ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basdp08 |
|---|---|
| Clone Library Name | barley_pub |
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 335 bits (859), Expect = 5e-92 Identities = 159/188 (84%), Positives = 174/188 (92%) Frame = +1 Query: 7 HEGRAGARYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDAD 186 + G +LDG+LVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLA+NLAG++IGTR E AD Sbjct: 59 YPGAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAAD 118 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVDGSS Sbjct: 119 AKSTPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSS 178 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAADPEKKETL 546 YLGQPLPF+I+TLIWIEVLVIGYIEFQRNAELD E+RLYPGG +FDPLGLAADPEK L Sbjct: 179 YLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQL 238 Query: 547 QLAEIKHA 570 QLAEIKHA Sbjct: 239 QLAEIKHA 246
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 333 bits (854), Expect = 2e-91 Identities = 159/186 (85%), Positives = 171/186 (91%) Frame = +1 Query: 13 GRAGARYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVK 192 G YLDG+LVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLA+NL GE+IGTR E D K Sbjct: 58 GAKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPK 117 Query: 193 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL 372 STPFQPY+EVFGLQRFRECELIHGRWAMLATLGA+TVEWLTGVTWQDAGKVELVDGSSYL Sbjct: 118 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYL 177 Query: 373 GQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAADPEKKETLQL 552 GQPLPF+I+TLIWIEVLVIGYIEFQRNAELD E+RLYPGG +FDPLGLA+DP KK LQL Sbjct: 178 GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQL 237 Query: 553 AEIKHA 570 AEIKHA Sbjct: 238 AEIKHA 243
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 305 bits (782), Expect = 5e-83 Identities = 142/180 (78%), Positives = 165/180 (91%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 +LDG+++GD GFDPFGLGKPAEYLQYD D LDQNLA+N+AG+IIG E +++K TPFQP Sbjct: 68 WLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTPFQP 127 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPF 390 Y EVFG+QRFRECELIHGRWAML TLGA+ VE LTG+ WQDAGKVELV+GSSYLGQPLPF Sbjct: 128 YTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYLGQPLPF 187 Query: 391 TITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIKHA 570 ++TTLIWIEVLV+GYIEFQRN+ELDPE+R+YPGG YFDPLGLAADPEK +TL+LAEIKH+ Sbjct: 188 SLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKLAEIKHS 246
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 199 bits (506), Expect = 5e-51 Identities = 109/189 (57%), Positives = 134/189 (70%), Gaps = 9/189 (4%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQ- 207 +LDG+L GD GFDP GL KP+E++ VD DQN A+N G + +A V++TP + Sbjct: 61 WLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSV------EAIVQATPDEV 114 Query: 208 -------PYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 PY+EVFGL RFRECELIHGRWAMLA LGAL E TGV+W +AGKVEL DG+S Sbjct: 115 SSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL-DGAS 173 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAA-DPEKKET 543 Y G LPF+IT LIWIEV+++G EF RN+E +PE+R YPGG FDPL LA+ D E+ Sbjct: 174 YAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEERAFR 232 Query: 544 LQLAEIKHA 570 L+ AEIKHA Sbjct: 233 LKTAEIKHA 241
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 104 bits (259), Expect = 2e-22 Identities = 69/189 (36%), Positives = 96/189 (50%), Gaps = 4/189 (2%) Frame = +1 Query: 13 GRAGARYLDGTLVGDYGFDPFGLGK-PAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADV 189 G+ YLDG+ GD+GFD GLG+ PA Sbjct: 52 GQPRPSYLDGSAPGDFGFDSLGLGEVPAN------------------------------- 80 Query: 190 KSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDG--S 363 L+R++E ELIH RWAMLA G + E L W A + + G + Sbjct: 81 -------------LERYKESELIHCRWAMLAVPGIIVPEALGLGNWVKAQEWAAIPGGQA 127 Query: 364 SYLGQPLPF-TITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAADPEKKE 540 +YLGQP+P+ T+ T++ IE L I ++E QR+ E D E++ YPGG+ FDPLG + DP K E Sbjct: 128 TYLGQPVPWGTLPTILAIEFLAIAFVEHQRSMEKDSEKKKYPGGA-FDPLGYSKDPAKFE 186 Query: 541 TLQLAEIKH 567 L++ EIK+ Sbjct: 187 ELKVKEIKN 195
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 93.2 bits (230), Expect = 5e-19 Identities = 67/212 (31%), Positives = 93/212 (43%), Gaps = 32/212 (15%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 +LDG+L GD+GFDP GLGK +L++ Sbjct: 75 WLDGSLPGDFGFDPLGLGKDPAFLKW---------------------------------- 100 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPF 390 +RE ELIHGRWAMLA LG + TG+ W +AG + G PF Sbjct: 101 ---------YREAELIHGRWAMLAVLGIFVGQAWTGIPWFEAG--------ADPGAVAPF 143 Query: 391 TITTLIWIEVLVIGYIEFQRNAE-LDPERRL----------------------YPGGSYF 501 + TL+ ++L++G++E +R + DP+ + YPGG +F Sbjct: 144 SFGTLLGTQLLLMGWVESKRWVDFFDPDSQSVEWATPWSRTAENFSNSTGEQGYPGGKFF 203 Query: 502 DPLGLAA---------DPEKKETLQLAEIKHA 570 DPL LA D +K E L+LAEIKHA Sbjct: 204 DPLSLAGTISNGVYNPDTDKLERLKLAEIKHA 235
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 90.1 bits (222), Expect = 4e-18 Identities = 65/212 (30%), Positives = 92/212 (43%), Gaps = 32/212 (15%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 +LDG+L GDYGFDP GLGK +L++ Sbjct: 70 WLDGSLPGDYGFDPLGLGKDPAFLKW---------------------------------- 95 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPF 390 +RE ELIHGRWAM A LG + +G+ W +AG + G PF Sbjct: 96 ---------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAG--------ADPGAIAPF 138 Query: 391 TITTLIWIEVLVIGYIEFQRNAE-LDPERRL----------------------YPGGSYF 501 + TL+ +++++G++E +R + DP+ + YPGG +F Sbjct: 139 SFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFF 198 Query: 502 DPLGLAA---------DPEKKETLQLAEIKHA 570 DPL LA D EK E L++AEIKHA Sbjct: 199 DPLALAGTLNNGVYVPDTEKLERLKVAEIKHA 230
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 84.3 bits (207), Expect = 2e-16 Identities = 62/212 (29%), Positives = 88/212 (41%), Gaps = 32/212 (15%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 +LDG+L GD+GFDP GLGK +L++ Sbjct: 70 WLDGSLPGDFGFDPLGLGKDPAFLKW---------------------------------- 95 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPF 390 +RE ELIHGRWAM A LG + +G+ W +AG G PF Sbjct: 96 ---------YREAELIHGRWAMAAVLGIFVGQAWSGIPWFEAGADP--------GAIAPF 138 Query: 391 TITTLIWIEVLVIGYIEFQRNAELDPE-----------------------RRLYPGGSYF 501 + +L+ ++L++G++E +R + + YPGG +F Sbjct: 139 SFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFF 198 Query: 502 DPLGLAA---------DPEKKETLQLAEIKHA 570 DPL LA D EK E L+LAEIKH+ Sbjct: 199 DPLALAGTLNNGVYVPDTEKLERLKLAEIKHS 230
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 84.3 bits (207), Expect = 2e-16 Identities = 61/190 (32%), Positives = 86/190 (45%), Gaps = 11/190 (5%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL+G + GDYG+DPFGLGK E Sbjct: 84 YLNGEVAGDYGYDPFGLGKKPE-------------------------------------- 105 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVDGSS 366 +++ ELIH RWAML G + E L W G + L+DG++ Sbjct: 106 -----NFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL-LLDGNT 159 Query: 367 --YLGQPLPFTITTLIWIEVLVIGYIEFQRNAE-LDPERRLYPGGSYFDPLGLAADPEKK 537 Y G+ +P + + EV+++G E+ R LD E +L+PGG FDPLGLA DPE+ Sbjct: 160 LNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGP-FDPLGLAKDPEQG 218 Query: 538 ETLQLAEIKH 567 L++ EIK+ Sbjct: 219 ALLKVKEIKN 228
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 70.5 bits (171), Expect = 3e-12 Identities = 63/194 (32%), Positives = 78/194 (40%), Gaps = 15/194 (7%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL+G GDYG+D GL E Sbjct: 69 YLNGEFPGDYGWDTAGLSADPE-------------------------------------- 90 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWL---TGV-----TWQDAGKVELVDGS- 363 R R E+IHGRWAML LG + E L GV W AG +G Sbjct: 91 -----AFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGL 145 Query: 364 SYLGQPLPF---TITTLIWIEVLVIGYIEFQRNAELD---PERRLYPGGSYFDPLGLAAD 525 YLG P +I ++ +VL++G +E R LD LYPGG YFDPLGLA D Sbjct: 146 DYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGLADD 205 Query: 526 PEKKETLQLAEIKH 567 P L++ EIK+ Sbjct: 206 PVTFAELKVKEIKN 219
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 69.7 bits (169), Expect = 6e-12 Identities = 59/209 (28%), Positives = 85/209 (40%), Gaps = 24/209 (11%) Frame = +1 Query: 13 GRAGARYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVK 192 G +LDG+L GD+GFDP GLG E L+++ Sbjct: 71 GSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNA-------------------------- 104 Query: 193 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGV------TWQDAGKVELV 354 + EL+H RWAML G E+LT + +W AG+ E Sbjct: 105 -----------------QAELVHSRWAMLGAAGIFIPEFLTKIGVLNTPSWYTAGEQEYF 147 Query: 355 DGSSYLGQPLPFTITTLIWIEVLVIGYIEFQRNAE-----------LDPERRL------Y 483 + TTL IE+++IG+ E +R A+ + P +L Y Sbjct: 148 TDT-----------TTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGY 196 Query: 484 PGGSYFDPLGL-AADPEKKETLQLAEIKH 567 PGG +FDPLG + P K + L+ EIK+ Sbjct: 197 PGGLWFDPLGWGSGSPAKIKELRTKEIKN 225 Score = 30.8 bits (68), Expect = 2.9 Identities = 14/29 (48%), Positives = 18/29 (62%) Frame = +1 Query: 484 PGGSYFDPLGLAADPEKKETLQLAEIKHA 570 PG FDPLGL +DPE + AE+ H+ Sbjct: 83 PGDFGFDPLGLGSDPESLKWNAQAELVHS 111
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 69.7 bits (169), Expect = 6e-12 Identities = 60/165 (36%), Positives = 79/165 (47%), Gaps = 17/165 (10%) Frame = +1 Query: 124 DQNLAQNLAGEIIGTRFEDADVKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTV 303 + + + L GE G D S Q +A R+RE ELIH RWA+L LG LT Sbjct: 47 ENDTPEYLTGEFPGDYGWDTAGLSADPQTFA------RYREIELIHARWALLGALGILTP 100 Query: 304 EWLT---GV-----TWQDAGKVELVDGS-SYLGQPLPF---TITTLIWIEVLVIGYIEFQ 447 E L+ GV W AG DG +YLG +I + ++V+++G E Sbjct: 101 ELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAY 160 Query: 448 R-----NAELDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIKH 567 R LD LYPGG FDPLGLA DP+ L++ EIK+ Sbjct: 161 RANGGSEGFLDDLDTLYPGGP-FDPLGLADDPDTFAELKVKEIKN 204
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 69.7 bits (169), Expect = 6e-12 Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 15/126 (11%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L GV W AG DG YLG P Sbjct: 94 RNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 153 Query: 391 TITTLIWI---EVLVIGYIEFQRNAELDP----ERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A P E LYPGGS FDPLGLA DPE L+ Sbjct: 154 HAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 212 Query: 550 LAEIKH 567 + E+K+ Sbjct: 213 VKELKN 218
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 69.7 bits (169), Expect = 6e-12 Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 15/126 (11%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L GV W AG DG YLG P Sbjct: 94 RNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLV 153 Query: 391 TITTLIWI---EVLVIGYIEFQRNAELDP----ERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A P E LYPGGS FDPLGLA DPE L+ Sbjct: 154 HAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 212 Query: 550 LAEIKH 567 + E+K+ Sbjct: 213 VKELKN 218
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 67.8 bits (164), Expect = 2e-11 Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 15/126 (11%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 93 RNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLV 152 Query: 391 TITTLIWI---EVLVIGYIEFQRNAELDP----ERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A P E LYPGGS FDPLGLA DPE L+ Sbjct: 153 HAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGS-FDPLGLATDPEAFAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 67.8 bits (164), Expect = 2e-11 Identities = 52/130 (40%), Positives = 70/130 (53%), Gaps = 18/130 (13%) Frame = +1 Query: 232 QRFRECELIHGRWAMLATLGALTVEWLT---GV-----TWQDAG-KVELVDGSSYLGQPL 384 +++RE E+IH RWA+L LG LT E L+ GV W AG ++ G YLG P Sbjct: 82 KKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPA 141 Query: 385 PF---TITTLIWIEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKK 537 I + ++V+++G IE R LDP LYPG S FDPLGLA DP+ Sbjct: 142 LIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDP---LYPGES-FDPLGLADDPDTF 197 Query: 538 ETLQLAEIKH 567 L++ EIK+ Sbjct: 198 AELKVKEIKN 207
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 67.8 bits (164), Expect = 2e-11 Identities = 66/196 (33%), Positives = 85/196 (43%), Gaps = 17/196 (8%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL+G GDYG+D GL E A+N Sbjct: 71 YLNGEFAGDYGWDTAGLSSDPE-----------TFARN---------------------- 97 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAG-KVELVDGSS 366 RE E+IH RWAML LG LT E L +GV W AG ++ G Sbjct: 98 ----------RELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAGAQIFSEGGLD 147 Query: 367 YLGQPLPFTITTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLA 519 YLG P ++ IW +V+++G +E R A DP +YPGGS FDPLGLA Sbjct: 148 YLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVTDP---IYPGGS-FDPLGLA 203 Query: 520 ADPEKKETLQLAEIKH 567 DP+ L++ EIK+ Sbjct: 204 DDPDTFAELKVKEIKN 219
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 67.4 bits (163), Expect = 3e-11 Identities = 64/193 (33%), Positives = 82/193 (42%), Gaps = 14/193 (7%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL G GDYG+D GL E A+N Sbjct: 68 YLSGEFPGDYGWDTAGLSADPE-----------TFAKN---------------------- 94 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVDGS-S 366 RE E+IH RWAML LG +T E L GV W AG +G Sbjct: 95 ----------RELEVIHSRWAMLGALGCVTPELLAKNGVKFGEAVWFKAGSQIFAEGGLD 144 Query: 367 YLGQPLPFTITTL--IW-IEVLVIGYIEFQRNAE---LDPERRLYPGGSYFDPLGLAADP 528 YLG P ++ IW +V+++G +E R A + E +YPGGS FDPLGLA DP Sbjct: 145 YLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGS-FDPLGLADDP 203 Query: 529 EKKETLQLAEIKH 567 E L++ E+K+ Sbjct: 204 EAFAELKVKELKN 216
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 67.0 bits (162), Expect = 4e-11 Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 94 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 153 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE+ L+ Sbjct: 154 QSILSIWATQVILMGAVEGYRVAGGPLGEIVDP---LYPGGS-FDPLGLAEDPERSAELK 209 Query: 550 LAEIKH 567 + E+K+ Sbjct: 210 VKELKN 215
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 67.0 bits (162), Expect = 4e-11 Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 15/124 (12%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTG--------VTWQDAGKVELVDGS-SYLGQPLPF- 390 R E+IHGRWAML LG + E L W AG DG YLG P Sbjct: 93 RALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVH 152 Query: 391 --TITTLIWIEVLVIGYIE-FQRNA--ELDPERRLYPGGSYFDPLGLAADPEKKETLQLA 555 +I ++ +V+++G +E F+ N + LYPGG YFDPLGLA DP L++ Sbjct: 153 AQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVK 212 Query: 556 EIKH 567 EIK+ Sbjct: 213 EIKN 216
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 67.0 bits (162), Expect = 4e-11 Identities = 52/129 (40%), Positives = 65/129 (50%), Gaps = 17/129 (13%) Frame = +1 Query: 232 QRFRECELIHGRWAMLATLGALTVEWLT-------GVTWQDAG-KVELVDGSSYLGQPL- 384 +R+RE ELIH RWAML LG T E L W AG ++ G YLG P Sbjct: 80 KRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSL 139 Query: 385 --PFTITTLIWIEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKE 540 I ++V+++G IE R LDP LYPG S FDPLGLA DP+ Sbjct: 140 VHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDP---LYPGES-FDPLGLADDPDTFA 195 Query: 541 TLQLAEIKH 567 L++ EIK+ Sbjct: 196 ELKVKEIKN 204
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 66.6 bits (161), Expect = 5e-11 Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 91 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 150 Query: 397 TTL--IW-IEVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW ++V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 151 QSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 206 Query: 550 LAEIKH 567 + EIK+ Sbjct: 207 VKEIKN 212
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 65.5 bits (158), Expect = 1e-10 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154 Query: 397 TTL--IW-IEVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW ++V+++G +E R A +DP LYPGG+ FDPLGLA DPE L+ Sbjct: 155 QSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGA-FDPLGLADDPEAFAELK 210 Query: 550 LAEIKH 567 + EIK+ Sbjct: 211 VKEIKN 216
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 65.1 bits (157), Expect = 1e-10 Identities = 51/128 (39%), Positives = 67/128 (52%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG E L GV W AG +G YLG P Sbjct: 93 RNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLI 152 Query: 391 TITTL--IW-IEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 ++ IW +V+++G++E R LDP LYPGG+ FDPLGLA DP+ Sbjct: 153 HAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDP---LYPGGA-FDPLGLADDPDSFAE 208 Query: 544 LQLAEIKH 567 L++ E+K+ Sbjct: 209 LKVKELKN 216
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 64.7 bits (156), Expect = 2e-10 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 99 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 158 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 159 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 214 Query: 550 LAEIKH 567 + E+K+ Sbjct: 215 VKELKN 220
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 64.7 bits (156), Expect = 2e-10 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GVT-----WQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L+ GVT W AG +G YLG P Sbjct: 65 RNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLI 124 Query: 391 TITTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 +++ I +V+++G++E R LD ++YPGG+ FDPLGLA DPE Sbjct: 125 HAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLD---KIYPGGA-FDPLGLADDPEAFAE 180 Query: 544 LQLAEIKH 567 L++ EIK+ Sbjct: 181 LKVKEIKN 188
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 64.7 bits (156), Expect = 2e-10 Identities = 65/196 (33%), Positives = 82/196 (41%), Gaps = 17/196 (8%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL G GDYG+D GL E N A+N Sbjct: 77 YLTGEFPGDYGWDTAGLSADPE-----------NFAKN---------------------- 103 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-S 366 RE E+IH RWAML LG + E L GV W AG +G Sbjct: 104 ----------RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLD 153 Query: 367 YLGQPLPFTITTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLA 519 YLG P +++ I +V+++G +E R A DP +YPGGS FDPLGLA Sbjct: 154 YLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLGLA 209 Query: 520 ADPEKKETLQLAEIKH 567 DPE L++ EIK+ Sbjct: 210 EDPEAFAELKVKEIKN 225
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 64.7 bits (156), Expect = 2e-10 Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAG-KVELVDGSSYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG ++ G YLG P Sbjct: 94 RELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHA 153 Query: 397 TTL--IW-IEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G IE R LDP LYPGG+ FDPLGLA DPE L+ Sbjct: 154 QSILAIWATQVVLMGLIEGYRVGGGPLGEGLDP---LYPGGA-FDPLGLADDPEAFAELK 209 Query: 550 LAEIKH 567 + EIK+ Sbjct: 210 VKEIKN 215
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 64.7 bits (156), Expect = 2e-10 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 98 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 157 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 158 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 213 Query: 550 LAEIKH 567 + E+K+ Sbjct: 214 VKELKN 219
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 64.7 bits (156), Expect = 2e-10 Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GVT-----WQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L+ GVT W AG +G YLG P Sbjct: 93 RNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLI 152 Query: 391 TITTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 +++ I +V+++G++E R LD ++YPGG+ FDPLGLA DPE Sbjct: 153 HAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLD---KIYPGGA-FDPLGLADDPEAFAE 208 Query: 544 LQLAEIKH 567 L++ EIK+ Sbjct: 209 LKVKEIKN 216
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 64.7 bits (156), Expect = 2e-10 Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 92 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 151 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 152 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 207 Query: 550 LAEIKH 567 + E+K+ Sbjct: 208 VKELKN 213
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 64.3 bits (155), Expect = 2e-10 Identities = 56/203 (27%), Positives = 83/203 (40%), Gaps = 24/203 (11%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 +LDG+L GD+GFDP GL E L+++ Sbjct: 77 WLDGSLPGDFGFDPLGLASDPESLRWN--------------------------------- 103 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGV------TWQDAGKVELVDGSSYL 372 ++ EL+H RWAML G E LT + +W AG+ E + Sbjct: 104 ----------QQAELVHCRWAMLGAAGIFIPELLTKIGILNTPSWYTAGEQEYFTDT--- 150 Query: 373 GQPLPFTITTLIWIEVLVIGYIEFQRNAE-----------LDPERRL------YPGGSYF 501 TTL +E+++IG+ E +R A+ + P +L YPGG +F Sbjct: 151 --------TTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWF 202 Query: 502 DPLGL-AADPEKKETLQLAEIKH 567 DPLG + P K + L+ EIK+ Sbjct: 203 DPLGWGSGSPAKIKELRTKEIKN 225
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 64.3 bits (155), Expect = 2e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 155 QSILAIWACQVILMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 210 Query: 550 LAEIKH 567 + EIK+ Sbjct: 211 VKEIKN 216
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 63.9 bits (154), Expect = 3e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 156 QSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 63.9 bits (154), Expect = 3e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 156 QSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 63.9 bits (154), Expect = 3e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 154 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 210 Query: 550 LAEIKH 567 + EIK+ Sbjct: 211 VKEIKN 216
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 63.9 bits (154), Expect = 3e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVILMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 63.9 bits (154), Expect = 3e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 63.5 bits (153), Expect = 4e-10 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 93 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 152 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A DP +YPGGS FDPLGLA DPE L+ Sbjct: 153 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLGLADDPEAFAELK 208 Query: 550 LAEIKH 567 + E+K+ Sbjct: 209 VKELKN 214
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 63.5 bits (153), Expect = 4e-10 Identities = 50/126 (39%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 86 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 145 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A DP +YPGGS FDPLGLA DPE L+ Sbjct: 146 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLGLADDPEALAELK 201 Query: 550 LAEIKH 567 + E+K+ Sbjct: 202 VKELKN 207
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 63.5 bits (153), Expect = 4e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 63.5 bits (153), Expect = 4e-10 Identities = 52/126 (41%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 63.2 bits (152), Expect = 5e-10 Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G IE R A DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAIEGYRVAGGPLGEVTDP---LYPGGS-FDPLGLADDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 62.8 bits (151), Expect = 7e-10 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--------GVTWQDAGKVELVDGSSYLGQPLPFTI 396 RE E+IHGRWAML LG + E L V ++ ++ G YLG P Sbjct: 94 RELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKGSQIFSEGGLQYLGNPSLVHA 153 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A +DP LYPGGS FDPLGLA D E L+ Sbjct: 154 QSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLADDAEAFAELK 209 Query: 550 LAEIKH 567 + EIK+ Sbjct: 210 VKEIKN 215
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 62.8 bits (151), Expect = 7e-10 Identities = 49/126 (38%), Positives = 68/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 95 RELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 154 Query: 397 TTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G++E R LDP +YPGG+ FDPLGLA DP+ L+ Sbjct: 155 QSILAIWACQVVLMGFVEGYRVGGGPLGEGLDP---IYPGGA-FDPLGLADDPDAFAELK 210 Query: 550 LAEIKH 567 + EIK+ Sbjct: 211 VKEIKN 216
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 62.8 bits (151), Expect = 7e-10 Identities = 48/126 (38%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--------GVTWQDAGKVELVDGSSYLGQPLPFTI 396 RE E+IH RWAML LG + E L V ++ ++ G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGGSQIFSQGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGEPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 62.8 bits (151), Expect = 7e-10 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 85 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 144 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A DP +YPGGS FDPLGLA DPE L+ Sbjct: 145 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLGLADDPEAFAELK 200 Query: 550 LAEIKH 567 + E+K+ Sbjct: 201 VKELKN 206
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 62.4 bits (150), Expect = 9e-10 Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E GV W AG +G YLG P Sbjct: 96 RELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 155 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 156 QSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGS-FDPLGLADDPEAFAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 62.4 bits (150), Expect = 9e-10 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 95 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G IE R A +DP LYPGG+ FDPLGLA DPE ++ Sbjct: 155 QSILAIWACQVVLMGAIEGYRVAGGPLGEVVDP---LYPGGT-FDPLGLADDPEAFADVK 210 Query: 550 LAEIKH 567 + E+K+ Sbjct: 211 VKELKN 216
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 62.4 bits (150), Expect = 9e-10 Identities = 50/128 (39%), Positives = 69/128 (53%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 93 RNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLV 152 Query: 391 TITTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 +++ I +V+++G++E R LD ++YPGG+ FDPLGLA DPE Sbjct: 153 HAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLD---KIYPGGA-FDPLGLADDPEAFAE 208 Query: 544 LQLAEIKH 567 L++ EIK+ Sbjct: 209 LKVKEIKN 216
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 62.4 bits (150), Expect = 9e-10 Identities = 51/125 (40%), Positives = 66/125 (52%), Gaps = 17/125 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 95 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHA 154 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 155 QSILAIWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLADDPEAFGELK 210 Query: 550 LAEIK 564 + E+K Sbjct: 211 VKELK 215
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 62.4 bits (150), Expect = 9e-10 Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 19/131 (14%) Frame = +1 Query: 232 QRFRECELIHGRWAMLATLGALTVEWLT---------GVTWQDAGKVELVDGS-SYLGQP 381 +R+RE ELIH R +L LG +T E L W AG DG +YLG P Sbjct: 99 KRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNP 158 Query: 382 LPF---TITTLIWIEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEK 534 I + ++V+++G +E R LDP LYPG + FDPLGLA DP+ Sbjct: 159 SLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDP---LYPGEA-FDPLGLADDPDT 214 Query: 535 KETLQLAEIKH 567 L++ EIK+ Sbjct: 215 FAELKVKEIKN 225
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 62.4 bits (150), Expect = 9e-10 Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAG-KVELVDGSSYLGQPLPF 390 R RE E+IH RWAML LG + E L+ GV W AG ++ G YLG P Sbjct: 91 RNRELEVIHSRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLV 150 Query: 391 TITTL--IW-IEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 ++ IW ++V+++G++E R LD ++YPGG+ FDPLGLA DP+ Sbjct: 151 HAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLD---KVYPGGA-FDPLGLADDPDTFAE 206 Query: 544 LQLAEIKH 567 L++ E+K+ Sbjct: 207 LKVKELKN 214
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 62.0 bits (149), Expect = 1e-09 Identities = 51/126 (40%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELK 212 Query: 550 LAEIKH 567 + IK+ Sbjct: 213 VKHIKN 218
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 62.0 bits (149), Expect = 1e-09 Identities = 49/126 (38%), Positives = 64/126 (50%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTG-------VTWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGS-FDPLGLAEDPEAFAELK 212 Query: 550 LAEIKH 567 + EIK+ Sbjct: 213 VKEIKN 218
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 62.0 bits (149), Expect = 1e-09 Identities = 51/126 (40%), Positives = 65/126 (51%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E GV W AG +G YLG P Sbjct: 97 RELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHA 156 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +VL++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 157 QSILAIWACQVLLMGAVEGYRVAGGPLGVVVDP---LYPGGS-FDPLGLAEDPEAFAELK 212 Query: 550 LAEIKH 567 + E K+ Sbjct: 213 VKETKN 218
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 61.6 bits (148), Expect = 2e-09 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 58 RELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 117 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G +E R A +DP LYPGGS FDPLGLA PE L+ Sbjct: 118 QSILAIWATQVILMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEVPEAFAELK 173 Query: 550 LAEIKH 567 + E+K+ Sbjct: 174 VKELKN 179
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 61.6 bits (148), Expect = 2e-09 Identities = 53/126 (42%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGVT-----WQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG DG YLG P Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHA 155 Query: 397 TTL--IW-IEVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +L IW +V+++G +E R A +DP LYPGGS FDPLGLA P+ L+ Sbjct: 156 QSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDP---LYPGGS-FDPLGLAERPQAFAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 61.6 bits (148), Expect = 2e-09 Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAG-KVELVDGSSYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG ++ G YLG P Sbjct: 108 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHA 167 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G IE R A DP +YPGG+ FDPLGLA DP+ L+ Sbjct: 168 QSILAIWACQVILMGAIEGYRVAGGPLGEVTDP---IYPGGN-FDPLGLADDPDAFAELK 223 Query: 550 LAEIKH 567 + EIK+ Sbjct: 224 VKEIKN 229
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 61.2 bits (147), Expect = 2e-09 Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 17/128 (13%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPF 390 R RE E+IH RWAML LG + E L+ GV W AG +G YLG P Sbjct: 93 RNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLI 152 Query: 391 TITTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKET 543 +++ + +V+++G IE R LD ++YPGG+ FDPLGLA DPE Sbjct: 153 HAQSILAVWASQVVLMGLIEGYRVGGGPLGEGLD---KIYPGGA-FDPLGLADDPEAFAE 208 Query: 544 LQLAEIKH 567 L++ EIK+ Sbjct: 209 LKVKEIKN 216
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 60.5 bits (145), Expect = 3e-09 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH WAML LG + E L+ GV W AG +G YLG P Sbjct: 36 RELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHA 95 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A DP +YPGGS FDPLGLA DPE L+ Sbjct: 96 QSILAIWACQVVLMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLGLADDPEAFAELK 151 Query: 550 LAEIKH 567 + E+K+ Sbjct: 152 VKELKN 157
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 60.5 bits (145), Expect = 3e-09 Identities = 50/126 (39%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAG-KVELVDGSSYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG ++ G YLG P Sbjct: 108 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHA 167 Query: 397 TTL--IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 ++ IW +V+++G IE R A DP +YPGG+ FDPLGLA DP+ ++ Sbjct: 168 QSILAIWACQVILMGAIEGYRVAGGPLGEVTDP---IYPGGN-FDPLGLADDPDAFADVK 223 Query: 550 LAEIKH 567 + EIK+ Sbjct: 224 VKEIKN 229
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 59.7 bits (143), Expect = 6e-09 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 R+ E+IH RW ML LG + E GV W AG +G YLG P Sbjct: 96 RKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHA 155 Query: 397 TTLIWI---EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G +E R A +DP LYPGGS FDPLGLA DPE L+ Sbjct: 156 QSILAIWACQVVLMGAVEGYRVAGGPLGEVIDP---LYPGGS-FDPLGLADDPEAFAELE 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 59.3 bits (142), Expect = 8e-09 Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVDGS-SYLG-QPLPFT 393 RE E+IH RWAML LG + E L GV +W AG +G YLG Q L Sbjct: 75 RELEVIHSRWAMLGALGCVFPELLARNGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHA 134 Query: 394 ITTL-IW-IEVLVIGYIEFQRNA------ELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 + L IW +V+++G +E R A DP +YPGGS FDPL LA DPE L+ Sbjct: 135 QSILAIWATQVILMGAVEGYRIAGGPLGEVTDP---IYPGGS-FDPLALADDPEAFAELK 190 Query: 550 LAEIKH 567 + EIK+ Sbjct: 191 VKEIKN 196
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 57.8 bits (138), Expect = 2e-08 Identities = 48/126 (38%), Positives = 62/126 (49%), Gaps = 17/126 (13%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTG-------VTWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L W AG +G Y G P Sbjct: 96 RELEVIHCRWAMLGALGCVFPELLAKNGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHA 155 Query: 397 TTLIWI---EVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPEKKETLQ 549 +++ I +V+++G IE R LDP L PGG+ FDPLGLA DPE L+ Sbjct: 156 QSILAIWACQVVLMGLIEGYRVGGGTLGEGLDP---LLPGGA-FDPLGLADDPEACAELK 211 Query: 550 LAEIKH 567 + EIK+ Sbjct: 212 VKEIKN 217
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 57.0 bits (136), Expect = 4e-08 Identities = 56/199 (28%), Positives = 72/199 (36%), Gaps = 23/199 (11%) Frame = +1 Query: 13 GRAGARYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVK 192 G A YL G+L GD GFDP GL + E L++ Sbjct: 60 GLASPDYLTGSLAGDNGFDPLGLAEDPENLKW---------------------------- 91 Query: 193 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGV------TWQDAGKVELV 354 F + EL++GRWAML G L E T + W DAGK + Sbjct: 92 ---------------FVQAELVNGRWAMLGVAGMLLPEVFTKIGIINVPEWYDAGKEQYF 136 Query: 355 DGSSYLGQPLPFTITTLIWIEVLVIGYIEFQR--------NAELDPERRL---------Y 483 SS TL IE ++ Y+E +R + DP + Y Sbjct: 137 ASSS-----------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGY 185 Query: 484 PGGSYFDPLGLAADPEKKE 540 PGG F+PL A E KE Sbjct: 186 PGG-IFNPLNFAPTQEAKE 203
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 55.1 bits (131), Expect = 1e-07 Identities = 47/114 (41%), Positives = 59/114 (51%), Gaps = 17/114 (14%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWL--TGV-----TWQDAGKVELVDGS-SYLGQPLPFTI 396 RE E+IH RWAML LG + E L GV W AG +G YLG P Sbjct: 94 RELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHA 153 Query: 397 TTL--IW-IEVLVIGYIEFQR------NAELDPERRLYPGGSYFDPLGLAADPE 531 ++ IW +V+++G +E R LD +LYPGG+ FDPLGLA DPE Sbjct: 154 QSILAIWACQVVLMGAVEGYRVGGGPLGEGLD---QLYPGGA-FDPLGLAEDPE 203
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 55.1 bits (131), Expect = 1e-07 Identities = 56/207 (27%), Positives = 80/207 (38%), Gaps = 28/207 (13%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YLDG L GD+GFDP GL P + G I +P Sbjct: 65 YLDGRLPGDFGFDPLGLSDP----------------EGTGGFI---------------EP 93 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWL---------TGVTWQDAGKVELVDGS 363 +G E+I+GR+AML GA+ E L T + W G + Sbjct: 94 KWLAYG-------EVINGRFAMLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTY 146 Query: 364 SYLGQPLPFTITTLIWIEVLVIGYIEFQRNAE------------LDPERRL-------YP 486 +Y TL +E+ ++G+ E +R + L E+ L YP Sbjct: 147 NYWADNY-----TLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYP 201 Query: 487 GGSYFDPLGLAADPEKKETLQLAEIKH 567 GG F+PLG D + + L+L EIK+ Sbjct: 202 GGPLFNPLGFGKDEKSMKELKLKEIKN 228
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 51.2 bits (121), Expect = 2e-06 Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 17/158 (10%) Frame = +1 Query: 145 LAGEIIGTRFEDADVKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLT--- 315 L GE G D + S + +A + RE E+IH RWA+ LG + E L Sbjct: 68 LTGEFPGDYGWDTEGLSADPETFA------KNRELEVIHCRWAIAVGLGCVFPELLARNG 121 Query: 316 -----GVTWQDAGKVELVDGSSYLGQPLPFTITTLIWI---EVLVIGYIEFQRNAE---- 459 GV ++ ++ G S+ G P +++ I +V+++G +E A Sbjct: 122 VKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLG 181 Query: 460 --LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIKH 567 +DP LY GGS FDPLGL DPE+ L++ EIK+ Sbjct: 182 EVVDP---LYLGGS-FDPLGLGDDPERFAELKVKEIKN 215
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 48.9 bits (115), Expect = 1e-05 Identities = 58/196 (29%), Positives = 76/196 (38%), Gaps = 17/196 (8%) Frame = +1 Query: 31 YLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLAQNLAGEIIGTRFEDADVKSTPFQP 210 YL G GDYG+D GL Sbjct: 72 YLTGEFPGDYGWDTAGL-----------------------------------------SA 90 Query: 211 YAEVFGLQRFRECELIHGRWAMLATLGALTVEWLT-------GVTWQDAG-KVELVDGSS 366 Y E F + RE E+IH R AM A LG + E L+ W AG ++ G Sbjct: 91 YPETFA--KNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLD 148 Query: 367 YLGQPLPFTITTL--IW-IEVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLA 519 YLG P ++ IW +V+++G +E R A DP LYPG FD LGLA Sbjct: 149 YLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDP---LYPGS--FDSLGLA 203 Query: 520 ADPEKKETLQLAEIKH 567 D E L++ E+K+ Sbjct: 204 EDTEAFAELKVKELKN 219
>CB22_PINSY (P15192) Chlorophyll a-b binding protein type 2 member 2| (Chlorophyll a-b binding protein type II 2) (CAB) (LHCP) (Fragment) Length = 150 Score = 45.1 bits (105), Expect = 1e-04 Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 10/91 (10%) Frame = +1 Query: 325 WQDAGKVELVDGS-SYLGQPLPFTITTLIWI---EVLVIGYIEFQR------NAELDPER 474 W AG +G YLG P +++ I +V+++G IE R LDP Sbjct: 15 WFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDP-- 72 Query: 475 RLYPGGSYFDPLGLAADPEKKETLQLAEIKH 567 LYPG + FDPLGLA DPE K L++ EIK+ Sbjct: 73 -LYPGDA-FDPLGLADDPEAKAELKVKEIKN 101
>CB21_EUGGR (P12327) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 127 Score = 42.0 bits (97), Expect = 0.001 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 6/65 (9%) Frame = +1 Query: 391 TITTLIWIEVLVIGYIEFQRNAELDPER------RLYPGGSYFDPLGLAADPEKKETLQL 552 ++ ++ +VL++G +E R P + RLYPGG FDPLGLA DP+ L++ Sbjct: 10 SLLAILATQVLLMGAVEGYRAGNTAPGQFGEDLDRLYPGGP-FDPLGLADDPDTFPELKV 68 Query: 553 AEIKH 567 EIK+ Sbjct: 69 KEIKN 73
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 42.0 bits (97), Expect = 0.001 Identities = 36/97 (37%), Positives = 44/97 (45%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFTITTLIWI 414 R R E+ HGR AML T+G + E L W +AG + VDG + T W Sbjct: 224 RMRVAEVFHGRLAMLCTVGCIVPELLGKGAWFEAG--DSVDGLKLGFITMAIAAPTEYWR 281 Query: 415 EVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAAD 525 G +Q+ ELD R YPG FDPL L D Sbjct: 282 GQ---GGFNWQK-GELD---RSYPG---FDPLNLTTD 308 Score = 41.6 bits (96), Expect = 0.002 Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 2/143 (1%) Frame = +1 Query: 145 LAGEIIGTR-FEDADVKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGV 321 L GE G R F+ A + + P + F +R R E+ HGR AMLA +GAL ++L Sbjct: 15 LNGEYYGDRGFDPAGLAADP-----DTF--ERMRIAEVYHGRLAMLAVVGALVPDYLGKG 67 Query: 322 TWQDAGKVELVDGSSYLGQPLPFTITTLIWIEVLVIGYIEFQRNA-ELDPERRLYPGGSY 498 W +A + + L + FT G E R E +YPG Sbjct: 68 IWYEAAQ----NAGIGLKEVAIFT---------AAYGVFEVARGVKENSDPTTIYPG--- 111 Query: 499 FDPLGLAADPEKKETLQLAEIKH 567 FDPL L D K+ AEIK+ Sbjct: 112 FDPLNLTTDYTKE-----AEIKN 129 Score = 40.0 bits (92), Expect = 0.005 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 6/115 (5%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFTITTLIWIEV 420 R E+ +GR A+ A G LT ++L G+ L + S++L P+ ITT + + Sbjct: 311 RAAEVKNGRLALTAVAG-LTAQYLA------TGESPLANLSAHLANPIGANITTNL--AM 361 Query: 421 LVIGYIEFQRNA---ELDPERRLYP---GGSYFDPLGLAADPEKKETLQLAEIKH 567 + +R + P R L G FDP GLAADP E +Q+AE+ H Sbjct: 362 FASSGAKEERELWFPNIVPPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFH 416 Score = 36.2 bits (82), Expect = 0.068 Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 8/117 (6%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFTITTLIWIEV 420 +E E+ +GR A+ A LG + G + L + + +L QPL I I + Sbjct: 123 KEAEIKNGRLALTALLGFEVQRHVVGGS-------PLANLAEHLQQPLQRNIADSIMHQW 175 Query: 421 LVIGYIEFQRNAEL-----DPERRL---YPGGSYFDPLGLAADPEKKETLQLAEIKH 567 V + L +P L YP FDPL LAADP+ +++AE+ H Sbjct: 176 PVAMFASSGHKDGLWFPNAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFH 232
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +1 Query: 406 IWI-EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 564 IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L++ EIK Sbjct: 162 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELKVKEIK 217 Query: 565 H 567 + Sbjct: 218 N 218
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +1 Query: 406 IWI-EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 564 IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L++ EIK Sbjct: 162 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELKVKEIK 217 Query: 565 H 567 + Sbjct: 218 N 218
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 41.6 bits (96), Expect = 0.002 Identities = 40/123 (32%), Positives = 59/123 (47%), Gaps = 12/123 (9%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLTGVTWQDAG-KVELVDGSSYLGQPLPFTITTLIW 411 R RE E HGR AMLA+LG + E + D G +E + LP+ + ++ Sbjct: 62 RLREAETTHGRVAMLASLGFVVQEKFHPLFSGDNGPAIEQI-------PQLPYWLWIVMT 114 Query: 412 IEVLVIGYIEFQRN-AELDPE--------RRLY-PGGSYFDPLGLA-ADPEKKETLQLAE 558 I + Q+ A+++PE R Y PG FDPLGLA +DP++ +Q E Sbjct: 115 IGIGRAELFRIQKGWAKVNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKE 174 Query: 559 IKH 567 + H Sbjct: 175 LSH 177 Score = 31.6 bits (70), Expect = 1.7 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +1 Query: 241 RECELIHGRWAMLATLGALTVEWLTGVTW 327 +E EL HGR AM+A G L E ++G TW Sbjct: 171 QEKELSHGRLAMIAAAGFLAQEAVSGDTW 199
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +1 Query: 406 IWI-EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 564 IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L++ EIK Sbjct: 160 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELKVKEIK 215 Query: 565 H 567 + Sbjct: 216 N 216
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +1 Query: 406 IWI-EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 564 IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L++ EIK Sbjct: 160 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELKVKEIK 215 Query: 565 H 567 + Sbjct: 216 N 216
>CB2D_LYCES (P10707) Chlorophyll a-b binding protein 1D (LHCII type I CAB-1D)| (LHCP) (Fragment) Length = 116 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 7/61 (11%) Frame = +1 Query: 406 IWI-EVLVIGYIEFQRNAE------LDPERRLYPGGSYFDPLGLAADPEKKETLQLAEIK 564 IW +V+++G +E R A +DP LYPGGS FDPLGLA DPE L++ EIK Sbjct: 11 IWACQVVLMGAVEGYRIAGGPLGEVVDP---LYPGGS-FDPLGLAEDPEAFAELKVKEIK 66 Query: 565 H 567 + Sbjct: 67 N 67
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 40.8 bits (94), Expect = 0.003 Identities = 41/136 (30%), Positives = 58/136 (42%), Gaps = 18/136 (13%) Frame = +1 Query: 214 AEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG----------VTWQDAGKVELVDGS 363 A V ++R+RE E+ HGR AMLA LG + E L +T Q + + V Sbjct: 83 ATVGDVRRWRESEITHGRVAMLAALGFVVGEQLEDFPAFFNFDGHITGQAIKQFDQVQQG 142 Query: 364 SYLGQPLPFTI-------TTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGL-A 519 + +PL I +L W G+ + +L G YFDPLGL Sbjct: 143 FW--EPLLIAIGLAESYRVSLGWATPTGTGFNNLKDEYDL--------GNLYFDPLGLKP 192 Query: 520 ADPEKKETLQLAEIKH 567 DPE+ LQ E+ + Sbjct: 193 EDPEELRELQTKELNN 208
>CB21_RAPSA (P14584) Chlorophyll a-b binding of LHCII type 1 protein| (Chlorophyll a-b binding of LHCII type I protein) (CAB) (LHCP) (Fragment) Length = 124 Score = 39.3 bits (90), Expect = 0.008 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 7/74 (9%) Frame = +1 Query: 367 YLGQPLPFTITTLIWI---EVLVIGYIEFQRNAELDP----ERRLYPGGSYFDPLGLAAD 525 YLG P +++ I +V+++G +E R A P E LYPGGS FDPL D Sbjct: 3 YLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGS-FDPLASLTD 61 Query: 526 PEKKETLQLAEIKH 567 PE L++ EIK+ Sbjct: 62 PEAFAELKVKEIKN 75
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 35.4 bits (80), Expect = 0.12 Identities = 37/125 (29%), Positives = 50/125 (40%), Gaps = 5/125 (4%) Frame = +1 Query: 181 ADVKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDG 360 AD P A+ R R E+ H R +MLA +G++ E L W + G VDG Sbjct: 178 ADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPELLGKGAWFEVG--NSVDG 235 Query: 361 SSYLGQPLPFTITTLIWIEVLVIGYIEFQR-----NAELDPERRLYPGGSYFDPLGLAAD 525 L +I + + E+ R N + R YPG FDPL L D Sbjct: 236 ------------IKLGFILMAIAAPTEYWRGNGGFNWDKGTADRSYPG---FDPLKLTTD 280 Query: 526 PEKKE 540 K+E Sbjct: 281 YTKRE 285 Score = 31.2 bits (69), Expect = 2.2 Identities = 13/30 (43%), Positives = 19/30 (63%) Frame = +1 Query: 481 YPGGSYFDPLGLAADPEKKETLQLAEIKHA 570 YP FDPL +AADP ++++E+ HA Sbjct: 176 YPADRGFDPLSVAADPTVYARMRVSEVFHA 205
>CYB_TRICS (Q8SEJ1) Cytochrome b| Length = 381 Score = 33.5 bits (75), Expect = 0.44 Identities = 28/113 (24%), Positives = 47/113 (41%), Gaps = 3/113 (2%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +GA VEW+ G D + Sbjct: 123 VMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGATLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYF---DPLGL 516 ++ LPF IT L+ + +L + + ++P+ P Y+ D LGL Sbjct: 183 FI---LPFIITALVLVHLLFLHETGSNNPSGINPDSDKIPFHPYYTIKDALGL 232
>CYB_PETCO (Q9T7P1) Cytochrome b| Length = 379 Score = 33.5 bits (75), Expect = 0.44 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 3/113 (2%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +G + VEW+ G D + Sbjct: 123 VMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTMLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYF---DPLGL 516 ++ LPF IT L + +L + + LDP P Y+ D LG+ Sbjct: 183 FI---LPFIITALAMVHLLFLHETGSNNPSGLDPNADKIPFHPYYTIKDTLGV 232
>CSPG2_HUMAN (P13611) Versican core protein precursor (Large fibroblast| proteoglycan) (Chondroitin sulfate proteoglycan core protein 2) (PG-M) (Glial hyaluronate-binding protein) (GHAP) Length = 3396 Score = 32.7 bits (73), Expect = 0.75 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%) Frame = -1 Query: 398 VIVNGSG*PRYDDPSTS-STLPASCQVTPVSHSTVRAPRVASMAQRPWMSSHSRNLWRPN 222 V++ GSG + D TS ST+P S ++ +S S + + S + P W Sbjct: 1954 VMMEGSGDAAFRDTQTSPSTVPTSVHISHISDSEGPSSTMVSTSAFP---------WEEF 2004 Query: 221 TSA*GWNGVDLTSASSNRVPMISPA 147 TS+ +G L + SS+ VP++ A Sbjct: 2005 TSSAEGSGEQLVTVSSSVVPVLPSA 2029
>FCPD_PHATR (Q08587) Fucoxanthin-chlorophyll a-c binding protein D, chloroplast| precursor Length = 197 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 451 NAELDPERRLYPGGSYFDPLGLAA--DPEKKETLQLAEIKH 567 N + E P +FDPLGL A D EK + L+ EIKH Sbjct: 30 NMAFEDELGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKH 70
>FCPC_PHATR (Q08586) Fucoxanthin-chlorophyll a-c binding protein C, chloroplast| precursor Length = 197 Score = 32.0 bits (71), Expect = 1.3 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 451 NAELDPERRLYPGGSYFDPLGLAA--DPEKKETLQLAEIKH 567 N + E P +FDPLGL A D EK + L+ EIKH Sbjct: 30 NMAFEDELGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKH 70
>YTFM_ECOLI (P0ADE4) Hypothetical protein ytfM precursor| Length = 577 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 9/56 (16%) Frame = -1 Query: 374 PRYDDPSTSSTLPASCQVTP---------VSHSTVRAPRVASMAQRPWMSSHSRNL 234 P++D + LP + V+P V +ST PRV + ++PWM+S+ +L Sbjct: 243 PQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSL 298
>YTFM_ECO57 (P0ADE5) Hypothetical protein ytfM precursor| Length = 577 Score = 32.0 bits (71), Expect = 1.3 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 9/56 (16%) Frame = -1 Query: 374 PRYDDPSTSSTLPASCQVTP---------VSHSTVRAPRVASMAQRPWMSSHSRNL 234 P++D + LP + V+P V +ST PRV + ++PWM+S+ +L Sbjct: 243 PQFDKARETKVLPLTGVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSL 298
>FCPE_PHATR (Q41093) Fucoxanthin-chlorophyll a-c binding protein E, chloroplast| precursor Length = 197 Score = 31.6 bits (70), Expect = 1.7 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 451 NAELDPERRLYPGGSYFDPLGLAA--DPEKKETLQLAEIKH 567 N + E P +FDPLGL A D EK + L+ EIKH Sbjct: 30 NMAFENELGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKH 70
>CYB_ECHKA (Q34473) Cytochrome b| Length = 381 Score = 31.6 bits (70), Expect = 1.7 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +G VEW+ G D + Sbjct: 123 VMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYF---DPLGL 516 ++ LPF IT ++ + +L + + L+P+ P Y+ D LGL Sbjct: 183 FI---LPFIITAMVIVHLLFLHETGSNNPSGLNPDSDKIPFHPYYTIKDALGL 232
>CSPG2_RAT (Q9ERB4) Versican core protein precursor (Large fibroblast| proteoglycan) (Chondroitin sulfate proteoglycan core protein 2) (PG-M) (Glial hyaluronate-binding protein) (GHAP) (Fragments) Length = 2738 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%) Frame = -1 Query: 443 NSMYP-ITSTSIQMSVVIVNGSG*PRYDDPSTSSTLP-ASCQVTPVSHSTVRAPRVASMA 270 +S YP ++ST+++ V + GS R D T S++P S + PV S VAS Sbjct: 1293 SSEYPTVSSTTMKEETVGMGGSENERVKDTQTLSSIPPTSDNINPVPDSKGFGSTVASTT 1352 Query: 269 QRPW 258 PW Sbjct: 1353 AFPW 1356
>FCPF_PHATR (Q41094) Fucoxanthin-chlorophyll a-c binding protein F, chloroplast| precursor Length = 197 Score = 31.2 bits (69), Expect = 2.2 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 451 NAELDPERRLYPGGSYFDPLGLAA--DPEKKETLQLAEIKH 567 N + E P +FDPLGL A D EK + L+ E+KH Sbjct: 30 NMAFESELGAQPPLGFFDPLGLVADGDQEKFDRLRYVELKH 70
>DPOG1_HUMAN (P54098) DNA polymerase gamma subunit 1 (EC 2.7.7.7) (Mitochondrial| DNA polymerase catalytic subunit) (PolG-alpha) Length = 1239 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/71 (28%), Positives = 33/71 (46%) Frame = +1 Query: 331 DAGKVELVDGSSYLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPL 510 + GK +L+ + L + T + IW V + Y+E + A+++ R PG PL Sbjct: 662 EQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAAVPG----QPL 717 Query: 511 GLAADPEKKET 543 L A K+T Sbjct: 718 ALTARGGPKDT 728
>CYB_PERNA (P92717) Cytochrome b| Length = 381 Score = 31.2 bits (69), Expect = 2.2 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +G VEW+ G D + Sbjct: 123 VMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYF---DPLGL 516 ++ LPF +T ++ + +L + + L+P+ P Y+ D LGL Sbjct: 183 FI---LPFIVTAMVIVHLLFLHETGSNNPSGLNPDADKIPFHPYYTIKDALGL 232
>CYB_ISOMA (Q9B2F7) Cytochrome b| Length = 381 Score = 31.2 bits (69), Expect = 2.2 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +G VEW+ G D + Sbjct: 123 VMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYF---DPLGL 516 ++ LPF +T ++ + +L + + L+P+ P Y+ D LGL Sbjct: 183 FI---LPFIVTAMVIVHLLFLHETGSNNPSGLNPDSDKIPFHPYYTIKDALGL 232
>LPFB_SALTY (P43661) Chaperone protein lpfB precursor| Length = 232 Score = 31.2 bits (69), Expect = 2.2 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Frame = -1 Query: 356 STSSTLPA--------SCQVTPVSHSTVRAPRVASMAQRPWMSSHSRNLWRPNTSA*GWN 201 +T++TLP + + P A V +A R + R S GWN Sbjct: 93 NTTNTLPQDRESVYWINVKAIPAKSEDAEAKNVLQIAVRTRLKLFYRPAGLKGNSMDGWN 152 Query: 200 GVDLTSASSNRVPMISPARF 141 + TSA +N++ + +P+ F Sbjct: 153 KLQFTSAGANQIKVENPSAF 172
>VP08_BPAPS (Q9T1U0) Putative protein p8| Length = 87 Score = 29.6 bits (65), Expect = 6.4 Identities = 17/56 (30%), Positives = 29/56 (51%) Frame = +1 Query: 196 TPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGS 363 T F ++ + ++C I G+W L+ +G + ++ GVT +D K L DGS Sbjct: 15 TIFFLFSNSYAFAACQDCVTISGQWVNLSEVGIVVGDYHYGVT-KDNKKFLLTDGS 69
>FCPA_PHATR (Q08584) Fucoxanthin-chlorophyll a-c binding protein A, chloroplast| precursor Length = 196 Score = 29.6 bits (65), Expect = 6.4 Identities = 15/26 (57%), Positives = 18/26 (69%), Gaps = 2/26 (7%) Frame = +1 Query: 496 YFDPLGLAAD--PEKKETLQLAEIKH 567 Y+DPLGL AD EK + L+ EIKH Sbjct: 45 YWDPLGLVADGNQEKFDRLRYVEIKH 70
>CYB_HYPSA (Q7YD73) Cytochrome b (Fragment)| Length = 367 Score = 29.3 bits (64), Expect = 8.3 Identities = 21/81 (25%), Positives = 35/81 (43%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +GA VEW+ G D + Sbjct: 123 VMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGANLVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVI 429 +L LPF I+ L+ + +L + Sbjct: 183 FL---LPFIISALVMVHLLFL 200
>FCP_ODOSI (Q42395) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 203 Score = 29.3 bits (64), Expect = 8.3 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +1 Query: 451 NAELDPERRLYPGGSYFDPLGLA--ADPEKKETLQLAEIKH 567 N + E P +FDPLG+ AD E+ + L+ E+KH Sbjct: 29 NMAFESELGAQPPLGFFDPLGMLADADQERFDRLRYVEVKH 69
>HPLN2_MOUSE (Q9ESM3) Hyaluronan and proteoglycan link protein 2 precursor| (Brain link protein 1) Length = 341 Score = 29.3 bits (64), Expect = 8.3 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = +1 Query: 199 PFQPYAEVFGLQRF---RECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGS 363 P+QP + F R CE GR LAT G L W G+ W +AG L++GS Sbjct: 152 PYQPSRGRYQFNYFEAKRACEEQDGR---LATYGQLYQAWTEGLDWCNAG--WLLEGS 204
>FCPB_PHATR (Q08585) Fucoxanthin-chlorophyll a-c binding protein B, chloroplast| precursor Length = 198 Score = 29.3 bits (64), Expect = 8.3 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 5/74 (6%) Frame = +1 Query: 235 RFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYLGQPLPFTITTLI-- 408 R R E+ HGR +MLA G L E W+ G + L DG+ + P F + I Sbjct: 62 RLRYVEIKHGRISMLAVAGYLAQE----AGWRLGGDIAL-DGTKFADIPNGFAALSAIPQ 116 Query: 409 --WIEVLV-IGYIE 441 I+++ IG++E Sbjct: 117 AGLIQIIAFIGFLE 130
>CCAC_AMPCA (P55738) Caroteno-chlorophyll a-c binding protein (Fragment)| Length = 102 Score = 29.3 bits (64), Expect = 8.3 Identities = 16/39 (41%), Positives = 23/39 (58%) Frame = +1 Query: 202 FQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTG 318 F V ++ + E+ HGR AMLAT+G +T E +TG Sbjct: 20 FTADGSVENFKKLAQTEIKHGRVAMLATMGYITQE-ITG 57
>CP1A1_BALAC (Q3LFU0) Cytochrome P450 1A1 (EC 1.14.14.1)| Length = 516 Score = 29.3 bits (64), Expect = 8.3 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 22/97 (22%) Frame = -1 Query: 455 ALRWNSMYPITSTSIQMSV-----VIVNGSG*PRYDDPSTSSTLPASCQVT--------- 318 A+ W+ MY +TS S+Q + ++ + PR D L A T Sbjct: 329 AISWSLMYLVTSPSVQKKIQEELDTVIGSARQPRLSDRPRLPYLEAFILETFRHSSFLPF 388 Query: 317 PVSHSTVR--------APRVASMAQRPWMSSHSRNLW 231 + HST R P+ + W +H + LW Sbjct: 389 TIPHSTTRDTSLNGFYIPKGRCVFVNQWQINHDQKLW 425
>CYB_SPEPA (Q9TF55) Cytochrome b| Length = 379 Score = 29.3 bits (64), Expect = 8.3 Identities = 29/116 (25%), Positives = 45/116 (38%) Frame = +1 Query: 187 VKSTPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSS 366 V +T F Y +G F +I + + +GA VEW+ G D + Sbjct: 123 VMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGAXXVEWIWGGFSVDKATLTRFFAFH 182 Query: 367 YLGQPLPFTITTLIWIEVLVIGYIEFQRNAELDPERRLYPGGSYFDPLGLAADPEK 534 ++ LPF I L + +L L+ GS +PLGL +D +K Sbjct: 183 FI---LPFIIAALTMVHLLF-----------------LHETGSN-NPLGLVSDSDK 217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,851,414 Number of Sequences: 219361 Number of extensions: 1088036 Number of successful extensions: 4463 Number of sequences better than 10.0: 106 Number of HSP's better than 10.0 without gapping: 4126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4386 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
