ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdp13
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AKR1_CANAL (Q5AL27) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Anky... 28 5.2

>AKR1_CANAL (Q5AL27) Palmitoyltransferase AKR1 (EC 2.3.1.-) (Ankyrin|
           repeat-containing protein AKR1)
          Length = 813

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = +2

Query: 14  YSLRSCHFHLKVDRWPLFQSFVLWCKCSVNTSCPW*ETKGLFSW 145
           Y  ++ HFH  V  W LFQ   +   C V T   +   KGL +W
Sbjct: 632 YGYKNHHFHFNVFMWDLFQCVWVSFLCIVQT---FQILKGLTTW 672


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,551,750
Number of Sequences: 219361
Number of extensions: 286126
Number of successful extensions: 668
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 661
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 668
length of database: 80,573,946
effective HSP length: 31
effective length of database: 73,773,755
effective search space used: 1770570120
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top