ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdo07 |
|---|---|
| Clone Library Name | barley_pub |
>YHG9_YEAST (P38758) Uncharacterized protein YHR009C| Length = 523 Score = 78.6 bits (192), Expect = 2e-14 Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 5/139 (3%) Frame = +1 Query: 88 KMLDPEVYPRPTGEVYICGMSKD-EQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEG 264 + PE+Y R EVY+CG +P+ + + L+ ++S L Sbjct: 386 EFFSPEMYARKD-EVYVCGEGDTLVNIPESSDDVEVVSEKCDELYHYVSKLSPTLSK--- 441 Query: 265 AEVVAEQACYLPC----TDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELIL 432 ++ +QAC+LP T G P+IGE VK Y+A+GHSCWGI NAP TG +AE++L Sbjct: 442 GHLLRKQACFLPVLNVPTSSG-PLIGET-NVKDLYIASGHSCWGINNAPATGKLMAEILL 499 Query: 433 DGQAKIVDLAPFSPARFLN 489 DG+A +++ P + + Sbjct: 500 DGEATSAEISSLDPKLYFD 518
>YAM3_SCHPO (Q10058) Hypothetical protein C1F5.03c in chromosome I| Length = 382 Score = 74.3 bits (181), Expect = 3e-13 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 1/126 (0%) Frame = +1 Query: 100 PEVYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGAEVVA 279 PE Y R E+Y+CG DE +P+ + + D A++ + A ++ + V Sbjct: 258 PEFYARED-ELYVCGEFDDEPLPELSSDTKVDQDKCALIKQCANHFHQIIRD---SPVKV 313 Query: 280 EQACYLPCTD-DGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVD 456 QACYLP ++ G PVIG++ YVA H CWGI P TG L+ELILDG + Sbjct: 314 RQACYLPISNATGAPVIGKIGS--SIYVAAAHGCWGITLGPGTGKVLSELILDGAVTSAN 371 Query: 457 LAPFSP 474 + P Sbjct: 372 IDLLDP 377
>YURR_BACSU (O32159) Hypothetical oxidoreductase yurR (EC 1.-.-.-)| Length = 372 Score = 53.1 bits (126), Expect = 7e-07 Identities = 29/87 (33%), Positives = 45/87 (51%) Frame = +1 Query: 217 HKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNA 396 H++ + + A V + + P T LPV+G +P V+G Y A G G+ Sbjct: 283 HEVLSKALAVAPGLADAAAVETRVGFRPFTPGFLPVVGAVPNVQGLYAANGLGASGLTMG 342 Query: 397 PVTGAALAELILDGQAKIVDLAPFSPA 477 P GA LA+L+L Q ++ DL+P+ PA Sbjct: 343 PFLGAELAKLVLGKQTEL-DLSPYDPA 368
>Y4548_PSEAE (P33642) Probable D-amino acid oxidase PA4548| Length = 364 Score = 50.4 bits (119), Expect = 5e-06 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = +1 Query: 274 VAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIV 453 VA A P + +G+P IG +PG G ++ TGH G++ AP + LA+L + G+ I+ Sbjct: 295 VAHWAGLRPGSPEGIPYIGPVPGFDGLWLNTGHYRNGLVLAPASCRLLADL-MSGREPII 353 Query: 454 DLAPFSPA 477 D AP++PA Sbjct: 354 DPAPYAPA 361
>GLOX_BACSU (O31616) Glycine oxidase (EC 1.4.3.19)| Length = 369 Score = 42.4 bits (98), Expect = 0.001 Identities = 32/110 (29%), Positives = 48/110 (43%) Frame = +1 Query: 106 VYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEGAEVVAEQ 285 + PR +G + + K P + PD + L + + + L + +V Sbjct: 247 IVPRKSGRLVVGATMK-------PGDWSETPD-LGGLESVMKKAKTMLPAIQNMKVDRFW 298 Query: 286 ACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 435 A P T DG P IG P A GH GIL AP TGA +++LI++ Sbjct: 299 AGLRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 348
>THIG_SYNY3 (Q55710) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 656 Score = 39.7 bits (91), Expect = 0.008 Identities = 26/65 (40%), Positives = 36/65 (55%) Frame = +1 Query: 292 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFS 471 + P T D P +G P +A GH GIL AP+T A +++LILD + + + FS Sbjct: 297 FRPGTPDEQPFLGYGP-CDNLILAIGHYRNGILLAPITAALISDLILDQKVSPL-IHAFS 354 Query: 472 PARFL 486 P RFL Sbjct: 355 PQRFL 359
>M2GD_MOUSE (Q9DBT9) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 869 Score = 37.0 bits (84), Expect = 0.054 Identities = 28/79 (35%), Positives = 40/79 (50%) Frame = +1 Query: 247 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 426 LK + VV Y P D LP++G GV+ +VATG +GI++A G L++ Sbjct: 352 LKKADIINVVNGPITYSP---DILPMVGPHQGVRNYWVATGFG-YGIIHAGGVGKFLSDW 407 Query: 427 ILDGQAKIVDLAPFSPARF 483 IL G+ DL P R+ Sbjct: 408 ILHGEPPF-DLIELDPNRY 425
>THIG_ANASP (Q8YRC9) Bifunctional goxB/thiG protein [Includes: Glycine oxidase| (EC 1.5.3.-); Thiazole biosynthesis protein thiG] Length = 652 Score = 37.0 bits (84), Expect = 0.054 Identities = 20/48 (41%), Positives = 29/48 (60%) Frame = +1 Query: 292 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILD 435 + P T D LP++G +ATGH GIL AP+T A +A+LI++ Sbjct: 300 FRPATPDELPILGTSH-CPNLTLATGHYRNGILLAPITAALIADLIVE 346
>DADA1_RALSO (Q8Y0W7) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 429 Score = 36.6 bits (83), Expect = 0.071 Identities = 21/63 (33%), Positives = 34/63 (53%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG P++G P V+G ++ TGH G A +G L++L+ G++ + S Sbjct: 356 PMTPDGTPIVGPTP-VRGLWINTGHGTLGWTMACGSGQLLSDLV-SGRSPAIRADDLSVY 413 Query: 478 RFL 486 R+L Sbjct: 414 RYL 416
>Y3456_PSEAE (Q9HYF0) UPF0209 protein PA3456| Length = 654 Score = 36.2 bits (82), Expect = 0.092 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 26/130 (20%) Frame = +1 Query: 118 PTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEE-GAEVVAEQACY 294 P G+ + G S D + D T+A ++ +L +I+ + +L ++ E + +A + Sbjct: 494 PRGDEHTLGASFDFKSEDLAPTLAEHQGNLELLREISPDLLQRLGADDLPLERLEGRAAF 553 Query: 295 LPCTDDGLPVIGEM-------------------------PGVKGCYVATGHSCWGILNAP 399 + D LP++G + P + G Y+ +GH G+++AP Sbjct: 554 RCTSPDYLPLVGPLAERAAFDEAYAVLARDARQVPERACPWLPGLYLNSGHGSRGLISAP 613 Query: 400 VTGAALAELI 429 ++G LA I Sbjct: 614 LSGELLAAWI 623
>DADA_YERPE (Q8ZEL7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 434 Score = 36.2 bits (82), Expect = 0.092 Identities = 20/52 (38%), Positives = 28/52 (53%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIV 453 P T DG P++G P +K Y+ TGH G A +G LA++I + IV Sbjct: 356 PMTPDGTPIVGRTP-LKNLYLNTGHGTLGWTMACGSGQLLADIIQGRRPAIV 406
>MTOX_SALTY (P58525) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.092 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +1 Query: 301 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 468 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 469 SPARF 483 +RF Sbjct: 366 RLSRF 370
>MTOX_SALTI (P58524) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 36.2 bits (82), Expect = 0.092 Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 4/65 (6%) Frame = +1 Query: 301 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 468 CT D P +I +PG + V TG S G APV G A+ L G+ DL PF Sbjct: 307 CTYDNSPDEDFIIDTLPGHENTLVITGLSGHGFKFAPVLGEIAADFAL-GKTPSFDLTPF 365 Query: 469 SPARF 483 +RF Sbjct: 366 RLSRF 370
>DADA2_RALSO (Q8XX54) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 425 Score = 36.2 bits (82), Expect = 0.092 Identities = 25/78 (32%), Positives = 37/78 (47%) Frame = +1 Query: 247 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 426 L+ + A A P T G+PV+G P V G ++ GH G A + LA+L Sbjct: 350 LRASDAGADAAPWAGMRPATPTGVPVVGPSP-VDGLWLNVGHGALGFTLAMGSAGLLADL 408 Query: 427 ILDGQAKIVDLAPFSPAR 480 I +A + AP++ AR Sbjct: 409 IA-RRAPAIAAAPYALAR 425
>DADA_XANCP (Q8P4Q9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 35.8 bits (81), Expect = 0.12 Identities = 22/69 (31%), Positives = 34/69 (49%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 478 RFLNNKKSR 504 R+L+ + +R Sbjct: 415 RYLSTRSTR 423
>Y1751_PSEPK (Q88M24) UPF0209 protein PP1751| Length = 654 Score = 35.4 bits (80), Expect = 0.16 Identities = 32/131 (24%), Positives = 56/131 (42%), Gaps = 26/131 (19%) Frame = +1 Query: 106 VYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEE-GAEVVAE 282 V P GE + G S D D T+A ++A+L +I+ ++ +L E E + Sbjct: 493 VAPPREGE-HTLGASFDFHSEDLAPTVAEHQGNLALLDEISVDLAQRLAVAELDPEQLQG 551 Query: 283 QACYLPCTDDGLPVIGEM-------------------------PGVKGCYVATGHSCWGI 387 +A + + D LP++G + P + G YV +GH G+ Sbjct: 552 RAAFRCTSPDYLPIVGPIADAQAFAEAYAVLGRDARQVPDVPCPWLGGLYVNSGHGSRGL 611 Query: 388 LNAPVTGAALA 420 + AP++G +A Sbjct: 612 ITAPLSGELVA 622
>OOXB1_RHIME (Q92XP5) Opine oxidase subunit B (EC 1.-.-.-) (Octopine oxidase| subunit B) Length = 368 Score = 35.0 bits (79), Expect = 0.21 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Frame = +1 Query: 199 DSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHS- 375 ++IA L +I RV L+ A ++ + DGLP+ E P + G YV T HS Sbjct: 278 ETIARLCRIGTRVFPALRA---ARLIRAWGALRIMSPDGLPIYEEAPEMPGAYVVTCHSG 334 Query: 376 -CWGILNAPVTGAALAE 423 L+A G ALAE Sbjct: 335 VTLASLHALELGPALAE 351
>M2GD_HUMAN (Q9UI17) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 866 Score = 35.0 bits (79), Expect = 0.21 Identities = 29/88 (32%), Positives = 42/88 (47%) Frame = +1 Query: 220 KIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAP 399 K A + LK + VV Y P D LP++G GV+ +VA G +GI++A Sbjct: 350 KAAMEMVPVLKKADIINVVNGPITYSP---DILPMVGPHQGVRNYWVAIGFG-YGIIHAG 405 Query: 400 VTGAALAELILDGQAKIVDLAPFSPARF 483 G L++ IL G+ DL P R+ Sbjct: 406 GVGKYLSDWILHGEPPF-DLIELDPNRY 432
>DADA_XYLFT (Q87AK0) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.27 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 429 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>DADA_XYLFA (Q9PF27) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 435 Score = 34.7 bits (78), Expect = 0.27 Identities = 19/44 (43%), Positives = 25/44 (56%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 429 P T DG PVIG P +G ++ TGH G + +G LA+LI Sbjct: 357 PATPDGTPVIGATP-YQGLFLNTGHGTLGWTMSSGSGRYLADLI 399
>M2GD_RAT (Q63342) Dimethylglycine dehydrogenase, mitochondrial precursor (EC| 1.5.99.2) (ME2GLYDH) Length = 857 Score = 34.3 bits (77), Expect = 0.35 Identities = 26/79 (32%), Positives = 39/79 (49%) Frame = +1 Query: 247 LKTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAEL 426 LK + +V Y P D LP++G GV+ +VA G +GI++A G L++ Sbjct: 352 LKKADIINIVNGPITYSP---DILPMVGPHQGVRNYWVAIGFG-YGIIHAGGVGKYLSDW 407 Query: 427 ILDGQAKIVDLAPFSPARF 483 IL G+ DL P R+ Sbjct: 408 ILHGEPPF-DLIELDPNRY 425
>DADA_XANAC (Q8PGC9) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 429 Score = 33.9 bits (76), Expect = 0.46 Identities = 22/69 (31%), Positives = 33/69 (47%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G P ++ TGH G A +G LA+L + G+ +D Sbjct: 357 PATPDGTPVVGATP-YANLFLNTGHGTLGWTMACGSGRYLADL-MQGRTPEIDTEGLDVF 414 Query: 478 RFLNNKKSR 504 R+L+ + R Sbjct: 415 RYLSPRSVR 423
>DADA_PSESM (Q88BB6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 433 Score = 33.1 bits (74), Expect = 0.78 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 429 P T DG P++G P ++ ++ TGH G A +G LA+LI Sbjct: 357 PTTPDGTPIVGATP-LRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>ZC3H6_MOUSE (Q8BYK8) Zinc finger CCCH-type domain-containing protein 6| Length = 1177 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = -2 Query: 440 CPSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSP 312 CP RM S+ ++P G+ ++PQ C HP +PG P G P Sbjct: 466 CPQRMYSSESSPGPGS-KVPQG-CESPVRHPGSPGHHPCVGPP 506
>DADA_VIBCH (Q9KTV1) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 421 Score = 32.7 bits (73), Expect = 1.0 Identities = 17/53 (32%), Positives = 27/53 (50%) Frame = +1 Query: 292 YLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 450 + P T DG P+IG P Y TGH G A + + LA+++ G++ + Sbjct: 356 FRPMTPDGTPIIGATP-YTNLYTNTGHGTLGWTMACGSASILADVLTHGESPL 407
>Y1942_CHRVO (Q7NWN9) UPF0209 protein CV_1942| Length = 660 Score = 32.3 bits (72), Expect = 1.3 Identities = 36/141 (25%), Positives = 58/141 (41%), Gaps = 28/141 (19%) Frame = +1 Query: 169 DDPATIAGE-PDSIAMLHKIAGRVSSQLKTEEGAEVVAEQACYLPCTDDGLPVIGEM--- 336 DD GE +++AML ++A + + L + E + +A + + D LP++G Sbjct: 514 DDLGVNDGEHAENLAMLAELAPSLRASLD-RDAPEHLDGRAAFRCTSPDYLPLVGPAVAA 572 Query: 337 ----------------------PGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 450 P +G YV H G++ AP++G LA L+ A + Sbjct: 573 RDFVHAYRELARDATLRPATACPWAEGLYVNAAHGSRGLITAPLSGEILASLLEGEPAPL 632 Query: 451 -VDL-APFSPARFLNNKKSRR 507 DL P+RFL RR Sbjct: 633 PADLMRAVHPSRFLLRDLIRR 653
>Y1639_PSESM (Q886E0) UPF0209 protein PSPTO1639| Length = 660 Score = 32.3 bits (72), Expect = 1.3 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 26/131 (19%) Frame = +1 Query: 106 VYPRPTGEVYICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKT-EEGAEVVAE 282 V P GE + G S D D +A ++ +L +I+ ++S+L+ + E + Sbjct: 497 VAPARLGE-HTLGASFDFNSVDLTPNVADHLGNLTLLQEISADLASRLEAADRPPEQLRG 555 Query: 283 QACYLPCTDDGLPVIGEM-------------------------PGVKGCYVATGHSCWGI 387 +A + + D LP++G + P + G YV +GH G+ Sbjct: 556 RAAFRCTSPDYLPIVGPLADREAFVQAYAALGKDARQVPDIACPWLDGLYVNSGHGSRGL 615 Query: 388 LNAPVTGAALA 420 + AP+ +A Sbjct: 616 ITAPLCAELIA 626
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 32.0 bits (71), Expect = 1.7 Identities = 36/122 (29%), Positives = 55/122 (45%) Frame = -2 Query: 437 PSRMSSASAAPVTGALRIPQQLCPVAT*HPFTPGISPMTGSPSSVHGR*QACSATTSAPS 258 P M+ S +PV+ P P + P +P +PMT P+ + + S++T PS Sbjct: 200 PGSMAPKSGSPVSPTTSPP---APPKSTSPVSPSSAPMTSPPAPMAPK----SSSTIPPS 252 Query: 257 SVLSWLDTLPAIL*SIAMESGSPAIVAGSSGTCSSLLIPQMYTSPVGRG*TSGSSILAPG 78 S + + + P S+A +S SP +S T S L P TS SGS++ G Sbjct: 253 S--APMTSPPG---SMAPKSSSP---VSNSPTVSPSLAPGGSTSSSPSDSPSGSAMGPSG 304 Query: 77 SG 72 G Sbjct: 305 DG 306
>DADA_RHILV (Q9RAE6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 416 Score = 31.6 bits (70), Expect = 2.3 Identities = 18/51 (35%), Positives = 26/51 (50%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI 450 P T DG PVIG V G ++ TGH G + + + +L+ GQ +I Sbjct: 356 PMTPDGTPVIGPTK-VAGLFLNTGHGTLGWTMSTGSARLIGDLVGGGQPEI 405
>DADA_SHIFL (Q7UCT6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGS-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>DADA_ECOLI (P0A6J5) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>DADA_ECOL6 (P0A6J6) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>DADA_ECO57 (P0A6J7) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.6 bits (70), Expect = 2.3 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++L L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRFKNLWLNTGHGTLGWTMACGSGQLLSDL-LSGRTPAIPYEDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>MTOX_ECO57 (P58523) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 31.6 bits (70), Expect = 2.3 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +1 Query: 301 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 468 CT D P +I +PG + TG S G A V G A+ D ++ DL PF Sbjct: 308 CTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDF-DLTPF 366 Query: 469 SPARF 483 S +RF Sbjct: 367 SLSRF 371
>IGA1_STRR6 (Q59947) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1| protease) (IgA-specific zinc metalloproteinase) Length = 1963 Score = 31.2 bits (69), Expect = 3.0 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Frame = +1 Query: 70 QPE-PGAKMLD---PEVYPRPTGEVYICGMSKDEQVPDDPATIA---GEPDSIAMLHKIA 228 QPE P A + D PEV P E + + E P+ P T+ GEP+ +A L + Sbjct: 421 QPELPEAVVSDKGEPEVQPT-LPEAVVTDKGETEVQPESPDTVVSDKGEPEQVAPLPEYK 479 Query: 229 GRVSSQLKTEEGAEVVAEQ 285 G + Q+K E E EQ Sbjct: 480 GNI-EQVKPETPVEKTKEQ 497
>IGA1A_STRPN (Q97QP7) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1| protease) (IgA-specific zinc metalloproteinase) Length = 2004 Score = 31.2 bits (69), Expect = 3.0 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 7/79 (8%) Frame = +1 Query: 70 QPE-PGAKMLD---PEVYPRPTGEVYICGMSKDEQVPDDPATIA---GEPDSIAMLHKIA 228 QPE P A + D PEV P E + + E P+ P T+ GEP+ +A L + Sbjct: 421 QPELPEAVVSDKGEPEVQPT-LPEAVVTDKGETEVQPESPDTVVSDKGEPEQVAPLPEYK 479 Query: 229 GRVSSQLKTEEGAEVVAEQ 285 G + Q+K E E EQ Sbjct: 480 GNI-EQVKPETPVEKTKEQ 497
>Y4SL_RHISN (P55655) Hypothetical protein y4sL| Length = 203 Score = 31.2 bits (69), Expect = 3.0 Identities = 18/62 (29%), Positives = 31/62 (50%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PVIG + G ++ TGH G + + +A+L+ G+ +D + + Sbjct: 143 PMTPDGTPVIGPTK-IAGLFLNTGHGTLGWTMSSGSARVIADLV-SGRKPEIDATDLAVS 200 Query: 478 RF 483 R+ Sbjct: 201 RY 202
>DADA_SALTY (Q8ZP17) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 3.0 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++ IL G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSD-ILSGRTPAIPYDDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>DADA_SALTI (Q8Z687) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 31.2 bits (69), Expect = 3.0 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G L++++L G+ + S A Sbjct: 356 PMTPDGTPVVGR-TRYKNLWLNTGHGTLGWTMACGSGQLLSDILL-GRTPAIPYDDLSVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>SOX_RABIT (P79371) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.8 bits (68), Expect = 3.9 Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 7/133 (5%) Frame = +1 Query: 106 VYPRPTGEV-------YICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEG 264 +Y PTGE Y G D + D P T + + +L LK E Sbjct: 256 IYGLPTGEYPGLMKVSYHHGNHADPEERDCP-TARTDIGDVQILSSFVRDHLPDLKPEPA 314 Query: 265 AEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQA 444 ++C T D ++ P + G S G APV G L EL + Sbjct: 315 VI----ESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMK-LT 369 Query: 445 KIVDLAPFSPARF 483 DLAPF +RF Sbjct: 370 PSYDLAPFRISRF 382
>SOX_HUMAN (Q9P0Z9) Peroxisomal sarcosine oxidase (EC 1.5.3.1) (PSO)| (L-pipecolate oxidase) (EC 1.5.3.7) (L-pipecolic acid oxidase) Length = 390 Score = 30.8 bits (68), Expect = 3.9 Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 7/133 (5%) Frame = +1 Query: 106 VYPRPTGEV-------YICGMSKDEQVPDDPATIAGEPDSIAMLHKIAGRVSSQLKTEEG 264 +Y PTGE Y G D + D P T + + +L LK E Sbjct: 256 IYGLPTGEYPGLMKVSYHHGNHADPEERDCP-TARTDIGDVQILSSFVRDHLPDLKPEPA 314 Query: 265 AEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQA 444 ++C T D ++ P + G S G APV G L EL + Sbjct: 315 VI----ESCMYTNTPDEQFILDRHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMK-LT 369 Query: 445 KIVDLAPFSPARF 483 DLAPF +RF Sbjct: 370 PSYDLAPFRISRF 382
>KP58_DROME (Q9VPC0) Serine/threonine-protein kinase PITSLRE (EC 2.7.11.22)| (Cell division cycle 2-like) Length = 952 Score = 30.8 bits (68), Expect = 3.9 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 250 KTEEGAEVVAEQACYLPCTDDGLPVIGEMPGVKGCYVATGHSC 378 K +E + + EQ +PC D G+P+ PGV+GC C Sbjct: 521 KLKEKQKSLEEQ---IPCDDKGIPLPNYYPGVQGCRSVEEFQC 560
>DADA1_PSEPK (Q88EM0) D-amino acid dehydrogenase 1 small subunit (EC 1.4.99.1)| Length = 432 Score = 30.8 bits (68), Expect = 3.9 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 4/69 (5%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKI----VDLAP 465 P T DG P++G+ + ++ TGH G + +G LA+L+ + KI +D++ Sbjct: 357 PATPDGTPIVGKTK-YRNLFLNTGHGTLGWTMSCGSGRLLADLMAGKKPKISAKGLDISR 415 Query: 466 FSPARFLNN 492 +S + +N Sbjct: 416 YSNQKEAHN 424
>DADA2_PSEPK (Q88CB1) D-amino acid dehydrogenase 2 small subunit (EC 1.4.99.1)| Length = 434 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELI 429 P T DG P++G + ++ TGH G A +G LA+LI Sbjct: 357 PATPDGTPIVG-ATAFRNLFLNTGHGTLGWTMACGSGRLLADLI 399
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 30.0 bits (66), Expect = 6.6 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +3 Query: 9 RVLRPRNPDKXNTALPVPELPAGARRQDARPG-GLPAPHGG 128 R RP + A P P G R+ D+RPG G PAP G Sbjct: 275 RAERPDRGPRPAGARPAGPRPGGPRQGDSRPGDGRPAPRSG 315
>GP153_MOUSE (Q8K0Z9) Probable G-protein coupled receptor 153 (G-protein coupled| receptor PGR1) Length = 631 Score = 30.0 bits (66), Expect = 6.6 Identities = 15/40 (37%), Positives = 20/40 (50%) Frame = +3 Query: 51 LPVPELPAGARRQDARPGGLPAPHGGGVHLRNEQGRASSR 170 +P P P A R A P +P P GG + QGR ++R Sbjct: 541 VPAPAQPFPAARDSAEPAEVPTPPGG--RTQRSQGRRAAR 578
>DADA_KLEAE (O30745) D-amino acid dehydrogenase small subunit (EC 1.4.99.1)| Length = 432 Score = 30.0 bits (66), Expect = 6.6 Identities = 19/62 (30%), Positives = 30/62 (48%) Frame = +1 Query: 298 PCTDDGLPVIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPFSPA 477 P T DG PV+G K ++ TGH G A +G +++LI G+ + + A Sbjct: 356 PMTPDGTPVVGR-TAYKNLWLNTGHGTLGWTMACGSGQLISDLI-SGRTPAIPYDDLAVA 413 Query: 478 RF 483 R+ Sbjct: 414 RY 415
>MTOX_SHIFL (Q83RT9) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 30.0 bits (66), Expect = 6.6 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 4/65 (6%) Frame = +1 Query: 301 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 468 CT D P +I +PG + TG S G A V G A+ D Q DL PF Sbjct: 308 CTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQD-QKSDFDLTPF 366 Query: 469 SPARF 483 +RF Sbjct: 367 RLSRF 371
>RP1_MOUSE (P56716) Oxygen-regulated protein 1 (Retinitis pigmentosa RP1 protein| homolog) Length = 2095 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 5/62 (8%) Frame = -1 Query: 336 HFPNDRQPVIGAREV----AGLFRDYLCALLCLELAGHPPSNLMKHCNGV-RLPGNRCRI 172 +F RQ + A +V + +DYL ALL L P+N KH NG+ ++PG+ + Sbjct: 1042 NFATKRQSIEVAIQVDTMGENVLKDYLPALLLRHLEAFVPNN-QKHQNGISQIPGSLAEV 1100 Query: 171 IW 166 ++ Sbjct: 1101 VF 1102
>UHRF2_MOUSE (Q7TMI3) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95-like ring finger protein) (Nuclear zinc finger protein Np97) (NIRF) Length = 803 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = +3 Query: 54 PVPELPAGAR---RQDARPGGLPAPHGGGVHLRNEQGRAS 164 P+P +P G+ R G+ PH GG+H R+ G S Sbjct: 450 PIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYS 489
>UHRF2_HUMAN (Q96PU4) Ubiquitin-like PHD and RING finger domain-containing| protein 2 (EC 6.3.2.-) (Ubiquitin-like-containing PHD and RING finger domains protein 2) (Np95/ICBP90-like RING finger protein) (Np95-like RING finger protein) (Nuclear zinc finger Length = 802 Score = 29.6 bits (65), Expect = 8.7 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%) Frame = +3 Query: 54 PVPELPAGAR---RQDARPGGLPAPHGGGVHLRNEQGRAS 164 P+P +P G+ R G+ PH GG+H R+ G S Sbjct: 449 PIPGIPVGSTWRFRVQVSEAGVHRPHVGGIHGRSNDGAYS 488
>GCSP_PHOLL (Q7N199) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 958 Score = 29.6 bits (65), Expect = 8.7 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%) Frame = -1 Query: 528 PRITLHSAPALLV--VEKSCRAEGRKINDLGLPIEDELGECCTGNWSIEDPP 379 P ++ A L+V E + E + D L I E+G+ G WS+ED P Sbjct: 844 PTMSFPVAGTLMVEPTESESKVEIDRFVDAMLAIRAEIGKVAKGEWSLEDNP 895
>SIAS_HUMAN (Q9NR45) Sialic acid synthase (N-acetylneuraminate synthase) (EC| 2.5.1.56) (N-acetylneuraminic acid synthase) (N-acetylneuraminate-9-phosphate synthase) (EC 2.5.1.57) (N-acetylneuraminic acid phosphate synthase) Length = 359 Score = 29.6 bits (65), Expect = 8.7 Identities = 20/51 (39%), Positives = 29/51 (56%) Frame = +3 Query: 435 WAGQDR*SCALQPGKISQQQEEQARSVM*SEVPAKLGNPNKKILLRILACN 587 W G D S +L+PG+++ E RSV V LG+P K++L +ACN Sbjct: 245 WKGSDH-SASLEPGELA----ELVRSVR--LVERALGSPTKQLLPCEMACN 288
>RTJK_DROFU (P21329) RNA-directed DNA polymerase from mobile element jockey (EC| 2.7.7.49) (Reverse transcriptase) Length = 916 Score = 29.6 bits (65), Expect = 8.7 Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 8/78 (10%) Frame = +1 Query: 244 QLKTEEGAEVVAEQACYLPCTDDGL--------PVIGEMPGVKGCYVATGHSCWGILNAP 399 QL+T EG V+A A YLP + + V+G G Y A H+ WG A Sbjct: 96 QLQTAEGPVVLA--AVYLPPRERWIRAEFESLFAVLGNKFIAGGDYNAK-HAWWGNSRAC 152 Query: 400 VTGAALAELILDGQAKIV 453 G L E++ +GQ +I+ Sbjct: 153 ARGKVLQEVVANGQYQIL 170
>MTOX_ECOLI (P40874) N-methyl-L-tryptophan oxidase (EC 1.5.3.-) (MTOX)| Length = 372 Score = 29.6 bits (65), Expect = 8.7 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 4/65 (6%) Frame = +1 Query: 301 CTDDGLP----VIGEMPGVKGCYVATGHSCWGILNAPVTGAALAELILDGQAKIVDLAPF 468 CT D P +I +PG + TG S G A V G A+ D ++ DL PF Sbjct: 308 CTYDNSPDEDFIIDTLPGHDNTLLITGLSGHGFKFASVLGEIAADFAQDKKSDF-DLTPF 366 Query: 469 SPARF 483 +RF Sbjct: 367 RLSRF 371 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 109,129,002 Number of Sequences: 219361 Number of extensions: 2621623 Number of successful extensions: 7903 Number of sequences better than 10.0: 55 Number of HSP's better than 10.0 without gapping: 7269 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7892 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6541540170 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
