Clone Name | basdn21 |
---|---|
Clone Library Name | barley_pub |
>SC5A3_HUMAN (P53794) Sodium/myo-inositol cotransporter (Na(+)/myo-inositol| cotransporter) Length = 718 Score = 30.4 bits (67), Expect = 2.3 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 1/47 (2%) Frame = +2 Query: 251 YTASG-FWRAGLNLFVATEKLLTNPAEKERLKTCILRAREHLDEKEN 388 Y A+G FW GL + + LLT P KE+++T ++++L KEN Sbjct: 513 YVATGLFWVTGLITVIVS--LLTPPPTKEQIRTTTFWSKKNLVVKEN 557
>TNPX_ECOLI (Q00042) Putative transposon gamma-delta 80.3 kDa protein| (Transposon Tn1000 protein tnpX) Length = 698 Score = 29.6 bits (65), Expect = 3.8 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%) Frame = +2 Query: 209 YSTVCRVATVLQTRYTASGFWRAGLNLFVATEKLLT------NPAEKERLKTCILRAREH 370 Y+ + +A+ + + Y S +++E LL N A+ + L+ C L A+E+ Sbjct: 110 YAMLMEIASYISSHYKLSSQ--------ISSETLLNEHLKKWNSAQGDILRKCRLVAKEY 161 Query: 371 LDEKENEESM 400 LDE EES+ Sbjct: 162 LDENNPEESI 171
>AMPA_NEIMA (Q9JTI8) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine| aminopeptidase) (LAP) (Leucyl aminopeptidase) Length = 468 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/34 (38%), Positives = 21/34 (61%) Frame = -1 Query: 310 QLLCCYEEVQTSAPESRCCISSLKDGCNTANRRV 209 QL C EE Q + P + +SSL++G N A+ ++ Sbjct: 18 QLFVCTEEAQLNHPTALALLSSLEEGQNFADTKI 51
>CSN11_KLULA (Q6CU48) COP9 signalosome complex subunit 11| Length = 389 Score = 29.3 bits (64), Expect = 5.0 Identities = 14/50 (28%), Positives = 28/50 (56%) Frame = +2 Query: 161 LRDRYDGASPALRESMYSTVCRVATVLQTRYTASGFWRAGLNLFVATEKL 310 L ++D S +R+ MY+ R+AT +Q Y + R G++ + T+++ Sbjct: 239 LEKKWDIISKTMRQKMYAFYLRIATKIQISYLSE---RVGISREIVTQEI 285
>CWC22_CANAL (Q59XY0) Pre-mRNA-splicing factor CWC22| Length = 648 Score = 28.9 bits (63), Expect = 6.6 Identities = 17/40 (42%), Positives = 21/40 (52%) Frame = +2 Query: 272 RAGLNLFVATEKLLTNPAEKERLKTCILRAREHLDEKENE 391 R LN+F E+ L + E LK IL +H DE ENE Sbjct: 265 RDHLNVFSVDEEYLDHENEYIELKKEILGETDHEDENENE 304
>MT2_CAEEL (P17512) Metallothionein-2 (MT-2) (Metallothionein-II) (MT-II)| (Metallothionein-like protein) (MT-Ce) Length = 62 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/28 (39%), Positives = 14/28 (50%) Frame = -1 Query: 301 CCYEEVQTSAPESRCCISSLKDGCNTAN 218 CC + +A E +CC S GC AN Sbjct: 27 CCEQYCCPTASEKKCCKSGCAGGCKCAN 54 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,210,399 Number of Sequences: 219361 Number of extensions: 650787 Number of successful extensions: 1802 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1780 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1802 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2909956200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)