ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdp22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB085819.1| Hordeum vulgare HvEMF2c mRNA, complete cds 928 0.0
2gb|BT009056.1| Triticum aestivum clone wdr1f.pk001.o16:fis, full... 488 e-135
3dbj|AB085818.1| Hordeum vulgare HvEMF2b mRNA, complete cds 190 3e-45
4gb|AY887064.1| Triticum aestivum embryonic flower 2 mRNA, comple... 165 2e-37
5gb|BT008997.1| Triticum aestivum clone wdk2c.pk013.f22:fis, full... 147 4e-32
6dbj|AK100856.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
7gb|AY232824.1| Zea mays VEF family protein (vef101) mRNA, comple... 52 0.002
8gb|AY898650.1| Zea mays cultivar luyu 14 embryonic flower 2 mRNA... 52 0.002
9gb|DQ343238.1| Zea mays cultivar CML288 EMF-like mRNA, complete cds 52 0.002
10dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
12emb|CR703753.2|CNS0G5YT Tetraodon nigroviridis full-length cDNA 44 0.44
13emb|CR702914.2|CNS0G5BI Tetraodon nigroviridis full-length cDNA 44 0.44
14dbj|AB085817.1| Hordeum vulgare HvEMF2a mRNA, complete cds 44 0.44
15dbj|AK065329.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
16gb|AC040168.8| Homo sapiens chromosome 16 clone RP11-461O7, comp... 42 1.7
17gb|AC007495.9| Homo sapiens chromosome 16 clone RP11-355E10, com... 42 1.7
18dbj|AB035350.1| Oryza sativa (japonica cultivar-group) DNA, homo... 42 1.7
19gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete... 40 6.8
20ref|XM_324227.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.8
21ref|XM_954035.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.8
22gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, compl... 40 6.8
23gb|AC142086.3| Homo sapiens chromosome 16 clone RP11-989E6, comp... 40 6.8
24gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, co... 40 6.8
25emb|AL109660.14|HSJ666F24 Human DNA sequence from clone RP4-666F... 40 6.8
26emb|BX045959.1|CNS097MJ Single read from an extremity of a full-... 40 6.8
27gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, co... 40 6.8
28gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.8
29gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chrom... 40 6.8
30dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 40 6.8
31gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, com... 40 6.8
32gb|AC099036.1| Drosophila melanogaster, chromosome 2R, region 59... 40 6.8
33dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
34gb|AC010539.9| Homo sapiens chromosome 16 clone RP11-373A21, com... 40 6.8
35gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, com... 40 6.8
36gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, comp... 40 6.8
37gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, co... 40 6.8
38dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
39dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
40gb|AC006935.2|AC006935 Drosophila melanogaster, chromosome 2R, r... 40 6.8
41gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68... 40 6.8
42gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 40 6.8
43gb|AC146366.3| Dasypus novemcinctus clone VMRC5-468M8, complete ... 40 6.8 
>dbj|AB085819.1| Hordeum vulgare HvEMF2c mRNA, complete cds
          Length = 2492

 Score =  928 bits (468), Expect = 0.0
 Identities = 490/498 (98%), Gaps = 6/498 (1%)
 Strand = Plus / Plus

                                                                       
Query: 13  cgaagccgaaatccctaacgccggcgccggcgcccttgtccgttcaccatcgcgcgcccg 72
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21  cgaagccaaaatccctaacgccggcgccggcgcccttgtccgttcaccatcgcgcgcccg 80

                                                                       
Query: 73  tcccatagcttggatttcgatttcgatttagggcaagg------gcaagggcagaccaca 126
           ||||||||||||||||||||||||||||||||||||||      ||||||||||||||||
Sbjct: 81  tcccatagcttggatttcgatttcgatttagggcaagggcaagggcaagggcagaccaca 140

                                                                       
Query: 127 tgtgccgncaaccgtccacgcctgacttgtctccagatgagcagcttgctgccgaagaaa 186
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tgtgccgtcaaccgtccacgcctgacttgtctccagatgagcagcttgctgccgaagaaa 200

                                                                       
Query: 187 ccttcaagttgtactgcaagccagttgagctctgcaatgttattcaaaaacgagcccttg 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccttcaagttgtactgcaagccagttgagctctgcaatgttattcaaaaacgagcccttg 260

                                                                       
Query: 247 ataatcccgctttcctgcaaagatgccttcattacatgatacaggcaagccgtaaaaaga 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataatcccgctttcctgcaaagatgccttcattacatgatacaggcaagccgtaaaaaga 320

                                                                       
Query: 307 ggattcaactaaccgtatccctttctcgaggtatcgaatgcccagaccagaatatcttcc 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggattcaactaaccgtatccctttctcgaggtatcgaatgcccagaccagaatatcttcc 380

                                                                       
Query: 367 ccctttatcttctcttagctacacctactagtgataacatcccacttgaagggcattctc 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctttatcttctcttagctacacctactagtgataacatcccacttgaagggcattctc 440

                                                                       
Query: 427 ctatatatcgattcagccgtgcctgtttgcttacgtcattcagtgaatttgctagcacca 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctatatatcgattcagccgtgcctgtttgcttacgtcattcagtgaatttgctagcacca 500

                             
Query: 487 aagccacattcatgattc 504
           ||||||||||||||||||
Sbjct: 501 aagccacattcatgattc 518
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>gb|BT009056.1| Triticum aestivum clone wdr1f.pk001.o16:fis, full insert mRNA
           sequence
          Length = 1743

 Score =  488 bits (246), Expect = e-135
 Identities = 336/364 (92%), Gaps = 3/364 (0%)
 Strand = Plus / Plus

                                                                       
Query: 118 cagaccacatgtgccgncaaccgtccacgcctgacttgtctccagatgagcagcttgctg 177
           |||||||||||||||| |||||||| || | |||  ||||||||||||||||||||||||
Sbjct: 192 cagaccacatgtgccgtcaaccgtcgacacttgagctgtctccagatgagcagcttgctg 251

                                                                       
Query: 178 ccgaagaaaccttcaagttgtactgcaagccagttgagctctgcaatgttattcaaaaac 237
           | |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 252 ctgaagaaaccttcaagttgtactgcaagccagttgagctctgcaatgttatccaaaaac 311

                                                                       
Query: 238 gagcccttgataatcccgctttcctgcaaagatgccttcattacatgatacaggcaagcc 297
           |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 312 gagcccttgataatcccgcttttctgcaaagatgcctccattacatgatacaggcaagcc 371

                                                                       
Query: 298 gtaaaaagaggattcaactaaccgtatccctttctcgaggtatcgaatgcccagaccaga 357
           | |||||||||||||||||||| ||||||||||||||||| | | |||   | ||||| |
Sbjct: 372 gcaaaaagaggattcaactaactgtatccctttctcgaggca-caaat--actgaccaca 428

                                                                       
Query: 358 atatcttccccctttatcttctcttagctacacctactagtgataacatcccacttgaag 417
           | ||||||||||||||| || | |||||||||||||||||||||| ||||||||||||||
Sbjct: 429 acatcttccccctttatgttttgttagctacacctactagtgatagcatcccacttgaag 488

                                                                       
Query: 418 ggcattctcctatatatcgattcagccgtgcctgtttgcttacgtcattcagtgaatttg 477
           |||||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 489 ggcattctccgatatatcgattcagtcgtgcctgtttgcttacgtcattcactgaatttg 548

               
Query: 478 ctag 481
           ||||
Sbjct: 549 ctag 552
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>dbj|AB085818.1| Hordeum vulgare HvEMF2b mRNA, complete cds
          Length = 2448

 Score =  190 bits (96), Expect = 3e-45
 Identities = 268/325 (82%), Gaps = 9/325 (2%)
 Strand = Plus / Plus

                                                                       
Query: 156 tctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagccagttgag 215
           ||||||||||||||||||||||| |||||||  |||  ||||||||||||||| ||||||
Sbjct: 350 tctccagatgagcagcttgctgctgaagaaagtttcgcgttgtactgcaagccggttgag 409

                                                                       
Query: 216 ctctgcaatgttattcaaaaacgagcccttgataatcccgctttcctgcaaagatgcctt 275
           || | |||| | ||||||   |||||| ||   ||||||||||| |||||||||||||||
Sbjct: 410 ctatacaatatcattcaacggcgagccattaggaatcccgcttttctgcaaagatgcctt 469

                                                                       
Query: 276 cattacatgatacaggcaagccgtaaaaagaggattcaactaaccgtatccctttctcga 335
           || |||| |||||| |||||||| ||||||||||||||  |||| ||||| || ||||||
Sbjct: 470 cactacaagatacatgcaagccgaaaaaagaggattcagataactgtatcactatctcga 529

                                                                       
Query: 336 gg------tatcgaatgcccagaccagaatatcttccccctttatcttctcttagctaca 389
           ||      || ||| |  ||||| |||||| |||| || |||||  |||| |||||||||
Sbjct: 530 ggtacaaataccgagttgccagaacagaatgtctttcctctttacgttctattagctaca 589

                                                                       
Query: 390 cctactagtgataacatcccacttgaagggcattctcctatatatcgattcagccgtgcc 449
           |||||||    ||| ||  ||||||||||||||||||| ||||||||||||||  | |||
Sbjct: 590 cctacta---ctaatatttcacttgaagggcattctccgatatatcgattcagttgggcc 646

                                    
Query: 450 tgtttgcttacgtcattcagtgaat 474
           |||||||||||||| || |||||||
Sbjct: 647 tgtttgcttacgtcttttagtgaat 671
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>gb|AY887064.1| Triticum aestivum embryonic flower 2 mRNA, complete cds
          Length = 2101

 Score =  165 bits (83), Expect = 2e-37
 Identities = 161/187 (86%)
 Strand = Plus / Plus

                                                                       
Query: 153 ttgtctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagccagtt 212
           |||||||||||||||||||||||||| |||||||  |||  |||||||||||||||||||
Sbjct: 149 ttgtctccagatgagcagcttgctgctgaagaaagtttcgcgttgtactgcaagccagtt 208

                                                                       
Query: 213 gagctctgcaatgttattcaaaaacgagcccttgataatcccgctttcctgcaaagatgc 272
           ||||| | |||| | |||||    |||||| ||   ||||||||||| ||||||||||||
Sbjct: 209 gagctatacaatatcattcagcggcgagccattagaaatcccgcttttctgcaaagatgc 268

                                                                       
Query: 273 cttcattacatgatacaggcaagccgtaaaaagaggattcaactaaccgtatccctttct 332
           |||||||||| |||||| |||||||| ||||||||||||||  |||| ||||| || |||
Sbjct: 269 cttcattacaagatacatgcaagccgaaaaaagaggattcagataacggtatcactatct 328

                  
Query: 333 cgaggta 339
           |||||||
Sbjct: 329 cgaggta 335



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 108/130 (83%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                       
Query: 348 ccagaccagaatatcttccccctttatcttctcttagctacacctactagtgataacatc 407
           ||||| ||||||||||| || |||||| |||| || ||||||||||| ||| |||   | 
Sbjct: 350 ccagaacagaatatctttcctctttatgttctgttggctacacctaccagtaata---tt 406

                                                                       
Query: 408 ccacttgaagggcattctcctatatatcgattcagccgtgcctgtttgcttacgtcattc 467
            | ||||||||||||||||| |||||||||||||| || || |||||||||||  | || 
Sbjct: 407 tcgcttgaagggcattctccgatatatcgattcagtcgggcttgtttgcttaccgctttt 466

                     
Query: 468 agtgaatttg 477
           ||||||||||
Sbjct: 467 agtgaatttg 476
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>gb|BT008997.1| Triticum aestivum clone wdk2c.pk013.f22:fis, full insert mRNA
           sequence
          Length = 2145

 Score =  147 bits (74), Expect = 4e-32
 Identities = 152/178 (85%)
 Strand = Plus / Plus

                                                                       
Query: 162 gatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagccagttgagctctgc 221
           ||||||||||||||||| |||||||  |||  |||||||||||||||||||||||| | |
Sbjct: 1   gatgagcagcttgctgctgaagaaagtttcgcgttgtactgcaagccagttgagctatac 60

                                                                       
Query: 222 aatgttattcaaaaacgagcccttgataatcccgctttcctgcaaagatgccttcattac 281
           ||| | |||||    |||||| ||   ||||||||||| |||||||||||||||||||||
Sbjct: 61  aatatcattcagcggcgagccattagaaatcccgcttttctgcaaagatgccttcattac 120

                                                                     
Query: 282 atgatacaggcaagccgtaaaaagaggattcaactaaccgtatccctttctcgaggta 339
           | |||||| |||||||| ||||||||||||||  |||| ||||| || ||||||||||
Sbjct: 121 aagatacatgcaagccgaaaaaagaggattcagataacggtatcactatctcgaggta 178



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 108/130 (83%), Gaps = 3/130 (2%)
 Strand = Plus / Plus

                                                                       
Query: 348 ccagaccagaatatcttccccctttatcttctcttagctacacctactagtgataacatc 407
           ||||| ||||||||||| || |||||| |||| || ||||||||||| ||| |||   | 
Sbjct: 193 ccagaacagaatatctttcctctttatgttctgttggctacacctaccagtaata---tt 249

                                                                       
Query: 408 ccacttgaagggcattctcctatatatcgattcagccgtgcctgtttgcttacgtcattc 467
            | ||||||||||||||||| |||||||||||||| || || |||||||||||  | || 
Sbjct: 250 tcgcttgaagggcattctccgatatatcgattcagtcgggcttgtttgcttaccgctttt 309

                     
Query: 468 agtgaatttg 477
           ||||||||||
Sbjct: 310 agtgaatttg 319
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>dbj|AK100856.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123L01, full
           insert sequence
          Length = 2320

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 84/99 (84%), Gaps = 3/99 (3%)
 Strand = Plus / Plus

                                                                       
Query: 357 aatatcttccccctttatcttctcttagctacacctactagtgataacatcccacttgaa 416
           |||||||| || |||||| |||| ||||||| ||||||||   ||||  |  ||||||||
Sbjct: 454 aatatctttcctctttatgttctgttagctagacctacta---ataatgtttcacttgaa 510

                                                  
Query: 417 gggcattctcctatatatcgattcagccgtgcctgtttg 455
           ||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 511 gggcattctccgatatatcgattcagtcgtgcttgtttg 549



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 249 aatcccgctttcctgcaaagatgccttcattacatgatacaggcaagccgtaaaaagagg 308
           ||||| ||||| || ||||||||||||| ||||| ||| || ||||| || || ||||||
Sbjct: 340 aatcctgcttttcttcaaagatgccttctttacaagattcacgcaagacggaagaagagg 399

            
Query: 309 a 309
           |
Sbjct: 400 a 400



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 156 tctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagcc 208
           ||||| |||||||||||||| || ||||||| ||||   || |||||||||||
Sbjct: 247 tctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagcc 299
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>gb|AY232824.1| Zea mays VEF family protein (vef101) mRNA, complete cds
          Length = 2195

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 409 cacttgaagggcattctcctatatatcgattcag 442
           ||||||||||||||||||| || |||||||||||
Sbjct: 515 cacttgaagggcattctccaatttatcgattcag 548



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 196 tgtactgcaagccagttgagctctgcaatgttattcaa 233
           |||| ||||||||||| ||||||| |||| ||||||||
Sbjct: 299 tgtattgcaagccagtcgagctctacaatattattcaa 336
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>gb|AY898650.1| Zea mays cultivar luyu 14 embryonic flower 2 mRNA, complete cds
          Length = 2132

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 409 cacttgaagggcattctcctatatatcgattcag 442
           ||||||||||||||||||| || |||||||||||
Sbjct: 437 cacttgaagggcattctccaatttatcgattcag 470



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 196 tgtactgcaagccagttgagctctgcaatgttattcaa 233
           |||| ||||||||||| ||||||| |||| ||||||||
Sbjct: 221 tgtattgcaagccagtcgagctctacaatattattcaa 258
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>gb|DQ343238.1| Zea mays cultivar CML288 EMF-like mRNA, complete cds
          Length = 2073

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 32/34 (94%)
 Strand = Plus / Plus

                                             
Query: 409 cacttgaagggcattctcctatatatcgattcag 442
           ||||||||||||||||||| || |||||||||||
Sbjct: 392 cacttgaagggcattctccaatttatcgattcag 425



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 196 tgtactgcaagccagttgagctctgcaatgttattcaa 233
           |||| ||||||||||| ||||||| |||| ||||||||
Sbjct: 176 tgtattgcaagccagtcgagctctacaatattattcaa 213
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                    
Query: 419     gcattctcctatatatcgattcagccgtgcctgtttg 455
               ||||||||| |||||||||||||| ||||| ||||||
Sbjct: 7881046 gcattctccgatatatcgattcagtcgtgcttgtttg 7881010



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                    
Query: 156     tctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagcc 208
               ||||| |||||||||||||| || ||||||| ||||   || |||||||||||
Sbjct: 7883448 tctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagcc 7883396
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>dbj|AP005912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0064I23
          Length = 161865

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 419    gcattctcctatatatcgattcagccgtgcctgtttg 455
              ||||||||| |||||||||||||| ||||| ||||||
Sbjct: 128249 gcattctccgatatatcgattcagtcgtgcttgtttg 128213



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                   
Query: 156    tctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagcc 208
              ||||| |||||||||||||| || ||||||| ||||   || |||||||||||
Sbjct: 130651 tctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagcc 130599
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>emb|CR703753.2|CNS0G5YT Tetraodon nigroviridis full-length cDNA
          Length = 1117

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 31  cgccggcgccggcgcccttgtc 52
           ||||||||||||||||||||||
Sbjct: 597 cgccggcgccggcgcccttgtc 618
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>emb|CR702914.2|CNS0G5BI Tetraodon nigroviridis full-length cDNA
          Length = 1135

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 31  cgccggcgccggcgcccttgtc 52
           ||||||||||||||||||||||
Sbjct: 608 cgccggcgccggcgcccttgtc 629
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>dbj|AB085817.1| Hordeum vulgare HvEMF2a mRNA, complete cds
          Length = 2842

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 198 tactgcaagccagttgagctctgcaatgttattc 231
           |||||||||||||||||||| | |||| ||||||
Sbjct: 577 tactgcaagccagttgagctgtacaatcttattc 610



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 413 tgaagggcattctcctatatatcgattcagccg 445
           ||||||||||||||| || ||||| ||||||||
Sbjct: 795 tgaagggcattctccaatgtatcggttcagccg 827
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>dbj|AK065329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000I02, full
            insert sequence
          Length = 2023

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 189  ttcaagttgtactgcaagccag 210
            ||||||||||||||||||||||
Sbjct: 1266 ttcaagttgtactgcaagccag 1287
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>gb|AC040168.8| Homo sapiens chromosome 16 clone RP11-461O7, complete sequence
          Length = 170154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   aagggcattctcctatatatc 435
             |||||||||||||||||||||
Sbjct: 39101 aagggcattctcctatatatc 39121
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>gb|AC007495.9| Homo sapiens chromosome 16 clone RP11-355E10, complete sequence
          Length = 198575

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   aagggcattctcctatatatc 435
             |||||||||||||||||||||
Sbjct: 12910 aagggcattctcctatatatc 12930
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>dbj|AB035350.1| Oryza sativa (japonica cultivar-group) DNA, homologous to
           5'-flanking region of mitochondrial rps10 genes,
           clone:#16
          Length = 1392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                
Query: 156 tctccagatgagcagcttgctgccgaagaaaccttcaagttgtactgcaagcc 208
           ||||| |||||||||||||| || ||||||| ||||   || |||||||||||
Sbjct: 898 tctcccgatgagcagcttgcagctgaagaaagcttcgcattatactgcaagcc 950
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>gb|AC146536.3| Dasypus novemcinctus clone VMRC5-215B23, complete sequence
          Length = 113776

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 95156 agggcaagggcaagggcaga 95175
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>ref|XM_324227.1| Neurospora crassa OR74A hypothetical protein (NCU04871.1) partial
            mRNA
          Length = 6126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  agggcaagggcaagggcaga 121
            ||||||||||||||||||||
Sbjct: 2118 agggcaagggcaagggcaga 2137
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>ref|XM_954035.1| Neurospora crassa OR74A hypothetical protein (NCU04871.1) partial
            mRNA
          Length = 6126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 102  agggcaagggcaagggcaga 121
            ||||||||||||||||||||
Sbjct: 2118 agggcaagggcaagggcaga 2137
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>gb|AC145615.3| Homo sapiens BAC clone RP11-1217H2 from UL, complete sequence
          Length = 207889

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    agggcaagggcaagggcaga 121
              ||||||||||||||||||||
Sbjct: 143412 agggcaagggcaagggcaga 143393
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>gb|AC142086.3| Homo sapiens chromosome 16 clone RP11-989E6, complete sequence
          Length = 177574

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 31173 agggcaagggcaagggcaga 31154
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>gb|AC127536.5| Homo sapiens chromosome 15, clone RP11-1181H2, complete sequence
          Length = 168996

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 22927 agggcaagggcaagggcaga 22946
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>emb|AL109660.14|HSJ666F24 Human DNA sequence from clone RP4-666F24 on chromosome 1p13.1-13.3
              Contains the TSHB gene for thyroid stimulating hormone
              (beta), the gene for tetraspan 2 (TSPAN-2), a novel gene
              and one CpG island, complete sequence
          Length = 139563

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 484    ccaaagccacattcatgatt 503
              ||||||||||||||||||||
Sbjct: 120563 ccaaagccacattcatgatt 120582
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>emb|BX045959.1|CNS097MJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC2BD03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 355 agaatatcttccccctttat 374
           ||||||||||||||||||||
Sbjct: 42  agaatatcttccccctttat 23
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>gb|AC141587.2| Homo sapiens chromosome 16 clone RP11-1046E19, complete sequence
          Length = 186890

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 49926 agggcaagggcaagggcaga 49907
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 31      cgccggcgccggcgcccttg 50
               ||||||||||||||||||||
Sbjct: 2431042 cgccggcgccggcgcccttg 2431061
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>gb|AC182397.3| Pan troglodytes BAC clone CH251-345O12 from chromosome 16, complete
             sequence
          Length = 158303

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 89831 agggcaagggcaagggcaga 89812
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>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023
          Length = 2661830

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 101     tagggcaagggcaagggcag 120
               ||||||||||||||||||||
Sbjct: 2266726 tagggcaagggcaagggcag 2266707
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>gb|AC092342.3| Homo sapiens chromosome 16 clone RP11-264M14, complete sequence
          Length = 170324

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    agggcaagggcaagggcaga 121
              ||||||||||||||||||||
Sbjct: 140298 agggcaagggcaagggcaga 140279
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>gb|AC099036.1| Drosophila melanogaster, chromosome 2R, region 59C-59D, BAC clone
             BACR34K16, complete sequence
          Length = 180361

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ttggatttcgatttcgattt 101
             ||||||||||||||||||||
Sbjct: 62382 ttggatttcgatttcgattt 62363
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 31      cgccggcgccggcgcccttg 50
               ||||||||||||||||||||
Sbjct: 4280723 cgccggcgccggcgcccttg 4280704
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>gb|AC010539.9| Homo sapiens chromosome 16 clone RP11-373A21, complete sequence
          Length = 101043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 51814 agggcaagggcaagggcaga 51795
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>gb|AC140890.2| Homo sapiens chromosome 16 clone RP11-188D24, complete sequence
          Length = 172153

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 94690 agggcaagggcaagggcaga 94671
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>gb|AC136428.3| Homo sapiens chromosome 16 clone RP11-104C4, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   agggcaagggcaagggcaga 121
             ||||||||||||||||||||
Sbjct: 60530 agggcaagggcaagggcaga 60511
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>gb|AC136877.2| Homo sapiens chromosome 16 clone RP11-1258I11, complete sequence
          Length = 180454

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 102    agggcaagggcaagggcaga 121
              ||||||||||||||||||||
Sbjct: 148511 agggcaagggcaagggcaga 148492
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>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0554A06
          Length = 165311

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     cgccggcgccggcgcccttg 50
              ||||||||||||||||||||
Sbjct: 125944 cgccggcgccggcgcccttg 125925
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>dbj|AK109842.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-E02, full
           insert sequence
          Length = 1500

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  cgccggcgccggcgcccttg 50
           ||||||||||||||||||||
Sbjct: 791 cgccggcgccggcgcccttg 772
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>gb|AC006935.2|AC006935 Drosophila melanogaster, chromosome 2R, region 59D2-59D3, P1 clone
             DS06017, complete sequence
          Length = 85966

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    ttggatttcgatttcgattt 101
             ||||||||||||||||||||
Sbjct: 30187 ttggatttcgatttcgattt 30168
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>gb|AE003460.2| Drosophila melanogaster chromosome 2R, section 68 of 73 of the complete
             sequence
          Length = 299331

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    ttggatttcgatttcgattt 101
             ||||||||||||||||||||
Sbjct: 34419 ttggatttcgatttcgattt 34438
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>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 478    ctagcaccaaagccacattc 497
              ||||||||||||||||||||
Sbjct: 113075 ctagcaccaaagccacattc 113094
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>gb|AC146366.3| Dasypus novemcinctus clone VMRC5-468M8, complete sequence
          Length = 112552

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 agggcaagggcaagggcaga 121
           ||||||||||||||||||||
Sbjct: 14  agggcaagggcaagggcaga 33


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,486,145
Number of Sequences: 3902068
Number of extensions: 3486145
Number of successful extensions: 76070
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75720
Number of HSP's gapped (non-prelim): 349
length of query: 504
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 482
effective length of database: 17,147,199,772
effective search space: 8264950290104
effective search space used: 8264950290104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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