ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdo17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 299 4e-78
2dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 299 4e-78
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
4dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
5dbj|AK111850.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
6gb|AY108178.1| Zea mays PCO103366 mRNA sequence 198 1e-47
7gb|BT017594.1| Zea mays clone EL01N0431A11.c mRNA sequence 149 1e-32
8gb|AY104996.1| Zea mays PCO104926 mRNA sequence 127 4e-26
9gb|AY371290.1| Mesembryanthemum crystallinum ZEITLUPE (ZTL) mRNA... 68 3e-08
10ref|NM_125119.2| Arabidopsis thaliana ZTL (ZEITLUPE); ubiquitin-... 48 0.026
11gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome... 48 0.026
12gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosom... 48 0.026
13gb|BT008772.1| Arabidopsis thaliana At5g57360/MSF19_2 gene, comp... 48 0.026
14gb|AY039902.1| Arabidopsis thaliana AT5g57360/MSF19_2 mRNA, comp... 48 0.026
15gb|AF252294.1|AF252294 Arabidopsis thaliana Adagio 1 (ADO1) mRNA... 48 0.026
16emb|BX832536.1|CNS0A1M1 Arabidopsis thaliana Full-length cDNA Co... 48 0.026
17gb|AF254413.1|AF254413 Arabidopsis thaliana clock-associated PAS... 48 0.026
18gb|AF216525.2|AF216525 Arabidopsis thaliana FKF1-like protein 2 ... 48 0.026
19dbj|AB038796.1| Arabidopsis thaliana LKP1 mRNA for LOV kelch pro... 48 0.026
20dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 48 0.026
21gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, co... 48 0.026
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.10
23gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genom... 46 0.10
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
25gb|AC175742.5| Mus musculus chromosome 7, clone wi1-437K4, compl... 40 6.3
26ref|XM_715638.1| Candida albicans SC5314 hypothetical protein (C... 40 6.3
27gb|AC079155.7| Homo sapiens BAC clone RP11-372J17 from 7, comple... 40 6.3
28emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 o... 40 6.3
29gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, comp... 40 6.3
30dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 6.3
31gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, ... 40 6.3
32emb|AL929552.10| Mouse DNA sequence from clone RP23-207J12 on ch... 40 6.3

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  299 bits (151), Expect = 4e-78
 Identities = 295/343 (86%)
 Strand = Plus / Plus

                                                                           
Query: 4       atcaccggtagcggaatgccaggagcctgcaaccccgctggagttggtccgcctcctcgc 63
               |||||||| || ||||||||||||||| | || || |||||||||||||| || ||||||
Sbjct: 2802677 atcaccggcagtggaatgccaggagccagtaatccagctggagttggtccaccccctcgc 2802736

                                                                           
Query: 64      cttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgta 123
               ||||| ||||| || |||||||| || |||||||||||| ||||||||||||| || || 
Sbjct: 2802737 cttgaccatgtcgctgtgagccttcctggagggagaattttgatatttggtggatcagtg 2802796

                                                                           
Query: 124     gcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacc 183
               ||||||||||| ||||| ||| |||||||||| ||||||||||| |||||||| ||||||
Sbjct: 2802797 gcaggtcttcactccgcttcaaagctttacctgctggatccgactgaagagaagcctacc 2802856

                                                                           
Query: 184     tggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgt 243
               ||||| |||||||| ||||| || ||||||||  | ||||||||||| ||||||||||||
Sbjct: 2802857 tggaggatactgaatgttcctggccgccctccgcgatttgcctggggccacagtacctgt 2802916

                                                                           
Query: 244     gtcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtggacgctg 303
               ||  ||| |||  ||||||| |||||||||||||||||||| |||||||||||||| || 
Sbjct: 2802917 gttgtgggaggtacaaaggcgatagttcttggaggacaaactggagaggagtggacacta 2802976

                                                          
Query: 304     actgaaattcatgaactctctctggcgagctcattagtttgag 346
               |||||| | ||||| || |||||||  ||||| ||||| ||||
Sbjct: 2802977 actgaactgcatgagctttctctggtaagctctttagtctgag 2803019



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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0050G13
          Length = 150685

 Score =  299 bits (151), Expect = 4e-78
 Identities = 295/343 (86%)
 Strand = Plus / Plus

                                                                         
Query: 4     atcaccggtagcggaatgccaggagcctgcaaccccgctggagttggtccgcctcctcgc 63
             |||||||| || ||||||||||||||| | || || |||||||||||||| || ||||||
Sbjct: 70905 atcaccggcagtggaatgccaggagccagtaatccagctggagttggtccaccccctcgc 70964

                                                                         
Query: 64    cttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgta 123
             ||||| ||||| || |||||||| || |||||||||||| ||||||||||||| || || 
Sbjct: 70965 cttgaccatgtcgctgtgagccttcctggagggagaattttgatatttggtggatcagtg 71024

                                                                         
Query: 124   gcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacc 183
             ||||||||||| ||||| ||| |||||||||| ||||||||||| |||||||| ||||||
Sbjct: 71025 gcaggtcttcactccgcttcaaagctttacctgctggatccgactgaagagaagcctacc 71084

                                                                         
Query: 184   tggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgt 243
             ||||| |||||||| ||||| || ||||||||  | ||||||||||| ||||||||||||
Sbjct: 71085 tggaggatactgaatgttcctggccgccctccgcgatttgcctggggccacagtacctgt 71144

                                                                         
Query: 244   gtcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtggacgctg 303
             ||  ||| |||  ||||||| |||||||||||||||||||| |||||||||||||| || 
Sbjct: 71145 gttgtgggaggtacaaaggcgatagttcttggaggacaaactggagaggagtggacacta 71204

                                                        
Query: 304   actgaaattcatgaactctctctggcgagctcattagtttgag 346
             |||||| | ||||| || |||||||  ||||| ||||| ||||
Sbjct: 71205 actgaactgcatgagctttctctggtaagctctttagtctgag 71247



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  218 bits (110), Expect = 1e-53
 Identities = 248/294 (84%)
 Strand = Plus / Minus

                                                                            
Query: 5        tcaccggtagcggaatgccaggagcctgcaaccccgctggagttggtccgcctcctcgcc 64
                |||||||||| |||||||| || ||  | || || || |||| |||||| ||||||||||
Sbjct: 28586705 tcaccggtagtggaatgcctggggcaggaaatccagccggagctggtccacctcctcgcc 28586646

                                                                            
Query: 65       ttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgtag 124
                ||||||||||||| || ||| |||| || |||||| || ||||||||||||| || || |
Sbjct: 28586645 ttgatcatgttgctgtcagcttacctggggggagagttttgatatttggtggatcagtgg 28586586

                                                                            
Query: 125      caggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacct 184
                ||||||||||||| || ||||||||||| ||| ||||||| || ||||| || |||||||
Sbjct: 28586585 caggtcttcattcagcgtcacagctttatctcttggatccaactgaagaaaagcctacct 28586526

                                                                            
Query: 185      ggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgtg 244
                |||| |||||||| ||||| ||||| || ||| ||||||||||||| ||||| |||||||
Sbjct: 28586525 ggaggatactgaatgttcctgggcgacccccacggtttgcctggggccacagcacctgtg 28586466

                                                                      
Query: 245      tcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtgga 298
                |  | | |||| |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 28586465 ttgttggaggaacaaaagcaatagtgcttggaggacaaactggagaagagtgga 28586412



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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score =  218 bits (110), Expect = 1e-53
 Identities = 248/294 (84%)
 Strand = Plus / Minus

                                                                         
Query: 5     tcaccggtagcggaatgccaggagcctgcaaccccgctggagttggtccgcctcctcgcc 64
             |||||||||| |||||||| || ||  | || || || |||| |||||| ||||||||||
Sbjct: 78183 tcaccggtagtggaatgcctggggcaggaaatccagccggagctggtccacctcctcgcc 78124

                                                                         
Query: 65    ttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgtag 124
             ||||||||||||| || ||| |||| || |||||| || ||||||||||||| || || |
Sbjct: 78123 ttgatcatgttgctgtcagcttacctggggggagagttttgatatttggtggatcagtgg 78064

                                                                         
Query: 125   caggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacct 184
             ||||||||||||| || ||||||||||| ||| ||||||| || ||||| || |||||||
Sbjct: 78063 caggtcttcattcagcgtcacagctttatctcttggatccaactgaagaaaagcctacct 78004

                                                                         
Query: 185   ggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgtg 244
             |||| |||||||| ||||| ||||| || ||| ||||||||||||| ||||| |||||||
Sbjct: 78003 ggaggatactgaatgttcctgggcgacccccacggtttgcctggggccacagcacctgtg 77944

                                                                   
Query: 245   tcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtgga 298
             |  | | |||| |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 77943 ttgttggaggaacaaaagcaatagtgcttggaggacaaactggagaagagtgga 77890



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>dbj|AK111850.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149B02, full
            insert sequence
          Length = 2560

 Score =  218 bits (110), Expect = 1e-53
 Identities = 248/294 (84%)
 Strand = Plus / Plus

                                                                        
Query: 5    tcaccggtagcggaatgccaggagcctgcaaccccgctggagttggtccgcctcctcgcc 64
            |||||||||| |||||||| || ||  | || || || |||| |||||| ||||||||||
Sbjct: 1747 tcaccggtagtggaatgcctggggcaggaaatccagccggagctggtccacctcctcgcc 1806

                                                                        
Query: 65   ttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgtag 124
            ||||||||||||| || ||| |||| || |||||| || ||||||||||||| || || |
Sbjct: 1807 ttgatcatgttgctgtcagcttacctggggggagagttttgatatttggtggatcagtgg 1866

                                                                        
Query: 125  caggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacct 184
            ||||||||||||| || ||||||||||| ||| ||||||| || ||||| || |||||||
Sbjct: 1867 caggtcttcattcagcgtcacagctttatctcttggatccaactgaagaaaagcctacct 1926

                                                                        
Query: 185  ggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgtg 244
            |||| |||||||| ||||| ||||| || ||| ||||||||||||| ||||| |||||||
Sbjct: 1927 ggaggatactgaatgttcctgggcgacccccacggtttgcctggggccacagcacctgtg 1986

                                                                  
Query: 245  tcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtgga 298
            |  | | |||| |||| |||||||| |||||||||||||| ||||| |||||||
Sbjct: 1987 ttgttggaggaacaaaagcaatagtgcttggaggacaaactggagaagagtgga 2040



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>gb|AY108178.1| Zea mays PCO103366 mRNA sequence
          Length = 935

 Score =  198 bits (100), Expect = 1e-47
 Identities = 238/284 (83%)
 Strand = Plus / Plus

                                                                       
Query: 58  cctcgccttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggc 117
           |||||||| || ||||||| ||||||||| || || |||||| || ||||||||||||| 
Sbjct: 73  cctcgcctcgaccatgttgtcgtgagccttcctggtgggagagttctgatatttggtggt 132

                                                                       
Query: 118 tctgtagcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaa 177
           ||||| || |||||||| || || ||| | ||||||||||||||||| || ||||| || 
Sbjct: 133 tctgtggcgggtcttcactctgcttcaaaactttacctcctggatccaacggaagataag 192

                                                                       
Query: 178 cctacctggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagt 237
           || ||||||||  | ||||| ||||||||||  |||||| |||| |||||||| ||||||
Sbjct: 193 ccaacctggaggcttctgaatgttccagggcatcctccacggttcgcctggggccacagt 252

                                                                       
Query: 238 acctgtgtcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggagtgg 297
           || |||||  | | |||  |||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 253 acttgtgttgtcggagggacaaaggcaatagttcttggaggacaaactggagaagagtgg 312

                                                       
Query: 298 acgctgactgaaattcatgaactctctctggcgagctcattagt 341
           ||||| |||||||| || || || ||||| || |||||||||||
Sbjct: 313 acgctaactgaaatacacgagctttctctagcaagctcattagt 356



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>gb|BT017594.1| Zea mays clone EL01N0431A11.c mRNA sequence
          Length = 1052

 Score =  149 bits (75), Expect = 1e-32
 Identities = 216/263 (82%)
 Strand = Plus / Minus

                                                                       
Query: 55  cctcctcgccttgatcatgttgccgtgagcctacccggagggagaattatgatatttggt 114
           ||||||||||| ||||||||||| |||||||| || || || |||||| |||||||||| 
Sbjct: 625 cctcctcgcctcgatcatgttgctgtgagcctgccaggcggaagaattttgatatttggc 566

                                                                       
Query: 115 ggctctgtagcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagag 174
           ||||| || ||||||||||| || || ||||||||||| ||  ||||||| || ||||| 
Sbjct: 565 ggctcagtggcaggtcttcactcagcgtcacagctttatctgttggatccaactgaagaa 506

                                                                       
Query: 175 aaacctacctggagaatactgaacgttccagggcgccctccaaggtttgcctggggacac 234
           || || |||||||||||| ||||  |||| || || |||||  | || |||||||| |||
Sbjct: 505 aagccgacctggagaatattgaatattcctggtcgtcctccccgtttcgcctggggccac 446

                                                                       
Query: 235 agtacctgtgtcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggag 294
           || ||||||||  | | |||| ||||||| ||||| ||||| |||||||| ||||| |||
Sbjct: 445 agcacctgtgttgttggaggaacaaaggcgatagtgcttggtggacaaactggagaagag 386

                                  
Query: 295 tggacgctgactgaaattcatga 317
           |||| ||| || ||||| |||||
Sbjct: 385 tggatgcttacagaaatacatga 363



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>gb|AY104996.1| Zea mays PCO104926 mRNA sequence
          Length = 600

 Score =  127 bits (64), Expect = 4e-26
 Identities = 199/244 (81%)
 Strand = Plus / Plus

                                                                       
Query: 55  cctcctcgccttgatcatgttgccgtgagcctacccggagggagaattatgatatttggt 114
           ||||||||||| ||||||||||| |||||||| || || || |||||| |||||||||| 
Sbjct: 300 cctcctcgcctcgatcatgttgctgtgagcctgccaggcggaagaattttgatatttggc 359

                                                                       
Query: 115 ggctctgtagcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagag 174
           ||||| || ||||||||||| || || ||||||||||| ||  ||||||| || ||||| 
Sbjct: 360 ggctcagtggcaggtcttcactcagcgtcacagctttatctgttggatcccactgaagaa 419

                                                                       
Query: 175 aaacctacctggagaatactgaacgttccagggcgccctccaaggtttgcctggggacac 234
           || || |||||||||||| ||||  |||| || || |||||  | || ||||| || |||
Sbjct: 420 aagccgacctggagaatattgaatattcctggtcgtcctccccgtttcgcctgtggccac 479

                                                                       
Query: 235 agtacctgtgtcatggaaggatcaaaggcaatagttcttggaggacaaaccggagaggag 294
           || ||||||||  | | |||| || |||| ||||| ||||| |||||||| ||||| |||
Sbjct: 480 agcacctgtgttgttggaggaacataggcgatagtgcttggtggacaaactggagaagag 539

               
Query: 295 tgga 298
           ||||
Sbjct: 540 tgga 543



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>gb|AY371290.1| Mesembryanthemum crystallinum ZEITLUPE (ZTL) mRNA, complete cds
          Length = 2561

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 145/182 (79%)
 Strand = Plus / Plus

                                                                        
Query: 64   cttgatcatgttgccgtgagcctacccggagggagaattatgatatttggtggctctgta 123
            ||||| |||||||| |||||||| || ||||| |||||  |  | |||||||| ||||| 
Sbjct: 1909 cttgaccatgttgcagtgagcctcccaggaggtagaatcctagtgtttggtggatctgtg 1968

                                                                        
Query: 124  gcaggtcttcattccgcctcacagctttacctcctggatccgaccgaagagaaacctacc 183
            || ||||||||||| || |||||||| || || || || || || || |||||||| || 
Sbjct: 1969 gctggtcttcattcagcttcacagctctatcttcttgacccaactgaggagaaaccaaca 2028

                                                                        
Query: 184  tggagaatactgaacgttccagggcgccctccaaggtttgcctggggacacagtacctgt 243
            ||||||||| | || || || || || |||||||| ||||| ||||| || ||||| |||
Sbjct: 2029 tggagaatattaaatgtacctggtcggcctccaagttttgcttgggggcatagtacttgt 2088

              
Query: 244  gt 245
            ||
Sbjct: 2089 gt 2090



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>ref|NM_125119.2| Arabidopsis thaliana ZTL (ZEITLUPE); ubiquitin-protein ligase
            AT5G57360 (ZTL) mRNA, complete cds
          Length = 2295

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1746 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1805

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1806 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1861



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>gb|AC156020.2| Mus musculus BAC clone RP23-343A9 from chromosome 16, complete
            sequence
          Length = 215559

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 218  ggtttgcctggggacacagtacct 241
            ||||||||||||||||||||||||
Sbjct: 3735 ggtttgcctggggacacagtacct 3712



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>gb|AC138722.3| Mus musculus BAC clone RP23-113B10 from chromosome 16, complete
             sequence
          Length = 227299

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 218   ggtttgcctggggacacagtacct 241
             ||||||||||||||||||||||||
Sbjct: 27675 ggtttgcctggggacacagtacct 27698



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>gb|BT008772.1| Arabidopsis thaliana At5g57360/MSF19_2 gene, complete cds
          Length = 1830

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1576 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1635

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1636 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1691



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>gb|AY039902.1| Arabidopsis thaliana AT5g57360/MSF19_2 mRNA, complete cds
          Length = 2325

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1746 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1805

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1806 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1861



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>gb|AF252294.1|AF252294 Arabidopsis thaliana Adagio 1 (ADO1) mRNA, complete cds
          Length = 2289

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1699 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1758

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1759 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1814



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>emb|BX832536.1|CNS0A1M1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH79ZG10 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2260

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1710 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1769

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1770 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1825



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>gb|AF254413.1|AF254413 Arabidopsis thaliana clock-associated PAS protein ZTL mRNA, complete
            cds
          Length = 2273

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1692 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1751

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1752 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1807



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>gb|AF216525.2|AF216525 Arabidopsis thaliana FKF1-like protein 2 mRNA, complete cds
          Length = 2303

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1715 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1774

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1775 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1830



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>dbj|AB038796.1| Arabidopsis thaliana LKP1 mRNA for LOV kelch protein 1, complete cds
          Length = 2297

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 1710 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 1769

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 1770 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 1825



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>dbj|AB016891.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSF19
          Length = 34508

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 93/116 (80%)
 Strand = Plus / Plus

                                                                        
Query: 91   ggagggagaattatgatatttggtggctctgtagcaggtcttcattccgcctcacagctt 150
            ||||| |||||  |||||||||| ||||| || ||||| ||||| || || || ||||||
Sbjct: 9451 ggaggcagaatcttgatatttggcggctcagtggcagggcttcactcagcgtctcagctt 9510

                                                                    
Query: 151  tacctcctggatccgaccgaagagaaacctacctggagaatactgaacgttccagg 206
            || || || || || || || || ||||| || ||||||||||| ||| |||||||
Sbjct: 9511 tatctacttgacccaacggaggacaaaccgacttggagaatactaaacattccagg 9566



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>gb|AC131979.10| Mus musculus chromosome 16, clone RP24-156L5, complete sequence
          Length = 156267

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 218   ggtttgcctggggacacagtacct 241
             ||||||||||||||||||||||||
Sbjct: 18433 ggtttgcctggggacacagtacct 18410



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 146      agctttacctcctggatccgaccgaagagaaacct 180
                |||||||||| ||||||||||| ||| ||||||||
Sbjct: 15642771 agctttacctgctggatccgactgaacagaaacct 15642737



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>gb|AC097279.5| Oryza sativa chromosome 3 BAC OSJNBa0093I13 genomic sequence, complete
             sequence
          Length = 178748

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 146   agctttacctcctggatccgaccgaagagaaacct 180
             |||||||||| ||||||||||| ||| ||||||||
Sbjct: 52725 agctttacctgctggatccgactgaacagaaacct 52691



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 146      agctttacctcctggatccgaccgaagagaaacct 180
                |||||||||| ||||||||||| ||| ||||||||
Sbjct: 15637305 agctttacctgctggatccgactgaacagaaacct 15637271



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>gb|AC175742.5| Mus musculus chromosome 7, clone wi1-437K4, complete sequence
          Length = 38181

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    atgccaggagcctgcaaccc 38
             ||||||||||||||||||||
Sbjct: 16760 atgccaggagcctgcaaccc 16779



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>ref|XM_715638.1| Candida albicans SC5314 hypothetical protein (CaO19_11771), mRNA
          Length = 3054

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 250 gaaggatcaaaggcaatagttctt 273
           |||||||||||||||||| |||||
Sbjct: 545 gaaggatcaaaggcaatacttctt 522



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>gb|AC079155.7| Homo sapiens BAC clone RP11-372J17 from 7, complete sequence
          Length = 125372

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    gagctcattagtttgagacc 349
              ||||||||||||||||||||
Sbjct: 100803 gagctcattagtttgagacc 100784



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>emb|Z84485.1|HS524E15 Human DNA sequence from clone RP3-524E15 on chromosome 6p21 Contains
             the BRPF3 gene for bromodomain and PHD finger containing
             protein 3 and a CpG Island, complete sequence
          Length = 80908

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 302   tgactgaaattcatgaactc 321
             ||||||||||||||||||||
Sbjct: 11243 tgactgaaattcatgaactc 11224



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>gb|AC068898.8| Homo sapiens chromosome 10 clone RP11-534L6, complete sequence
          Length = 176188

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   gagctcattagtttgagacc 349
             ||||||||||||||||||||
Sbjct: 73248 gagctcattagtttgagacc 73267



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>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 442     gtagatgaaagctggctact 461
               ||||||||||||||||||||
Sbjct: 1379787 gtagatgaaagctggctact 1379806



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>gb|AC089995.1|AC089995 Caenorhabditis briggsae cosmid CB035H18, complete sequence
          Length = 79459

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 300  gctgactgaaattcatgaactctctctg 327
            ||||| |||||||||||||||| |||||
Sbjct: 6003 gctgaatgaaattcatgaactcactctg 6030



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>emb|AL929552.10| Mouse DNA sequence from clone RP23-207J12 on chromosome 11, complete
            sequence
          Length = 84590

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 441  agtagatgaaagctggctac 460
            ||||||||||||||||||||
Sbjct: 7158 agtagatgaaagctggctac 7177


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,597,146
Number of Sequences: 3902068
Number of extensions: 3597146
Number of successful extensions: 54711
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 54591
Number of HSP's gapped (non-prelim): 123
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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