ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bags9a06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000223.1| Drosophila melanogaster genomic scaffold 21100002... 44 0.59
2gb|AC146560.21| Medicago truncatula clone mth2-12g6, complete se... 42 2.3
3gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com... 42 2.3
4gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, com... 42 2.3
5gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete se... 42 2.3
6gb|AC012510.8| Homo sapiens BAC clone RP11-548H3 from 2, complet... 42 2.3
7gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, com... 42 2.3
8gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chr... 42 2.3
9gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete se... 42 2.3
10gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, com... 42 2.3
11gb|AC097503.2| Homo sapiens BAC clone RP11-356P4 from 2, complet... 42 2.3
12dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01,... 42 2.3
13gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. F... 42 2.3
14gb|AE016830.1| Enterococcus faecalis V583, complete genome 42 2.3
15emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chr... 42 2.3
16gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosom... 40 9.2
17gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, com... 40 9.2
18gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosom... 40 9.2
19gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, co... 40 9.2
20gb|AC095032.3| Homo sapiens chromosome 1 clone RP11-153F1, compl... 40 9.2
21gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome... 40 9.2
22gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete se... 40 9.2
23emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in... 40 9.2
24emb|BX649201.1| Human DNA sequence from clone RP11-347K2 on chro... 40 9.2
25emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chro... 40 9.2
26emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H2... 40 9.2
27emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chrom... 40 9.2
28emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chro... 40 9.2
29dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 9.2
30gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswel... 40 9.2
31gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell... 40 9.2
32gb|AC024258.9| Homo sapiens chromosome 10 clone RP11-297N15, com... 40 9.2
33gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, comple... 40 9.2
34gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, comp... 40 9.2
35gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell... 40 9.2
36gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 40 9.2
37gb|AC005476.4|AC005476 Homo sapiens PAC clone RP1-261D10 from 14... 40 9.2
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
39gb|AC025281.8| Homo sapiens chromosome 16 clone RP11-356O24, com... 40 9.2
40emb|BX005235.8| Zebrafish DNA sequence from clone DKEY-68L7 in l... 40 9.2
41dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21,... 40 9.2
42dbj|AK073678.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
43gb|AC102279.18| Mus musculus chromosome 7, clone RP24-302P2, com... 40 9.2
44gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45... 40 9.2
45dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.2
46dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 9.2
47dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 9.2
48emb|BX284680.6| Mouse DNA sequence from clone RP23-260E20 on chr... 40 9.2
49gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
50emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058... 40 9.2
51emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chr... 40 9.2
52dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 9.2
53emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chro... 40 9.2 
>gb|CP000223.1| Drosophila melanogaster genomic scaffold 211000022280790
          Length = 626829

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 569    agatgctgatagatatatgctg 590
              ||||||||||||||||||||||
Sbjct: 553823 agatgctgatagatatatgctg 553844
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>gb|AC146560.21| Medicago truncatula clone mth2-12g6, complete sequence
          Length = 127820

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 186   gtatttttctcgtgatccatc 206
             |||||||||||||||||||||
Sbjct: 54788 gtatttttctcgtgatccatc 54808
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>gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, complete sequence
          Length = 152722

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 610    aaatgtttatatgaagaaaaagatg 634
              |||||||||| ||||||||||||||
Sbjct: 126778 aaatgtttatttgaagaaaaagatg 126754
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>gb|AC044784.11| Homo sapiens chromosome 10 clone RP11-428L9, complete sequence
          Length = 179711

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 627   aaaagatgtttcagtgaaaatattt 651
             ||||||||||||| |||||||||||
Sbjct: 30269 aaaagatgtttcactgaaaatattt 30293
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>gb|AC140035.9| Medicago truncatula clone mth2-25n18, complete sequence
          Length = 120870

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 610   aaatgtttatatgaagaaaaa 630
             |||||||||||||||||||||
Sbjct: 86899 aaatgtttatatgaagaaaaa 86879
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>gb|AC012510.8| Homo sapiens BAC clone RP11-548H3 from 2, complete sequence
          Length = 107017

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   gcttggatttctggagaaggt 346
             |||||||||||||||||||||
Sbjct: 80731 gcttggatttctggagaaggt 80711
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>gb|AC009051.8| Homo sapiens chromosome 16 clone RP11-238M18, complete sequence
          Length = 157691

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 218   tgcttcaagatgatggaggggccat 242
             ||||||||||||| |||||||||||
Sbjct: 25406 tgcttcaagatgaaggaggggccat 25382
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>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete
               sequence
          Length = 4332241

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 491     agaagattggaattcgtgagg 511
               |||||||||||||||||||||
Sbjct: 3761064 agaagattggaattcgtgagg 3761044
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>gb|AC011095.5|AC011095 Homo sapiens, clone RP11-1O2, complete sequence
          Length = 157051

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 610  aaatgtttatatgaagaaaaagatg 634
            |||||||||| ||||||||||||||
Sbjct: 4213 aaatgtttatttgaagaaaaagatg 4189
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>gb|AC136285.2| Homo sapiens chromosome 16 clone RP11-899L11, complete sequence
          Length = 235286

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 218    tgcttcaagatgatggaggggccat 242
              ||||||||||||| |||||||||||
Sbjct: 122209 tgcttcaagatgaaggaggggccat 122185
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>gb|AC097503.2| Homo sapiens BAC clone RP11-356P4 from 2, complete sequence
          Length = 88520

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 126   gataagtcatggtatggtggctcat 150
             ||||||||| |||||||||||||||
Sbjct: 38366 gataagtcagggtatggtggctcat 38342
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>dbj|BS000135.1| Pan troglodytes chromosome 22 clone:RP43-114M01, map 22, complete
             sequences
          Length = 73133

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 584   tatgctgggatcattttcatc 604
             |||||||||||||||||||||
Sbjct: 27145 tatgctgggatcattttcatc 27125
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>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130,
              chromosome I, complete sequence
          Length = 4277185

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 491    agaagattggaattcgtgagg 511
              |||||||||||||||||||||
Sbjct: 512929 agaagattggaattcgtgagg 512949
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 638     cagtgaaaatatttgatgcta 658
               |||||||||||||||||||||
Sbjct: 1246446 cagtgaaaatatttgatgcta 1246466
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>emb|AL772403.11| Mouse DNA sequence from clone RP23-458E2 on chromosome 4, complete
             sequence
          Length = 108612

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 556   attgagttggagcagatgctg 576
             |||||||||||||||||||||
Sbjct: 86712 attgagttggagcagatgctg 86692
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>gb|AC164095.4| Mus musculus BAC clone RP23-355A22 from chromosome 7, complete sequence
          Length = 184356

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 553   acaattgagttggagcagatgctg 576
             |||||||| |||||||||||||||
Sbjct: 59830 acaattgaattggagcagatgctg 59807
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>gb|AC103399.9| Mus musculus chromosome 3, clone RP23-310N18, complete sequence
          Length = 154918

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 633    tgtttcagtgaaaatatttg 652
              ||||||||||||||||||||
Sbjct: 129269 tgtttcagtgaaaatatttg 129250
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>gb|AC140783.4| Mus musculus BAC clone RP24-253K16 from chromosome 15, complete
             sequence
          Length = 165903

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   aaggaaaatgtttatatgaa 624
             ||||||||||||||||||||
Sbjct: 92688 aaggaaaatgtttatatgaa 92669
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>gb|AC137905.8| Mus musculus chromosome 15, clone RP23-334B11, complete sequence
          Length = 210548

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 605   aaggaaaatgtttatatgaa 624
             ||||||||||||||||||||
Sbjct: 55145 aaggaaaatgtttatatgaa 55126
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>gb|AC095032.3| Homo sapiens chromosome 1 clone RP11-153F1, complete sequence
          Length = 157344

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 626   aaaaagatgtttcagtgaaa 645
             ||||||||||||||||||||
Sbjct: 17925 aaaaagatgtttcagtgaaa 17906
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>gb|AC122359.5| Mus musculus BAC clone RP23-421B1 from chromosome 6, complete sequence
          Length = 194338

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 612    atgtttatatgaagaaaaag 631
              ||||||||||||||||||||
Sbjct: 161529 atgtttatatgaagaaaaag 161548
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>gb|AC146775.8| Medicago truncatula clone mth2-95g14, complete sequence
          Length = 139593

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 182   atatgtatttttctcgtgatccat 205
             |||||||||||||| |||||||||
Sbjct: 61703 atatgtatttttctagtgatccat 61726
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>emb|CR513784.8| Zebrafish DNA sequence from clone CH211-286B4 in linkage group 15,
              complete sequence
          Length = 166308

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    atgactcgtgatcataacat 443
              ||||||||||||||||||||
Sbjct: 130831 atgactcgtgatcataacat 130812
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>emb|BX649201.1| Human DNA sequence from clone RP11-347K2 on chromosome 1 Contains two
             novel genes, complete sequence
          Length = 100266

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 626   aaaaagatgtttcagtgaaa 645
             ||||||||||||||||||||
Sbjct: 28458 aaaaagatgtttcagtgaaa 28439
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>emb|AL512782.6| Human DNA sequence from clone RP11-464I4 on chromosome 13, complete
              sequence
          Length = 186266

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 27/28 (96%), Gaps = 1/28 (3%)
 Strand = Plus / Minus

                                          
Query: 545    tttctacaacaattgagttggagcagat 572
              ||||||||| ||||||||||||||||||
Sbjct: 148641 tttctacaa-aattgagttggagcagat 148615
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>emb|AL031680.20|HS850H21 Human DNA sequence from clone RP5-850H21 on chromosome 20q13.11-13.2
             Contains the 5' end of the BCAS4 gene for breast carcinoma
             amplified sequence 4, the PARD6B gene for par-6
             partitioning defective 6 homolog beta (C. elegans) and two
             CpG islands, complete sequence
          Length = 117431

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 613   tgtttatatgaagaaaaaga 632
             ||||||||||||||||||||
Sbjct: 16821 tgtttatatgaagaaaaaga 16802
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>emb|AL929356.1|PFA929356 Plasmodium falciparum strain 3D7, chromosome 9; segment 2/5
          Length = 335050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 605    aaggaaaatgtttatatgaagaaa 628
              |||||||| |||||||||||||||
Sbjct: 175889 aaggaaaaagtttatatgaagaaa 175912
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>emb|AL604031.10| Mouse DNA sequence from clone RP23-24O5 on chromosome 11 Contains a
             ribosomal protein L13 (Rpl13) pseudogene, a novel gene and
             two CpG islands, complete sequence
          Length = 215675

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 621   tgaagaaaaagatgtttcag 640
             ||||||||||||||||||||
Sbjct: 73032 tgaagaaaaagatgtttcag 73051
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>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171
             region, complete sequence
          Length = 130626

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   atgctgggatcattttcatc 604
             ||||||||||||||||||||
Sbjct: 96412 atgctgggatcattttcatc 96393
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>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 158719

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 595   cattttcatcaaggaaaatgttta 618
             |||||||||| |||||||||||||
Sbjct: 21383 cattttcatcgaggaaaatgttta 21406
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>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163711

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 595   cattttcatcaaggaaaatgttta 618
             |||||||||| |||||||||||||
Sbjct: 54307 cattttcatcgaggaaaatgttta 54330
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>gb|AC024258.9| Homo sapiens chromosome 10 clone RP11-297N15, complete sequence
          Length = 160658

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 609   aaaatgtttatatgaagaaa 628
             ||||||||||||||||||||
Sbjct: 44070 aaaatgtttatatgaagaaa 44089
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>gb|AC079795.6| Homo sapiens BAC clone RP11-610P16 from 4, complete sequence
          Length = 110185

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 398   atttagatcctatctgtatt 417
             ||||||||||||||||||||
Sbjct: 64091 atttagatcctatctgtatt 64110
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>gb|AC096643.2| Homo sapiens chromosome 1 clone RP11-408A22, complete sequence
          Length = 163962

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      cattatgaatttgctctcta 20
              ||||||||||||||||||||
Sbjct: 119834 cattatgaatttgctctcta 119815
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>gb|AC091223.2| Drosophila melanogaster 3L BAC RP98-48G6 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 170988

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 595    cattttcatcaaggaaaatgttta 618
              |||||||||| |||||||||||||
Sbjct: 167857 cattttcatcgaggaaaatgttta 167880
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 610     aaatgtttatatgaagaaaa 629
               ||||||||||||||||||||
Sbjct: 1025510 aaatgtttatatgaagaaaa 1025529
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>gb|AC005476.4|AC005476 Homo sapiens PAC clone RP1-261D10 from 14q24.3, complete sequence
          Length = 107731

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 396   acatttagatcctatctgta 415
             ||||||||||||||||||||
Sbjct: 98466 acatttagatcctatctgta 98485
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 632      atgtttcagtgaaaatattt 651
                ||||||||||||||||||||
Sbjct: 24362154 atgtttcagtgaaaatattt 24362173
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>gb|AC025281.8| Homo sapiens chromosome 16 clone RP11-356O24, complete sequence
          Length = 193261

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 640   gtgaaaatatttgatgctat 659
             ||||||||||||||||||||
Sbjct: 27074 gtgaaaatatttgatgctat 27055
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>emb|BX005235.8| Zebrafish DNA sequence from clone DKEY-68L7 in linkage group 23, complete
              sequence
          Length = 141636

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 254    aagggaaggtggtgggtcta 273
              ||||||||||||||||||||
Sbjct: 140046 aagggaaggtggtgggtcta 140065
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>dbj|BS000068.1| Pan troglodytes chromosome 22 clone:RP43-046F21, map 22, complete
              sequences
          Length = 163689

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 628    aaagatgtttcagtgaaaat 647
              ||||||||||||||||||||
Sbjct: 135583 aaagatgtttcagtgaaaat 135602
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>dbj|AK073678.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033050J03, full
            insert sequence
          Length = 1498

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 632  atgtttcagtgaaaatattt 651
            ||||||||||||||||||||
Sbjct: 1350 atgtttcagtgaaaatattt 1331
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>gb|AC102279.18| Mus musculus chromosome 7, clone RP24-302P2, complete sequence
          Length = 170100

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 553    acaattgagttggagcagatgctg 576
              |||||||| |||||||||||||||
Sbjct: 117425 acaattgaattggagcagatgctg 117402
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>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete
             sequence
          Length = 297381

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 595   cattttcatcaaggaaaatgttta 618
             |||||||||| |||||||||||||
Sbjct: 22533 cattttcatcgaggaaaatgttta 22556
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 585   atgctgggatcattttcatc 604
             ||||||||||||||||||||
Sbjct: 72565 atgctgggatcattttcatc 72546
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>dbj|AP001681.1| Homo sapiens genomic DNA, chromosome 21q, section 25/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 628    aaagatgtttcagtgaaaat 647
              ||||||||||||||||||||
Sbjct: 108907 aaagatgtttcagtgaaaat 108926
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>dbj|AP001252.2| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-636L7, complete
             sequence
          Length = 91242

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 628   aaagatgtttcagtgaaaat 647
             ||||||||||||||||||||
Sbjct: 63995 aaagatgtttcagtgaaaat 64014
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>emb|BX284680.6| Mouse DNA sequence from clone RP23-260E20 on chromosome X, complete
             sequence
          Length = 168173

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 553   acaattgagttggagcagatgctg 576
             |||||||| |||||||||||||||
Sbjct: 97467 acaattgaattggagcagatgctg 97444
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 632      atgtttcagtgaaaatattt 651
                ||||||||||||||||||||
Sbjct: 24290360 atgtttcagtgaaaatattt 24290379
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>emb|AL772423.4|CNS08CA1 Oryza sativa chromosome 12, . BAC OJ1058_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 103803

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 632   atgtttcagtgaaaatattt 651
             ||||||||||||||||||||
Sbjct: 25686 atgtttcagtgaaaatattt 25705
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>emb|AL732625.8| Mouse DNA sequence from clone RP23-169H17 on chromosome 2, complete
             sequence
          Length = 224038

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    ctgcttacttttactgagcgtgtg 72
             |||||||||||||||||| |||||
Sbjct: 36176 ctgcttacttttactgagtgtgtg 36153
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>dbj|AP001626.1| Homo sapiens genomic DNA, chromosome 21, clone:KB1559F8, MX1-D21S171
            region, complete sequence
          Length = 145762

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 585  atgctgggatcattttcatc 604
            ||||||||||||||||||||
Sbjct: 5651 atgctgggatcattttcatc 5632
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>emb|AL805895.4| Mouse DNA sequence from clone RP23-64K11 on chromosome 4, complete
             sequence
          Length = 154245

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   cctatctgtattgagagaat 425
             ||||||||||||||||||||
Sbjct: 62207 cctatctgtattgagagaat 62188


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,946,279
Number of Sequences: 3902068
Number of extensions: 6946279
Number of successful extensions: 135583
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 135252
Number of HSP's gapped (non-prelim): 332
length of query: 671
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 648
effective length of database: 17,143,297,704
effective search space: 11108856912192
effective search space used: 11108856912192
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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