ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basdo07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 371 2e-99
2gb|AY105159.1| Zea mays PCO075778 mRNA sequence 321 2e-84
3gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence 305 1e-79
4dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
5dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic D... 264 3e-67
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
7dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, comp... 46 0.15
10dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 2.3
11ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.2
12gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete se... 40 9.2
13emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in... 40 9.2
14gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, comp... 40 9.2
15gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotea... 40 9.2
16gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, compl... 40 9.2
17gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 9.2
18gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence 40 9.2

>dbj|AK105193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-D11, full
            insert sequence
          Length = 1364

 Score =  371 bits (187), Expect = 2e-99
 Identities = 373/435 (85%)
 Strand = Plus / Plus

                                                                        
Query: 54   cctgttcctgagctaccagccggagcccggcgccaagatgctcgacccggaggtctaccc 113
            ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741  cctgttcctcagctaccagccagagcccggcgccaagatgctcgacccggaggtctaccc 800

                                                                        
Query: 114  gcgccccacgggggaggtgtacatctgcggaatgagcaaggacgagcaagttccagatga 173
            ||| ||||| |||||||||||||| || ||||||| |||||| ||| | || || |||||
Sbjct: 801  gcggcccaccggggaggtgtacatttgtggaatgaccaaggatgaggaggtgcccgatga 860

                                                                        
Query: 174  tccggcaacgattgccggggagcctgactccattgcaatgcttcataagattgctgggag 233
             ||||  |||||  |||| ||||| ||||| ||||| ||||| || ||||| || |||||
Sbjct: 861  cccggagacgatcaccggtgagccggactcaattgcgatgctgcacaagatcgccgggag 920

                                                                        
Query: 234  ggtgtccagccagctcaagacagaggagggcgcagaggtagtcgcggaacaggcctgcta 293
            ||| ||| ||||||| ||||  ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct: 921  ggtttccggccagctgaagagggaggaaggcgcggaggtggtggcggagcaggcttgcta 980

                                                                        
Query: 294  cctcccgtgcaccgatgacgggctgccggtcattggggaaatgcccggggtgaagggatg 353
            ||| |||||||||||||||||  ||||||| || ||||| ||||| || |||||||| ||
Sbjct: 981  cctgccgtgcaccgatgacggtttgccggtgatcggggagatgcctggagtgaagggttg 1040

                                                                        
Query: 354  ctacgttgcaaccgggcacagctgctgggggatcctcaatgctccagttaccggtgcagc 413
            ||| || || |||||||||||||||||||||||||||||||||||||  |||||||| ||
Sbjct: 1041 ctatgtcgccaccgggcacagctgctgggggatcctcaatgctccagccaccggtgccgc 1100

                                                                        
Query: 414  actcgccgagctcatcctcgatgggcaggccaagatcgttgatcttgcgcccttcagccc 473
             ||||| |||||||||||||| ||  | ||||||||||| ||||| ||||| ||||||||
Sbjct: 1101 tctcgcagagctcatcctcgacggcgatgccaagatcgtcgatctcgcgccgttcagccc 1160

                           
Query: 474  ggcaagatttctcaa 488
             ||||| ||||||||
Sbjct: 1161 agcaaggtttctcaa 1175



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>gb|AY105159.1| Zea mays PCO075778 mRNA sequence
          Length = 604

 Score =  321 bits (162), Expect = 2e-84
 Identities = 354/418 (84%)
 Strand = Plus / Minus

                                                                       
Query: 71  agccggagcccggcgccaagatgctcgacccggaggtctacccgcgccccacgggggagg 130
           ||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||
Sbjct: 599 agccggagcccggcgccaagatgctcgaccccgaggtgtacccgcggcccaccggggagg 540

                                                                       
Query: 131 tgtacatctgcggaatgagcaaggacgagcaagttccagatgatccggcaacgattgccg 190
           ||||||| || || ||||||||||||||| |    |||||||| || |||||||| |  |
Sbjct: 539 tgtacatatgtgggatgagcaaggacgagaacccgccagatgacccagcaacgatagtag 480

                                                                       
Query: 191 gggagcctgactccattgcaatgcttcataagattgctgggagggtgtccagccagctca 250
           | ||||| ||||| ||||||||||| |||||||| || || |  |||||||||||||| |
Sbjct: 479 gcgagccagactcgattgcaatgctgcataagatcgcaggcaaagtgtccagccagctga 420

                                                                       
Query: 251 agacagaggagggcgcagaggtagtcgcggaacaggcctgctacctcccgtgcaccgatg 310
           |||  ||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||  |
Sbjct: 419 agaaggaggagggcgctgaggtggtcgcggagcaggcgtgctacctgccgtgcaccgccg 360

                                                                       
Query: 311 acgggctgccggtcattggggaaatgcccggggtgaagggatgctacgttgcaaccgggc 370
           |||||||||||||||| ||||| || || || ||||| || ||||| || || || || |
Sbjct: 359 acgggctgccggtcatcggggagataccaggcgtgaaagggtgctatgtggccacgggcc 300

                                                                       
Query: 371 acagctgctgggggatcctcaatgctccagttaccggtgcagcactcgccgagctcatcc 430
           ||||||||||||| |||||||||| ||| |  ||||| ||||| ||||||||||||||||
Sbjct: 299 acagctgctggggtatcctcaatggtccggccaccggcgcagccctcgccgagctcatcc 240

                                                                     
Query: 431 tcgatgggcaggccaagatcgttgatcttgcgcccttcagcccggcaagatttctcaa 488
           | || ||  || |||||||||||||||| | ||| |||||||||||||| ||||||||
Sbjct: 239 tggacggcaagtccaagatcgttgatctcgagcctttcagcccggcaaggtttctcaa 182



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>gb|BT017394.1| Zea mays clone EL01N0327H09.c mRNA sequence
          Length = 711

 Score =  305 bits (154), Expect = 1e-79
 Identities = 397/477 (83%), Gaps = 1/477 (0%)
 Strand = Plus / Plus

                                                                       
Query: 12  gtgctccggccgcgcaaccccgacaagnataacaccgcactgcctgttcctgagctacca 71
           ||||||||||||||| | ||||| |||  | || ||||||||||| ||||| ||||||||
Sbjct: 177 gtgctccggccgcgcgagcccgagaagg-tcacgccgcactgcctcttcctcagctacca 235

                                                                       
Query: 72  gccggagcccggcgccaagatgctcgacccggaggtctacccgcgccccacgggggaggt 131
           |||||||||||||||||||||||||||||| ||||| |||||||| ||      ||||||
Sbjct: 236 gccggagcccggcgccaagatgctcgaccccgaggtgtacccgcggccttttttggaggt 295

                                                                       
Query: 132 gtacatctgcggaatgagcaaggacgagcaagttccagatgatccggcaacgattgccgg 191
           |||||| || || |||||| |||| ||| |    |||||||| || |||||||| |  ||
Sbjct: 296 gtacatatgtgggatgagctaggaggagaacccgccagatgacccagcaacgatagtagg 355

                                                                       
Query: 192 ggagcctgactccattgcaatgcttcataagattgctgggagggtgtccagccagctcaa 251
            ||||| ||||| ||||||||||| |||||||| || || |  |||||||||||||| ||
Sbjct: 356 cgagccagactcgattgcaatgctgcataagatcgcaggcaaagtgtccagccagctgaa 415

                                                                       
Query: 252 gacagaggagggcgcagaggtagtcgcggaacaggcctgctacctcccgtgcaccgatga 311
           ||  ||||||||||| ||||| |||||||| ||||| |||||||| ||||||||||  ||
Sbjct: 416 gaaggaggagggcgctgaggtggtcgcggagcaggcgtgctacctgccgtgcaccgccga 475

                                                                       
Query: 312 cgggctgccggtcattggggaaatgcccggggtgaagggatgctacgttgcaaccgggca 371
           ||||||||||||||| ||||| || || || ||||| || ||||| || || || || ||
Sbjct: 476 cgggctgccggtcatcggggagataccaggcgtgaaagggtgctatgtggccacgggcca 535

                                                                       
Query: 372 cagctgctgggggatcctcaatgctccagttaccggtgcagcactcgccgagctcatcct 431
           |||||||||||| |||||||||| ||| |  ||||| ||||| |||||||||||||||||
Sbjct: 536 cagctgctggggtatcctcaatggtccggccaccggcgcagccctcgccgagctcatcct 595

                                                                    
Query: 432 cgatgggcaggccaagatcgttgatcttgcgcccttcagcccggcaagatttctcaa 488
            || ||  || |||||||||||||||| | ||| |||||||||||||| ||||||||
Sbjct: 596 ggacggcaagtccaagatcgttgatctcgagcctttcagcccggcaaggtttctcaa 652



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  264 bits (133), Expect = 3e-67
 Identities = 307/365 (84%)
 Strand = Plus / Plus

                                                                           
Query: 124     ggggaggtgtacatctgcggaatgagcaaggacgagcaagttccagatgatccggcaacg 183
               |||||||||||||| || ||||||| |||||| ||| | || || ||||| ||||  |||
Sbjct: 2978282 ggggaggtgtacatttgtggaatgaccaaggatgaggaggtgcccgatgacccggagacg 2978341

                                                                           
Query: 184     attgccggggagcctgactccattgcaatgcttcataagattgctgggagggtgtccagc 243
               ||  |||| ||||| ||||| ||||| ||||| || ||||| || |||||||| ||| ||
Sbjct: 2978342 atcaccggtgagccggactcaattgcgatgctgcacaagatcgccgggagggtttccggc 2978401

                                                                           
Query: 244     cagctcaagacagaggagggcgcagaggtagtcgcggaacaggcctgctacctcccgtgc 303
               ||||| ||||  ||||| ||||| ||||| || ||||| ||||| |||||||| ||||||
Sbjct: 2978402 cagctgaagagggaggaaggcgcggaggtggtggcggagcaggcttgctacctgccgtgc 2978461

                                                                           
Query: 304     accgatgacgggctgccggtcattggggaaatgcccggggtgaagggatgctacgttgca 363
               |||||||||||  ||||||| || ||||| ||||| || |||||||| ||||| || || 
Sbjct: 2978462 accgatgacggtttgccggtgatcggggagatgcctggagtgaagggttgctatgtcgcc 2978521

                                                                           
Query: 364     accgggcacagctgctgggggatcctcaatgctccagttaccggtgcagcactcgccgag 423
               |||||||||||||||||||||||||||||||||||||  |||||||| || ||||| |||
Sbjct: 2978522 accgggcacagctgctgggggatcctcaatgctccagccaccggtgccgctctcgcagag 2978581

                                                                           
Query: 424     ctcatcctcgatgggcaggccaagatcgttgatcttgcgcccttcagcccggcaagattt 483
               ||||||||||| ||  | ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct: 2978582 ctcatcctcgacggcgatgccaagatcgtcgatctcgcgccgttcagcccagcaaggttt 2978641

                    
Query: 484     ctcaa 488
               |||||
Sbjct: 2978642 ctcaa 2978646



 Score =  113 bits (57), Expect = 8e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                           
Query: 54      cctgttcctgagctaccagccggagcccggcgccaagatgctcgacccggaggtctaccc 113
               ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2978119 cctgttcctcagctaccagccagagcccggcgccaagatgctcgacccggaggtctaccc 2978178

                        
Query: 114     gcgccccac 122
               ||| |||||
Sbjct: 2978179 gcggcccac 2978187



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>dbj|AP005409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0024L18
          Length = 150128

 Score =  264 bits (133), Expect = 3e-67
 Identities = 307/365 (84%)
 Strand = Plus / Plus

                                                                         
Query: 124   ggggaggtgtacatctgcggaatgagcaaggacgagcaagttccagatgatccggcaacg 183
             |||||||||||||| || ||||||| |||||| ||| | || || ||||| ||||  |||
Sbjct: 24337 ggggaggtgtacatttgtggaatgaccaaggatgaggaggtgcccgatgacccggagacg 24396

                                                                         
Query: 184   attgccggggagcctgactccattgcaatgcttcataagattgctgggagggtgtccagc 243
             ||  |||| ||||| ||||| ||||| ||||| || ||||| || |||||||| ||| ||
Sbjct: 24397 atcaccggtgagccggactcaattgcgatgctgcacaagatcgccgggagggtttccggc 24456

                                                                         
Query: 244   cagctcaagacagaggagggcgcagaggtagtcgcggaacaggcctgctacctcccgtgc 303
             ||||| ||||  ||||| ||||| ||||| || ||||| ||||| |||||||| ||||||
Sbjct: 24457 cagctgaagagggaggaaggcgcggaggtggtggcggagcaggcttgctacctgccgtgc 24516

                                                                         
Query: 304   accgatgacgggctgccggtcattggggaaatgcccggggtgaagggatgctacgttgca 363
             |||||||||||  ||||||| || ||||| ||||| || |||||||| ||||| || || 
Sbjct: 24517 accgatgacggtttgccggtgatcggggagatgcctggagtgaagggttgctatgtcgcc 24576

                                                                         
Query: 364   accgggcacagctgctgggggatcctcaatgctccagttaccggtgcagcactcgccgag 423
             |||||||||||||||||||||||||||||||||||||  |||||||| || ||||| |||
Sbjct: 24577 accgggcacagctgctgggggatcctcaatgctccagccaccggtgccgctctcgcagag 24636

                                                                         
Query: 424   ctcatcctcgatgggcaggccaagatcgttgatcttgcgcccttcagcccggcaagattt 483
             ||||||||||| ||  | ||||||||||| ||||| ||||| |||||||| ||||| |||
Sbjct: 24637 ctcatcctcgacggcgatgccaagatcgtcgatctcgcgccgttcagcccagcaaggttt 24696

                  
Query: 484   ctcaa 488
             |||||
Sbjct: 24697 ctcaa 24701



 Score =  113 bits (57), Expect = 8e-22
 Identities = 66/69 (95%)
 Strand = Plus / Plus

                                                                         
Query: 54    cctgttcctgagctaccagccggagcccggcgccaagatgctcgacccggaggtctaccc 113
             ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 24174 cctgttcctcagctaccagccagagcccggcgccaagatgctcgacccggaggtctaccc 24233

                      
Query: 114   gcgccccac 122
             ||| |||||
Sbjct: 24234 gcggcccac 24242



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Minus

                                                                            
Query: 229      gggagggtgtccagccagctcaagacagaggagggcgcagaggtagtcgcggaacaggcc 288
                |||||||||||||||||||| ||||  ||||| ||||| ||||| || ||||| ||||| 
Sbjct: 23298257 gggagggtgtccagccagctgaagagggaggaaggcgcggaggtggtggcggagcaggct 23298198

                                                                            
Query: 289      tgctacctcccgtgcaccgatgacgggctgccggtcattggggaaatgcccggggtgaag 348
                |||||| | |||||||||  ||||||| ||||||| || || || ||||| |||||||||
Sbjct: 23298197 tgctacatgccgtgcaccagtgacgggttgccggtgatcggagagatgcctggggtgaag 23298138

                                                                            
Query: 349      ggatgctacgttgcaaccgggcacagctgctgggggatcctcaatgctccagttaccggt 408
                || |||||||| || ||||||||| || | ||||| |||||||| ||||| |  ||||| 
Sbjct: 23298137 ggttgctacgtcgccaccgggcacggcgggtggggaatcctcaacgctccggccaccggc 23298078

                                        
Query: 409      gcagcactcgccgagctcatcctc 432
                || || ||||| ||||||||||||
Sbjct: 23298077 gctgcgctcgcggagctcatcctc 23298054



 Score =  101 bits (51), Expect = 3e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                            
Query: 12       gtgctccggccgcgcaaccccgacaagnataacaccgcactgcctgttcctgagctacca 71
                ||||||||||||||  | ||||||||| || || ||||||   |||||||| ||||||||
Sbjct: 23298573 gtgctccggccgcgtgagcccgacaag-atgacgccgcacgcgctgttcctcagctacca 23298515

                                                                   
Query: 72       gccggagcccggcgccaagatgctcgacccggaggtctacccgcgccccac 122
                 ||||||||||||||||||||||||| ||||||| |||||||||| |||||
Sbjct: 23298514 accggagcccggcgccaagatgctcgccccggagatctacccgcggcccac 23298464



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>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1103C09
          Length = 163996

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Minus

                                                                         
Query: 229   gggagggtgtccagccagctcaagacagaggagggcgcagaggtagtcgcggaacaggcc 288
             |||||||||||||||||||| ||||  ||||| ||||| ||||| || ||||| ||||| 
Sbjct: 23955 gggagggtgtccagccagctgaagagggaggaaggcgcggaggtggtggcggagcaggct 23896

                                                                         
Query: 289   tgctacctcccgtgcaccgatgacgggctgccggtcattggggaaatgcccggggtgaag 348
             |||||| | |||||||||  ||||||| ||||||| || || || ||||| |||||||||
Sbjct: 23895 tgctacatgccgtgcaccagtgacgggttgccggtgatcggagagatgcctggggtgaag 23836

                                                                         
Query: 349   ggatgctacgttgcaaccgggcacagctgctgggggatcctcaatgctccagttaccggt 408
             || |||||||| || ||||||||| || | ||||| |||||||| ||||| |  ||||| 
Sbjct: 23835 ggttgctacgtcgccaccgggcacggcgggtggggaatcctcaacgctccggccaccggc 23776

                                     
Query: 409   gcagcactcgccgagctcatcctc 432
             || || ||||| ||||||||||||
Sbjct: 23775 gctgcgctcgcggagctcatcctc 23752



 Score =  101 bits (51), Expect = 3e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                         
Query: 12    gtgctccggccgcgcaaccccgacaagnataacaccgcactgcctgttcctgagctacca 71
             ||||||||||||||  | ||||||||| || || ||||||   |||||||| ||||||||
Sbjct: 24271 gtgctccggccgcgtgagcccgacaag-atgacgccgcacgcgctgttcctcagctacca 24213

                                                                
Query: 72    gccggagcccggcgccaagatgctcgacccggaggtctacccgcgccccac 122
              ||||||||||||||||||||||||| ||||||| |||||||||| |||||
Sbjct: 24212 accggagcccggcgccaagatgctcgccccggagatctacccgcggcccac 24162



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>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0451D05
          Length = 148381

 Score =  135 bits (68), Expect = 2e-28
 Identities = 170/204 (83%)
 Strand = Plus / Minus

                                                                         
Query: 229   gggagggtgtccagccagctcaagacagaggagggcgcagaggtagtcgcggaacaggcc 288
             |||||||||||||||||||| ||||  ||||| ||||| ||||| || ||||| ||||| 
Sbjct: 84999 gggagggtgtccagccagctgaagagggaggaaggcgcggaggtggtggcggagcaggct 84940

                                                                         
Query: 289   tgctacctcccgtgcaccgatgacgggctgccggtcattggggaaatgcccggggtgaag 348
             |||||| | |||||||||  ||||||| ||||||| || || || ||||| |||||||||
Sbjct: 84939 tgctacatgccgtgcaccagtgacgggttgccggtgatcggagagatgcctggggtgaag 84880

                                                                         
Query: 349   ggatgctacgttgcaaccgggcacagctgctgggggatcctcaatgctccagttaccggt 408
             || |||||||| || ||||||||| || | ||||| |||||||| ||||| |  ||||| 
Sbjct: 84879 ggttgctacgtcgccaccgggcacggcgggtggggaatcctcaacgctccggccaccggc 84820

                                     
Query: 409   gcagcactcgccgagctcatcctc 432
             || || ||||| ||||||||||||
Sbjct: 84819 gctgcgctcgcggagctcatcctc 84796



 Score =  101 bits (51), Expect = 3e-18
 Identities = 97/111 (87%), Gaps = 1/111 (0%)
 Strand = Plus / Minus

                                                                         
Query: 12    gtgctccggccgcgcaaccccgacaagnataacaccgcactgcctgttcctgagctacca 71
             ||||||||||||||  | ||||||||| || || ||||||   |||||||| ||||||||
Sbjct: 85315 gtgctccggccgcgtgagcccgacaag-atgacgccgcacgcgctgttcctcagctacca 85257

                                                                
Query: 72    gccggagcccggcgccaagatgctcgacccggaggtctacccgcgccccac 122
              ||||||||||||||||||||||||| ||||||| |||||||||| |||||
Sbjct: 85256 accggagcccggcgccaagatgctcgccccggagatctacccgcggcccac 85206



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>gb|AC112676.8| Mus musculus chromosome 9, clone RP23-174F7, complete sequence
          Length = 230293

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 368    ggcacagctgctgggggatcctc 390
              |||||||||||||||||||||||
Sbjct: 190398 ggcacagctgctgggggatcctc 190376



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>dbj|AP002833.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-688I9, complete
              sequence
          Length = 175562

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gctcaagacagaggagggcgc 266
              |||||||||||||||||||||
Sbjct: 118017 gctcaagacagaggagggcgc 118037



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>ref|XM_656096.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3584.2), mRNA
          Length = 1464

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 413 cactcgccgagctcatcctc 432
           ||||||||||||||||||||
Sbjct: 148 cactcgccgagctcatcctc 129



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>gb|AC184077.2| Populus trichocarpa clone Pop1-53L15, complete sequence
          Length = 28233

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                     
Query: 328   ggggaaatgcccggggtgaagggatgctacgttgcaaccgggcacagctgctgggg 383
             ||||| || |||||||||||||| || || ||||| || ||||||| ||| |||||
Sbjct: 16800 ggggagattcccggggtgaagggttgttatgttgccactgggcacaactgttgggg 16855



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>emb|BX897741.9| Zebrafish DNA sequence from clone DKEY-273O13 in linkage group 5,
             complete sequence
          Length = 168673

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   atttctcaacaacaagaaga 499
             ||||||||||||||||||||
Sbjct: 22874 atttctcaacaacaagaaga 22893



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>gb|AC104450.2| Homo sapiens chromosome 3 clone RP11-493K19, complete sequence
          Length = 217337

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   gagggtgtccagccagctca 250
             ||||||||||||||||||||
Sbjct: 86915 gagggtgtccagccagctca 86896



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>gb|AF291662.1| Aspergillus nidulans Kex2-like dibasic endoprotease ANPC gene,
            complete cds
          Length = 4688

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 413  cactcgccgagctcatcctc 432
            ||||||||||||||||||||
Sbjct: 3908 cactcgccgagctcatcctc 3889



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>gb|AC009490.10| Homo sapiens BAC clone RP11-355A23 from 2, complete sequence
          Length = 158692

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 478   agatttctcaacaacaagaa 497
             ||||||||||||||||||||
Sbjct: 68714 agatttctcaacaacaagaa 68733



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>gb|AC151747.3| Ornithorhynchus anatinus chromosome UNK clone OABb-520P24, complete
            sequence
          Length = 142317

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 599  ggggacaccaaatcaaataatgta 622
            |||||||| |||||||||||||||
Sbjct: 3496 ggggacacaaaatcaaataatgta 3519



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>gb|AC004814.2|AC004814 Homo sapiens clone 3938P1, complete sequence
          Length = 83030

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gagggtgtccagccagctca 250
            ||||||||||||||||||||
Sbjct: 8156 gagggtgtccagccagctca 8137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,590,508
Number of Sequences: 3902068
Number of extensions: 4590508
Number of successful extensions: 77407
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77306
Number of HSP's gapped (non-prelim): 96
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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