Clone Name | basdo15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | SOS_DROME (P26675) Protein son of sevenless | 31 | 2.5 | 2 | ATM_HUMAN (Q13315) Serine-protein kinase ATM (EC 2.7.11.1) (Atax... | 30 | 4.2 | 3 | ARLY_ANASP (Q8YQE6) Argininosuccinate lyase (EC 4.3.2.1) (Argino... | 30 | 5.5 | 4 | NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exch... | 29 | 7.2 |
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>SOS_DROME (P26675) Protein son of sevenless| Length = 1596 Score = 30.8 bits (68), Expect = 2.5 Identities = 19/51 (37%), Positives = 23/51 (45%) Frame = +1 Query: 268 LEKARQSETIKFSLYKNXXXXXXXXXEWKSKRKGVGIPLDESLKKMQHRGN 420 LE ARQ ++F +YKN W K K V P LK M+H N Sbjct: 831 LELARQLTLLEFEMYKNVKPSELVGSPWTKKDKEVKSP--NLLKIMKHTTN 879
>ATM_HUMAN (Q13315) Serine-protein kinase ATM (EC 2.7.11.1) (Ataxia| telangiectasia mutated) (A-T, mutated) Length = 3056 Score = 30.0 bits (66), Expect = 4.2 Identities = 9/22 (40%), Positives = 18/22 (81%) Frame = +1 Query: 346 EWKSKRKGVGIPLDESLKKMQH 411 +WK++RKG+ IP D+ + K+++ Sbjct: 2637 QWKTQRKGINIPADQPITKLKN 2658
>ARLY_ANASP (Q8YQE6) Argininosuccinate lyase (EC 4.3.2.1) (Arginosuccinase)| (ASAL) Length = 461 Score = 29.6 bits (65), Expect = 5.5 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = -3 Query: 490 ELLSFPR*NKNLFCSNKSA*FSLCFLCAASSLKIHPME-SQLPFFWISILFRYGVCRSN 317 ELL F R +N F++ FLCAAS + +H S+ W S FR+ + + + Sbjct: 216 ELLQFERIYENSLDGVSDRDFAIEFLCAASLIMVHLSRLSEEIILWASEEFRFVILKDS 274
>NHX4_ARATH (Q8S397) Sodium/hydrogen exchanger 4 (Na(+)/H(+) exchanger 4)| (NHE-4) Length = 529 Score = 29.3 bits (64), Expect = 7.2 Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -1 Query: 477 FLGETRIF-FVQTKALSLAFVSSVLHLL*RFIQWNPNSLSFGFPFYLDMVYVDLILI*RK 301 F+ ET IF +V T AL F +W +SLSFG + V L+L+ R Sbjct: 308 FIAETFIFLYVGTDALD-------------FTKWKTSSLSFGGTLGVSGVITALVLLGRA 354 Query: 300 LYRFTLS 280 + F LS Sbjct: 355 AFVFPLS 361 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,245,878 Number of Sequences: 219361 Number of extensions: 717879 Number of successful extensions: 1355 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 1344 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1355 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)