ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basdp16 |
|---|---|
| Clone Library Name | barley_pub |
>UMP3_ARATH (Q9LEV3) Protein At5g10860, mitochondrial precursor| Length = 206 Score = 117 bits (294), Expect(2) = 4e-54 Identities = 60/70 (85%), Positives = 64/70 (91%) Frame = +2 Query: 335 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 514 DYLRKIIVQGRSSKSTKVGDIMTEENKLITV P+T+VL+AMQLMTD RIRHIPVI M Sbjct: 115 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGM 174 Query: 515 MGMVSIGDVV 544 +GMVSIGDVV Sbjct: 175 IGMVSIGDVV 184 Score = 113 bits (283), Expect(2) = 4e-54 Identities = 54/88 (61%), Positives = 72/88 (81%), Gaps = 1/88 (1%) Frame = +3 Query: 78 MQRAIQAIGSHGSVLKSAVLQHISVVKPAMLPAVF-PRFMSVSSAQIEESGFESSTVADI 254 MQ I++ S G+V+K +VLQH+ V+ PA+ P+VF R S A++EESGFES+T++D+ Sbjct: 1 MQGVIRSFVSGGNVVKGSVLQHLRVINPAIQPSVFCSRSESTQPARMEESGFESTTISDV 60 Query: 255 LKSKGKSADGSWLWCTTDDSVYDAVKSI 338 +KSKGKSADGSWLWCTTDD+VYDAVKS+ Sbjct: 61 MKSKGKSADGSWLWCTTDDTVYDAVKSM 88
>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)| Length = 196 Score = 45.4 bits (106), Expect = 1e-04 Identities = 23/71 (32%), Positives = 46/71 (64%), Gaps = 1/71 (1%) Frame = +2 Query: 335 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGAQ 511 D + K++ QG++ DIM++ +ITV+ D V +A++LM DK IR +P++ + Sbjct: 55 DLVIKVVSQGKNPDEVIARDIMSQP--VITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGK 112 Query: 512 MMGMVSIGDVV 544 ++G+V++ D++ Sbjct: 113 LIGIVTMQDIL 123
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 44.7 bits (104), Expect = 2e-04 Identities = 20/54 (37%), Positives = 39/54 (72%) Frame = +2 Query: 383 KVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVV 544 KV +IMT E ++ + P + + M++M+++RIR +P++SG ++ G+V+I DV+ Sbjct: 147 KVKEIMTSE--VVYLSPMDSLFEGMRVMSERRIRRLPLVSGEELRGIVTIKDVL 198 Score = 30.4 bits (67), Expect = 3.3 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%) Frame = +2 Query: 416 LITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMM-GMVSIGDVV 544 L V +RVL + M R+RH+P++ ++ GMVS D+V Sbjct: 14 LAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLV 57
>Y1426_METJA (Q58821) Hypothetical protein MJ1426| Length = 168 Score = 41.2 bits (95), Expect = 0.002 Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%) Frame = +2 Query: 365 RSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDV 541 +++ TKV D+MT K+I KPD + A +LM I+ +PV+ ++G+V+ GD+ Sbjct: 106 KNALKTKVRDVMTR--KVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDL 163 Query: 542 V 544 + Sbjct: 164 I 164
>Y653_METJA (Q58069) Hypothetical protein MJ0653| Length = 194 Score = 41.2 bits (95), Expect = 0.002 Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 3/67 (4%) Frame = +2 Query: 353 IVQGRSSKSTKVGDIMTEE---NKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGM 523 IV+ SK+ K D++ EE K+IT+ + + +A ++M I+ +PV+ +++G+ Sbjct: 58 IVKRVVSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGELVGI 117 Query: 524 VSIGDVV 544 V+ D+V Sbjct: 118 VTQSDIV 124
>YHCV_BACSU (P54606) Hypothetical protein yhcV| Length = 140 Score = 40.4 bits (93), Expect = 0.003 Identities = 21/69 (30%), Positives = 40/69 (57%) Frame = +2 Query: 335 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 514 D + QGR + T V ++M+ E L++ P+ + A QLM +IR +P++ + Sbjct: 52 DIALRTTAQGRDGQ-TPVSEVMSTE--LVSGNPNMSLEDASQLMAQHQIRRLPIVDQNNL 108 Query: 515 MGMVSIGDV 541 +G+V++GD+ Sbjct: 109 VGIVALGDL 117 Score = 29.6 bits (65), Expect = 5.7 Identities = 16/54 (29%), Positives = 28/54 (51%) Frame = +2 Query: 380 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDV 541 + V D MT + + TV P+ + +A LM + IPV+ + GM++ D+ Sbjct: 2 SSVKDTMTTQ--VATVSPNQTIQEAASLMKQHNVGAIPVVEQGVLKGMLTDRDI 53
>IMDH_TRIFO (P50097) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 503 Score = 38.5 bits (88), Expect = 0.012 Identities = 16/44 (36%), Positives = 30/44 (68%) Frame = +2 Query: 380 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQ 511 TKV D+MT +KL+T DT++ +A +++ +K++ +P+I Q Sbjct: 161 TKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQ 204
>Y450_METJA (Q57892) Hypothetical protein MJ0450| Length = 186 Score = 38.1 bits (87), Expect = 0.016 Identities = 15/70 (21%), Positives = 42/70 (60%) Frame = +2 Query: 335 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 514 D ++K++++ KV DI + KL+T+ P+T + +A+++M + + ++ ++ Sbjct: 57 DIIKKVLIRKLPPDKVKVEDISS--GKLVTIPPNTTIDEALEIMNKYKTNELFIVDDGKI 114 Query: 515 MGMVSIGDVV 544 +G+++ D++ Sbjct: 115 VGVITEEDLI 124
>Y1546_AQUAE (O67500) Hypothetical phosphosugar isomerase aq_1546| Length = 322 Score = 37.7 bits (86), Expect = 0.021 Identities = 21/69 (30%), Positives = 43/69 (62%), Gaps = 1/69 (1%) Frame = +2 Query: 341 LRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QMM 517 LR+ + +G S ++T+ D+MT+ K T+KPD L+A++ M D I + V++ + + Sbjct: 251 LRRFVNRGGSFENTRAKDVMTKNPK--TIKPDELALKALRKMEDHNITVLIVVNEENEPI 308 Query: 518 GMVSIGDVV 544 G++ + D++ Sbjct: 309 GILHMHDIL 317
>Y188_METJA (Q57647) Hypothetical protein MJ0188| Length = 265 Score = 37.4 bits (85), Expect = 0.027 Identities = 18/56 (32%), Positives = 33/56 (58%) Frame = +2 Query: 377 STKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVV 544 S KV + MT+ K++TV D V ++L+ + PV+ +++G+VS+ D+V Sbjct: 2 SVKVSEYMTK--KVVTVSKDNTVKDVIKLLKETGHNSFPVVENGKLIGIVSVHDIV 55 Score = 29.3 bits (64), Expect = 7.5 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 1/55 (1%) Frame = +2 Query: 383 KVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QMMGMVSIGDVV 544 KV ++MT+ ++ PD ++ ++M +PV+ ++G++S DV+ Sbjct: 62 KVENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDVI 116
>KR107_HUMAN (P60409) Keratin-associated protein 10-7 (Keratin-associated| protein 10.7) (High sulfur keratin-associated protein 10.7) (Keratin-associated protein 18-7) (Keratin-associated protein 18.7) Length = 370 Score = 36.6 bits (83), Expect = 0.047 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 3/57 (5%) Frame = +2 Query: 116 CTQICCPPTHQCC---EACYAARCVPALHVSIICSNRGERI*EQHCCRYFEVQREEC 277 C CC P CC +C A+ C PA VS++C R CC Q+ C Sbjct: 317 CRPACCVPVPSCCAPTSSCQASCCRPASCVSLLCRPACSR---PACCGPTSTQKSSC 370
>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I| Length = 730 Score = 36.2 bits (82), Expect = 0.061 Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%) Frame = +2 Query: 335 DYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 514 D + + G +++ T + DIM+ IT DTR A+ LM + + RH+PV+S Sbjct: 114 DIATRCVGAGLNARQTLIADIMSTSPLCIT--SDTRFDDALLLMIEHKFRHLPVVSDGGP 171 Query: 515 MGMV-SIGDVV 544 G GDV+ Sbjct: 172 DGSAGDEGDVI 182
>KR10B_HUMAN (P60412) Keratin-associated protein 10-11 (Keratin-associated| protein 10.11) (High sulfur keratin-associated protein 10.11) (Keratin-associated protein 18-11) (Keratin-associated protein 18.11) Length = 298 Score = 35.0 bits (79), Expect = 0.14 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 3/41 (7%) Frame = +2 Query: 116 CTQICCPPTHQCC---EACYAARCVPALHVSIICSNRGERI 229 C CC P CC +C ++ C PA VS++C R+ Sbjct: 245 CRSTCCVPVSSCCAPTSSCQSSCCCPASCVSLLCRPASSRL 285
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 35.0 bits (79), Expect = 0.14 Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 3/66 (4%) Frame = +2 Query: 353 IVQGRSSKS--TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGAQMMGM 523 IV+ S++ + V MT++ K +T DT V A+ +M + RH+P+I S ++ G+ Sbjct: 55 IVKAASNRDIDSPVEKYMTKDVKGVT--EDTEVTDALDIMLNNGFRHLPIIKSNGKLYGI 112 Query: 524 VSIGDV 541 VSI D+ Sbjct: 113 VSIRDL 118
>Y1225_METJA (Q58622) Hypothetical protein MJ1225| Length = 280 Score = 33.9 bits (76), Expect = 0.30 Identities = 13/51 (25%), Positives = 32/51 (62%), Gaps = 2/51 (3%) Frame = +2 Query: 398 MTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA--QMMGMVSIGDVV 544 + + K++TV P T + +A+ M + + R +PV++ +++G+++ D+V Sbjct: 8 IAQNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIV 58
>KR101_HUMAN (P60331) Keratin-associated protein 10-1 (Keratin-associated| protein 10.1) (High sulfur keratin-associated protein 10.1) (Keratin-associated protein 18-1) (Keratin-associated protein 18.1) Length = 282 Score = 33.9 bits (76), Expect = 0.30 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 3/34 (8%) Frame = +2 Query: 116 CTQICCPPTHQCC---EACYAARCVPALHVSIIC 208 C CC P CC +C A+ C PA VS++C Sbjct: 240 CRPACCMPVSSCCAPASSCQASCCRPASCVSLLC 273
>IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 486 Score = 33.9 bits (76), Expect = 0.30 Identities = 20/72 (27%), Positives = 42/72 (58%), Gaps = 1/72 (1%) Frame = +2 Query: 332 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGA 508 + + K + R K K ++MT+E +ITV V +A+++M + RI +PV+ Sbjct: 136 VGIITKKDIAAREGKLVK--ELMTKE--VITVPESIEVEEALKIMIENRIDRLPVVDERG 191 Query: 509 QMMGMVSIGDVV 544 +++G++++ D+V Sbjct: 192 KLVGLITMSDLV 203
>IMDH_PYRFU (P42851) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 485 Score = 33.9 bits (76), Expect = 0.30 Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +2 Query: 332 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVIS-GA 508 + + K + R ++ K ++MT E +ITV V +A+++M + RI +PV++ Sbjct: 136 VGIITKKDIAAREGRTVK--ELMTRE--VITVPESVDVEEALKIMMENRIDRLPVVNEDG 191 Query: 509 QMMGMVSIGDVV 544 +++G++++ D+V Sbjct: 192 KLVGLITMSDLV 203
>IMDH_HAEIN (P44334) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 488 Score = 33.5 bits (75), Expect = 0.40 Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 6/68 (8%) Frame = +2 Query: 353 IVQGRSSKSTK-----VGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGA-QM 514 I+ GR ++ K V +MT++ L+TVK + ++LM R+ + V++ + ++ Sbjct: 134 IITGRDTRFVKDLSKTVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKL 193 Query: 515 MGMVSIGD 538 GM+++ D Sbjct: 194 KGMITVKD 201
>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1| (AKIN gamma1) (AKING1) Length = 424 Score = 33.5 bits (75), Expect = 0.40 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 2/56 (3%) Frame = +2 Query: 380 TKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI--SGAQMMGMVSIGDV 541 ++VG + ++ +I + D VLQA +LM KRI IPVI + + +G +S+ DV Sbjct: 256 SEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPVIERNSEKPVGNISLRDV 311
>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 490 Score = 33.1 bits (74), Expect = 0.52 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = +2 Query: 419 ITVKPDTRVLQAMQLMTDKRIRHIPVI 499 +TVKPDTRV +A+ +M +I +PV+ Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVV 127
>IMDH_PYRAB (Q9UY49) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 485 Score = 33.1 bits (74), Expect = 0.52 Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +2 Query: 332 IDYLRKIIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI-SGA 508 + + K + R K K ++MT++ +ITV + V +A+++M + RI +PV+ Sbjct: 136 VGIISKKDIAAREGKLVK--ELMTKD--VITVPENIEVEEALKIMIENRIDRLPVVDKEG 191 Query: 509 QMMGMVSIGDVV 544 +++G++++ D+V Sbjct: 192 RLIGLITMSDLV 203
>PPAC_THEMA (Q9WZ56) Probable manganese-dependent inorganic pyrophosphatase (EC| 3.6.1.1) (Pyrophosphate phospho-hydrolase) (PPase) Length = 548 Score = 32.7 bits (73), Expect = 0.67 Identities = 14/41 (34%), Positives = 25/41 (60%) Frame = +2 Query: 419 ITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDV 541 I V PDT LM + I+++PV+S +M+G+V+ ++ Sbjct: 82 IFVTPDTSAYDVAMLMESRGIKNVPVVSKEKMIGVVTESNI 122
>Y1404_METJA (Q58799) Hypothetical protein MJ1404| Length = 421 Score = 32.3 bits (72), Expect = 0.88 Identities = 15/43 (34%), Positives = 25/43 (58%) Frame = +2 Query: 416 LITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDVV 544 LITV D A ++M + IR +PV+ G + G+V+ D++ Sbjct: 221 LITVDVDASAADAARVMQEYDIRGVPVVKGKSLRGIVTRLDII 263 Score = 30.0 bits (66), Expect = 4.4 Identities = 17/56 (30%), Positives = 34/56 (60%), Gaps = 3/56 (5%) Frame = +2 Query: 386 VGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVI---SGAQMMGMVSIGDVV 544 V +IMT++ ++TV PDT V +A+ +M + H+ V+ G + ++S+ D++ Sbjct: 9 VKEIMTKD--VVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRDLL 62
>KR10C_HUMAN (P60413) Keratin-associated protein 10-12 (Keratin-associated| protein 10.12) (High sulfur keratin-associated protein 10.12) (Keratin-associated protein 18-12) (Keratin-associated protein 18.12) Length = 245 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = +2 Query: 116 CTQICCPPTHQCCEACYAARCVPALHVSIICSNRGERI*EQHCC 247 C +CC P+ CC+ + C PA +S C +Q CC Sbjct: 120 CMPVCCGPSSSCCQ---QSSCQPACCISSPC--------QQSCC 152
>SYV_BRUME (Q8YGX8) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 910 Score = 30.8 bits (68), Expect = 2.6 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +1 Query: 280 MDHGSGAPQMIVSMMLSNRLSPENHRAGSILQVNQSWRY 396 MDH A QM+V L+ R P H G + + W++ Sbjct: 82 MDHAGIATQMVVERQLAERKEPNRHAMGREKFIERIWQW 120
>Y392_METJA (Q57837) Hypothetical protein MJ0392 (EC 3.4.24.-)| Length = 339 Score = 30.4 bits (67), Expect = 3.3 Identities = 15/56 (26%), Positives = 28/56 (50%) Frame = +2 Query: 374 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQMMGMVSIGDV 541 K+ K DIMT +T PD + + + M + PV+ +++G + IG++ Sbjct: 218 KNIKAKDIMTPNPVYVT--PDMSIEEFLDFMLKHKYFGYPVVENGKLVGCIGIGNI 271
>MUCAP_PIG (P12021) Apomucin (Mucin core protein) (Fragment)| Length = 1150 Score = 30.4 bits (67), Expect = 3.3 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 294 WCTTDDSVYDAVKSIISGKSSCRVDP 371 WC +D VYD+ + + KSSC+ P Sbjct: 1041 WCAEEDRVYDSKQCCYTCKSSCKPSP 1066
>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd| Length = 72 Score = 30.0 bits (66), Expect = 4.4 Identities = 15/46 (32%), Positives = 17/46 (36%) Frame = +2 Query: 116 CTQICCPPTHQCCEACYAARCVPALHVSIICSNRGERI*EQHCCRY 253 C CC P CC C RC P C +R Q CC + Sbjct: 28 CCGPCCGPCGPCCGPC-GPRCGPCGPCGPCCGTMEKRNGLQRCCPF 72
>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated| protein 10.8) (High sulfur keratin-associated protein 10.8) (Keratin-associated protein 18-8) (Keratin-associated protein 18.8) Length = 259 Score = 29.6 bits (65), Expect = 5.7 Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 3/34 (8%) Frame = +2 Query: 116 CTQICCPPTHQCC---EACYAARCVPALHVSIIC 208 C CC P CC +C + C PA +S +C Sbjct: 217 CRPACCVPVPSCCVPASSCQPSCCHPASCLSFLC 250 Score = 29.3 bits (64), Expect = 7.5 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 3/38 (7%) Frame = +2 Query: 107 TWQ---CTQICCPPTHQCCEACYAARCVPALHVSIICS 211 +WQ C + CC P C + C PA ++++C+ Sbjct: 40 SWQVDNCQESCCEPRSCASSCCTPSCCAPAPCLALVCA 77
>HRCA_MYCPU (Q98R68) Heat-inducible transcription repressor hrcA| Length = 347 Score = 29.6 bits (65), Expect = 5.7 Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Frame = +2 Query: 341 LRKII--VQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISGAQM 514 L KII ++ S T ++ EEN I ++PD + ++ D +IR I V+ +M Sbjct: 256 LTKIIKLIESTSIWQTIEDNLEEEENIKIEIRPDNSSFLSKKISIDNKIREISVVGSKKM 315
>KRA48_HUMAN (Q9BYQ9) Keratin-associated protein 4-8 (Keratin-associated protein| 4.8) (Ultrahigh sulfur keratin-associated protein 4.8) (Fragment) Length = 114 Score = 29.6 bits (65), Expect = 5.7 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 116 CTQICCPPTHQCCEA--CYAARCVPALHVSIICSNRGERI*EQHCCR 250 C CC P QCC++ C C P+ +S C E CCR Sbjct: 34 CVSSCCKP--QCCQSVCCQPTCCHPSCSISSCCR---PSCCESSCCR 75 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 116 CTQICCPPTHQCC--EACYAARCVPALHVSIIC 208 C +CC PT CC C ++ C P+ VS C Sbjct: 9 CQSVCCQPT--CCHPSCCISSCCRPSCCVSSCC 39
>IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 29.6 bits (65), Expect = 5.7 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 374 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDVV 544 +S +V ++MT+ LIT + A+ L+ +I +PV+ G ++ G++++ D V Sbjct: 181 QSKQVAEVMTKA-PLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFV 237
>IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 29.6 bits (65), Expect = 5.7 Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%) Frame = +2 Query: 374 KSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVSIGDVV 544 +S +V ++MT+ LIT + A+ L+ +I +PV+ G ++ G++++ D V Sbjct: 181 QSKQVAEVMTKA-PLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFV 237
>PMP10_CHLPN (Q9RB65) Probable outer membrane protein pmp10 precursor| (Polymorphic membrane protein 10) (Outer membrane protein 5) Length = 928 Score = 29.3 bits (64), Expect = 7.5 Identities = 14/52 (26%), Positives = 25/52 (48%) Frame = +2 Query: 350 IIVQGRSSKSTKVGDIMTEENKLITVKPDTRVLQAMQLMTDKRIRHIPVISG 505 I+ G S S + GDI N ++ P T ++ + + +I ++ ISG Sbjct: 326 ILAAGECSLSAEAGDITFNGNAIVATTPQTTKRNSIDIGSTAKITNLRAISG 377
>KR414_HUMAN (Q9BYQ6) Keratin-associated protein 4-14 (Keratin-associated| protein 4.14) (Ultrahigh sulfur keratin-associated protein 4.14) Length = 195 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 116 CTQICCPPTHQCCEA--CYAARCVPALHVSIICSNRGERI*EQHCCR 250 C CC P QCC++ C C P+ +S C E CCR Sbjct: 115 CVSSCCRP--QCCQSVCCQPTCCHPSCSISSCCR---PSCCESSCCR 156 Score = 28.9 bits (63), Expect = 9.7 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%) Frame = +2 Query: 116 CTQICCPPTHQCC--EACYAARCVPALHVSIIC 208 C +CC PT CC C ++ C P+ VS C Sbjct: 55 CQSVCCQPT--CCRPRCCISSCCRPSCCVSSCC 85
>DXR_SYNPX (Q7U8C3) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 409 Score = 29.3 bits (64), Expect = 7.5 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Frame = -1 Query: 394 ISNFG*LGGSTLH--DDFPE---IIDLTAS*TLSSVVHQ--SHDPSALFPLDFKISATVL 236 + + G +G TL ++FPE ++ LTA L +V Q H P + ++ L Sbjct: 2 LGSTGSIGTQTLQIAEEFPEQFRVVALTAGQNLDLLVQQIQRHQPELV-----ALANADL 56 Query: 235 LSNPLSSI*ADDTDMKRGNTAGSIAGFTTLMCWRTADL 122 L + A TD KR G G W +ADL Sbjct: 57 LPELQQRLDALGTDRKRPQLVGGPDGLNIAASWESADL 94
>CLCN6_RABIT (Q9TT16) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 29.3 bits (64), Expect = 7.5 Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 422 TVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVS 529 TV P+T V Q L +RH+PV++ +++G+V+ Sbjct: 813 TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIVT 849
>KR105_HUMAN (P60370) Keratin-associated protein 10-5 (Keratin-associated| protein 10.5) (High sulfur keratin-associated protein 10.5) (Keratin-associated protein 18-5) (Keratin-associated protein 18.5) Length = 271 Score = 29.3 bits (64), Expect = 7.5 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 3/34 (8%) Frame = +2 Query: 116 CTQICCPPTHQCC---EACYAARCVPALHVSIIC 208 C CC P CC + A+ C PA VS++C Sbjct: 229 CRPACCVPISSCCAPASSYQASCCRPASCVSLLC 262
>SYV_BRUSU (Q8G0Y3) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 910 Score = 29.3 bits (64), Expect = 7.5 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 Query: 280 MDHGSGAPQMIVSMMLSNRLSPENHRAGSILQVNQSWRY 396 +DH A QM+V L+ R P H G + + W++ Sbjct: 82 IDHAGIATQMVVERQLAERKEPNRHAMGREKFIERIWQW 120
>SRS2_SCHPO (Q10213) ATP-dependent DNA helicase srs2 (EC 3.6.1.-)| Length = 887 Score = 29.3 bits (64), Expect = 7.5 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%) Frame = -1 Query: 304 VVHQSHDPSALF-PLDFKISATVLLSNPLSSI*ADDTDMKRGNT 176 +V QS + S +F LD+KIS VLL N L+ I + + K G + Sbjct: 541 LVQQSDNISCIFYELDYKISTIVLLQNFLTQIALVNEEQKEGES 584
>MQO_COREF (Q8FP91) Probable malate:quinone oxidoreductase (EC 1.1.99.16)| (Malate dehydrogenase [acceptor]) (MQO) Length = 642 Score = 29.3 bits (64), Expect = 7.5 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +3 Query: 231 ESSTVADILKSKGKSADGSWLWCTTDDSVYDAVKSIISGKSSCRVDPPSQPKLE 392 + S +A+I G G WL CT ++ + + GK+S P S P L+ Sbjct: 399 QKSGIAEIRGFGGFPVSGQWLRCTNEELIEQHAAKVY-GKASVGAPPMSVPHLD 451
>KRA49_HUMAN (Q9BYQ8) Keratin-associated protein 4-9 (Keratin-associated protein| 4.9) (Ultrahigh sulfur keratin-associated protein 4.9) (Fragment) Length = 191 Score = 28.9 bits (63), Expect = 9.7 Identities = 16/47 (34%), Positives = 20/47 (42%), Gaps = 2/47 (4%) Frame = +2 Query: 116 CTQICCPPTHQCCEA--CYAARCVPALHVSIICSNRGERI*EQHCCR 250 C CC P QCC++ C C P+ +S C E CCR Sbjct: 111 CVSSCCKP--QCCQSVCCQPNCCRPSCSISSCCR---PSCCESSCCR 152
>Y868_METJA (Q58278) Hypothetical protein MJ0868| Length = 127 Score = 28.9 bits (63), Expect = 9.7 Identities = 14/44 (31%), Positives = 29/44 (65%), Gaps = 2/44 (4%) Frame = +2 Query: 419 ITVKPDTRVLQAMQLMTDKRIRHIPVISGAQ--MMGMVSIGDVV 544 ITV P+ + +A+++M +K I H+ V S + ++G++S D++ Sbjct: 76 ITVSPEAPLEKAVEIMAEKGIHHLYVKSPCEDKIVGVLSSKDII 119
>NAB3_YEAST (P38996) Nuclear polyadenylated RNA-binding protein 3| Length = 802 Score = 28.9 bits (63), Expect = 9.7 Identities = 19/59 (32%), Positives = 30/59 (50%) Frame = +1 Query: 367 ILQVNQSWRYHD*REQADHGEA*HQSPASNAADDRQAYQAHSGDQRRTDDGDGLDW*RR 543 IL+V+ S + R Q DHG+ S ++ + ++ +Q SGD D+G G RR Sbjct: 395 ILEVSSS----NARPQFDHGDHGTNSSSTFISSAKRPFQTESGDMYNDDNGAGYKKSRR 449
>CLCN6_HUMAN (P51797) Chloride channel protein 6 (ClC-6)| Length = 869 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 422 TVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVS 529 TV P+T V Q L +RH+PV++ +++G+++ Sbjct: 813 TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIIT 849
>CLCN6_MOUSE (O35454) Chloride channel protein 6 (ClC-6)| Length = 870 Score = 28.9 bits (63), Expect = 9.7 Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 422 TVKPDTRVLQAMQLMTDKRIRHIPVISG-AQMMGMVS 529 TV P+T V Q L +RH+PV++ +++G+++ Sbjct: 814 TVSPNTHVSQVFNLFRTMGLRHLPVVNAVGEIVGIIT 850 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,431,564 Number of Sequences: 219361 Number of extensions: 1490375 Number of successful extensions: 4708 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4377 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4680 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4315578075 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
