No.
Definition
Score (bits)
E Value
1 ref|NM_197474.1| Oryza sativa (japonica cultivar-group) putative...
100
1e-17
2 gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 geno...
100
1e-17
3 gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 geno...
100
1e-17
4 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
100
1e-17
5 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
100
1e-17
6 gb|AF244704.1|AF244704 Zea mays glutathione S-transferase GST 39...
88
4e-14
7 gb|AY104418.1| Zea mays PCO115418 mRNA sequence
88
4e-14
8 gb|AF244698.1|AF244698 Zea mays glutathione S-transferase GST 33...
84
6e-13
9 ref|NM_197476.1| Oryza sativa (japonica cultivar-group) putative...
76
2e-10
10 ref|NM_197462.1| Oryza sativa (japonica cultivar-group) putative...
76
2e-10
11 gb|AF402799.1| Oryza sativa (japonica cultivar-group) clone RICS...
76
2e-10
12 gb|AF309379.1| Oryza sativa (japonica cultivar-group) clone S214...
76
2e-10
13 gb|AY271620.1| Oryza sativa (indica cultivar-group) tau class GS...
76
2e-10
14 gb|AF244697.1|AF244697 Zea mays glutathione S-transferase GST 32...
76
2e-10
15 gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...
76
2e-10
16 dbj|AK073944.1| Oryza sativa (japonica cultivar-group) cDNA clon...
76
2e-10
17 dbj|AK063773.1| Oryza sativa (japonica cultivar-group) cDNA clon...
76
2e-10
18 dbj|AK061304.1| Oryza sativa (japonica cultivar-group) cDNA clon...
76
2e-10
19 ref|NM_197484.1| Oryza sativa (japonica cultivar-group) putative...
70
9e-09
20 gb|AF402805.1| Oryza sativa (japonica cultivar-group) clone RICS...
70
9e-09
21 gb|AF402794.1| Oryza sativa (japonica cultivar-group) clone RICS...
70
9e-09
22 emb|AJ010449.1|AMY010449 Alopecurus myosuroides mRNA for glutath...
70
9e-09
23 emb|AJ010448.1|AMY010448 Alopecurus myosuroides mRNA for glutath...
70
9e-09
24 dbj|AK106212.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
25 dbj|AK060931.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
26 dbj|AK059882.1| Oryza sativa (japonica cultivar-group) cDNA clon...
70
9e-09
27 ref|NM_197480.1| Oryza sativa (japonica cultivar-group) putative...
68
4e-08
28 gb|AF402801.1| Oryza sativa (japonica cultivar-group) clone S140...
68
4e-08
29 dbj|AK059726.1| Oryza sativa (japonica cultivar-group) cDNA clon...
68
4e-08
30 ref|NM_197473.1| Oryza sativa (japonica cultivar-group) putative...
66
1e-07
31 gb|AF244691.1|AF244691 Zea mays glutathione S-transferase GST 26...
66
1e-07
32 dbj|AK108376.1| Oryza sativa (japonica cultivar-group) cDNA clon...
66
1e-07
33 ref|NM_197498.1| Oryza sativa (japonica cultivar-group) putative...
64
6e-07
34 dbj|AK109314.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
35 ref|NM_197486.1| Oryza sativa (japonica cultivar-group) putative...
62
2e-06
36 gb|AY013753.1| Aegilops tauschii glutathione-S-transferase 2 and...
60
9e-06
37 gb|AF244707.1|AF244707 Zea mays glutathione S-transferase GST 42...
60
9e-06
38 gb|AY107788.1| Zea mays PCO100973 mRNA sequence
60
9e-06
39 ref|NM_197485.1| Oryza sativa (japonica cultivar-group) putative...
58
4e-05
40 ref|NM_197445.1| Oryza sativa (japonica cultivar-group) putative...
58
4e-05
41 gb|AF402796.1| Oryza sativa (japonica cultivar-group) clone C110...
58
4e-05
42 gb|AF004358.1|AF004358 Aegilops tauschii glutathione S-transfera...
58
4e-05
43 ref|NM_197489.1| Oryza sativa (japonica cultivar-group) putative...
56
1e-04
44 ref|NM_197460.1| Oryza sativa (japonica cultivar-group) putative...
56
1e-04
45 gb|AF309380.1| Oryza sativa (japonica cultivar-group) clone C242...
56
1e-04
46 gb|AF244705.1|AF244705 Zea mays glutathione S-transferase GST 40...
56
1e-04
47 gb|AY064480.1| Triticum aestivum glutathione-S-transferase Cla47...
56
1e-04
48 ref|NM_197495.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
49 ref|NM_197487.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
50 ref|NM_197475.1| Oryza sativa (japonica cultivar-group) putative...
54
6e-04
51 gb|AF402795.1| Oryza sativa (japonica cultivar-group) clone C109...
54
6e-04
52 gb|AF309378.1| Oryza sativa (japonica cultivar-group) clone C121...
54
6e-04
53 gb|AY271619.1| Oryza sativa (indica cultivar-group) tau class GS...
54
6e-04
54 gb|AF479764.1| Triticum aestivum glutathione-S-transferase 28e45...
54
6e-04
55 dbj|AK107092.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
56 dbj|AK103453.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
57 dbj|AK103309.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
58 dbj|AK064620.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
6e-04
59 ref|NM_197499.1| Oryza sativa (japonica cultivar-group) putative...
52
0.002
60 ref|NM_197497.1| Oryza sativa (japonica cultivar-group) putative...
52
0.002
61 gb|AF402800.1| Oryza sativa (japonica cultivar-group) clone RICS...
52
0.002
62 ref|NM_197496.1| Oryza sativa (japonica cultivar-group) putative...
50
0.009
63 ref|NM_197492.1| Oryza sativa (japonica cultivar-group) putative...
50
0.009
64 gb|AY389775.1| Hyacinthus orientalis glutathione-S transferase m...
50
0.009
65 gb|BT009217.1| Triticum aestivum clone wle1n.pk0060.a11:fis, ful...
50
0.009
66 dbj|AK105926.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
67 dbj|AK104213.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
68 dbj|AK102196.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
69 dbj|AK098972.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
70 dbj|AK067361.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
71 dbj|AK064635.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
72 dbj|AK107435.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.034
73 ref|NM_196091.1| Oryza sativa (japonica cultivar-group) putative...
46
0.13
74 ref|NM_192151.1| Oryza sativa (japonica cultivar-group), predic...
46
0.13
75 gb|AY533125.1| Oryza sativa (japonica cultivar-group) glutathion...
46
0.13
76 gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 geno...
46
0.13
77 emb|AJ010450.1|AMY010450 Alopecurus myosuroides mRNA for glutath...
46
0.13
78 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.13
79 dbj|AP003450.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.13
80 dbj|AK105198.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.13
81 ref|NM_197443.1| Oryza sativa (japonica cultivar-group) putative...
44
0.53
82 gb|AC100927.11| Mus musculus chromosome 3, clone RP23-72A21, com...
44
0.53
83 gb|AF402802.1| Oryza sativa (japonica cultivar-group) clone S140...
44
0.53
84 gb|BT009350.1| Triticum aestivum clone wlm96.pk0012.f5:fis, full...
44
0.53
85 emb|AJ414701.1|TAE414701 Triticum aestivum mRNA for glutathione ...
44
0.53
86 gb|AF244701.1|AF244701 Zea mays glutathione S-transferase GST 36...
44
0.53
87 dbj|AK104795.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.53
88 dbj|AK104194.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.53
89 dbj|AK067309.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
0.53
90 ref|NM_106482.1| Arabidopsis thaliana ATGSTU22; glutathione tran...
42
2.1
91 ref|NM_197490.1| Oryza sativa (japonica cultivar-group) putative...
42
2.1
92 ref|XM_752924.1| Ustilago maydis 521 hypothetical protein (UM018...
42
2.1
93 gb|AC124043.2| Homo sapiens chromosome 3 clone RP11-143A18, comp...
42
2.1
94 gb|BT005427.1| Arabidopsis thaliana clone U50423 putative glutat...
42
2.1
95 gb|AF244692.1|AF244692 Zea mays glutathione S-transferase GST 27...
42
2.1
96 gb|AF244688.1|AF244688 Zea mays glutathione S-transferase GST 23...
42
2.1
97 gb|AF244687.1|AF244687 Zea mays glutathione S-transferase GST 22...
42
2.1
98 gb|AY086469.1| Arabidopsis thaliana clone 252874 mRNA, complete ...
42
2.1
99 gb|AC013430.5|AC013430 Genomic sequence for Arabidopsis thaliana...
42
2.1
100 dbj|AK176247.1| Arabidopsis thaliana mRNA for GST7 like protein,...
42
2.1
101 dbj|AK117519.1| Arabidopsis thaliana At1g78340 mRNA for GST7 lik...
42
2.1
102 gb|AY106882.1| Zea mays PCO072967 mRNA sequence
42
2.1
103 gb|AY105389.1| Zea mays PCO061770 mRNA sequence
42
2.1
104 gb|AY104131.1| Zea mays PCO099552 mRNA sequence
42
2.1
105 emb|X85369.1|CIRNAVCPO C.inaequalis mRNA for vanadium chloropero...
42
2.1
106 ref|XM_450661.1| Oryza sativa (japonica cultivar-group), mRNA
40
8.3
107 ref|XM_506655.1| PREDICTED Oryza sativa (japonica cultivar-group...
40
8.3
108 gb|AF309377.1| Oryza sativa (japonica cultivar-group) clone C621...
40
8.3
109 gb|DQ481668.1| Takifugu rubripes HoxDa gene cluster, complete se...
40
8.3
110 ref|XM_756212.1| Ustilago maydis 521 hypothetical protein (UM051...
40
8.3
111 gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
40
8.3
112 gb|AY013754.1| Aegilops tauschii glutathione S-transferase gene,...
40
8.3
113 emb|AL939117.1|SCO939117 Streptomyces coelicolor A3(2) complete ...
40
8.3
114 emb|AL645966.30| Mouse DNA sequence from clone DN-144H19 on chro...
40
8.3
115 gb|AF312365.1|AF312365 Blattella germanica putative BSC1 sodium ...
40
8.3
116 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
117 gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple...
40
8.3
118 gb|AF243365.1|AF243365 Glycine max glutathione S-transferase GST...
40
8.3
119 dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co...
40
8.3
120 gb|AC115857.16| Mus musculus chromosome 5, clone RP24-280I13, co...
40
8.3
121 dbj|AP005422.3| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
122 dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic D...
40
8.3
123 dbj|AK103316.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
8.3
124 dbj|AP003061.3| Homo sapiens genomic DNA, chromosome 11 clone:RP...
40
8.3
125 gb|AY382831.1| Glycine max glutathione S-transferase (GST) mRNA,...
40
8.3
126 gb|AF048978.1|AF048978 Glycine max 2,4-D inducible glutathione S...
40
8.3
127 emb|AL831706.19| Mouse DNA sequence from clone RP23-74B12 on chr...
40
8.3
>gb|AC091680.7 | Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete
sequence
Length = 148611
Score = 99.6 bits (50), Expect = 1e-17
Identities = 155/190 (81%)
Strand = Plus / Minus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||| |||||||||| ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 73608 ccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgcc 73549
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| |||||||| ||||||||| || || || || ||||| |||||| ||||||||
Sbjct: 73548 gaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaag 73489
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|||||||| ||||||||||| ||| ||| || |||||||| | | |||| || |||||
Sbjct: 73488 gtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtac 73429
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 73428 atcgacgagg 73419
Score = 75.8 bits (38), Expect = 2e-10
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||||||||||||||||||||| ||||||||||||||| |||| | ||||||
Sbjct: 129126 tccaacccggtgaacaagaaggtgcccgtcctcatccacaatggcaagccagtctgcgag 129067
Query: 485 tc 486
||
Sbjct: 129066 tc 129065
Score = 75.8 bits (38), Expect = 2e-10
Identities = 152/190 (80%)
Strand = Plus / Minus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 67660 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacgagtacgtc 67601
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| ||||| || |||||||| || || ||||| ||||| |||||| ||||||||
Sbjct: 67600 gaggaggatctcaagaacaagagcgagctgcttctcacctccaacccggtgcacaagaag 67541
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|| ||||| ||||||||||| ||| ||| | |||||||| | | |||| || |||||
Sbjct: 67540 gtacccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcgtgcagtac 67481
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 67480 atcgacgagg 67471
Score = 69.9 bits (35), Expect = 9e-09
Identities = 136/167 (81%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
||||||| |||||| ||| ||||||||||| || || |||||||| ||||||||||
Sbjct: 37454 gcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagt 37395
Query: 410 gaccttcttctagag-tccaatccggtgaacaagaaggtgcccgttctcatccacaatgg 468
|| || || || ||| ||||| |||||| |||||||||||||||| ||||||||||| ||
Sbjct: 37394 gagctgctcct-gagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacgg 37336
Query: 469 cgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
| ||| || |||||||| | |||| |||||||| |||||||||
Sbjct: 37335 caagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgagg 37289
Score = 67.9 bits (34), Expect = 4e-08
Identities = 142/178 (79%)
Strand = Plus / Minus
Query: 338 cgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggacctt 397
||||||| ||| || |||| |||||| ||| |||||||||||||| || ||||||||
Sbjct: 52379 cgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctc 52320
Query: 398 gccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctc 457
||||||||| || || ||||| |||| |||||| |||||||||||||||| |||
Sbjct: 52319 agcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctc 52260
Query: 458 atccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
|||||||| ||| ||| || |||||||| | | |||| || ||||| |||||||||
Sbjct: 52259 atccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgagg 52202
Score = 65.9 bits (33), Expect = 1e-07
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 75932 tccaacccggtgaacaagaaggtgcccgtgctcatccacaa 75892
Score = 65.9 bits (33), Expect = 1e-07
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 67436 cgacccctacgaccgtgccgtcgctcgcttctgggccgcctacat 67392
Score = 61.9 bits (31), Expect = 2e-06
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 32192 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 32133
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| || || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 32132 gcaacaagagcgacctcctcctcgcctccaacccggtgcacaagacggtgcccgtgctca 32073
Query: 459 tccacaa 465
|||||||
Sbjct: 32072 tccacaa 32066
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 73384 cgacccctacgagcgcgccgtcgctcgcttctgggccgcctacat 73340
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 34445 cgacccctacgaccgcgccgtcgctcgcttctgggccgcctacat 34401
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 138427 tccaacccggtacacaagaaggtccccgtgctcatccacaaaggcaagcccatctgcgag 138368
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| || ||||||||||||||||
Sbjct: 138367 tcgcaggtcatcgtgcagtacatcgacgaggt 138336
Score = 56.0 bits (28), Expect = 1e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| ||||||||||||||||||||
Sbjct: 26098 gccgtcgctcgcttctgggccgcctacattga 26067
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgc 588
||||||||| | ||||||| || |||| ||||||||||| |||||||||||
Sbjct: 129013 cctgctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgc 128963
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
||||||||| | |||||||||| | || ||||||||||| ||||||| |||||||
Sbjct: 70623 cctgctccccgccgacccctacgagcgcgccgtcgctcgcttctgggtcgcctac 70569
Score = 54.0 bits (27), Expect = 6e-04
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 30165 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 30106
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| | || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 30105 gcaacaagagcgacctcttgctcgcctccaacccggtgcacaagacggtgcccgtgctca 30046
Query: 459 tccacaa 465
|||||||
Sbjct: 30045 tccacaa 30039
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccac 463
||||| |||||| |||||||||||||||| |||||||||
Sbjct: 10401 tccaacccggtgcacaagaaggtgcccgtgctcatccac 10363
Score = 52.0 bits (26), Expect = 0.002
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||| ||| ||| || | ||||
Sbjct: 4053 tccaacccggtgcacaagaaggtccccgtgctcatccacggcggcaagcccatctccgag 4112
Query: 485 tcactcgccatcttggagtacatcgacgaggtct 518
|| |||| |||| || ||||| ||||||||||||
Sbjct: 4113 tcgctcgtcatcgtgcagtacgtcgacgaggtct 4146
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
||||||| || |||| ||||||||||| |||||||||||||
Sbjct: 75807 cgacccccacgaacgcgccgtcgctcgcttctgggccgcct 75767
Score = 50.1 bits (25), Expect = 0.009
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| |||||||||||||||||
Sbjct: 37238 gccgtcgctcgcttctgggccgcctacat 37210
Score = 50.1 bits (25), Expect = 0.009
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 19607 cgacccctacgaacgcgccgtcgctcgcttctgggtctcctacat 19563
Score = 50.1 bits (25), Expect = 0.009
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
|||||||| || || ||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 7013 gcgctcaagttgaagggcgtgagctacgagtacatcgaggaggacctcgccaacaagagc 7072
Query: 410 gaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatcca 462
|| || || || ||||| |||||| |||||||| | ||||| ||||||||
Sbjct: 7073 gagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 7125
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| |||||||| |||||||||||
Sbjct: 138286 gccgtcgctcgcttctgggctgcctacattga 138255
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 7219 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 7261
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 4175 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 4217
Score = 44.1 bits (22), Expect = 0.53
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgccta 591
||||||| || |||| ||||||||||| |||||| |||||||
Sbjct: 31981 cgacccccacgaacgcgccgtcgctcgcttctggaccgccta 31940
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||||| | ||||| |||||||||||
Sbjct: 70742 tccaacccggtgcacaagaagatccccgtgctcatccacaa 70702
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||| |||||| || |||||||||||
Sbjct: 34570 tccaacccggtgcacaagacggtgccggtgctcatccacaa 34530
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
|||| |||||| |||||||||||||||||
Sbjct: 23316 gccgccgctcgcttctgggccgcctacat 23288
>gb|AC113948.5 | Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete
sequence
Length = 132900
Score = 99.6 bits (50), Expect = 1e-17
Identities = 155/190 (81%)
Strand = Plus / Minus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||| |||||||||| ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 131909 ccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgcc 131850
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| |||||||| ||||||||| || || || || ||||| |||||| ||||||||
Sbjct: 131849 gaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaag 131790
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|||||||| ||||||||||| ||| ||| || |||||||| | | |||| || |||||
Sbjct: 131789 gtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtac 131730
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 131729 atcgacgagg 131720
Score = 75.8 bits (38), Expect = 2e-10
Identities = 152/190 (80%)
Strand = Plus / Minus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 125961 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacgagtacgtc 125902
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| ||||| || |||||||| || || ||||| ||||| |||||| ||||||||
Sbjct: 125901 gaggaggatctcaagaacaagagcgagctgcttctcacctccaacccggtgcacaagaag 125842
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|| ||||| ||||||||||| ||| ||| | |||||||| | | |||| || |||||
Sbjct: 125841 gtacccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcgtgcagtac 125782
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 125781 atcgacgagg 125772
Score = 69.9 bits (35), Expect = 9e-09
Identities = 136/167 (81%), Gaps = 2/167 (1%)
Strand = Plus / Minus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
||||||| |||||| ||| ||||||||||| || || |||||||| ||||||||||
Sbjct: 95755 gcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagt 95696
Query: 410 gaccttcttctagag-tccaatccggtgaacaagaaggtgcccgttctcatccacaatgg 468
|| || || || ||| ||||| |||||| |||||||||||||||| ||||||||||| ||
Sbjct: 95695 gagctgctcct-gagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacgg 95637
Query: 469 cgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
| ||| || |||||||| | |||| |||||||| |||||||||
Sbjct: 95636 caagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgagg 95590
Score = 67.9 bits (34), Expect = 4e-08
Identities = 142/178 (79%)
Strand = Plus / Minus
Query: 338 cgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggacctt 397
||||||| ||| || |||| |||||| ||| |||||||||||||| || ||||||||
Sbjct: 110680 cgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctc 110621
Query: 398 gccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctc 457
||||||||| || || ||||| |||| |||||| |||||||||||||||| |||
Sbjct: 110620 agcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctc 110561
Query: 458 atccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
|||||||| ||| ||| || |||||||| | | |||| || ||||| |||||||||
Sbjct: 110560 atccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgagg 110503
Score = 65.9 bits (33), Expect = 1e-07
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 125737 cgacccctacgaccgtgccgtcgctcgcttctgggccgcctacat 125693
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 539 ctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
|||||||| | |||||||||||| || ||||||||||| |||||||||||||
Sbjct: 56275 ctgctccccgccgacccctaccaccgcgccgtcgctcgcttctgggccgcct 56224
Score = 61.9 bits (31), Expect = 2e-06
Identities = 103/127 (81%)
Strand = Plus / Minus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 90493 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 90434
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| || || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 90433 gcaacaagagcgacctcctcctcgcctccaacccggtgcacaagacggtgcccgtgctca 90374
Query: 459 tccacaa 465
|||||||
Sbjct: 90373 tccacaa 90367
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 131685 cgacccctacgagcgcgccgtcgctcgcttctgggccgcctacat 131641
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 92746 cgacccctacgaccgcgccgtcgctcgcttctgggccgcctacat 92702
Score = 56.0 bits (28), Expect = 1e-04
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| ||||||||||||||||||||
Sbjct: 84399 gccgtcgctcgcttctgggccgcctacattga 84368
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Minus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
||||||||| | |||||||||| | || ||||||||||| ||||||| |||||||
Sbjct: 128924 cctgctccccgccgacccctacgagcgcgccgtcgctcgcttctgggtcgcctac 128870
Score = 54.0 bits (27), Expect = 6e-04
Identities = 102/127 (80%)
Strand = Plus / Minus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 88466 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 88407
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| | || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 88406 gcaacaagagcgacctcttgctcgcctccaacccggtgcacaagacggtgcccgtgctca 88347
Query: 459 tccacaa 465
|||||||
Sbjct: 88346 tccacaa 88340
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccac 463
||||| |||||| |||||||||||||||| |||||||||
Sbjct: 68702 tccaacccggtgcacaagaaggtgcccgtgctcatccac 68664
Score = 52.0 bits (26), Expect = 0.002
Identities = 77/94 (81%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||| ||| ||| || | ||||
Sbjct: 62354 tccaacccggtgcacaagaaggtccccgtgctcatccacggcggcaagcccatctccgag 62413
Query: 485 tcactcgccatcttggagtacatcgacgaggtct 518
|| |||| |||| || ||||| ||||||||||||
Sbjct: 62414 tcgctcgtcatcgtgcagtacgtcgacgaggtct 62447
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Minus
Query: 352 gctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagtga 411
||||||| |||| ||| |||||||||||||| || ||||| || |||||||| ||
Sbjct: 54434 gctcaacctcaagggcctgagctacgagtacgtcgaggaggatctcatgaacaagagcga 54375
Query: 412 ccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||| || || | ||||| |||||| |||||||||| ||||| |||||||||||
Sbjct: 54374 cctcctcctcggctccaacccggtgcacaagaaggtccccgtgctcatccacaa 54321
Score = 50.1 bits (25), Expect = 0.009
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| |||||||||||||||||
Sbjct: 95539 gccgtcgctcgcttctgggccgcctacat 95511
Score = 50.1 bits (25), Expect = 0.009
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 77908 cgacccctacgaacgcgccgtcgctcgcttctgggtctcctacat 77864
Score = 50.1 bits (25), Expect = 0.009
Identities = 91/113 (80%)
Strand = Plus / Plus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
|||||||| || || ||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 65314 gcgctcaagttgaagggcgtgagctacgagtacatcgaggaggacctcgccaacaagagc 65373
Query: 410 gaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatcca 462
|| || || || ||||| |||||| |||||||| | ||||| ||||||||
Sbjct: 65374 gagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 65426
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 65520 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 65562
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 62476 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 62518
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 54221 cgacccctacgagcgcgccgtcgcccgcttctgggccgcctac 54179
Score = 44.1 bits (22), Expect = 0.53
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgccta 591
||||||| || |||| ||||||||||| |||||| |||||||
Sbjct: 90282 cgacccccacgaacgcgccgtcgctcgcttctggaccgccta 90241
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||||| | ||||| |||||||||||
Sbjct: 129043 tccaacccggtgcacaagaagatccccgtgctcatccacaa 129003
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||| |||||| || |||||||||||
Sbjct: 92871 tccaacccggtgcacaagacggtgccggtgctcatccacaa 92831
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
|||| |||||| |||||||||||||||||
Sbjct: 81617 gccgccgctcgcttctgggccgcctacat 81589
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 99.6 bits (50), Expect = 1e-17
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||| |||||||||| ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 20034582 ccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgcc 20034641
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| |||||||| ||||||||| || || || || ||||| |||||| ||||||||
Sbjct: 20034642 gaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaag 20034701
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|||||||| ||||||||||| ||| ||| || |||||||| | | |||| || |||||
Sbjct: 20034702 gtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtac 20034761
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 20034762 atcgacgagg 20034771
Score = 75.8 bits (38), Expect = 2e-10
Identities = 152/190 (80%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 20040530 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacgagtacgtc 20040589
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| ||||| || |||||||| || || ||||| ||||| |||||| ||||||||
Sbjct: 20040590 gaggaggatctcaagaacaagagcgagctgcttctcacctccaacccggtgcacaagaag 20040649
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|| ||||| ||||||||||| ||| ||| | |||||||| | | |||| || |||||
Sbjct: 20040650 gtacccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcgtgcagtac 20040709
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 20040710 atcgacgagg 20040719
Score = 75.8 bits (38), Expect = 2e-10
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||||||||||||||||||||| ||||||||||||||| |||| | ||||||
Sbjct: 19979064 tccaacccggtgaacaagaaggtgcccgtcctcatccacaatggcaagccagtctgcgag 19979123
Query: 485 tc 486
||
Sbjct: 19979124 tc 19979125
Score = 69.9 bits (35), Expect = 9e-09
Identities = 136/167 (81%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
||||||| |||||| ||| ||||||||||| || || |||||||| ||||||||||
Sbjct: 20070736 gcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagt 20070795
Query: 410 gaccttcttctagag-tccaatccggtgaacaagaaggtgcccgttctcatccacaatgg 468
|| || || || ||| ||||| |||||| |||||||||||||||| ||||||||||| ||
Sbjct: 20070796 gagctgctcct-gagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacgg 20070854
Query: 469 cgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
| ||| || |||||||| | |||| |||||||| |||||||||
Sbjct: 20070855 caagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgagg 20070901
Score = 67.9 bits (34), Expect = 4e-08
Identities = 142/178 (79%)
Strand = Plus / Plus
Query: 338 cgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggacctt 397
||||||| ||| || |||| |||||| ||| |||||||||||||| || ||||||||
Sbjct: 20055811 cgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctc 20055870
Query: 398 gccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctc 457
||||||||| || || ||||| |||| |||||| |||||||||||||||| |||
Sbjct: 20055871 agcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctc 20055930
Query: 458 atccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
|||||||| ||| ||| || |||||||| | | |||| || ||||| |||||||||
Sbjct: 20055931 atccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgagg 20055988
Score = 65.9 bits (33), Expect = 1e-07
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 20040754 cgacccctacgaccgtgccgtcgctcgcttctgggccgcctacat 20040798
Score = 65.9 bits (33), Expect = 1e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 20032258 tccaacccggtgaacaagaaggtgcccgtgctcatccacaa 20032298
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 539 ctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
|||||||| | |||||||||||| || ||||||||||| |||||||||||||
Sbjct: 20110216 ctgctccccgccgacccctaccaccgcgccgtcgctcgcttctgggccgcct 20110267
Score = 61.9 bits (31), Expect = 2e-06
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 20075998 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 20076057
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| || || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 20076058 gcaacaagagcgacctcctcctcgcctccaacccggtgcacaagacggtgcccgtgctca 20076117
Query: 459 tccacaa 465
|||||||
Sbjct: 20076118 tccacaa 20076124
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 20073745 cgacccctacgaccgcgccgtcgctcgcttctgggccgcctacat 20073789
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 20034806 cgacccctacgagcgcgccgtcgctcgcttctgggccgcctacat 20034850
Score = 58.0 bits (29), Expect = 4e-05
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacga 378
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||
Sbjct: 19918794 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacga 19918846
Score = 56.0 bits (28), Expect = 1e-04
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| ||||||||||||||||||||
Sbjct: 20082092 gccgtcgctcgcttctgggccgcctacattga 20082123
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 19969763 tccaacccggtacacaagaaggtccccgtgctcatccacaaaggcaagcccatctgcgag 19969822
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| || ||||||||||||||||
Sbjct: 19969823 tcgcaggtcatcgtgcagtacatcgacgaggt 19969854
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 19918893 tccaacccggtgcacaagaaggttcccgtgctcatccacaacggcaagcccatctgcgag 19918952
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| | ||||||||||||||||
Sbjct: 19918953 tcgcaggtcatcgtacagtacatcgacgaggt 19918984
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccac 463
||||| |||||| |||||||||||||||| |||||||||
Sbjct: 20097789 tccaacccggtgcacaagaaggtgcccgtgctcatccac 20097827
Score = 54.0 bits (27), Expect = 6e-04
Identities = 102/127 (80%)
Strand = Plus / Plus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 20078025 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 20078084
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| | || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 20078085 gcaacaagagcgacctcttgctcgcctccaacccggtgcacaagacggtgcccgtgctca 20078144
Query: 459 tccacaa 465
|||||||
Sbjct: 20078145 tccacaa 20078151
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
||||||||| | |||||||||| | || ||||||||||| ||||||| |||||||
Sbjct: 20037567 cctgctccccgccgacccctacgagcgcgccgtcgctcgcttctgggtcgcctac 20037621
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgc 588
||||||||| | ||||||| || |||| ||||||||||| |||||||||||
Sbjct: 19979177 cctgctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgc 19979227
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 352 gctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagtga 411
||||||| |||| ||| |||||||||||||| || ||||| || |||||||| ||
Sbjct: 20112057 gctcaacctcaagggcctgagctacgagtacgtcgaggaggatctcatgaacaagagcga 20112116
Query: 412 ccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||| || || | ||||| |||||| |||||||||| ||||| |||||||||||
Sbjct: 20112117 cctcctcctcggctccaacccggtgcacaagaaggtccccgtgctcatccacaa 20112170
Score = 52.0 bits (26), Expect = 0.002
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||| ||| ||| || | ||||
Sbjct: 20104137 tccaacccggtgcacaagaaggtccccgtgctcatccacggcggcaagcccatctccgag 20104078
Query: 485 tcactcgccatcttggagtacatcgacgaggtct 518
|| |||| |||| || ||||| ||||||||||||
Sbjct: 20104077 tcgctcgtcatcgtgcagtacgtcgacgaggtct 20104044
Score = 50.1 bits (25), Expect = 0.009
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
|||||||| || || ||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 20101177 gcgctcaagttgaagggcgtgagctacgagtacatcgaggaggacctcgccaacaagagc 20101118
Query: 410 gaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatcca 462
|| || || || ||||| |||||| |||||||| | ||||| ||||||||
Sbjct: 20101117 gagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 20101065
Score = 50.1 bits (25), Expect = 0.009
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 20088583 cgacccctacgaacgcgccgtcgctcgcttctgggtctcctacat 20088627
Score = 50.1 bits (25), Expect = 0.009
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| |||||||||||||||||
Sbjct: 20070952 gccgtcgctcgcttctgggccgcctacat 20070980
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
||||||| || |||| ||||||||||| |||||||||||||
Sbjct: 20032383 cgacccccacgaacgcgccgtcgctcgcttctgggccgcct 20032423
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| |||||||| |||||||||||
Sbjct: 19969904 gccgtcgctcgcttctgggctgcctacattga 19969935
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20112270 cgacccctacgagcgcgccgtcgcccgcttctgggccgcctac 20112312
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20104015 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 20103973
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20100971 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 20100929
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 431 ccggtgaacaagaaggtgcccgttctcatccacaa 465
|||||| |||||||||| ||||| |||||||||||
Sbjct: 11022022 ccggtgcacaagaaggtccccgtgctcatccacaa 11022056
Score = 44.1 bits (22), Expect = 0.53
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgccta 591
||||||| || |||| ||||||||||| |||||| |||||||
Sbjct: 20076209 cgacccccacgaacgcgccgtcgctcgcttctggaccgccta 20076250
Score = 44.1 bits (22), Expect = 0.53
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 481 cgagtcactcgccatcttggagtacatcgacgaggtct 518
|||||| |||| |||| | |||||||||||||||||||
Sbjct: 19913717 cgagtctctcgtcatcgtcgagtacatcgacgaggtct 19913680
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
|||| |||||| |||||||||||||||||
Sbjct: 20084874 gccgccgctcgcttctgggccgcctacat 20084902
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||| |||||| || |||||||||||
Sbjct: 20073620 tccaacccggtgcacaagacggtgccggtgctcatccacaa 20073660
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||||| | ||||| |||||||||||
Sbjct: 20037448 tccaacccggtgcacaagaagatccccgtgctcatccacaa 20037488
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| ||||||||| |||||||
Sbjct: 19919034 gccgtcgctcgcttctgggcctcctacat 19919062
>gb|AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 99.6 bits (50), Expect = 1e-17
Identities = 155/190 (81%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||| |||||||||| ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 20045858 ccgttcgctctgcgagtgaagcttgcgctcagcttcaagggcctgagctacgagtacgcc 20045917
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| |||||||| ||||||||| || || || || ||||| |||||| ||||||||
Sbjct: 20045918 gaggaggacctcagcaacaagagcgagctgctgctcagctccaacccggtgcacaagaag 20045977
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|||||||| ||||||||||| ||| ||| || |||||||| | | |||| || |||||
Sbjct: 20045978 gtgcccgtgctcatccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtac 20046037
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 20046038 atcgacgagg 20046047
Score = 75.8 bits (38), Expect = 2e-10
Identities = 152/190 (80%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccag 385
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||||||
Sbjct: 20051806 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacgagtacgtc 20051865
Query: 386 gaagaggaccttgccaacaagagtgaccttcttctagagtccaatccggtgaacaagaag 445
|| ||||| || |||||||| || || ||||| ||||| |||||| ||||||||
Sbjct: 20051866 gaggaggatctcaagaacaagagcgagctgcttctcacctccaacccggtgcacaagaag 20051925
Query: 446 gtgcccgttctcatccacaatggcgtgccaatttgcgagtcactcgccatcttggagtac 505
|| ||||| ||||||||||| ||| ||| | |||||||| | | |||| || |||||
Sbjct: 20051926 gtacccgtgctcatccacaacggcaagcccgtctgcgagtcgcaggtcatcgtgcagtac 20051985
Query: 506 atcgacgagg 515
||||||||||
Sbjct: 20051986 atcgacgagg 20051995
Score = 75.8 bits (38), Expect = 2e-10
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||||||||||||||||||||| ||||||||||||||| |||| | ||||||
Sbjct: 19990340 tccaacccggtgaacaagaaggtgcccgtcctcatccacaatggcaagccagtctgcgag 19990399
Query: 485 tc 486
||
Sbjct: 19990400 tc 19990401
Score = 69.9 bits (35), Expect = 9e-09
Identities = 136/167 (81%), Gaps = 2/167 (1%)
Strand = Plus / Plus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
||||||| |||||| ||| ||||||||||| || || |||||||| ||||||||||
Sbjct: 20082012 gcgctcagcttcaagggcctgagctacgagaacgtcgaggaggacctccacaacaagagt 20082071
Query: 410 gaccttcttctagag-tccaatccggtgaacaagaaggtgcccgttctcatccacaatgg 468
|| || || || ||| ||||| |||||| |||||||||||||||| ||||||||||| ||
Sbjct: 20082072 gagctgctcct-gagctccaacccggtgcacaagaaggtgcccgtgctcatccacaacgg 20082130
Query: 469 cgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
| ||| || |||||||| | |||| |||||||| |||||||||
Sbjct: 20082131 caagcccatctgcgagtcgcagatcatcgtggagtacgtcgacgagg 20082177
Score = 67.9 bits (34), Expect = 4e-08
Identities = 142/178 (79%)
Strand = Plus / Plus
Query: 338 cgagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggacctt 397
||||||| ||| || |||| |||||| ||| |||||||||||||| || ||||||||
Sbjct: 20067087 cgagtgaagcttgcactcagcttcaagggcctgagctacgagtacgtcgaggaggacctc 20067146
Query: 398 gccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctc 457
||||||||| || || ||||| |||| |||||| |||||||||||||||| |||
Sbjct: 20067147 agcaacaagagcgagctgcttctcagcaccaacccggtgcacaagaaggtgcccgtgctc 20067206
Query: 458 atccacaatggcgtgccaatttgcgagtcactcgccatcttggagtacatcgacgagg 515
|||||||| ||| ||| || |||||||| | | |||| || ||||| |||||||||
Sbjct: 20067207 atccacaacggcaagcccatctgcgagtcgcaggtcatcgtgcagtacctcgacgagg 20067264
Score = 65.9 bits (33), Expect = 1e-07
Identities = 42/45 (93%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | |||||||||||||| |||||||||||||||||
Sbjct: 20052030 cgacccctacgaccgtgccgtcgctcgcttctgggccgcctacat 20052074
Score = 65.9 bits (33), Expect = 1e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 20043534 tccaacccggtgaacaagaaggtgcccgtgctcatccacaa 20043574
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 539 ctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
|||||||| | |||||||||||| || ||||||||||| |||||||||||||
Sbjct: 20121492 ctgctccccgccgacccctaccaccgcgccgtcgctcgcttctgggccgcct 20121543
Score = 61.9 bits (31), Expect = 2e-06
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 20087274 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 20087333
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| || || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 20087334 gcaacaagagcgacctcctcctcgcctccaacccggtgcacaagacggtgcccgtgctca 20087393
Query: 459 tccacaa 465
|||||||
Sbjct: 20087394 tccacaa 20087400
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 20085021 cgacccctacgaccgcgccgtcgctcgcttctgggccgcctacat 20085065
Score = 58.0 bits (29), Expect = 4e-05
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| | || ||||||||||| |||||||||||||||||
Sbjct: 20046082 cgacccctacgagcgcgccgtcgctcgcttctgggccgcctacat 20046126
Score = 58.0 bits (29), Expect = 4e-05
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacga 378
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||
Sbjct: 19930070 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacga 19930122
Score = 56.0 bits (28), Expect = 1e-04
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| ||||||||||||||||||||
Sbjct: 20093368 gccgtcgctcgcttctgggccgcctacattga 20093399
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 19981039 tccaacccggtacacaagaaggtccccgtgctcatccacaaaggcaagcccatctgcgag 19981098
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| || ||||||||||||||||
Sbjct: 19981099 tcgcaggtcatcgtgcagtacatcgacgaggt 19981130
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 19930169 tccaacccggtgcacaagaaggttcccgtgctcatccacaacggcaagcccatctgcgag 19930228
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| | ||||||||||||||||
Sbjct: 19930229 tcgcaggtcatcgtacagtacatcgacgaggt 19930260
Score = 54.0 bits (27), Expect = 6e-04
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccac 463
||||| |||||| |||||||||||||||| |||||||||
Sbjct: 20109065 tccaacccggtgcacaagaaggtgcccgtgctcatccac 20109103
Score = 54.0 bits (27), Expect = 6e-04
Identities = 102/127 (80%)
Strand = Plus / Plus
Query: 339 gagtgaggctagcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttg 398
|||||| ||| |||||| || |||| ||| |||||||||||||| || ||||| ||
Sbjct: 20089301 gagtgaagctcgcgctccacctcaagggcgtgagctacgagtacgtcgaggaggatctcc 20089360
Query: 399 ccaacaagagtgaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctca 458
||||||||| ||||| | || | ||||| |||||| |||||| ||||||||| ||||
Sbjct: 20089361 gcaacaagagcgacctcttgctcgcctccaacccggtgcacaagacggtgcccgtgctca 20089420
Query: 459 tccacaa 465
|||||||
Sbjct: 20089421 tccacaa 20089427
Score = 54.0 bits (27), Expect = 6e-04
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
||||||||| | |||||||||| | || ||||||||||| ||||||| |||||||
Sbjct: 20048843 cctgctccccgccgacccctacgagcgcgccgtcgctcgcttctgggtcgcctac 20048897
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgc 588
||||||||| | ||||||| || |||| ||||||||||| |||||||||||
Sbjct: 19990453 cctgctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgc 19990503
Score = 52.0 bits (26), Expect = 0.002
Identities = 92/114 (80%)
Strand = Plus / Plus
Query: 352 gctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagtga 411
||||||| |||| ||| |||||||||||||| || ||||| || |||||||| ||
Sbjct: 20123333 gctcaacctcaagggcctgagctacgagtacgtcgaggaggatctcatgaacaagagcga 20123392
Query: 412 ccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||| || || | ||||| |||||| |||||||||| ||||| |||||||||||
Sbjct: 20123393 cctcctcctcggctccaacccggtgcacaagaaggtccccgtgctcatccacaa 20123446
Score = 52.0 bits (26), Expect = 0.002
Identities = 77/94 (81%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||| ||| ||| || | ||||
Sbjct: 20115413 tccaacccggtgcacaagaaggtccccgtgctcatccacggcggcaagcccatctccgag 20115354
Query: 485 tcactcgccatcttggagtacatcgacgaggtct 518
|| |||| |||| || ||||| ||||||||||||
Sbjct: 20115353 tcgctcgtcatcgtgcagtacgtcgacgaggtct 20115320
Score = 50.1 bits (25), Expect = 0.009
Identities = 91/113 (80%)
Strand = Plus / Minus
Query: 350 gcgctcaacttcaaaggcttgagctacgagtaccaggaagaggaccttgccaacaagagt 409
|||||||| || || ||| |||||||||||||| || |||||||| |||||||||||
Sbjct: 20112453 gcgctcaagttgaagggcgtgagctacgagtacatcgaggaggacctcgccaacaagagc 20112394
Query: 410 gaccttcttctagagtccaatccggtgaacaagaaggtgcccgttctcatcca 462
|| || || || ||||| |||||| |||||||| | ||||| ||||||||
Sbjct: 20112393 gagctcctcctcagctccaacccggtgcacaagaagatccccgtcctcatcca 20112341
Score = 50.1 bits (25), Expect = 0.009
Identities = 40/45 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctacat 594
|||||||||| |||| ||||||||||| ||||||| | |||||||
Sbjct: 20099859 cgacccctacgaacgcgccgtcgctcgcttctgggtctcctacat 20099903
Score = 50.1 bits (25), Expect = 0.009
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| |||||||||||||||||
Sbjct: 20082228 gccgtcgctcgcttctgggccgcctacat 20082256
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcct 590
||||||| || |||| ||||||||||| |||||||||||||
Sbjct: 20043659 cgacccccacgaacgcgccgtcgctcgcttctgggccgcct 20043699
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| |||||||| |||||||||||
Sbjct: 19981180 gccgtcgctcgcttctgggctgcctacattga 19981211
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20123546 cgacccctacgagcgcgccgtcgcccgcttctgggccgcctac 20123588
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20115291 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 20115249
Score = 46.1 bits (23), Expect = 0.13
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgcctac 592
|||||||||| | || |||||||| || |||||||||||||||
Sbjct: 20112247 cgacccctacgaccgcgccgtcgcccgcttctgggccgcctac 20112205
Score = 46.1 bits (23), Expect = 0.13
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 431 ccggtgaacaagaaggtgcccgttctcatccacaa 465
|||||| |||||||||| ||||| |||||||||||
Sbjct: 11028462 ccggtgcacaagaaggtccccgtgctcatccacaa 11028496
Score = 44.1 bits (22), Expect = 0.53
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 550 cgacccctaccaacgtgccgtcgctcggttctgggccgccta 591
||||||| || |||| ||||||||||| |||||| |||||||
Sbjct: 20087485 cgacccccacgaacgcgccgtcgctcgcttctggaccgccta 20087526
Score = 44.1 bits (22), Expect = 0.53
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 481 cgagtcactcgccatcttggagtacatcgacgaggtct 518
|||||| |||| |||| | |||||||||||||||||||
Sbjct: 19924993 cgagtctctcgtcatcgtcgagtacatcgacgaggtct 19924956
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
|||| |||||| |||||||||||||||||
Sbjct: 20096150 gccgccgctcgcttctgggccgcctacat 20096178
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||| |||||| || |||||||||||
Sbjct: 20084896 tccaacccggtgcacaagacggtgccggtgctcatccacaa 20084936
Score = 42.1 bits (21), Expect = 2.1
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaa 465
||||| |||||| |||||||| | ||||| |||||||||||
Sbjct: 20048724 tccaacccggtgcacaagaagatccccgtgctcatccacaa 20048764
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| ||||||||| |||||||
Sbjct: 19930310 gccgtcgctcgcttctgggcctcctacat 19930338
>gb|AC074232.11 | Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence,
complete sequence
Length = 116932
Score = 75.8 bits (38), Expect = 2e-10
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||||||||||||||||||||| ||||||||||||||| |||| | ||||||
Sbjct: 6979 tccaacccggtgaacaagaaggtgcccgtcctcatccacaatggcaagccagtctgcgag 6920
Query: 485 tc 486
||
Sbjct: 6919 tc 6918
Score = 58.0 bits (29), Expect = 4e-05
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 326 ccgttcgcgctgcgagtgaggctagcgctcaacttcaaaggcttgagctacga 378
|||||||||||||||| || ||| ||||||| |||||| ||| ||||||||||
Sbjct: 67249 ccgttcgcgctgcgagcgaagctcgcgctcagcttcaagggcctgagctacga 67197
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| |||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 67150 tccaacccggtgcacaagaaggttcccgtgctcatccacaacggcaagcccatctgcgag 67091
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| | ||||||||||||||||
Sbjct: 67090 tcgcaggtcatcgtacagtacatcgacgaggt 67059
Score = 56.0 bits (28), Expect = 1e-04
Identities = 76/92 (82%)
Strand = Plus / Minus
Query: 425 tccaatccggtgaacaagaaggtgcccgttctcatccacaatggcgtgccaatttgcgag 484
||||| ||||| |||||||||| ||||| ||||||||||| ||| ||| || ||||||
Sbjct: 16280 tccaacccggtacacaagaaggtccccgtgctcatccacaaaggcaagcccatctgcgag 16221
Query: 485 tcactcgccatcttggagtacatcgacgaggt 516
|| | | |||| || ||||||||||||||||
Sbjct: 16220 tcgcaggtcatcgtgcagtacatcgacgaggt 16189
Score = 54.0 bits (27), Expect = 6e-04
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 538 cctgctccctggcgacccctaccaacgtgccgtcgctcggttctgggccgc 588
||||||||| | ||||||| || |||| ||||||||||| |||||||||||
Sbjct: 6866 cctgctccccgccgacccccacgaacgcgccgtcgctcgcttctgggccgc 6816
Score = 48.1 bits (24), Expect = 0.034
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacattga 597
||||||||||| |||||||| |||||||||||
Sbjct: 16139 gccgtcgctcgcttctgggctgcctacattga 16108
Score = 44.1 bits (22), Expect = 0.53
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 481 cgagtcactcgccatcttggagtacatcgacgaggtct 518
|||||| |||| |||| | |||||||||||||||||||
Sbjct: 72326 cgagtctctcgtcatcgtcgagtacatcgacgaggtct 72363
Score = 42.1 bits (21), Expect = 2.1
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 566 gccgtcgctcggttctgggccgcctacat 594
||||||||||| ||||||||| |||||||
Sbjct: 67009 gccgtcgctcgcttctgggcctcctacat 66981
>emb|AL645966.30 | Mouse DNA sequence from clone DN-144H19 on chromosome 3 Contains the 3'
end of the Il21 gene for interleukin 21, a novel
pseudogene (D530049N12RIK), a novel gene (C030047M16RIK),
the Il2 gene for interleukin 2, the Tenr gene for testis
nuclear RNA binding protein, a NADH dehydrogenase subunit
5 (ND5) pseudogene and a putative S1 RNA binding domain
protein (PS1D) (2810055E05RIK) pseudogene, complete
sequence
Length = 161393
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 263 gaggaagaagtggcaggagg 282
||||||||||||||||||||
Sbjct: 21952 gaggaagaagtggcaggagg 21971
>emb|AL831706.19 | Mouse DNA sequence from clone RP23-74B12 on chromosome 2, complete
sequence
Length = 193178
Score = 40.1 bits (20), Expect = 8.3
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 392 gaccttgccaacaagagtga 411
||||||||||||||||||||
Sbjct: 122660 gaccttgccaacaagagtga 122641
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,398,951
Number of Sequences: 3902068
Number of extensions: 3398951
Number of successful extensions: 55694
Number of sequences better than 10.0: 128
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 54886
Number of HSP's gapped (non-prelim): 773
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)