Clone Name | basdo16 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EDN3_MOUSE (P48299) Endothelin-3 precursor (ET-3) (Preproendothe... | 32 | 0.59 | 2 | COBL7_ARATH (Q8GZ17) COBRA-like protein 7 precursor | 30 | 3.8 | 3 | MOT6_HUMAN (O15375) Monocarboxylate transporter 6 (MCT 6) (MCT 5) | 29 | 5.0 | 4 | IVBI_TROCA (Q6ITB0) Carinatin precursor | 28 | 8.6 | 5 | IVBI_PSEPO (Q6ITB1) Blackelin precursor | 28 | 8.6 |
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>EDN3_MOUSE (P48299) Endothelin-3 precursor (ET-3) (Preproendothelin-3) (PPET3)| Length = 214 Score = 32.3 bits (72), Expect = 0.59 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 216 LFNCQRRGDAGRQSPEQGPAQEGASQICSACWARMGLTVVTYT 344 L C + GD+GR S QGP + G+ + C A G +V+ T Sbjct: 19 LVPCPQSGDSGRASVSQGPPEAGSERGCEETVAGPGERIVSPT 61
>COBL7_ARATH (Q8GZ17) COBRA-like protein 7 precursor| Length = 661 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/44 (45%), Positives = 25/44 (56%) Frame = -3 Query: 206 RWLLCGVLIVSYVRPLQQSISSLNTSPYCSNPSPSSKAPICNAV 75 R LL +LIVS PL S S NT+ +PSP S + +CN V Sbjct: 10 RLLLLSLLIVSI--PLTSSQSDANTTN--PSPSPPSDSDLCNGV 49
>MOT6_HUMAN (O15375) Monocarboxylate transporter 6 (MCT 6) (MCT 5)| Length = 505 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 6/66 (9%) Frame = -3 Query: 197 LCGVLIVSYVRPLQQSISSLNTSPYCSNPSPSSKAPICNAVCG------LSFFFFFLKNG 36 +CG +I RP+ S++ + C P P + A C A CG L+F G Sbjct: 184 ICGAII----RPVATSVAP--ETKECPPPPPETPALGCLAACGRTIQRHLAFDILRHNTG 237 Query: 35 YCLILL 18 YC+ +L Sbjct: 238 YCVYIL 243
>IVBI_TROCA (Q6ITB0) Carinatin precursor| Length = 83 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = -1 Query: 322 PILAQQAEQICEAPSWAGPCSGL--CLPASPRR*QLNKRQLGGCYVAFSLSRTYARC 158 P+ ++ CE P GPC G+ +P + Q + GGCY + +T C Sbjct: 21 PVSSKDRPDFCELPDDRGPCRGIFHAFYYNPDQRQCLEFIYGGCYGNANNFKTIDEC 77
>IVBI_PSEPO (Q6ITB1) Blackelin precursor| Length = 83 Score = 28.5 bits (62), Expect = 8.6 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 2/57 (3%) Frame = -1 Query: 322 PILAQQAEQICEAPSWAGPCSGL--CLPASPRR*QLNKRQLGGCYVAFSLSRTYARC 158 P+ ++ CE P GPC G+ +P + Q + GGCY + +T C Sbjct: 21 PVSSKDRPDFCELPDDRGPCRGIFHAFYYNPDQRQCLEFIYGGCYGNANNFKTIDEC 77 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,948,302 Number of Sequences: 219361 Number of extensions: 982836 Number of successful extensions: 2864 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2788 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2864 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)