>CIGR2_ORYSA (Q8GVE1) Chitin-inducible gibberellin-responsive protein 2|
          Length = 544

 Score =  134 bits (337), Expect = 6e-32
 Identities = 64/92 (69%), Positives = 82/92 (89%)
 Frame = +2

Query: 2   GAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHLLYDICPFFKFGYMSANGAI 181
           GAYM+EGLVAR  S+G ++YK+LKCKEP+  +S+L+SYMH LY+ CP+FKFGYMSANGAI
Sbjct: 215 GAYMVEGLVARLASSGISIYKALKCKEPK--SSDLLSYMHFLYEACPYFKFGYMSANGAI 272

Query: 182 AEAVKGENFIHIIDFQIAQGSQXVTMIQALAA 277
           AEAVKGE+ IHIIDF I+QG+Q ++++QALAA
Sbjct: 273 AEAVKGEDRIHIIDFHISQGAQWISLLQALAA 304

>CIGR1_ORYSA (Q69VG1) Chitin-inducible gibberellin-responsive protein 1|
          Length = 571

 Score =  130 bits (327), Expect = 9e-31
 Identities = 62/92 (67%), Positives = 81/92 (88%)
 Frame = +2

Query: 2   GAYMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHLLYDICPFFKFGYMSANGAI 181
           GAY+LEGLVAR  ++G  +Y++LKC+EP+  + EL+SYM +LY+ICP+FKFGYM+ANGAI
Sbjct: 242 GAYLLEGLVARHGNSGTNIYRALKCREPE--SKELLSYMRILYNICPYFKFGYMAANGAI 299

Query: 182 AEAVKGENFIHIIDFQIAQGSQXVTMIQALAA 277
           AEA++ EN IHIIDFQIAQG+Q +T+IQALAA
Sbjct: 300 AEALRTENNIHIIDFQIAQGTQWITLIQALAA 331

>NSP2_MEDTR (Q5NE24) Nodulation signaling pathway 2 protein|
          Length = 508

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 26/65 (40%), Positives = 42/65 (64%)
 Frame = +2

Query: 83  PQPTNSELMSYMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMI 262
           P    ++ ++   LL D+ P+ KFG+ +AN AI EAV  E  +H+ID+ I +G Q  ++I
Sbjct: 198 PHDNQNDTLAAFQLLQDMSPYVKFGHFTANQAIIEAVAHERRVHVIDYDIMEGVQWASLI 257

Query: 263 QALAA 277
           Q+LA+
Sbjct: 258 QSLAS 262

>GAI1_VITVI (Q8S4W7) DELLA protein GAI1 (Gibberellic acid-insensitive mutant|
           protein 1) (VvGAI1)
          Length = 590

 Score = 57.8 bits (138), Expect = 7e-09
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
 Frame = +2

Query: 8   YMLEGLVARRYSTGHALYKSLKCKEPQPTNSELMSYMHL-LYDICPFFKFGYMSANGAIA 184
           Y  EGL  R Y     LY        +P +S     + +  Y+ CP+ KF + +AN AI 
Sbjct: 257 YFAEGLARRIYR----LYPD------KPLDSSFSDILQMHFYETCPYLKFAHFTANQAIL 306

Query: 185 EAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           EA +G+  +H+IDF + QG Q   ++QALA
Sbjct: 307 EAFEGKKRVHVIDFSMKQGMQWPALMQALA 336

>GAI_LYCES (Q7Y1B6) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein)
          Length = 588

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
 Frame = +2

Query: 89  PTNSELMSYMHLL----YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVT 256
           P +S   SY  +L    Y+ CP+ KF + +AN AI EA  G N +H+IDF + QG Q   
Sbjct: 256 PQDSMESSYTDVLQMHFYETCPYLKFAHFTANQAILEAFTGCNKVHVIDFSLKQGMQWPA 315

Query: 257 MIQALA 274
           ++QALA
Sbjct: 316 LMQALA 321

>RHT1_WHEAT (Q9ST59) DELLA protein RHT-1 (Reduced height protein 1) (Protein|
           Rht-B1/Rht-D1)
          Length = 623

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
 Frame = +2

Query: 47  GHALYKSLKCKEPQPTNSEL-MSYMHLL----YDICPFFKFGYMSANGAIAEAVKGENFI 211
           G AL + +    PQP +S L  ++  LL    Y+ CP+ KF + +AN AI EA  G   +
Sbjct: 279 GEALARRVFRFRPQPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRV 338

Query: 212 HIIDFQIAQGSQXVTMIQALA 274
           H++DF I QG Q   ++QALA
Sbjct: 339 HVVDFGIKQGMQWPALLQALA 359

>SLN1_HORVU (Q8W127) DELLA protein SLN1 (Slender protein 1)|
          Length = 618

 Score = 56.2 bits (134), Expect = 2e-08
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
 Frame = +2

Query: 47  GHALYKSLKCKEPQPTNSEL-MSYMHLL----YDICPFFKFGYMSANGAIAEAVKGENFI 211
           G AL + +    PQP +S L  ++  LL    Y+ CP+ KF + +AN AI EA  G   +
Sbjct: 275 GEALARRVFRFRPQPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRV 334

Query: 212 HIIDFQIAQGSQXVTMIQALA 274
           H++DF I QG Q   ++QALA
Sbjct: 335 HVVDFGIKQGMQWPALLQALA 355

>GAIP_CUCMA (Q6EI06) DELLA protein GAIP (Gibberellic acid-insensitive phloem|
           protein) (GAIP) (CmGAIP)
          Length = 579

 Score = 55.8 bits (133), Expect = 3e-08
 Identities = 27/56 (48%), Positives = 37/56 (66%)
 Frame = +2

Query: 107 MSYMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           M  MH  Y+ CP+ KF + +AN AI EA +G+  +H+IDF + QG Q   +IQALA
Sbjct: 279 MLQMHF-YESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGIQWPALIQALA 333

>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (Restoration of growth on ammonia protein 2)
          Length = 533

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 25/53 (47%), Positives = 37/53 (69%)
 Frame = +2

Query: 116 MHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           MH  Y+ CP+ KF + +AN AI EA +G+  +H+IDF ++QG Q   ++QALA
Sbjct: 241 MHF-YETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALA 292

>RGA1_BRACM (Q5BN23) DELLA protein RGA1 (RGA-like protein 1) (BrRGA1)|
          Length = 573

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 116 MHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           MH  Y+ CP+ KF + +AN AI EA +G+  +H+IDF + QG Q   ++QALA
Sbjct: 280 MHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALA 331

>RGA_ARATH (Q9SLH3) DELLA protein RGA (Repressor on the ga1-3 mutant)|
           (GAI-related sequence) (Restoration of growth on ammonia
           protein 1)
          Length = 587

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 116 MHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           MH  Y+ CP+ KF + +AN AI EA +G+  +H+IDF + QG Q   ++QALA
Sbjct: 293 MHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALA 344

>DWRF8_MAIZE (Q9ST48) DELLA protein DWARF8 (Protein dwarf-8)|
          Length = 630

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
 Frame = +2

Query: 47  GHALYKSLKCKEPQPTNSEL-MSYMHLL----YDICPFFKFGYMSANGAIAEAVKGENFI 211
           G AL + +    P P +S L  ++  LL    Y+ CP+ KF + +AN AI EA  G   +
Sbjct: 288 GEALARRVYRFRPPPDSSLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRV 347

Query: 212 HIIDFQIAQGSQXVTMIQALA 274
           H++DF I QG Q   ++QALA
Sbjct: 348 HVVDFGIKQGMQWPALLQALA 368

>RGA2_BRACM (Q5BN22) DELLA protein RGA2 (RGA-like protein 2) (BrRGA2)|
          Length = 579

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 25/53 (47%), Positives = 36/53 (67%)
 Frame = +2

Query: 116 MHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           MH  Y+ CP+ KF + +AN AI EA +G+  +H+IDF + QG Q   ++QALA
Sbjct: 286 MHF-YETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALA 337

>SLR1_ORYSA (Q7G7J6) DELLA protein SLR1 (Protein SLENDER RICE1) (Gibberellic|
           acid-insensitive mutant protein) (OsGAI)
          Length = 625

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/49 (46%), Positives = 33/49 (67%)
 Frame = +2

Query: 128 YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           Y+ CP+ KF + +AN AI EA  G + +H++DF I QG Q   ++QALA
Sbjct: 317 YESCPYLKFAHFTANQAILEAFAGCHRVHVVDFGIKQGMQWPALLQALA 365

>RGL3_ARATH (Q9LF53) DELLA protein RGL3 (RGA-like protein 3)|
          Length = 523

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = +2

Query: 128 YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           YD CP+ KF + +AN AI EAV     +H+ID  + QG Q   ++QALA
Sbjct: 232 YDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALA 280

>RGL2_ARATH (Q8GXW1) DELLA protein RGL2 (RGA-like protein 2) (Scarecrow-like|
           protein 19)
          Length = 547

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 27/67 (40%), Positives = 39/67 (58%)
 Frame = +2

Query: 74  CKEPQPTNSELMSYMHLLYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXV 253
           C    P+  E++  MH  Y+ CP+ KF + +AN AI EAV     +H+ID  + QG Q  
Sbjct: 243 CAAVNPSFEEVLE-MHF-YESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWP 300

Query: 254 TMIQALA 274
            ++QALA
Sbjct: 301 ALMQALA 307

>GAIPB_CUCMA (Q6EI05) DELLA protein GAIP-B (Gibberellic acid-insensitive phloem|
           protein B) (GAIP-B) (CmGAIP-B)
          Length = 587

 Score = 50.8 bits (120), Expect = 9e-07
 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = +2

Query: 74  CKEPQPTNSELMSYMHL-LYDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQX 250
           C E  P +  +   + L  Y+  P+ KF + +AN AI EA +G+  +H+IDF + QG Q 
Sbjct: 274 CPE-NPLDHSMSDMLQLHFYESSPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQW 332

Query: 251 VTMIQALA 274
             ++QALA
Sbjct: 333 PALLQALA 340

>GAI_GOSHI (Q84TQ7) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (GhGAI)
          Length = 537

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = +2

Query: 128 YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           Y+ CP+ KF + +AN AI EA    + +H+IDF + QG Q   ++QALA
Sbjct: 245 YETCPYLKFAHFTANQAILEAFSMASRVHVIDFGLKQGMQWPALMQALA 293

>MOC_ORYSA (Q84MM9) Protein MONOCULM 1|
          Length = 441

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 20/47 (42%), Positives = 29/47 (61%)
 Frame = +2

Query: 134 ICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           I PF +F +++AN AI EAV G   +HI+D     G Q   ++QA+A
Sbjct: 133 IAPFLRFAHLTANQAILEAVDGARRVHILDLDAVHGVQWPPLLQAIA 179

>RGL1_ARATH (Q9C8Y3) DELLA protein RGL1 (RGA-like protein 1) (RGA-like protein)|
          Length = 511

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 20/49 (40%), Positives = 28/49 (57%)
 Frame = +2

Query: 128 YDICPFFKFGYMSANGAIAEAVKGENFIHIIDFQIAQGSQXVTMIQALA 274
           Y+ CP+ KF + +AN AI E       +H+ID  +  G Q   +IQALA
Sbjct: 227 YESCPYLKFAHFTANQAILEVFATAEKVHVIDLGLNHGLQWPALIQALA 275

>BACC_BACAM (Q8KWS9) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)|
          Length = 254

 Score = 31.2 bits (69), Expect = 0.72
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 247 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKF 149
           +AP+  +E++D NKVL +N  G   + +H  K+
Sbjct: 93  VAPIHEMELSDWNKVLNVNLTGMFLMSKHALKY 125

>BACC_BACSU (P39640) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)|
          Length = 253

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 247 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTK 152
           +AP+  +E++D NKVL +N  G   + +H  K
Sbjct: 93  VAPIHEMELSDWNKVLQVNLTGMFLMSKHALK 124

>BACC2_BACSU (Q8KWT4) Bacilysin biosynthesis oxidoreductase bacC (EC 1.-.-.-)|
          Length = 253

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = -1

Query: 247 LAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKF 149
           +AP+  +E+++ NKVL +N  G   + +H  K+
Sbjct: 93  VAPIHEMELSNWNKVLNVNLTGMFLMSKHALKY 125

>RL22_AERPE (Q9YF76) 50S ribosomal protein L22P|
          Length = 156

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/82 (26%), Positives = 31/82 (37%)
 Frame = -1

Query: 253 YPLAPLSNLEINDVNKVLTLNSLGYSTIGRHVTKFEEWTDIIEKMHVGHEL*ICRLRFLT 74
           Y L  L N+E N  NK L +  L    +  H                         + +T
Sbjct: 93  YMLKLLDNVEANAANKNLDVERLKIIHVAAH-------------------------KGIT 127

Query: 73  LQRFIQRMSSRITPRNKAFQHI 8
           L+R++ R   R TPRN+   HI
Sbjct: 128 LKRWMPRAWGRATPRNRVHSHI 149

>2AAB_ARATH (Q38950) Serine/threonine-protein phosphatase 2A 65 kDa regulatory|
           subunit A beta isoform (PP2A, subunit A, beta isoform)
           (AtA beta)
          Length = 587

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
 Frame = +2

Query: 35  RYSTGHALYKSLKCKEPQPTNSELM-SYMHLLYDICPFFKFGYMSANGAIAEAVKGENFI 211
           RY   + LY+  +   P+PT +EL+ +Y+ LL D           A   IA A K   F 
Sbjct: 258 RYMVANQLYELCEAVGPEPTRTELVPAYVRLLRD---------NEAEVRIAAAGKVTKFC 308

Query: 212 HIIDFQIA 235
            I++ +IA
Sbjct: 309 RILNPEIA 316

>POLG_TEV (P04517) Genome polyprotein [Contains: P1 proteinase (N-terminal|
           protein); Helper component proteinase (EC 3.4.22.45)
           (HC-pro); Protein P3; 6 kDa protein 1 (6K1); Cytoplasmic
           inclusion protein (EC 3.6.1.-) (CI); 6 kDa protein 2
           (6K2); Viral geno
          Length = 3054

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = -1

Query: 265 LYHSYPLAPLSNLEINDVNKVL-TLNSLGYSTIGRHVTKFEEWTDIIEKMHVGHE 104
           LY     A L  + ++  NK +  L+S G  T G H+ K    + +IE +H G E
Sbjct: 700 LYPDVLRAELPRILVDHDNKTMHVLDSYGSRTTGYHMLKMNTTSQLIEFVHSGLE 754


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,432,540
Number of Sequences: 219361
Number of extensions: 661290
Number of successful extensions: 1474
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1468
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)