>PSBD_PROHO (P51766) Photosystem II D2 protein (Photosystem Q(A) protein) (PSII|
           D2 protein)
          Length = 351

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +3

Query: 15  WGASSEGGIVVWIDLXPIWLWSSMSHAHA 101
           WG  ++G  V W+ L  +W ++++  A A
Sbjct: 92  WGPEAQGAFVRWVQLGGLWTFTALHGAFA 120


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,763,604
Number of Sequences: 219361
Number of extensions: 476899
Number of successful extensions: 1513
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1510
length of database: 80,573,946
effective HSP length: 24
effective length of database: 75,309,282
effective search space used: 1807422768
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)