ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdp10 |
|---|---|
| Clone Library Name | barley_pub |
>GRPA_MEDFA (Q09134) Abscisic acid and environmental stress-inducible protein| Length = 159 Score = 45.4 bits (106), Expect = 1e-04 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 5/70 (7%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDR-----SSGRGGYNKSTGDDEYSGAGYKKS 315 GY+ GGYN G ++ G +G Y+ ++G GGYN G G GY Sbjct: 52 GYNHGGGGYNNGGGYNHGGGGYNNGGGGYNHGGGGYNNGGGGYNHGGGGYNNGGGGYNHG 111 Query: 316 GGDEYDSGYN 345 GG GYN Sbjct: 112 GGGYNGGGYN 121 Score = 31.6 bits (70), Expect = 1.6 Identities = 25/80 (31%), Positives = 31/80 (38%) Frame = +1 Query: 136 KTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 KT+ + GGYN G GY G GGYN G + + G GY Sbjct: 28 KTNEVNDAKYGGGYNHGGGGYNGGGYNHGG----------GGYNNGGGYN-HGGGGYNNG 76 Query: 316 GGDEYDSGYNKASNEDYGRN 375 GG Y+ G +N G N Sbjct: 77 GG-GYNHGGGGYNNGGGGYN 95
>C11BB_BACTV (Q9ZIU5) Pesticidal crystal protein cry11Bb (Insecticidal| delta-endotoxin CryXIB(b)) (Crystaline entomocidal protoxin) (84 kDa crystal protein) Length = 750 Score = 44.7 bits (104), Expect = 2e-04 Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 5/88 (5%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRG---GYNKSTGDDEYSG-- 297 N TS+ GY++ GYN + ++ +GY++ D+Y++++ G GYN + + SG Sbjct: 664 NNTSS-GYEQ---GYNDNYNQNTSSGYEQGYNDNYNQNTSSGYEQGYNDNYNQNTSSGYE 719 Query: 298 AGYKKSGGDEYDSGYNKASNEDYGRNKS 381 GY + SGY + N++Y +N S Sbjct: 720 QGYNDNYNQNTSSGYEQGYNDNYNQNTS 747
>EGGS_SCHMA (P08016) Putative eggshell protein (Fragment)| Length = 149 Score = 43.9 bits (102), Expect = 3e-04 Identities = 28/69 (40%), Positives = 36/69 (52%) Frame = +1 Query: 172 GYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKA 351 GY+K G + Y GY K G D Y GY+K + Y GY K G ++Y GY+K Sbjct: 2 GYDKYGYDKY--GYDKYGYDKY-------GYDKYGYEKGYDKYGYDKYGYEKY--GYDKY 50 Query: 352 SNEDYGRNK 378 NE YG +K Sbjct: 51 GNEKYGYDK 59 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 8/81 (9%) Frame = +1 Query: 151 GYDRR--EGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDD------EYSGAGY 306 GYD+ E GY+K G + Y GY+K G D Y + GY+K GDD +Y GY Sbjct: 22 GYDKYGYEKGYDKYGYDKY--GYEKYGYDKYGNE--KYGYDKY-GDDKHGHGKDYEKYGY 76 Query: 307 KKSGGDEYDSGYNKASNEDYG 369 K Y Y K DYG Sbjct: 77 TKEYSKNYKDYYKKYDKYDYG 97
>ERF2_PICPI (P23637) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) (Omnipotent suppressor protein 2) Length = 741 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 2/84 (2%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKK 312 N + GY GGYN S Y S + Y+ +S +GGY S ++ Y+ Y Sbjct: 78 NYNNRGGYSNNRGGYNNSNRGGY------SNYNSYNTNSNQGGY--SNYNNNYANNSYNN 129 Query: 313 SG--GDEYDSGYNKASNEDYGRNK 378 + + Y+ GYN +++ G+++ Sbjct: 130 NNNYNNNYNQGYNNYNSQPQGQDQ 153 Score = 31.2 bits (69), Expect = 2.1 Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 1/75 (1%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGY-NKSTGDDEYSGAGYKKSGGDEY 330 Y +++ YN+ G +Y+ S +S RGGY N ++ + + GY + Sbjct: 64 YGQQQQNYNQGGYNNYNNRGGYSNNRGGYNNSNRGGYSNYNSYNTNSNQGGYSNYNNNYA 123 Query: 331 DSGYNKASNEDYGRN 375 ++ YN +N +Y N Sbjct: 124 NNSYN--NNNNYNNN 136
>DDR48_YEAST (P18899) Stress protein DDR48 (DNA damage-responsive protein 48)| (DDRP 48) (YP 75) (Flocculent-specific protein) Length = 429 Score = 37.7 bits (86), Expect = 0.023 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 1/80 (1%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKK 312 N + G Y + + Y + K + Y SS Y S DD Y + KK Sbjct: 251 NNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSS--YGSSSNDDSYGSSNNDDSYGSSNKKK 308 Query: 313 SG-GDEYDSGYNKASNEDYG 369 S G D Y +++ YG Sbjct: 309 SSYGSNNDDSYGSNNDDSYG 328 Score = 34.3 bits (77), Expect = 0.25 Identities = 17/66 (25%), Positives = 26/66 (39%) Frame = +1 Query: 178 NKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASN 357 N S + + Y + D Y S+ + S DD Y + S G + Y +N Sbjct: 100 NDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNN 159 Query: 358 EDYGRN 375 + YG N Sbjct: 160 DSYGSN 165 Score = 33.1 bits (74), Expect = 0.56 Identities = 18/53 (33%), Positives = 24/53 (45%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEY 291 N + D G N++ + Y S DD SS RGG N+ GDD+Y Sbjct: 377 NDSYGSNNDDSYGSSNRNKNSYGSSNYGSSNNDDSYGSSNRGGRNQYGGDDDY 429 Score = 32.7 bits (73), Expect = 0.73 Identities = 24/102 (23%), Positives = 33/102 (32%), Gaps = 21/102 (20%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKST------------ 276 N + G Y + + Y + S + D S G NKS+ Sbjct: 132 NNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSN 191 Query: 277 GDDEYSGAGYKKSG---------GDEYDSGYNKASNEDYGRN 375 DD Y + KKS G D Y +N+ YG N Sbjct: 192 NDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSN 233 Score = 31.6 bits (70), Expect = 1.6 Identities = 28/86 (32%), Positives = 33/86 (38%), Gaps = 13/86 (15%) Frame = +1 Query: 157 DRREGGYNK---SGAEDYDTGYKKSGTDDYDRS----SGRGGYNK----STGDDEYSGAG 303 D G NK S + D Y + D Y S S G N S DD Y + Sbjct: 298 DDSYGSSNKKKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSN 357 Query: 304 YKKSG-GDEYDSGYNKASNED-YGRN 375 KKS G D Y ++N D YG N Sbjct: 358 KKKSSYGSNNDDSYGSSNNNDSYGSN 383 Score = 31.2 bits (69), Expect = 2.1 Identities = 27/94 (28%), Positives = 35/94 (37%), Gaps = 13/94 (13%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKS----GAEDYDTGYKKSGTDDYDRSSGR-----GGYNK----S 273 N + D G NK+ G+ D Y S DD SS + G N S Sbjct: 262 NDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYGS 321 Query: 274 TGDDEYSGAGYKKSGGDEYDSGYNKASNEDYGRN 375 DD Y + KK S Y ++N+ YG N Sbjct: 322 NNDDSYGSSNKKK-------SSYGSSNNDSYGSN 348
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 37.4 bits (85), Expect = 0.029 Identities = 25/79 (31%), Positives = 30/79 (37%), Gaps = 1/79 (1%) Frame = +1 Query: 145 NEGYDR-REGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 N GY R + Y G Y GY ++ Y GGY G Y G GY GG Sbjct: 4 NGGYQRDQRDSYRNGGGGGYSNGYSNGNSNGYSGGGSGGGYGGGYGGGGY-GGGYGGRGG 62 Query: 322 DEYDSGYNKASNEDYGRNK 378 G ++ SN G K Sbjct: 63 GA--GGGDRMSNLGAGLKK 79 Score = 30.4 bits (67), Expect = 3.6 Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%) Frame = +1 Query: 199 YDTGYKKSGTDDYDRSSGRGGYNK--STGDDE-YSGAGYKKSGGDEYDSGY 342 Y+ GY++ D Y R+ G GGY+ S G+ YSG G SGG Y GY Sbjct: 3 YNGGYQRDQRDSY-RNGGGGGYSNGYSNGNSNGYSGGG---SGGG-YGGGY 48
>ROAB_ARTSA (P80350) Heterogeneous nuclear ribonucleoprotein A/B (P38)| (Fragments) Length = 195 Score = 37.0 bits (84), Expect = 0.038 Identities = 22/45 (48%), Positives = 22/45 (48%), Gaps = 3/45 (6%) Frame = +1 Query: 250 GRGGYNKSTGDDEYSGAGYKKSG---GDEYDSGYNKASNEDYGRN 375 G GGY GDD Y GAGY G G Y SGY E YG N Sbjct: 142 GYGGYGGGYGDDAYGGAGYDYYGSGYGGGYGSGY-----EGYGYN 181
>VLPB_MYCHR (P29229) Variant surface antigen B precursor (VLPB prolipoprotein)| Length = 174 Score = 37.0 bits (84), Expect = 0.038 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 G D ++ G +G++ D+G K +G+D D + K TG D +G K +G D Sbjct: 114 GSDSQDSGAKGTGSDSQDSGAKGTGSDSQDSGA------KGTGSDS-QDSGAKGTGSDSQ 166 Query: 331 DSG 339 DSG Sbjct: 167 DSG 169 Score = 37.0 bits (84), Expect = 0.038 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 G D ++ G +G++ D+G K +G+D D + K TG D +G K +G D Sbjct: 102 GSDSQDSGAKGTGSDSQDSGAKGTGSDSQDSGA------KGTGSDS-QDSGAKGTGSDSQ 154 Query: 331 DSG 339 DSG Sbjct: 155 DSG 157 Score = 37.0 bits (84), Expect = 0.038 Identities = 21/63 (33%), Positives = 32/63 (50%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 G D ++ G +G++ D+G K +G+D D + K TG D +G K +G D Sbjct: 90 GSDSQDSGAKGTGSDSQDSGAKGTGSDSQDSGA------KGTGSDS-QDSGAKGTGSDSQ 142 Query: 331 DSG 339 DSG Sbjct: 143 DSG 145 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/57 (35%), Positives = 29/57 (50%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSG 339 GG +G++ D+G K +G+D D + K TG D +G K +G D DSG Sbjct: 84 GGQTGTGSDSQDSGAKGTGSDSQDSGA------KGTGSDS-QDSGAKGTGSDSQDSG 133
>FIBH_BOMMO (P05790) Fibroin heavy chain precursor (Fib-H) (H-fibroin)| Length = 5263 Score = 36.6 bits (83), Expect = 0.050 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 5/81 (6%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRG-----GYNKSTGDDEYSGAGY 306 +N GY R +G Y + + D+ TG SG G G G +GAGY Sbjct: 683 ANGGYSRSDG-YEYAWSSDFGTGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGY 741 Query: 307 KKSGGDEYDSGYNKASNEDYG 369 G Y +GY + YG Sbjct: 742 GAGVGVGYGAGYGAGAGAGYG 762 Score = 34.3 bits (77), Expect = 0.25 Identities = 19/66 (28%), Positives = 23/66 (34%) Frame = +1 Query: 172 GYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKA 351 GY Y GY Y +G G G +GAGY G Y +GY Sbjct: 2061 GYGAGVGAGYGAGYGAGAGAGYGAGAGSGA-GSGAGAGSGAGAGYGAGAGAGYGAGYGAG 2119 Query: 352 SNEDYG 369 + YG Sbjct: 2120 AGAGYG 2125 Score = 33.1 bits (74), Expect = 0.56 Identities = 21/67 (31%), Positives = 26/67 (38%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNK 348 G Y G Y+ Y S D+ SG G G +GAGY G Y +GY Sbjct: 4187 GPYVNGGYSGYE--YAWSSESDFGTGSGAGA-GSGAGAGSGAGAGYGAGVGAGYGAGYGA 4243 Query: 349 ASNEDYG 369 + YG Sbjct: 4244 GAGAGYG 4250 Score = 32.3 bits (72), Expect = 0.95 Identities = 23/76 (30%), Positives = 28/76 (36%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 +N GY E Y S D+ TG SG G G +GAGY G Sbjct: 2621 ANGGYSGYE--YAWSSESDFGTGSGAGAGSGAGAGSGAGA-GSGAGAGSGAGAGYGAGVG 2677 Query: 322 DEYDSGYNKASNEDYG 369 Y +GY + YG Sbjct: 2678 AGYGAGYGAGAGAGYG 2693 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Frame = +1 Query: 205 TGYKKSGTDDYDRSSGRG-GYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYG 369 +GY+ + + + D +G G G G +GAGY G Y +GY + YG Sbjct: 4542 SGYEYAWSSESDFGTGSGAGAGSGAGAGSGAGAGYGAGVGAGYGAGYGAGAGAGYG 4597 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 5/72 (6%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRG-----GYNKSTGDDEYSGAGYKKSGGDEYD 333 GGY SG E Y S D+ SG G G G +GAGY G Y Sbjct: 2304 GGY--SGYE-----YAWSSESDFGTGSGAGAGSGAGAGAGAGAGSGAGAGYGAGVGAGYG 2356 Query: 334 SGYNKASNEDYG 369 +GY + YG Sbjct: 2357 AGYGAGAGAGYG 2368 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/70 (34%), Positives = 28/70 (40%), Gaps = 3/70 (4%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRG---GYNKSTGDDEYSGAGYKKSGGDEYDSG 339 GGY SG E Y S D+ SG G G +G SGAG G Y +G Sbjct: 1642 GGY--SGYE-----YAWSSESDFGTGSGAGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAG 1694 Query: 340 YNKASNEDYG 369 Y + YG Sbjct: 1695 YGAGAGAGYG 1704 Score = 31.2 bits (69), Expect = 2.1 Identities = 23/73 (31%), Positives = 28/73 (38%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 GY E Y S D+ TG SG + G +G SGAGY G Y Sbjct: 1240 GYSGYE--YAWSSESDFGTG---SGAGAGSGAGAGSGAGAGSGAGAGSGAGYGAGVGAGY 1294 Query: 331 DSGYNKASNEDYG 369 +GY + YG Sbjct: 1295 GAGYGAGAGAGYG 1307 Score = 29.6 bits (65), Expect = 6.1 Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 3/60 (5%) Frame = +1 Query: 172 GYNKSGAEDYDTGYKKSGTDDYDRSSGRG---GYNKSTGDDEYSGAGYKKSGGDEYDSGY 342 GY Y GY Y +G G G +G SGAG G Y +GY Sbjct: 2211 GYGAGAGAGYGAGYGAGAGAGYGAGAGSGAGSGAGAGSGAGAGSGAGAGSGAGAGYGAGY 2270
>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 35.8 bits (81), Expect = 0.086 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 10/81 (12%) Frame = +1 Query: 163 REGG---YNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKS-TGDDEYSGAGYKKSGGDEY 330 R GG Y+ G+ DYD GY D SGR + DD+Y G GGD Y Sbjct: 251 RYGGRDRYDDRGSRDYDRGY------DSRIGSGRRAFGSGYRRDDDYRG------GGDRY 298 Query: 331 DSGYNK------ASNEDYGRN 375 + Y++ +S +DY R+ Sbjct: 299 EDRYDRRDDRSWSSRDDYSRD 319
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 35.8 bits (81), Expect = 0.086 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 10/81 (12%) Frame = +1 Query: 163 REGG---YNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKS-TGDDEYSGAGYKKSGGDEY 330 R GG Y+ G+ DYD GY D SGR + DD+Y G GGD Y Sbjct: 251 RYGGRDRYDDRGSRDYDRGY------DSRIGSGRRAFGSGYRRDDDYRG------GGDRY 298 Query: 331 DSGYNK------ASNEDYGRN 375 + Y++ +S +DY R+ Sbjct: 299 EDRYDRRDDRSWSSRDDYSRD 319
>SIAL_PIG (P31936) Bone sialoprotein-2 (Bone sialoprotein II) (BSP II)| (Cell-binding sialoprotein) (Integrin-binding sialoprotein) Length = 300 Score = 35.0 bits (79), Expect = 0.15 Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%) Frame = +1 Query: 136 KTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGR-GGYNKSTGDDEYS---GAG 303 KT+ Y EG Y ++GA +YD GY + Y+ +G G + +DEYS G Sbjct: 239 KTTTPEY---EGEYEQTGAHEYDNGY-----EIYESENGEPRGDSYRAYEDEYSYYKGRS 290 Query: 304 YKKSGGDEY 330 Y GG +Y Sbjct: 291 YNSYGGHDY 299
>SIAL_HUMAN (P21815) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP| II) (Cell-binding sialoprotein) (Integrin-binding sialoprotein) Length = 317 Score = 35.0 bits (79), Expect = 0.15 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 4/59 (6%) Frame = +1 Query: 166 EGGYNKSGAEDYDTGYKKSGTDDYDRSSGR-GGYNKSTGDDEYS---GAGYKKSGGDEY 330 EG Y +GA DYD GY + Y+ +G G N +DEYS G GY G Y Sbjct: 260 EGEYEYTGANDYDNGY-----EIYESENGEPRGDNYRAYEDEYSYFKGQGYDGYDGQNY 313
>GRP1_SINAL (P49310) Glycine-rich RNA-binding protein GRP1A| Length = 166 Score = 35.0 bits (79), Expect = 0.15 Identities = 22/57 (38%), Positives = 22/57 (38%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 GY GGY G E GY G R G GGY D G GY SGG Sbjct: 109 GYGGGGGGYGGGGREG---GYSGGGGGYSSRGGGGGGYGGGGRRDGGEGGGYGGSGG 162 Score = 32.3 bits (72), Expect = 0.95 Identities = 26/79 (32%), Positives = 28/79 (35%), Gaps = 2/79 (2%) Frame = +1 Query: 139 TSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAG--YKK 312 T NE R GG G GY+ G Y G GGY + YSG G Y Sbjct: 80 TVNEAQSRGSGG--GGGGRGGGGGYRSGGGGGY--GGGGGGYGGGGREGGYSGGGGGYSS 135 Query: 313 SGGDEYDSGYNKASNEDYG 369 GG GY D G Sbjct: 136 RGGG--GGGYGGGGRRDGG 152
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 35.0 bits (79), Expect = 0.15 Identities = 25/74 (33%), Positives = 34/74 (45%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 Y+ +E GYN G Y GY+ ++Y R GRGG+N GA Y G D+ Sbjct: 12 YNGKEDGYNSRGR--YGGGYR----NNYSRGGGRGGFN--------DGASY---GYDQRG 54 Query: 334 SGYNKASNEDYGRN 375 G N ++ G N Sbjct: 55 QGRNFYESDGPGAN 68
>LGE1_ASHGO (Q75A59) Transcriptional regulatory protein LGE1| Length = 244 Score = 35.0 bits (79), Expect = 0.15 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%) Frame = +1 Query: 193 EDYDTGYKKS-GTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYG 369 + + GY ++ G++ Y + GRGGY + +G Y G GY GG Y G+ N +G Sbjct: 53 QPHSQGYARAEGSNGYRQPYGRGGY-RGSGGRYYGGYGYGHGGGG-YGYGHGGGGNYGHG 110 Query: 370 RN 375 + Sbjct: 111 HH 112
>GRP9_DAUCA (P37703) Glycine-rich protein DC9.1| Length = 144 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/85 (30%), Positives = 31/85 (36%), Gaps = 5/85 (5%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRS----SGRGGYNKSTGDDEYSG 297 E EGY+ G +N G + GY G Y+ +G GGYN G G Sbjct: 30 ETAAKTEGYNNGGGYHNGGGGYNNGGGYHNGG-GGYNNGGGYHNGGGGYNNG-GGYHNGG 87 Query: 298 AGYKKSGGDEY-DSGYNKASNEDYG 369 GY GG GYN G Sbjct: 88 GGYNNGGGHHNGGGGYNNGGGHHGG 112
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 34.7 bits (78), Expect = 0.19 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 2/60 (3%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYS--GAGYKKSGGD 324 GY R GGY G Y GY G G GG G D G+G KK D Sbjct: 34 GYGGRGGGYGGGGGSGYGGGYGGGGYGGGGYGRGGGGAGAGAGGDRMGNLGSGLKKQDWD 93 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/63 (33%), Positives = 22/63 (34%), Gaps = 6/63 (9%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDY-DRSSGRG-----GYNKSTGDDEYSGAGYKK 312 GY R Y G Y GY Y R G G GY G Y G GY + Sbjct: 9 GYQR--DSYRSGGGGGYSNGYSNGHGGGYGGRGGGYGGGGGSGYGGGYGGGGYGGGGYGR 66 Query: 313 SGG 321 GG Sbjct: 67 GGG 69
>CORA_MEDSA (Q07202) Cold and drought-regulated protein CORA| Length = 204 Score = 34.7 bits (78), Expect = 0.19 Identities = 21/57 (36%), Positives = 22/57 (38%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 GY GGYN G GY G G GGYN G + G GY GG Sbjct: 77 GYHNGGGGYNHGGG-----GYNGGGGHG---GHGGGGYNGGGGHGGHGGGGYNGGGG 125 Score = 33.1 bits (74), Expect = 0.56 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Frame = +1 Query: 145 NEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRS----SGRGGYNKSTGDDEYSGAGYKK 312 N G GGYN G ++ G +G Y+ +G GG+ G G G+ Sbjct: 55 NHGGGYNGGGYNHGGGYNHGGGGYHNGGGGYNHGGGGYNGGGGHGGHGGGGYNGGGGHGG 114 Query: 313 SGGDEYDSG 339 GG Y+ G Sbjct: 115 HGGGGYNGG 123 Score = 32.7 bits (73), Expect = 0.73 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 2/72 (2%) Frame = +1 Query: 136 KTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 KT+ + GGYN G + GY G ++ G GGY+ G + G GY Sbjct: 41 KTNEVNDAKYGGGYNHGGGYN-GGGYNHGGGYNH----GGGGYHNGGGGYNHGGGGYNGG 95 Query: 316 G--GDEYDSGYN 345 G G GYN Sbjct: 96 GGHGGHGGGGYN 107
>CIRBP_XENLA (O93235) Cold-inducible RNA-binding protein (Glycine-rich| RNA-binding protein CIRP) (xCIRP) Length = 163 Score = 34.7 bits (78), Expect = 0.19 Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Frame = +1 Query: 163 REGGYN--KSGAEDYDTGYKKSGTDDYDRSSGR-----GGYNKSTGDDEYSGAGYKKSGG 321 R GGY SG + G + G D S R GGY S+G +Y G+G + Sbjct: 88 RRGGYRGGSSGGRGFFRGGRGRGGGDRGYGSSRFDNRSGGYGGSSGSRDYYGSGRSQGSY 147 Query: 322 DEYDSGYNKASNEDYG 369 + G + S + YG Sbjct: 148 GDRSGGSYRDSYDSYG 163
>C20AA_BACUF (O32321) Pesticidal crystal protein cry20Aa (Insecticidal| delta-endotoxin CryXXA(a)) (Crystaline entomocidal protoxin) (86 kDa crystal protein) Length = 753 Score = 34.7 bits (78), Expect = 0.19 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTG---DDEYSGAGYKKSGGD 324 Y YN++ + YD GY + +D YD+S Y+++T D Y Y + G Sbjct: 683 YQPSYDNYNQNASGTYDDGYNPNASDSYDQSY-TNNYSQNTNSMYDQGYYNNNYDQHSGC 741 Query: 325 EYDSGYN 345 + GY+ Sbjct: 742 TCNQGYD 748
>ROA1_XENLA (P17130) Heterogeneous nuclear ribonucleoproteins A1 homolog (hnRNP| A1) (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 365 Score = 34.7 bits (78), Expect = 0.19 Identities = 24/79 (30%), Positives = 31/79 (39%), Gaps = 1/79 (1%) Frame = +1 Query: 145 NEGYDRREGG-YNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 N GY +GG Y Y G + G Y + G GYN SG + SGG Sbjct: 256 NRGYGAGQGGGYGAGQGGGYGGGGQGGG---YGGNGGYDGYNGGGSGFSGSGGNFGSSGG 312 Query: 322 DEYDSGYNKASNEDYGRNK 378 YN S+ ++G K Sbjct: 313 YNDFGNYNSQSSSNFGPMK 331
>GRP1_CHERU (P11898) Glycine-rich protein HC1| Length = 144 Score = 34.3 bits (77), Expect = 0.25 Identities = 25/77 (32%), Positives = 30/77 (38%), Gaps = 5/77 (6%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRS----SGRGGYNKSTGDDEYSG 297 E EGY+ G +N G + GY G Y+ +G GGYN G G Sbjct: 30 ETAAKTEGYNNGGGYHNGGGGYNNGGGYHNGG-GGYNNGGGYHNGGGGYNNG-GGYHNGG 87 Query: 298 AGYKKSGGDEY-DSGYN 345 GY GG GYN Sbjct: 88 GGYNNGGGHHNGGGGYN 104
>ZN330_DROME (Q9VAU9) Zinc finger protein 330 homolog (Nucleolar autoantigen 36| homolog) Length = 315 Score = 34.3 bits (77), Expect = 0.25 Identities = 23/75 (30%), Positives = 32/75 (42%) Frame = +1 Query: 139 TSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSG 318 T + + R++ G N E Y GY +G Y + GGY+ DDE Sbjct: 228 TRSHKFGRQQQGGNSDDEEGYG-GYYGAGGSGYYGGAASGGYSYGGDDDE---------- 276 Query: 319 GDEYDSGYNKASNED 363 DE D Y+ S+ED Sbjct: 277 -DESDGDYDDESDED 290
>GRP7_ARATH (Q03250) Glycine-rich RNA-binding protein 7| Length = 176 Score = 34.3 bits (77), Expect = 0.25 Identities = 24/67 (35%), Positives = 28/67 (41%) Frame = +1 Query: 139 TSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSG 318 T NE R GG G++ G Y RS G GGY S G Y G G ++ G Sbjct: 80 TVNEAQSRGSGGGG---------GHRGGGGGGY-RSGGGGGY--SGGGGSYGGGGGRREG 127 Query: 319 GDEYDSG 339 G Y G Sbjct: 128 GGGYSGG 134 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/75 (29%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Frame = +1 Query: 169 GGYNKSGAEDYD--------TGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 GGY G Y G ++ G Y S G GGY+ G G G ++ GG Sbjct: 101 GGYRSGGGGGYSGGGGSYGGGGGRREGGGGY--SGGGGGYSSRGGGGGSYGGGRREGGG- 157 Query: 325 EYDSGYNKASNEDYG 369 GY YG Sbjct: 158 ----GYGGGEGGGYG 168
>GRP8_ARATH (Q03251) Glycine-rich RNA-binding protein 8 (CCR1 protein)| Length = 169 Score = 33.9 bits (76), Expect = 0.33 Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 4/55 (7%) Frame = +1 Query: 169 GGYNKSGAEDYDTG----YKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 GGY G Y G Y G Y+R SG G G Y G G ++ GG Sbjct: 99 GGYRSGGGGGYSGGGGGGYSGGGGGGYERRSGGYGSGGGGGGRGYGGGGRREGGG 153 Score = 29.3 bits (64), Expect = 8.0 Identities = 23/77 (29%), Positives = 27/77 (35%) Frame = +1 Query: 139 TSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSG 318 T NE R GG G GY+ G Y G GGY+ G +G SG Sbjct: 78 TVNEAQSRGSGG-GGGGRGGSGGGYRSGGGGGYS-GGGGGGYSGGGGGGYERRSGGYGSG 135 Query: 319 GDEYDSGYNKASNEDYG 369 G GY + G Sbjct: 136 GGGGGRGYGGGGRREGG 152
>FUS_HUMAN (P35637) RNA-binding protein FUS (Oncogene FUS) (Oncogene TLS)| (Translocated in liposarcoma protein) (POMp75) (75 kDa DNA-pairing protein) Length = 526 Score = 33.9 bits (76), Expect = 0.33 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Frame = +1 Query: 142 SNEGYDRRE--GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 S GY ++ GG G D G + G G GGYN+S+G E G G + Sbjct: 190 SGGGYGNQDQSGGGGSGGYGQQDRGGRGRGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRG 249 Query: 316 G----GDEYDSGYNK 348 G G G+NK Sbjct: 250 GRGGMGGSDRGGFNK 264
>RO21_XENLA (P51989) Heterogeneous nuclear ribonucleoprotein A2 homolog 1| (hnRNP A2(A)) Length = 346 Score = 33.9 bits (76), Expect = 0.33 Identities = 27/96 (28%), Positives = 36/96 (37%), Gaps = 17/96 (17%) Frame = +1 Query: 133 NKTSNEGYDRREGGYN---------KSGAEDYD--TGYKKSGTDDYDRSSGRG------G 261 N+ N G+ GG N + G++ Y GY +G + Y G G Sbjct: 190 NRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNGYGGGQGGGNYGGGPS 249 Query: 262 YNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYG 369 Y G GAGY GG Y GY+ +YG Sbjct: 250 YGGGRGGGYGGGAGYGNQGGG-YGGGYDNYGGGNYG 284 Score = 32.3 bits (72), Expect = 0.95 Identities = 24/77 (31%), Positives = 29/77 (37%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 GY +GG N G Y G + G G G G D Y G Y GG+ Sbjct: 234 GYGGGQGGGNYGGGPSYGGG--RGGGYGGGAGYGNQGGGYGGGYDNYGGGNY-GGGGNYN 290 Query: 331 DSGYNKASNEDYGRNKS 381 D G + +YG KS Sbjct: 291 DFGNYNQQSSNYGPMKS 307 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 5/63 (7%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYD--RSSGRGGYNKSTGDDEYSGAGY---KKS 315 GYD GG G D G + +Y +S G G N+S G Y G Y S Sbjct: 274 GYDNYGGGNYGGGGNYNDFGNYNQQSSNYGPMKSGGNFGGNRSMGGGPYGGGNYGPGNAS 333 Query: 316 GGD 324 GG+ Sbjct: 334 GGN 336
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 33.9 bits (76), Expect = 0.33 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSG-AGYKKSG 318 +N GY+ R GG G Y G + G D Y GGY GD + G G + SG Sbjct: 4 NNGGYNNRNGGSYGGG---YGGGGSRGGRDGYSGGGRGGGY--GGGDRDQGGYRGGRFSG 58 Query: 319 GDEYDSGYNKASNED 363 G +N A ++ Sbjct: 59 GGRGGGRFNDAPRQE 73
>DHX9_MOUSE (O70133) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) (mHEL-5) Length = 1380 Score = 33.1 bits (74), Expect = 0.56 Identities = 27/84 (32%), Positives = 32/84 (38%), Gaps = 20/84 (23%) Frame = +1 Query: 151 GYDRREGGYNKSG---AEDYDT--------------GYKKSGTDDYDRSSGRGGYNKSTG 279 GY GGY G E Y GY+ Y + G G Y S+G Sbjct: 1285 GYGGGSGGYGGGGYGGGEGYSISPNSYRGNYGGGGGGYRGGSQGGYRNNFG-GDYRGSSG 1343 Query: 280 DDEYSGAGYKKSGGDE---YDSGY 342 D SG GY+ SGG + Y GY Sbjct: 1344 DYRGSGGGYRGSGGFQRRGYGGGY 1367
>K0552_HUMAN (O60299) Protein KIAA0552| Length = 673 Score = 33.1 bits (74), Expect = 0.56 Identities = 19/63 (30%), Positives = 28/63 (44%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKK 312 N+ Y GG + G+ GY+ GT D R+S + G + S G + G+G Sbjct: 249 NRIGTASYGSGSGGSSGGGS-----GYQDLGTSDSGRASSKSGSSSSMGRPGHLGSGEGG 303 Query: 313 SGG 321 GG Sbjct: 304 GGG 306
>SWC5_YEAST (P38326) SWR1-complex protein 5| Length = 303 Score = 32.7 bits (73), Expect = 0.73 Identities = 26/78 (33%), Positives = 31/78 (39%) Frame = +1 Query: 145 NEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 NE D E GY + ED+ K G GG + S D GGD Sbjct: 11 NEKEDEDEDGYIEEEDEDFQPEKDKLG----------GGSDDSDASD----------GGD 50 Query: 325 EYDSGYNKASNEDYGRNK 378 +YD G N+ D GRNK Sbjct: 51 DYDDGVNR----DKGRNK 64
>C27AA_BACUH (Q9S597) Pesticidal crystal protein cry27Aa (Insecticidal| delta-endotoxin CryXXVIIA(a)) (Crystaline entomocidal protoxin) (94 kDa crystal protein) Length = 826 Score = 32.3 bits (72), Expect = 0.95 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%) Frame = +1 Query: 133 NKTSN--EGYDRREGGYNKSGA---EDYDTGYKKSGTDDYDRSSGR--GGYNKSTGDDEY 291 N+TS YD+ YN++ ++ DT Y+ + + SSG YN++ D Sbjct: 687 NQTSEGYNTYDQNTNSYNQNYNNYNQNMDTTYQPNYDNYKQNSSGMYDNPYNQNPKDS-- 744 Query: 292 SGAGYKKSGGDEYDSGYNKASN 357 Y ++ D YDSGYN + N Sbjct: 745 ----YNQNYTDTYDSGYNNSQN 762
>VG48_SHV21 (Q01033) Hypothetical gene 48 protein| Length = 797 Score = 32.3 bits (72), Expect = 0.95 Identities = 23/83 (27%), Positives = 35/83 (42%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYK 309 E++ +EG D EG G E D G + +D G G G+DE Sbjct: 442 EDEGEDEGED--EGDEGDEGDEGEDEGEDEDDEEDEGEDEGDEG---DEGEDEGDEGDEG 496 Query: 310 KSGGDEYDSGYNKASNEDYGRNK 378 + GDE D G ++ D G+++ Sbjct: 497 EDEGDEGDEGKDEGDEGDEGKDE 519 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 4/84 (4%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKS--GAEDYDTGYKKS--GTDDYDRSSGRGGYNKSTGDDEYSG 297 E +EG D + G ++ G ++ D G + G D+ D G + GD+ G Sbjct: 608 EGDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGEDEGDEGDEG 667 Query: 298 AGYKKSGGDEYDSGYNKASNEDYG 369 G DE D G ++ D G Sbjct: 668 EDEGDEGEDEGDEGEDEGDEGDEG 691 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/83 (22%), Positives = 33/83 (39%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYK 309 E EG D + G ++ E D G + D+ + + G+DE Sbjct: 427 EKDEKEEGEDEGDDGEDEGEDEGEDEGDEGDEGDEGEDEGEDEDDEEDEGEDEGDEGDEG 486 Query: 310 KSGGDEYDSGYNKASNEDYGRNK 378 + GDE D G ++ D G+++ Sbjct: 487 EDEGDEGDEGEDEGDEGDEGKDE 509
>LSB3_YEAST (P43603) LAS seventeen-binding protein 3 (LAS17-binding protein 3)| Length = 451 Score = 32.3 bits (72), Expect = 0.95 Identities = 19/65 (29%), Positives = 30/65 (46%) Frame = +1 Query: 184 SGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNED 363 SGA Y +++SGT S R + DDEY D+Y+SGY + + D Sbjct: 303 SGASSYYASHRRSGTAQSRARSSRNRW----ADDEYD------DYDDDYESGYRRGNGRD 352 Query: 364 YGRNK 378 +++ Sbjct: 353 RTKDR 357
>ZN330_HUMAN (Q9Y3S2) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 320 Score = 32.3 bits (72), Expect = 0.95 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 214 KKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYGRNKS 381 +++G ++ D +SG Y K+ D+Y Y DEY++ + ED GR S Sbjct: 237 RQTGGEEGDGASGYDAYWKNLSSDKYGDTSYHDEEEDEYEA-EDDEEEEDEGRKDS 291
>GRP10_BRANA (Q05966) Glycine-rich RNA-binding protein 10| Length = 169 Score = 32.3 bits (72), Expect = 0.95 Identities = 23/70 (32%), Positives = 28/70 (40%), Gaps = 2/70 (2%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG--D 324 GY R GG G Y G ++ G GRGG +G Y G G ++ GG Sbjct: 97 GYGGRGGGGYGGGGGGY--GDRRGGGGYGSGGGGRGGGGYGSGGGGYGGGGGRRDGGGYG 154 Query: 325 EYDSGYNKAS 354 D GY S Sbjct: 155 GGDGGYGGGS 164
>MLE_DROME (P24785) Dosage compensation regulator (EC 3.6.1.-) (ATP-dependent| RNA helicase mle) (Protein male-less) (Protein no action potential) Length = 1293 Score = 32.3 bits (72), Expect = 0.95 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +1 Query: 136 KTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSG---RGGYNKSTGDDEYSGAGY 306 +T GY GGY +G GY G + + G GGY + G +G GY Sbjct: 1199 RTFGGGYGNNGGGYGNNGG-----GYGNIGGGYGNNAGGYGNNGGYGNNGGGYRNNGGGY 1253 Query: 307 KKSGG 321 +GG Sbjct: 1254 GNNGG 1258 Score = 30.4 bits (67), Expect = 3.6 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSG-----RGGYNKSTGDDEYSGAGYKKS 315 GY GGY +G + G ++ Y + G RGG+ S + SG G++ Sbjct: 1225 GYGNNAGGYGNNGGYGNNGGGYRNNGGGYGNNGGGYGNKRGGFGDSFESNRGSGGGFR-- 1282 Query: 316 GGDE 327 GD+ Sbjct: 1283 NGDQ 1286
>YSC84_YEAST (P32793) Protein YSC84 (LAS seventeen-binding protein 4)| Length = 468 Score = 32.3 bits (72), Expect = 0.95 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 15/98 (15%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDT------GYKKSGTDDYDRSSGRGGYN---KSTGD 282 +N + ++ YD +G Y+ + + YD +S T RSS R G + +S D Sbjct: 225 DNASGDDFYD--DGQYSDNTSHYYDDIPDSFDSTDESSTRPNTRSSRRRGMSLGSRSRYD 282 Query: 283 DEYSGAGYKKSGG------DEYDSGYNKASNEDYGRNK 378 D+Y GY + G ++ D Y ++ N + RN+ Sbjct: 283 DDYDDDGYGRGRGYGDFDSEDEDYDYGRSPNRNSSRNR 320
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 32.0 bits (71), Expect = 1.2 Identities = 17/69 (24%), Positives = 31/69 (44%) Frame = +1 Query: 163 REGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGY 342 RE +++SG+ G + S T DY + G G + +++ + + A GG G Sbjct: 537 REVSFSRSGSNRSTRGNRSSNTRDYRKHGGNGSFGQNSRNSSWGSARGGGFGGSTGGWGN 596 Query: 343 NKASNEDYG 369 ++A G Sbjct: 597 DRAGGSAGG 605
>DSPP_HUMAN (Q9NZW4) Dentin sialophosphoprotein precursor [Contains: Dentin| phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 1253 Score = 32.0 bits (71), Expect = 1.2 Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Frame = +1 Query: 58 PNSSEMADQXXXXXXXXXXXXXXXENKTSNEGYDRREG-GYNKSGAEDYDT--------- 207 PNSS+ ++ + + N + G G + GAED D+ Sbjct: 465 PNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNS 524 Query: 208 ---GYKKSGTDDYDRS-SGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNE 360 G +G DD D+S SG+G + S D S S + DS + +S++ Sbjct: 525 DSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSD 579
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)| Length = 512 Score = 32.0 bits (71), Expect = 1.2 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 5/65 (7%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRS-SGRGGYNKSTGDDEYSGAGYKKSG----GDEYD 333 GGY G +D GY D R G GGYN+S+G E G G + G G Sbjct: 189 GGY---GNQDQSGGYGGGQQDRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDR 245 Query: 334 SGYNK 348 G+NK Sbjct: 246 GGFNK 250 Score = 30.0 bits (66), Expect = 4.7 Identities = 16/54 (29%), Positives = 25/54 (46%) Frame = +1 Query: 208 GYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYG 369 GY + Y + S GGY +ST Y + Y S G +S +++ + YG Sbjct: 24 GYSQQSNQPYGQQS-YGGYGQSTDTSGYGQSSYSGSYGQTQNSYSTQSAPQGYG 76
>YXCE_BACSU (P46335) Hypothetical protein yxcE| Length = 216 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/60 (26%), Positives = 23/60 (38%) Frame = +1 Query: 178 NKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASN 357 ++S + Y YK S Y S T DD S KK ++ S +K S+ Sbjct: 40 SRSSSSSYSGSYKSSPKSSYSSGSSSSSKKSKTSDDSSSSISLKKKPSEKASSSSSKKSS 99
>NG3_DROME (P40140) Protein new-glue 3 precursor (NG-3)| Length = 146 Score = 32.0 bits (71), Expect = 1.2 Identities = 16/37 (43%), Positives = 25/37 (67%) Frame = +2 Query: 440 STAAADTRSPVATTSTAAVDTRSPVATTSTSAAGTKN 550 S +A T S ATT+TA+ T + ATT+TS++ +K+ Sbjct: 32 SASATTTTSASATTTTASDTTTTTAATTTTSSSSSKS 68
>EGG2_SCHJA (P19469) Eggshell protein 2A precursor| Length = 207 Score = 31.6 bits (70), Expect = 1.6 Identities = 21/66 (31%), Positives = 24/66 (36%), Gaps = 6/66 (9%) Frame = +1 Query: 190 AEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD------EYDSGYNKA 351 + DYD+GY G G GGY G + G G GG EY GY Sbjct: 22 SSDYDSGYGGGGG-----GGGGGGYGGWCGGSDCYGGGNGGGGGGGGGNGGEYGGGYGDV 76 Query: 352 SNEDYG 369 YG Sbjct: 77 YGGSYG 82
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 31.6 bits (70), Expect = 1.6 Identities = 20/61 (32%), Positives = 27/61 (44%) Frame = +1 Query: 145 NEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 + GYDR GGY+ + + G++ Y G GGY G Y G GY GG Sbjct: 21 SNGYDRNGGGYSNNYSSH-------GGSNGY--GGGGGGYGGGGGG--YGGGGYGGGGGG 69 Query: 325 E 327 + Sbjct: 70 D 70 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/62 (32%), Positives = 25/62 (40%), Gaps = 5/62 (8%) Frame = +1 Query: 169 GGYNK--SGAEDYDTGYKKSG---TDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 GGY G Y GY ++G +++Y G GY G G GY GG Y Sbjct: 8 GGYGGRGGGGGGYSNGYDRNGGGYSNNYSSHGGSNGYGGGGGGYGGGGGGY---GGGGYG 64 Query: 334 SG 339 G Sbjct: 65 GG 66
>YDC1_SCHPO (Q10422) Hypothetical RNA-binding protein C25G10.01 in chromosome I| Length = 297 Score = 31.2 bits (69), Expect = 2.1 Identities = 17/54 (31%), Positives = 26/54 (48%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKK 312 GYDRR + + + D GY+++ D D + R Y S E+S Y+K Sbjct: 192 GYDRRRNSRDFP-SNNKDGGYRRNNYRDRDSNRYRNSYRPSRPQREHSPGNYRK 244
>FA98A_PONPY (Q5R679) Protein FAM98A| Length = 518 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAED--YDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 S G ++GGY SG + Y G+ G + G GG+ S+ Y+G+GY + Sbjct: 388 SGGGGGYQDGGYRDSGFQPGGYHGGHSSGGY----QGGGYGGFQTSSS---YTGSGY-QG 439 Query: 316 GGDEYDSGY 342 GG + D+ Y Sbjct: 440 GGYQQDNRY 448 Score = 30.0 bits (66), Expect = 4.7 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKS---GAEDYDTGYKKSGTDDYD---RSSGRGGYNKSTGDDEY 291 + +T G R GGY S G ++ G + G YD R GRG ++ D Sbjct: 330 QQQTGGRGGGR--GGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGG 387 Query: 292 SGAGYKKSGGDEYDSGY 342 SG G G DSG+ Sbjct: 388 SGGGGGYQDGGYRDSGF 404
>HNRL1_MOUSE (Q8VDM6) Heterogeneous nuclear ribonucleoprotein U-like protein 1| Length = 859 Score = 31.2 bits (69), Expect = 2.1 Identities = 20/75 (26%), Positives = 27/75 (36%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 +D R GG+ G G YD GG G G G GG Y Sbjct: 610 FDSRGGGFRGRGGG--------GGFQRYDNRGPPGG--NRGGFQNRGGGGGSGGGGGNYR 659 Query: 334 SGYNKASNEDYGRNK 378 G+N++ Y +N+ Sbjct: 660 GGFNRSGGGGYNQNR 674 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKS 273 S G GG+N+SG Y+ + D + S+ RG YN++ Sbjct: 651 SGGGGGNYRGGFNRSGGGGYNQNRWGNNNRDNNNSNNRGNYNRA 694
>EGG1_SCHJA (P19470) Eggshell protein 1 precursor| Length = 212 Score = 31.2 bits (69), Expect = 2.1 Identities = 21/64 (32%), Positives = 23/64 (35%), Gaps = 6/64 (9%) Frame = +1 Query: 196 DYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD------EYDSGYNKASN 357 DYD+GY G G GGY G + G G GG EY GY Sbjct: 24 DYDSGYGGGGG-----GGGGGGYGGWCGGSDCYGGGNGGGGGGGGGNGGEYGGGYGDVYG 78 Query: 358 EDYG 369 YG Sbjct: 79 GSYG 82
>NG2_DROME (P40139) Protein new-glue 2 precursor (NG-2)| Length = 112 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 440 STAAADTRSPVATTSTAAVDTRSPVATTSTSAAGTKNLAA 559 +T + + S TTS +A T S ATT+TSA+ T A+ Sbjct: 26 TTTTSTSASATTTTSASATTTTSASATTTTSASATTTTAS 65
>K2C1_HUMAN (P04264) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)| (Keratin-1) (K1) (67 kDa cytokeratin) (Hair alpha protein) Length = 643 Score = 31.2 bits (69), Expect = 2.1 Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 2/73 (2%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKK--SGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGY 342 GG G Y +G SG Y G GG S G SG SGG Y SG Sbjct: 514 GGSRGGGGGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYG----SGGSSYGSGGGSYGSGG 569 Query: 343 NKASNEDYGRNKS 381 + YG S Sbjct: 570 GGGGHGSYGSGSS 582
>ROA1_DROME (P07909) Heterogeneous nuclear ribonucleoprotein A1 (hnRNP core| protein A1-A) (PEN repeat clone P9) Length = 365 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%) Frame = +1 Query: 142 SNEGYDRREGGYN-KSGAEDYDTGYKKSG--TDDYDRSSGRGG--YNKSTGDDEYSGAGY 306 +N +D GG N G +++ G G +Y RGG +N + G G+ Sbjct: 280 NNNPWDNGNGGGNFGGGGNNWNNGGNDFGGYQQNYGGGPQRGGGNFNNNRMQPYQGGGGF 339 Query: 307 KKSGGDEYDSGYNKASNEDYGRNK 378 K GG++ + G N + G N+ Sbjct: 340 KAGGGNQGNYGGNNQGFNNGGNNR 363
>FA98A_HUMAN (Q8NCA5) Protein FAM98A| Length = 519 Score = 31.2 bits (69), Expect = 2.1 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAED--YDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 S G ++GGY SG + Y G+ G + G GG+ S+ Y+G+GY + Sbjct: 389 SGGGGGYQDGGYRDSGFQPGGYHGGHSSGGY----QGGGYGGFQTSSS---YTGSGY-QG 440 Query: 316 GGDEYDSGY 342 GG + D+ Y Sbjct: 441 GGYQQDNRY 449 Score = 30.0 bits (66), Expect = 4.7 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 6/77 (7%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKS---GAEDYDTGYKKSGTDDYD---RSSGRGGYNKSTGDDEY 291 + +T G R GGY S G ++ G + G YD R GRG ++ D Sbjct: 331 QQQTGGRGGGR--GGYEHSSYGGRGGHEQGGGRGGRGGYDHGGRGGGRGNKHQGGWTDGG 388 Query: 292 SGAGYKKSGGDEYDSGY 342 SG G G DSG+ Sbjct: 389 SGGGGGYQDGGYRDSGF 405
>NG1_DROME (P23938) Protein new-glue 1 precursor (NG-1) (Salivary glue protein| homolog) Length = 107 Score = 31.2 bits (69), Expect = 2.1 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +2 Query: 440 STAAADTRSPVATTSTAAVDTRSPVATTSTSAAGTKNLAA 559 +T + + S TTS +A T S ATT+TSA+ T A+ Sbjct: 26 TTTTSTSASATTTTSASATTTTSASATTTTSASATTTTAS 65
>ILF3_BRARE (Q6NXA4) Interleukin enhancer-binding factor 3 homolog| Length = 833 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 GG+N+ G Y G SG + Y+ GG S S G +GG Sbjct: 646 GGFNQGGYGTYGYGGNNSGYNFYNNGGSNGGSVASNQGTNQSSGGAAATGG 696
>HORN_MOUSE (Q8VHD8) Hornerin| Length = 2496 Score = 30.8 bits (68), Expect = 2.8 Identities = 16/66 (24%), Positives = 30/66 (45%) Frame = +1 Query: 160 RREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSG 339 R+ G+ + G+E + + SSG G + S+G SG+G+ + G + Sbjct: 197 RKASGFPQPGSEQGQSSSSSTKGSGECYSSGNGKHGSSSGGSAVSGSGHSNTYGKQGTGS 256 Query: 340 YNKASN 357 + +SN Sbjct: 257 RHSSSN 262
>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)| (ATP-dependent helicase rho) Length = 690 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/80 (23%), Positives = 33/80 (41%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 + +G DRR G D D + DD R +GRG ++ G + G Sbjct: 169 AQQGQDRRSDGAQGEDGADADRRGDREDRDDNGRENGRGRNGRN---------GRDRDNG 219 Query: 322 DEYDSGYNKASNEDYGRNKS 381 + ++G + + + GR+ S Sbjct: 220 RDRENGRENSRDRENGRDGS 239
>GRP1_PHAVU (P10495) Glycine-rich cell wall structural protein 1.0 precursor| (GRP 1.0) Length = 252 Score = 30.8 bits (68), Expect = 2.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 250 GRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYN 345 G GGY + G E +GAGY +GG G N Sbjct: 63 GGGGYGEGAGGGEGAGAGYGAAGGGHGGGGGN 94 Score = 30.0 bits (66), Expect = 4.7 Identities = 22/69 (31%), Positives = 26/69 (37%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNK 348 GG K G E Y G G SG GG + G +G+GY G GY Sbjct: 109 GGAGKGGGEGYGGGGANGGGYGGGGGSGGGGGGGAGG----AGSGYGGGEGSGAGGGYGG 164 Query: 349 ASNEDYGRN 375 A+ G N Sbjct: 165 ANGGGGGGN 173
>YQ53_CAEEL (Q09249) Hypothetical protein C16C10.3| Length = 1032 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 133 NKTSN-EGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYK 309 NK S +G GGY +S + D GY+ +D D RG Y G+D Y Sbjct: 297 NKLSEMKGGGGGRGGYGRSDSRDSRGGYRGGRSDSRD---FRGVYGNRGGNDRYRDE--S 351 Query: 310 KSGGDEYDSGYNKASN 357 + D YDS + S+ Sbjct: 352 RGRRDMYDSRRDSGSS 367
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.8 bits (68), Expect = 2.8 Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Frame = +2 Query: 440 STAAADTRSPVA-TTSTAAVDTRSPVATTSTSAAGT 544 +TAA T SP + +TST T +P A+T+TSA T Sbjct: 254 TTAATTTGSPTSGSTSTTGASTSTPSASTATSATPT 289
>HYR1_CANAL (P46591) Hyphally-regulated protein precursor| Length = 937 Score = 30.8 bits (68), Expect = 2.8 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 11/122 (9%) Frame = +1 Query: 37 VCFSPVVPNSSEMADQXXXXXXXXXXXXXXXENKTSN-EGYDRREGGYNKSGAEDYDTGY 213 V ++ VP+++ A E+ +++ G EG N SGA + Sbjct: 555 VTYTTNVPHTTVDATTTTTTSTGGDNSTGGNESGSNHGPGNGSTEGSGNGSGAGSNEGS- 613 Query: 214 KKSGTDDYDRSSGRGGYNKSTGDDEYS----------GAGYKKSGGDEYDSGYNKASNED 363 +SG ++ S GG N +G D S G+G + G E SG N+ S Sbjct: 614 -QSGPNNGSGSGSEGGSNNGSGSDSGSNNGSGSGSNNGSGSGSTEGSEGGSGSNEGSQSG 672 Query: 364 YG 369 G Sbjct: 673 SG 674 Score = 29.3 bits (64), Expect = 8.0 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 2/78 (2%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKST--GDDEYSGAGYKKS 315 SN G G N SG+ + SG+ + S G G N+ + G G Sbjct: 629 SNNGSGSDSGSNNGSGSGSNNG----SGSGSTEGSEGGSGSNEGSQSGSGSQPGPNEGSE 684 Query: 316 GGDEYDSGYNKASNEDYG 369 GG + G N SNE G Sbjct: 685 GGSGSNEGSNHGSNEGSG 702
>RO22_XENLA (P51990) Heterogeneous nuclear ribonucleoprotein A2 homolog 2| (hnRNP A2(B)) Length = 358 Score = 30.8 bits (68), Expect = 2.8 Identities = 24/88 (27%), Positives = 30/88 (34%), Gaps = 11/88 (12%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKST-----------GDDEYSG 297 GY +GG ++ + G Y GRGGY G D Y G Sbjct: 233 GYGGGQGGTYLDEKQNLYSSGNFGGGPSYGAGGGRGGYGGGPSYGNQGGGYGGGYDNYGG 292 Query: 298 AGYKKSGGDEYDSGYNKASNEDYGRNKS 381 Y GG+ D G + YG KS Sbjct: 293 GNY-GGGGNYNDFGNYNQQSSSYGPMKS 319
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 30.8 bits (68), Expect = 2.8 Identities = 19/116 (16%), Positives = 24/116 (20%) Frame = +2 Query: 197 TTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 376 TT Sbjct: 257 TTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAA 316 Query: 377 XXXXXXXXXXXXXXXXXXXXMSTAAADTRSPVATTSTAAVDTRSPVATTSTSAAGT 544 ST A T +P A+T+T+A T +TSTSAA T Sbjct: 317 TTTAATTTAATTTGSPTSGSTSTTGASTSTPSASTATSATPT-----STSTSAAAT 367
>TGON2_HUMAN (O43493) Trans-Golgi network integral membrane protein 2 precursor| (Trans-Golgi network protein TGN51) (TGN46) (TGN48) (TGN38 homolog) Length = 480 Score = 30.8 bits (68), Expect = 2.8 Identities = 21/68 (30%), Positives = 34/68 (50%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKK 312 NK+ +G ++G +KSGAED T ++ + + G NKS +++ G K Sbjct: 180 NKSGADGQTPKDGS-SKSGAED-QTPKDVPNKSGAEKQTPKDGSNKSGAEEQGPIDGPSK 237 Query: 313 SGGDEYDS 336 SG +E S Sbjct: 238 SGAEEQTS 245
>IFI4_MOUSE (P15092) Interferon-activable protein 204 (Ifi-204)| (Interferon-inducible protein p204) Length = 640 Score = 30.8 bits (68), Expect = 2.8 Identities = 18/35 (51%), Positives = 21/35 (60%) Frame = +2 Query: 440 STAAADTRSPVATTSTAAVDTRSPVATTSTSAAGT 544 STA A T + A TSTA T + A TST+ AGT Sbjct: 137 STAQARTSTAQARTSTAQARTSTAQARTSTAQAGT 171
>DHX9_PONPY (Q5R874) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) Length = 1269 Score = 30.8 bits (68), Expect = 2.8 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSG--AGYKKS 315 S+ GY GGY S A + GY G R RGG+ ++G D Y G GY+ S Sbjct: 1190 SSGGYG--SGGYGGS-ANSFRAGY--GGVGGGYRGVSRGGFRGNSGGD-YRGPSGGYRGS 1243 Query: 316 GGDEYDSGYNKASNEDYGRNK 378 GG + G +G+ + Sbjct: 1244 GGFQRGGGRGAYGTGYFGQGR 1264
>DHX9_HUMAN (Q08211) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) Length = 1270 Score = 30.8 bits (68), Expect = 2.8 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 2/81 (2%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSG--AGYKKS 315 S+ GY GGY S A + GY Y R RGG+ ++G D Y G GY+ S Sbjct: 1190 SSGGYG--SGGYGGS-ANSFRAGYGAGVGGGY-RGVSRGGFRGNSGGD-YRGPSGGYRGS 1244 Query: 316 GGDEYDSGYNKASNEDYGRNK 378 GG + G +G+ + Sbjct: 1245 GGFQRGGGRGAYGTGYFGQGR 1265
>DHR18_ARATH (P30185) Dehydrin Rab18| Length = 186 Score = 30.8 bits (68), Expect = 2.8 Identities = 20/62 (32%), Positives = 26/62 (41%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 Y R GG ++Y ++ D+Y G GGY G G GY +GG Y Sbjct: 4 YQNRPGG---QATDEYGNPIQQQ-YDEYGNPMGGGGYGTGGGGGATGGQGY-GTGGQGYG 58 Query: 334 SG 339 SG Sbjct: 59 SG 60
>ROA1_RAT (P04256) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) (HDP) Length = 319 Score = 30.4 bits (67), Expect = 3.6 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = +1 Query: 163 REGGYNKSGAEDYDTGYKKSGTDDYDRS---SGRGGYNKSTGDDEY--SGAGYKKSGGDE 327 R G N G G G D++ R SGRGG+ S G Y SG GY G D Sbjct: 195 RSGSGNFGGGRGGGFG----GNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDG 250 Query: 328 YDSGYNKASNEDYG 369 + G S D+G Sbjct: 251 SNFG-GGGSYNDFG 263
>ROA1_MOUSE (P49312) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) (HDP-1) (Topoisomerase-inhibitor suppressed) Length = 319 Score = 30.4 bits (67), Expect = 3.6 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = +1 Query: 163 REGGYNKSGAEDYDTGYKKSGTDDYDRS---SGRGGYNKSTGDDEY--SGAGYKKSGGDE 327 R G N G G G D++ R SGRGG+ S G Y SG GY G D Sbjct: 195 RSGSGNFGGGRGGGFG----GNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDG 250 Query: 328 YDSGYNKASNEDYG 369 + G S D+G Sbjct: 251 SNFG-GGGSYNDFG 263
>ROA1_MACMU (Q28521) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand binding protein) (hnRNP core protein A1) Length = 319 Score = 30.4 bits (67), Expect = 3.6 Identities = 26/74 (35%), Positives = 31/74 (41%), Gaps = 5/74 (6%) Frame = +1 Query: 163 REGGYNKSGAEDYDTGYKKSGTDDYDRS---SGRGGYNKSTGDDEY--SGAGYKKSGGDE 327 R G N G G G D++ R SGRGG+ S G Y SG GY G D Sbjct: 195 RSGSGNFGGGRGGGFG----GNDNFGRGGNFSGRGGFGGSRGGGGYGGSGDGYNGFGNDG 250 Query: 328 YDSGYNKASNEDYG 369 + G S D+G Sbjct: 251 SNFG-GGGSYNDFG 263
>SIAL_BOVIN (Q28862) Bone sialoprotein-2 precursor (Bone sialoprotein II) (BSP| II) (Cell-binding sialoprotein) (Integrin-binding sialoprotein) Length = 310 Score = 30.4 bits (67), Expect = 3.6 Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 7/53 (13%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYK----KSGT---DDYDRSSGRGGYNKSTGDDEYSGAGY 306 G Y ++G +YD GY+ ++G D+Y Y K G D Y G Y Sbjct: 254 GEYEQTGTNEYDNGYEIYESENGDPRGDNYRAYEDEYSYYKGRGYDSYDGQDY 306
>NOP3_YEAST (Q01560) Nucleolar protein 3 (Mitochondrial targeting suppressor 1| protein) (Nuclear polyadenylated RNA-binding protein 1) Length = 414 Score = 30.4 bits (67), Expect = 3.6 Identities = 24/76 (31%), Positives = 28/76 (36%) Frame = +1 Query: 142 SNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 S G+ GG+ G GY + G Y R GGY S G + GY G Sbjct: 306 SRGGFGGPRGGFG--GPRGGYGGYSRGGYGGYSR----GGYGGSRGGYDSPRGGYDSPRG 359 Query: 322 DEYDSGYNKASNEDYG 369 GY N DYG Sbjct: 360 GYSRGGYGGPRN-DYG 374
>K22E_HUMAN (P35908) Keratin, type II cytoskeletal 2 epidermal (Cytokeratin-2e)| (K2e) (CK 2e) Length = 645 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 15/82 (18%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGT------------DDYDRSSGRGGYNKSTGDDE---YSGAG 303 GGY+ SG+ Y +G ++SG+ Y G GG S G + SG G Sbjct: 536 GGYS-SGSSSYGSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGG 594 Query: 304 YKKSGGDEYDSGYNKASNEDYG 369 Y GG G ++ + G Sbjct: 595 YGSGGGKHSSGGGSRGGSSSGG 616
>SEC9_KLULA (Q6CSD1) Protein transport protein SEC9| Length = 556 Score = 30.4 bits (67), Expect = 3.6 Identities = 20/65 (30%), Positives = 26/65 (40%), Gaps = 3/65 (4%) Frame = +1 Query: 175 YNKSGAEDYDTGYK---KSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYN 345 Y + A YDTGY + + Y S NKS G + YSG Y S N Sbjct: 128 YGNASASPYDTGYNAPLQQNNNPYG-SMNNSYSNKSYGSNSYSGDTYASPSPQASSSNNN 186 Query: 346 KASNE 360 A+ + Sbjct: 187 GATGQ 191
>CAZ_DROME (Q27294) RNA-binding protein cabeza (Sarcoma-associated RNA-binding| fly homolog) (P19) Length = 399 Score = 30.4 bits (67), Expect = 3.6 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 2/70 (2%) Frame = +1 Query: 166 EGGYNKSGAEDYDTGYKKSGTD-DYDRSSGRGGY-NKSTGDDEYSGAGYKKSGGDEYDSG 339 EG G Y G G D DR SG GGY N+ G + G G GG G Sbjct: 306 EGSSGGGGGGGYGGGGGGGGYDRGNDRGSGGGGYHNRDRGGNSQGGGGGGGGGG-----G 360 Query: 340 YNKASNEDYG 369 Y++ ++ + G Sbjct: 361 YSRFNDNNGG 370 Score = 30.4 bits (67), Expect = 3.6 Identities = 28/85 (32%), Positives = 33/85 (38%), Gaps = 14/85 (16%) Frame = +1 Query: 133 NKTSN-----EGYDRREGGYNK------SGAEDYDTGYKKSGTDDYDRSSGRGGYNKST- 276 NKT N Y ++ GGY+ SG G S D S G GG +K + Sbjct: 29 NKTGNYNEPPPNYGKQGGGYDSGSGHRGSGGSGNGGGGGGSWNDRGGNSYGNGGASKDSY 88 Query: 277 --GDDEYSGAGYKKSGGDEYDSGYN 345 G YSG G GG SG N Sbjct: 89 NKGHGGYSGGGGGGGGGGGGGSGGN 113
>RB87F_DROME (P48810) Heterogeneous nuclear ribonucleoprotein 87F (HRP36.1| protein) (Protein P11) Length = 385 Score = 30.0 bits (66), Expect = 4.7 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 6/76 (7%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSG----GDEYDS 336 GG+N+ G + G + G GGY + + G G G G+EY Sbjct: 263 GGWNQQGGSGGGPWNNQGGGNGGWNGGGGGGYGGGNSNGSWGGNGGGGGGGGGFGNEYQQ 322 Query: 337 GY--NKASNEDYGRNK 378 Y N ++G N+ Sbjct: 323 SYGGGPQRNSNFGNNR 338
>ROA1_HUMAN (P09651) Heterogeneous nuclear ribonucleoprotein A1| (Helix-destabilizing protein) (Single-strand RNA-binding protein) (hnRNP core protein A1) Length = 371 Score = 30.0 bits (66), Expect = 4.7 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +1 Query: 142 SNEGYDR--REGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKS 315 S +GY+ +GGY G Y G + G+ + GY S D Y+ G + Sbjct: 239 SGDGYNGFGNDGGYG-GGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGRGF 297 Query: 316 GGDEYDSGYNKASNEDYG 369 GG + S D+G Sbjct: 298 GGGSGSNFGGGGSYNDFG 315
>RBP56_HUMAN (Q92804) TATA-binding protein-associated factor 2N (RNA-binding| protein 56) (TAFII68) (TAF(II)68) Length = 592 Score = 30.0 bits (66), Expect = 4.7 Identities = 25/74 (33%), Positives = 26/74 (35%), Gaps = 2/74 (2%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDY--DRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 G DR GGY G + G Y DRS G GG G G GY GGD Sbjct: 523 GGDRSRGGY----------GGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGY---GGD 569 Query: 325 EYDSGYNKASNEDY 366 G DY Sbjct: 570 RGGYGGKMGGRNDY 583 Score = 30.0 bits (66), Expect = 4.7 Identities = 26/75 (34%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Frame = +1 Query: 166 EGGYNKSGAEDYDTGY----KKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 E GY G D G + G DRSSG GGY+ + SG GY GGD Sbjct: 402 ERGYRGRGGRGGDRGGYGGDRSGGGYGGDRSSG-GGYS-----GDRSGGGY---GGDRSG 452 Query: 334 SGYNKASNEDYGRNK 378 GY YG ++ Sbjct: 453 GGYGGDRGGGYGGDR 467
>NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar| protein family A member 1) (snoRNP protein GAR1) Length = 217 Score = 30.0 bits (66), Expect = 4.7 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 9/49 (18%) Frame = +1 Query: 169 GGYNKSGAEDYDTG---------YKKSGTDDYDRSSGRGGYNKSTGDDE 288 GG+N+ G+ ++ G ++ G + R GRGG+NK G D+ Sbjct: 18 GGFNRGGSSNHFRGGGGGGGGGNFRGGGRGGFGRGGGRGGFNK--GQDQ 64
>ION3_CARAU (P18520) Intermediate filament protein ON3| Length = 520 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 220 SGTDDYDRSSGRG-GYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNE 360 SG +Y G G G S+G SG GY GG SGY++ ++ Sbjct: 446 SGYSNYSSGYGGGYGGGYSSGGGYSSGGGYSSGGGYSSGSGYSETVSQ 493
>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25| Length = 561 Score = 30.0 bits (66), Expect = 4.7 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%) Frame = +1 Query: 160 RREGGYNKS-GAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDS 336 RRE + S D D GY++S ++ DR S R +S D Y ++ Sbjct: 217 RRERNRDPSPSVSDDDRGYRQSSREERDRKSSREEGGRSRSRDRYRNRSRER-------- 268 Query: 337 GYNKASNEDYGRNKS 381 Y S E+ R++S Sbjct: 269 -YRDRSREERSRDRS 282
>HTRA_LACLA (Q9LA06) Serine protease do-like htrA (EC 3.4.21.-) (HtrALl)| Length = 408 Score = 30.0 bits (66), Expect = 4.7 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 7/47 (14%) Frame = +1 Query: 211 YKKSGTDDYDRSS---GRGGYNKSTG----DDEYSGAGYKKSGGDEY 330 Y+K + D SS G G + ST E SG YKKSGGD Y Sbjct: 75 YQKDNSQSSDFSSIFGGNSGSSSSTDGLQLSSEGSGVIYKKSGGDAY 121
>PNS1_YARLI (Q6C938) Protein PNS1| Length = 571 Score = 30.0 bits (66), Expect = 4.7 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 145 NEGYDRREGGYNKSGAEDYDTGYKKS-GTDDYDRSSGRGGYNKSTGDD 285 N YD +GGYN++ +DY Y S G D GGY + D+ Sbjct: 32 NAEYDTHQGGYNQNQNQDY---YNHSQGGYQMDNMGQHGGYQGNPNDN 76
>DHX9_BOVIN (Q28141) ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA| helicase II) (NDH II) (DEAH box protein 9) Length = 1287 Score = 29.6 bits (65), Expect = 6.1 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +1 Query: 169 GGYNKSGAEDY--DTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGY 306 GGY DY ++G G+ + R GRGGY G GY Sbjct: 1240 GGYRGMSGGDYRGESGGGYRGSGGFQRGGGRGGYGGGYFGQGRGGGGY 1287
>NOLA1_XENTR (Q5RJV1) H/ACA ribonucleoprotein complex subunit 1-like protein| Length = 218 Score = 29.6 bits (65), Expect = 6.1 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 3/52 (5%) Frame = +1 Query: 160 RREGGYNKSGAEDYDTGY---KKSGTDDYDRSSGRGGYNKSTGDDEYSGAGY 306 R GG+N+ G G + G Y + GRGG+ + G ++ GY Sbjct: 4 RGRGGFNRGGGGGRGGGGFGGRGGGRGGYGQGGGRGGFGRGGGRGGFNRGGY 55
>ILF3_RAT (Q9JIL3) Interleukin enhancer-binding factor 3| Length = 897 Score = 29.6 bits (65), Expect = 6.1 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = +1 Query: 148 EGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDD-EYSGAGYKKSGGD 324 +GY +G Y+ S ++ Y+ G GG + S YSG+G +SGG+ Sbjct: 776 KGYGHGQGSYS-------------SYSNSYNSPGGGGGSDYSYDSKFNYSGSG-GRSGGN 821 Query: 325 EY---DSGYNKASNEDYG 369 Y S YN S+ YG Sbjct: 822 SYGSSGSSYNTGSHGGYG 839
>PG10_MYCTU (O53810) Hypothetical PE-PGRS family protein PE_PGRS10 precursor| Length = 801 Score = 29.6 bits (65), Expect = 6.1 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = +1 Query: 163 REGGYNKSGAEDYDTG-YKKSGTDDYDRSSGRGGYNKSTGDDEYSGAG 303 R GG+ +G D G + SG S G GG +KS GD GAG Sbjct: 264 RSGGFGGAGGAGGDAGMFFGSGG-----SGGAGGISKSVGDSAAGGAG 306
>GRP2_ORYSA (P29834) Glycine-rich cell wall structural protein 2 precursor| Length = 185 Score = 29.6 bits (65), Expect = 6.1 Identities = 20/71 (28%), Positives = 27/71 (38%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYK 309 E S GY +G +G GY G + G GGY + +G G+GY Sbjct: 85 EGGGSGSGYGSGQGSGYGAGVGGAG-GYGSGGGGGGGQGGGAGGYGQGSG----YGSGYG 139 Query: 310 KSGGDEYDSGY 342 G + GY Sbjct: 140 SGAGGAHGGGY 150
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 29.6 bits (65), Expect = 6.1 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +1 Query: 133 NKTSNEGYDRREGGYNKSGAEDYDTGYKK-SGTDDYDRSSGRGGYNKS 273 N+ S G +RR GGY++ G + G G +D S G GG N S Sbjct: 55 NERSFFGNERRGGGYSRGGRGSVNWGGSNWGGRNDSRGSGGYGGGNSS 102
>HNRL1_HUMAN (Q9BUJ2) Heterogeneous nuclear ribonucleoprotein U-like protein 1| (Adenovirus early region 1B-associated protein 5) (E1B-55 kDa-associated protein 5) (E1B-AP5) Length = 856 Score = 29.6 bits (65), Expect = 6.1 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKS 273 GG+N+SG Y + D + S+ RG YN++ Sbjct: 657 GGFNRSGGGGYSQNRWGNNNRDNNNSNNRGSYNRA 691
>ILF3_MOUSE (Q9Z1X4) Interleukin enhancer-binding factor 3| Length = 898 Score = 29.6 bits (65), Expect = 6.1 Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 5/79 (6%) Frame = +1 Query: 148 EGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDD-EYSGAGYKKSGGD 324 +GY +G Y+ S ++ Y+ G GG + S YSG+G +SGG+ Sbjct: 776 KGYGHGQGSYS-------------SYSNSYNSPGGGGGSDYSYDSKFNYSGSG-GRSGGN 821 Query: 325 EY----DSGYNKASNEDYG 369 Y S YN S+ YG Sbjct: 822 SYGSSGSSSYNTGSHGGYG 840
>FHL1_YEAST (P39521) Pre-rRNA-processing protein FHL1| Length = 936 Score = 29.3 bits (64), Expect = 8.0 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Frame = +1 Query: 190 AEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDE--YSGAGYKKSGGDEYDSGYNKASNED 363 A+D D +SGT SS G +G D+ SG+G S E +S + S D Sbjct: 807 AQDNDLE-SESGTSSSSSSSSESGSESDSGSDDGSASGSGDNSSTSSESESESDSGSEVD 865 Query: 364 YGRNKS 381 NK+ Sbjct: 866 EKNNKN 871
>K1C10_MOUSE (P02535) Keratin, type I cytoskeletal 10 (Cytokeratin-10) (CK-10)| (Keratin-10) (K10) (56 kDa cytokeratin) (Keratin, type I cytoskeletal 59 kDa) Length = 569 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/56 (28%), Positives = 22/56 (39%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDS 336 G + S Y G G + SSG G S+ + G+K SGG + S Sbjct: 509 GSHGGSSGGGYGGGSSSGGAGGHGGSSGGGYGGGSSSGGQGGSGGFKSSGGGDQSS 564
>MUC5A_HUMAN (P98088) Mucin-5AC (Mucin 5 subtype AC, tracheobronchial)| (Tracheobronchial mucin) (TBM) (Major airway glycoprotein) (Fragment) Length = 1233 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 10/46 (21%) Frame = +2 Query: 437 MSTAAADTRSPVATTSTAAVDTR----------SPVATTSTSAAGT 544 M + T SPV TTST + T SPV TTST++A T Sbjct: 28 MPSGPGTTPSPVPTTSTTSAPTTSTTSGPGTTPSPVPTTSTTSAPT 73
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)| Length = 518 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 4/68 (5%) Frame = +1 Query: 157 DRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSG----GD 324 D+ GG G D G + G G GGYN+S+G E G G + G G Sbjct: 198 DQSGGGGGGYGGGQQDRGGRGRG--------GGGGYNRSSGGYEPRGRGGGRGGRGGMGG 249 Query: 325 EYDSGYNK 348 G+NK Sbjct: 250 SDRGGFNK 257
>ERF2_DEBHA (Q9HGI6) Eukaryotic peptide chain release factor GTP-binding| subunit (ERF2) (Translation release factor 3) (Polypeptide release factor 3) (ERF3) (ERF-3) Length = 701 Score = 29.3 bits (64), Expect = 8.0 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYK--KSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 GY Y++ G ++Y+ GY+ G Y +++ RGGYN Y GG Sbjct: 67 GYQGGYQNYSQGGYQNYNQGYQNYNQGYQGY-QNNNRGGYN-----------NYNNRGGY 114 Query: 325 EYDSGYNKASNE 360 + YN+ + Sbjct: 115 NNYNNYNQQDQQ 126
>RBM3_MOUSE (O89086) Putative RNA-binding protein 3 (RNA-binding motif protein| 3) Length = 153 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/61 (36%), Positives = 26/61 (42%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYD 333 YD R GGY GY + DY S +GGY D YSG Y+ D YD Sbjct: 115 YDSRPGGY----------GYGYGRSRDY--SGSQGGY------DRYSGGNYR----DNYD 152 Query: 334 S 336 + Sbjct: 153 N 153
>CSP_PLACG (P08674) Circumsporozoite protein precursor (CS)| Length = 401 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/73 (27%), Positives = 32/73 (43%) Frame = +1 Query: 145 NEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 N+G GG + A G +G + ++G GG N GD + G KK+G Sbjct: 240 NDGAAAAGGGNGGAAAGGGGNGGAAAGGGNGGAAAG-GGNNARAGDQQPPAGGNKKAGEA 298 Query: 325 EYDSGYNKASNED 363 ++G +A N + Sbjct: 299 GGNAGAGQAQNNE 311
>ARS2_CAEEL (Q966L5) Arsenite-resistance protein 2 homolog| Length = 712 Score = 29.3 bits (64), Expect = 8.0 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = +1 Query: 214 KKSGTDDYDRSSG--RGGYNKSTGDDEYSGAGYKKS-GGDEYD 333 K++ DD+ G RGGY + DD G G + S GG YD Sbjct: 628 KQAPRDDHRGGGGGERGGYGRERDDDRGPGGGGRNSFGGGGYD 670
>HRP1_YEAST (Q99383) Nuclear polyadenylated RNA-binding protein 4 (Cleavage| factor IB) (CFIB) Length = 534 Score = 29.3 bits (64), Expect = 8.0 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNK 270 ++ S GY+R G +++ D D ++ G + GRGGYN+ Sbjct: 479 DDHNSGYGYNRDRGDRDRND-RDRDYNHRSGGNHRRNGRGGRGGYNR 524
>GRP1_SORBI (Q99069) Glycine-rich RNA-binding protein 1 (Fragment)| Length = 142 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/67 (32%), Positives = 23/67 (34%) Frame = +1 Query: 151 GYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEY 330 GY GG G D G G Y GRGGY G Y G G GG Sbjct: 76 GYGGGRGGGGGYGRRDGGGGGYGGGGGGY--GGGRGGY----GGGGYGGGGGGYGGGSRG 129 Query: 331 DSGYNKA 351 GY + Sbjct: 130 GGGYGNS 136
>ZN330_CRIGR (O70524) Zinc finger protein 330 (Nucleolar cysteine-rich protein)| (Nucleolar autoantigen 36) Length = 317 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/57 (28%), Positives = 26/57 (45%) Frame = +1 Query: 154 YDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGD 324 + R+ GG GA YD +K +D+Y + GY+ +DE ++ G D Sbjct: 235 FGRQTGGEEGDGASGYDAYWKNLSSDEYADT----GYHDDEEEDEAEDEEEEEDGKD 287
>SQD_DROME (Q08473) RNA-binding protein squid (Heterogeneous nuclear| ribonucleoprotein 40) (HNRNP 40) Length = 344 Score = 29.3 bits (64), Expect = 8.0 Identities = 22/70 (31%), Positives = 26/70 (37%) Frame = +1 Query: 130 ENKTSNEGYDRREGGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYK 309 + + S GY GGY G DY G +G D G GY G + G GY Sbjct: 249 DGQGSYGGYGGGYGGYGAGGYGDYYAGGYYNGYD-----YGYDGYGYGGG---FEGNGYG 300 Query: 310 KSGGDEYDSG 339 GG G Sbjct: 301 GGGGGNMGGG 310
>ROA1_SCHAM (P21522) Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog| Length = 342 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/78 (25%), Positives = 27/78 (34%), Gaps = 11/78 (14%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGG-----------YNKSTGDDEYSGAGYKKS 315 GG + G G G D+ S+G GG + G D + G G Sbjct: 194 GGGGRGGVGGGAGGGWGGGRGDWGGSAGGGGGGGWGGADPWENGRGGGGDRWGGGGGGMG 253 Query: 316 GGDEYDSGYNKASNEDYG 369 GGD + G + YG Sbjct: 254 GGDRWGGGGGMGGGDRYG 271
>PSP2_YEAST (P50109) Protein PSP2 (Mitochondrial regulator of splicing 15)| Length = 578 Score = 29.3 bits (64), Expect = 8.0 Identities = 16/55 (29%), Positives = 26/55 (47%) Frame = +1 Query: 205 TGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGGDEYDSGYNKASNEDYG 369 +G+ G +D R++GRG YN S + G G+ + G + N+ S G Sbjct: 507 SGFLGQGNNDSIRNNGRGNYNSSGMNGGSRGRGFGRGRGFGRGAYNNRGSRGGRG 561
>NIFD_AZOVI (P07328) Nitrogenase molybdenum-iron protein alpha chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 491 Score = 29.3 bits (64), Expect = 8.0 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 169 GGYNKSGAEDYDTGYKKSGTDDYDRSSGRGGYNKSTGDD 285 G Y G E TGY+ + DDYDR+ G + DD Sbjct: 364 GAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTLLYDD 402
>FA98A_RAT (Q5FWT1) Protein FAM98A| Length = 515 Score = 29.3 bits (64), Expect = 8.0 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +1 Query: 148 EGYDRREGGYNKSGAED--YDTGYKKSGTDDYDRSSGRGGYNKSTGDDEYSGAGYKKSGG 321 +G GGY G D + G G + G GG+ S+ Y+G+GY + GG Sbjct: 384 DGGSASGGGYQDGGYRDPGFQPGGYHGGHSSGYQGGGYGGFQTSS----YTGSGY-QGGG 438 Query: 322 DEYDSGY 342 + D+ Y Sbjct: 439 YQQDNRY 445 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.139 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,474,572 Number of Sequences: 219361 Number of extensions: 391980 Number of successful extensions: 2388 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 1612 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2208 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4643056080 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
