Clone Name | basdp16 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_469638.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1169 Score = 232 bits (117), Expect = 1e-57 Identities = 153/165 (92%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 415 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 474 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 475 atcatgactgaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagca 534 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatc 499 ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 535 atgcagctgatgacagagaagcgcatcaggcacatcccggtgatc 579 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 184 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 243 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 244 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 303 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 304 gatgactctgtctatgatgctgtcaaatc 332 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 75 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 134 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 135 gcgacacatcagtg 148
>dbj|AB110184.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein, complete cds, clone: 14FPB077 Length = 1057 Score = 232 bits (117), Expect = 1e-57 Identities = 153/165 (92%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 366 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 425 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 426 atcatgactgaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagca 485 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatc 499 ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 486 atgcagctgatgacagagaagcgcatcaggcacatcccggtgatc 530 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 135 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 194 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 195 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 254 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 255 gatgactctgtctatgatgctgtcaaatc 283 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 26 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 85 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 86 gcgacacatcagtg 99
>dbj|AK068510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152K18, full insert sequence Length = 3163 Score = 232 bits (117), Expect = 1e-57 Identities = 153/165 (92%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 2474 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 2533 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 2534 atcatgactgaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagca 2593 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatc 499 ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 2594 atgcagctgatgacagagaagcgcatcaggcacatcccggtgatc 2638 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 2245 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 2304 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 2305 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 2364 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 2365 gatgactctgtctatgatgctgtcaaatc 2393 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 2136 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 2195 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 2196 gcgacacatcagtg 2209
>dbj|AK061742.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-F01, full insert sequence Length = 1067 Score = 232 bits (117), Expect = 1e-57 Identities = 153/165 (92%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 486 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 545 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 546 atcatgactgaagagaaccagctgatcacggtgaagcctgataccagagtcctgcaagca 605 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatc 499 ||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 606 atgcagctgatgacagagaagcgcatcaggcacatcccggtgatc 650 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 255 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 314 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 315 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 374 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 375 gatgactctgtctatgatgctgtcaaatc 403 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 146 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 205 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 206 gcgacacatcagtg 219
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 29915824 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 29915765 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 29915764 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 29915705 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 29915704 gatgactctgtctatgatgctgtcaaatc 29915676 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 29914823 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcagctgatga 29914764 Query: 468 cag 470 ||| Sbjct: 29914763 cag 29914761 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 29915145 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 29915086 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 29915085 atcatgactgaagag 29915071 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 29915933 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 29915874 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 29915873 gcgacacatcagtg 29915860 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 468 cagacaagcgtatcaggcacattccggtgatc 499 |||| ||||| ||||||||||| ||||||||| Sbjct: 29914669 cagagaagcgcatcaggcacatcccggtgatc 29914638
>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete sequence Length = 159661 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Plus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 94782 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 94841 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 94842 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 94901 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 94902 gatgactctgtctatgatgctgtcaaatc 94930 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Plus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95783 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcagctgatga 95842 Query: 468 cag 470 ||| Sbjct: 95843 cag 95845 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 95461 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 95520 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 95521 atcatgactgaagag 95535 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Plus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 94673 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 94732 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 94733 gcgacacatcagtg 94746 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 468 cagacaagcgtatcaggcacattccggtgatc 499 |||| ||||| ||||||||||| ||||||||| Sbjct: 95937 cagagaagcgcatcaggcacatcccggtgatc 95968
>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete sequence Length = 139946 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 81765 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 81706 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 81705 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 81646 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 81645 gatgactctgtctatgatgctgtcaaatc 81617 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 80764 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcagctgatga 80705 Query: 468 cag 470 ||| Sbjct: 80704 cag 80702 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 81086 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 81027 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 81026 atcatgactgaagag 81012 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 81874 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 81815 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 81814 gcgacacatcagtg 81801 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 468 cagacaagcgtatcaggcacattccggtgatc 499 |||| ||||| ||||||||||| ||||||||| Sbjct: 80610 cagagaagcgcatcaggcacatcccggtgatc 80579
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 168 bits (85), Expect = 1e-38 Identities = 133/149 (89%) Strand = Plus / Minus Query: 186 cgcttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgtt 245 |||| ||||||||| ||||||||||||||||||||||| |||||||||| |||||| Sbjct: 30007246 cgctccatgtcagtttcatctgctcaaatagaggagagtggatttgagactgccactgtg 30007187 Query: 246 gcagatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccaca 305 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||| || Sbjct: 30007186 gcagatattttgaagtctaaggggaagagtgctgatggatcttggctctggtgcactact 30007127 Query: 306 gatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||||||| Sbjct: 30007126 gatgactctgtctatgatgctgtcaaatc 30007098 Score = 109 bits (55), Expect = 1e-20 Identities = 61/63 (96%) Strand = Plus / Minus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 30006245 agaaccagctgatcacggtgaagcctgataccagagtcctgcaagcaatgcagctgatga 30006186 Query: 468 cag 470 ||| Sbjct: 30006185 cag 30006183 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Minus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||| ||| |||||||||| |||||||| ||||| ||||||||||| ||||||||||| Sbjct: 30006567 gattacctcaggaaaatcatagtgcagggacgatcttccaagtcaactaaagttggagac 30006508 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 30006507 atcatgactgaagag 30006493 Score = 75.8 bits (38), Expect = 1e-10 Identities = 65/74 (87%) Strand = Plus / Minus Query: 77 aatgcagcgagcaattcaagctatcggatcacatggcagtgtactcaaatctgctgtcct 136 |||||| || ||||||||||||||||| |||||||||||| | ||||| |||||||| || Sbjct: 30007355 aatgcaacgggcaattcaagctatcgggtcacatggcagtctcctcaagtctgctgttct 30007296 Query: 137 ccaacacatcagtg 150 | ||||||||||| Sbjct: 30007295 gcgacacatcagtg 30007282 Score = 40.1 bits (20), Expect = 7.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 468 cagacaagcgtatcaggcacattccggtgatc 499 |||| ||||| ||||||||||| ||||||||| Sbjct: 30006091 cagagaagcgcatcaggcacatcccggtgatc 30006060
>gb|AY104325.1| Zea mays PCO141653 mRNA sequence Length = 1167 Score = 155 bits (78), Expect = 2e-34 Identities = 177/210 (84%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||||||||||||||| |||||||| | || ||||||||||| || ||||| || Sbjct: 528 gattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcgac 587 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||||| |||||||| ||||| || ||||||| |||||||| ||| Sbjct: 588 atcatgactgaagagaacaaactgatcacagtgaatcccgacaccaaggtcctgcaggca 647 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatcagcggcgcacagatg 514 |||||||| |||||||| || || |||| ||||| ||||||||| |||| | |||| Sbjct: 648 atgcagctcatgacagaaaaccgcgtcagacacatcccggtgatcgacggcacggggatg 707 Query: 515 atggggatggtctcgattggtgacgtcgtg 544 ||||||||||||| || || ||||||||| Sbjct: 708 ctggggatggtctccatcggcgacgtcgtg 737 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 189 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 248 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 300 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 359 Query: 249 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 308 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 360 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 419 Query: 309 gatagtgtctatgatgctgtcaaatc 334 ||||| |||||||| ||||||||||| Sbjct: 420 gatagcgtctatgacgctgtcaaatc 445
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 141 bits (71), Expect = 3e-30 Identities = 191/231 (82%) Strand = Plus / Plus Query: 105 tcacatggcagtgtactcaaatctgctgtcctccaacacatcagtgttgtgaagcctgct 164 |||||||||||||| || |||| ||||| || ||||||||||| | | || || || Sbjct: 66051 tcacatggcagtgtgcttaaatacgctgttctacaacacatcagcgctcccaaaccagca 66110 Query: 165 atgctgcccgctgtgttcccgcgcttcatgtcagtatcatctgctcaaatagaggagagc 224 ||||| || ||||| || | || ||||||||||| |||||||||| ||||||| || Sbjct: 66111 atgcttcctgctgtcttttctcgtttcatgtcagtttcatctgctcgcctagaggatagt 66170 Query: 225 ggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgga 284 |||||||| | |||||| ||||| | |||||||| ||||||||||||||||||||| Sbjct: 66171 ggatttgaaactgccactgtatcagatgtcttgaagtctaaagggaagagtgctgatgga 66230 Query: 285 tcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatcg 335 || |||||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 66231 tcttggctctggtgcaccacagaggatactgtctatgatgctgtcaaatcg 66281 Score = 77.8 bits (39), Expect = 3e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||||| |||||||| ||||| || |||||| |||||||||||||||||||||||||| Sbjct: 67936 agaacaaactgatcacagtgaaccccaacaccaaagtcctgcaagcaatgcagctgatga 67995 Query: 468 cag 470 ||| Sbjct: 67996 cag 67998 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| |||||||||| |||||||| |||| ||||||||||| || ||||| || Sbjct: 67767 gattatctaaggaaaatcatagtgcagggaagatcttccaagtcaactaaggttggcgac 67826 Query: 395 atcatgac 402 |||||||| Sbjct: 67827 atcatgac 67834 Score = 42.1 bits (21), Expect = 1.9 Identities = 63/77 (81%) Strand = Plus / Plus Query: 468 cagacaagcgtatcaggcacattccggtgatcagcggcgcacagatgatggggatggtct 527 ||||||| || ||||| ||||| |||||||| |||| || |||| |||||||||||| Sbjct: 68080 cagacaaccgcatcagacacatcccggtgattgacggcacagggatgctggggatggtct 68139 Query: 528 cgattggtgacgtcgtg 544 | || || ||||||||| Sbjct: 68140 ccatcggcgacgtcgtg 68156
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 189 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 248 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 135870 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 135929 Query: 249 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 308 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 135930 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 135989 Query: 309 gatagtgtctatgatgctgtcaaatc 334 ||||| |||||||| ||||||||||| Sbjct: 135990 gatagcgtctatgacgctgtcaaatc 136015 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||||||||||||||| |||||||| | || ||||||||||| || ||||| || Sbjct: 137150 gattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcgac 137209 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 137210 atcatgactgaagag 137224 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||||| |||||||| ||||| || ||||||| |||||||| ||||||||||| |||| Sbjct: 137375 agaacaaactgatcacagtgaatcccgacaccaaggtcctgcaggcaatgcagctcatga 137434 Query: 468 cag 470 ||| Sbjct: 137435 cag 137437
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 131 bits (66), Expect = 3e-27 Identities = 126/146 (86%) Strand = Plus / Plus Query: 189 ttcatgtcagtatcatctgctcaaatagaggagagcggatttgagagcagcactgttgca 248 ||||||||||| |||||||||| ||||||| | |||||||| | |||||| ||| Sbjct: 118941 ttcatgtcagtttcatctgctcgcctagaggatcgtggatttgaaactgccactgtagca 119000 Query: 249 gatattttgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagat 308 ||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 119001 gatgtcttgaagtctaaagggaagagtgctgatggatcttggctctggtgcaccacagag 119060 Query: 309 gatagtgtctatgatgctgtcaaatc 334 ||||| |||||||| ||||||||||| Sbjct: 119061 gatagcgtctatgacgctgtcaaatc 119086 Score = 77.8 bits (39), Expect = 3e-11 Identities = 66/75 (88%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||||||||||||||| |||||||| | || ||||||||||| || ||||| || Sbjct: 120221 gattatctccggaaaatcatagtgcagggaaggtcttccaagtcaactaaggttggcgac 120280 Query: 395 atcatgactgaagag 409 ||||||||||||||| Sbjct: 120281 atcatgactgaagag 120295 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 408 agaacaagctgatcacggtgaagcctgacaccagagtcctgcaagcaatgcagctgatga 467 ||||||| |||||||| ||||| || ||||||| |||||||| ||||||||||| |||| Sbjct: 120446 agaacaaactgatcacagtgaatcccgacaccaaggtcctgcaggcaatgcagctcatga 120505 Query: 468 cag 470 ||| Sbjct: 120506 cag 120508 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 120653 gatgctggggatggtctccatcggtgacgtcgtg 120686
>gb|AY681118.1| Citrus limon unknown mRNA Length = 351 Score = 99.6 bits (50), Expect = 9e-18 Identities = 131/158 (82%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 ||||||||| |||| ||||| |||||||| |||| ||||||||||| |||||||| || Sbjct: 73 gattatctcaggaagatcatagtgcagggaagatcatccaagtcaactaaagttggggac 132 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 |||||||||||||||||| |||||||||| | |||||||||| ||| |||| ||| Sbjct: 133 atcatgactgaagagaaccagctgatcacagcttcacctgacaccaaagttctgcgggca 192 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattcc 492 ||||| |||||| ||| || ||||| |||||||||| Sbjct: 193 atgcaattgatgatagataaacgtattcggcacattcc 230
>ref|NM_121124.3| Arabidopsis thaliana unknown protein AT5G10860 mRNA, complete cds Length = 1025 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 465 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 524 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 525 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 584 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 585 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 630 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 364 tttatgatgctgttaaatc 382
>gb|AF361845.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 975 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 465 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 524 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 525 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 584 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 585 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 630 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 304 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 363 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 364 tttatgatgctgttaaatc 382
>gb|AY066046.1| Arabidopsis thaliana AT5g10860/T30N20_130 mRNA, complete cds Length = 621 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 343 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 402 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 403 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 462 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 463 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 508 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 182 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 241 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 242 tttatgatgctgttaaatc 260
>emb|BX832554.1|CNS0A15P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH7ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 979 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 419 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 478 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 479 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 538 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 539 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 584 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 257 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 316 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 317 tttatgatgctgttaaatc 335
>emb|BX832342.1|CNS0A0VO Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH66ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 927 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 406 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 465 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 466 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 525 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 526 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 571 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 245 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 304 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 305 tttatgatgctgttaaatc 323
>emb|BX831340.1|CNS0A0OX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 956 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 440 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 499 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 500 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 559 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 560 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 279 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 338 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 339 tttatgatgctgttaaatc 357
>emb|BX833110.1|CNS0A0JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZF05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 91.7 bits (46), Expect = 2e-15 Identities = 136/166 (81%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 448 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 507 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| ||||| |||| || || |||| ||| ||| || Sbjct: 508 attatgactgaagagaataagcttatcactgtgacaccggagaccaaggtcttgcgtgct 567 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 568 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 613 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 287 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 346 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 347 tttatgatgctgttaaatc 365
>gb|AY389652.1| Hyacinthus orientalis CBS1 mRNA, partial cds Length = 818 Score = 87.7 bits (44), Expect = 4e-14 Identities = 107/128 (83%) Strand = Plus / Plus Query: 371 tccaagtcaaccaaagttggagatatcatgactgaagagaacaagctgatcacggtgaag 430 |||||||||||||| ||||| || ||||||||||||||||| ||||||||||| || | Sbjct: 370 tccaagtcaaccaaggttggggacatcatgactgaagagaataagctgatcaccgtcaca 429 Query: 431 cctgacaccagagtcctgcaagcaatgcagctgatgacagacaagcgtatcaggcacatt 490 || | |||| |||||| || |||||||| ||||||||||| || | ||||| ||||| Sbjct: 430 ccgggtaccaaagtccttcaggcaatgcaactgatgacagataacagaatcagacacatc 489 Query: 491 ccggtgat 498 |||||||| Sbjct: 490 ccggtgat 497 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Plus Query: 228 tttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatggatca 287 ||||| |||| ||| ||| | ||| |||| ||||| ||||| |||||||||||||| || Sbjct: 145 tttgaaagcaccaccgtttcggatgttttaaagtctaaaggcaagagtgctgatggttcc 204 Query: 288 tggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatc 334 ||||| ||||||||||||||||| ||||| |||||||| || ||||| Sbjct: 205 tggctgtggtgcaccacagatgacagtgtttatgatgccgtgaaatc 251
>gb|AF459408.1| Narcissus pseudonarcissus DAFSAG13 senescence-associated putative protein mRNA, partial cds Length = 410 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Plus Query: 224 cggatttgagagcagcactgttgcagatattttgaagtccaaagggaagagtgctgatgg 283 |||||||||||||| ||| ||| |||| |||| || || || || || ||||||||||| Sbjct: 228 cggatttgagagcaccacagtttcagacgttttaaaatcaaagggtaaaagtgctgatgg 287 Query: 284 atcatggctctggtgcaccacagatgatagtgtctatgatgctgtcaaatc 334 ||| ||||| |||||||| ||||| || | ||||||||||||||| ||||| Sbjct: 288 atcttggctttggtgcactacagaggacactgtctatgatgctgtgaaatc 338
>emb|BX831549.1|CNS0A0VJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZE07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 919 Score = 75.8 bits (38), Expect = 1e-10 Identities = 134/166 (80%) Strand = Plus / Plus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||| | ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 416 gattatatacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 475 Query: 395 atcatgactgaagagaacaagctgatcacggtgaagcctgacaccagagtcctgcaagca 454 || |||||||||||||| ||||| || || |||| || || |||| ||| ||| || Sbjct: 476 attatgactgaagagaataagcttataactgtgacaccggagaccaaggtcttgcgtgct 535 Query: 455 atgcagctgatgacagacaagcgtatcaggcacattccggtgatca 500 ||||| ||||||||||| || || |||||||| |||||||| |||| Sbjct: 536 atgcaactgatgacagataaccgaatcaggcatattccggtaatca 581 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 255 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 314 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 315 tttatgatgctgttaaatc 333
>emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome 5, BAC clone T30N20 (ESSA project) Length = 98473 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 37589 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 37530 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 37529 tttatgatgctgttaaatc 37511 Score = 61.9 bits (31), Expect = 2e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 335 gattatctccggaaaatcatcgtgcagggtcgatcctccaagtcaaccaaagttggagat 394 |||||||| ||||| ||||| ||||| || |||| ||||| ||||| ||||||||||| Sbjct: 37263 gattatctacggaagatcattgtgcaagggagatcatccaaatcaacaaaagttggagac 37204 Query: 395 atcatgactgaagag 409 || |||||||||||| Sbjct: 37203 attatgactgaagag 37189
>emb|AJ242648.1|ATH242648 Arabidopsis thaliana CM2 gene for cytosolic chorismate mutase, exons 1-6 Length = 5177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 256 tgaagtccaaagggaagagtgctgatggatcatggctctggtgcaccacagatgatagtg 315 |||| |||||||| || |||||||||||||| ||||| ||||| || || ||||| | || Sbjct: 4850 tgaaatccaaaggcaaaagtgctgatggatcttggctttggtgtactactgatgacactg 4909 Query: 316 tctatgatgctgtcaaatc 334 | ||||||||||| ||||| Sbjct: 4910 tttatgatgctgttaaatc 4928
>gb|AC102014.6| Mus musculus chromosome 1, clone RP24-553D14, complete sequence Length = 142451 Score = 44.1 bits (22), Expect = 0.47 Identities = 22/22 (100%) Strand = Plus / Minus Query: 393 atatcatgactgaagagaacaa 414 |||||||||||||||||||||| Sbjct: 69256 atatcatgactgaagagaacaa 69235
>gb|AY591185.1| Zea mays cultivar p38 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591184.1| Zea mays cultivar n46 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 486 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591183.1| Zea mays cultivar Mo17 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591181.1| Zea mays cultivar k76 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591179.1| Zea mays cultivar k29 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591178.1| Zea mays cultivar j40 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591172.1| Zea mays cultivar g80 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AY591170.1| Zea mays cultivar g42 alcohol dehydrogenase 1 (adh1) gene, partial sequence Length = 487 Score = 44.1 bits (22), Expect = 0.47 Identities = 31/34 (91%) Strand = Plus / Plus Query: 511 gatgatggggatggtctcgattggtgacgtcgtg 544 |||| ||||||||||||| || |||||||||||| Sbjct: 66 gatgctggggatggtctccatcggtgacgtcgtg 99
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete sequence Length = 2105742 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 76 aaatgcagcgagcaattcaag 96 ||||||||||||||||||||| Sbjct: 1152267 aaatgcagcgagcaattcaag 1152247
>emb|BX043922.1|CNS0961Y Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC17AB11 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 913 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 296 gaacaagctgatcacggtgaa 316
>emb|BX041367.1|CNS0942Z Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC12CH04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 940 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 292 gaacaagctgatcacggtgaa 312
>emb|BX039334.1|CNS092II Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1002 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 741 gaacaagctgatcacggtgaa 721
>emb|BX039333.1|CNS092IH Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC1AE07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1064 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 293 gaacaagctgatcacggtgaa 313
>emb|BX023232.1|CNS08Q38 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 766 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 759 gaacaagctgatcacggtgaa 739
>emb|BX023231.1|CNS08Q37 Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA35CB03 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 978 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 279 gaacaagctgatcacggtgaa 299
>emb|BX012270.1|CNS08HMQ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA19CA12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 979 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 277 gaacaagctgatcacggtgaa 297
>ref|XM_309432.2| Anopheles gambiae str. PEST ENSANGP00000011203 (ENSANGG00000008714), partial mRNA Length = 978 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 409 gaacaagctgatcacggtgaa 429 ||||||||||||||||||||| Sbjct: 285 gaacaagctgatcacggtgaa 305
>ref|NM_112224.2| Arabidopsis thaliana RNA binding / ribonuclease III AT3G13740 mRNA, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 284 ctccaagtccaccaaagttggaga 307
>emb|CT025560.9| Mouse DNA sequence from clone RP23-432N22 on chromosome 16, complete sequence Length = 212903 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 ctgtcctccaacacatcagt 149 |||||||||||||||||||| Sbjct: 147714 ctgtcctccaacacatcagt 147733
>emb|AL353771.8| Human DNA sequence from clone RP4-677H15 on chromosome 1p31.3-32.3 Contains gene FLJ20331, two novel genes, the SFRS11 gene for arginine/serine-rich 11 splicing factor and the 3' end of gene DKFZP566D1346, complete sequence Length = 131612 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 tattttgaagtccaaaggga 270 |||||||||||||||||||| Sbjct: 24496 tattttgaagtccaaaggga 24515
>emb|AL157413.18| Human DNA sequence from clone RP11-526K17 on chromosome 20 Contains a novel gene and part of the C20orf39 gene for chromosome 20 open reading frame 39, complete sequence Length = 133207 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 aagtccaaagggaagagtgc 277 |||||||||||||||||||| Sbjct: 126202 aagtccaaagggaagagtgc 126183
>gb|AC100786.2| Homo sapiens chromosome 17, clone CTD-2514K5, complete sequence Length = 177163 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 agcactgttgcagatatttt 256 |||||||||||||||||||| Sbjct: 119062 agcactgttgcagatatttt 119081
>gb|AY072533.1| Arabidopsis thaliana unknown protein (At3g13730; MMM17.16) mRNA, complete cds Length = 774 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 245 ctccaagtccaccaaagttggaga 268
>gb|AF386979.1|AF386979 Arabidopsis thaliana Unknown protein (MMM17.15) mRNA, complete cds Length = 1082 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 284 ctccaagtccaccaaagttggaga 307
>gb|AC087528.15| Homo sapiens chromosome 15, clone RP11-497M17, complete sequence Length = 142965 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 391 agatatcatgactgaagaga 410 |||||||||||||||||||| Sbjct: 70178 agatatcatgactgaagaga 70159
>emb|BX826102.1|CNS0A7K6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZG01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1046 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 255 ctccaagtccaccaaagttggaga 278
>emb|BX825866.1|CNS0A7IM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 886 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 194 ctccaagtccaccaaagttggaga 217
>gb|AY084429.1| Arabidopsis thaliana clone 108144 mRNA, complete sequence Length = 1071 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 283 ctccaagtccaccaaagttggaga 306
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 aagagaacaagctgatcacg 424 |||||||||||||||||||| Sbjct: 5325622 aagagaacaagctgatcacg 5325603
>dbj|AP001307.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMM17 Length = 80733 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 370 ctccaagtcaaccaaagttggaga 393 ||||||||| |||||||||||||| Sbjct: 49572 ctccaagtccaccaaagttggaga 49595
>gb|AC154414.2| Mus musculus BAC clone RP24-231D24 from 16, complete sequence Length = 157232 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 ctgtcctccaacacatcagt 149 |||||||||||||||||||| Sbjct: 62256 ctgtcctccaacacatcagt 62237 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,413,252 Number of Sequences: 3902068 Number of extensions: 4413252 Number of successful extensions: 83334 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83108 Number of HSP's gapped (non-prelim): 207 length of query: 544 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 521 effective length of database: 17,143,297,704 effective search space: 8931658103784 effective search space used: 8931658103784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)