: 670 ctggacgacctcgtcgggttcctgaaga 697
>gb|AC154699.2| Mus musculus BAC clone RP24-344D19 from 9, complete sequence Length = 150348 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 19756 atgtccaacaagtccatcct 19737
>gb|AC154386.2| Mus musculus BAC clone RP23-27A13 from 13, complete sequence Length = 170110 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 11789 atgtccaacaagtccatcct 11808
>gb|AC108832.10| Mus musculus chromosome 7, clone RP23-242J3, complete sequence Length = 185083 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 28863 atgtccaacaagtccatcct 28882
>gb|AY107131.1| Zea mays PCO080814 mRNA sequence Length = 559 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 285 ccggcaagtccagcctggtc 304 |||||||||||||||||||| Sbjct: 233 ccggcaagtccagcctggtc 252
>gb|AC113498.9| Mus musculus chromosome 1, clone RP23-366N18, complete sequence Length = 206252 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 139203 atgtccaacaagtccatcct 139222
>gb|AC162941.5| Mus musculus BAC clone RP23-78N5 from chromosome 9, complete sequence Length = 230344 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 150244 atgtccaacaagtccatcct 150225
>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence Length = 169072 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 162233 atgtccaacaagtccatcct 162252
>emb|CT033754.8| Mouse DNA sequence from clone RP23-174E11 on chromosome 9, complete sequence Length = 165339 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 76544 atgtccaacaagtccatcct 76563
>emb|AL845267.2| Mouse DNA sequence from clone RP23-426D2 on chromosome 2, complete sequence Length = 216597 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 92612 atgtccaacaagtccatcct 92593
>emb|CT009720.16| Mouse DNA sequence from clone RP23-21J17 on chromosome 9, complete sequence Length = 216098 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 114668 atgtccaacaagtccatcct 114687
>emb|CT030714.5| Mouse DNA sequence from clone RP23-223P19 on chromosome 13, complete sequence Length = 176581 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 101515 atgtccaacaagtccatcct 101496
>emb|AL840627.7| Zebrafish DNA sequence from clone CH211-278B16 in linkage group 17, complete sequence Length = 164375 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 441 gtttcgacacgatgtcgaga 460 |||||||||||||||||||| Sbjct: 5010 gtttcgacacgatgtcgaga 4991
>gb|AC120551.5| Mus musculus chromosome 1, clone RP24-338A22, complete sequence Length = 161994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 75565 atgtccaacaagtccatcct 75546 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 2218 atgtccaacaagtccatcct 2199
>emb|AL928638.7| Mouse DNA sequence from clone RP23-377E1 on chromosome 2, complete sequence Length = 128608 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 66402 atgtccaacaagtccatcct 66421
>emb|AL845442.7| Mouse DNA sequence from clone RP23-392D9 on chromosome 2, complete sequence Length = 192013 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 114303 atgtccaacaagtccatcct 114284
>emb|AL844223.9| Mouse DNA sequence from clone RP23-468N9 on chromosome 4, complete sequence Length = 61897 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 27014 atgtccaacaagtccatcct 26995
>emb|AL833780.6| Mouse DNA sequence from clone RP23-24M22 on chromosome 2, complete sequence Length = 194630 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 398 atgtccaacaagtccatcct 417 |||||||||||||||||||| Sbjct: 86854 atgtccaacaagtccatcct 86873 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,947,958 Number of Sequences: 3902068 Number of extensions: 3947958 Number of successful extensions: 79230 Number of sequences better than 10.0: 187 Number of HSP's better than 10.0 without gapping: 206 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 77262 Number of HSP's gapped (non-prelim): 1961 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
