ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdn12 |
|---|---|
| Clone Library Name | barley_pub |
>UBLH2_SCHPO (Q9UUB6) Ubiquitin carboxyl-terminal hydrolase 2 (EC 3.1.2.15)| Length = 300 Score = 108 bits (270), Expect = 9e-24 Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 2/117 (1%) Frame = +3 Query: 180 MSWAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPP-EKD 356 MSW IE+D GVFT+ VDELYSLD+D+L IYG+I L+KW +K Sbjct: 1 MSWTTIESDAGVFTDLIENLGVKDVEVDELYSLDVDSLRQFPDIYGIIFLFKWNSKVDKP 60 Query: 357 ERPVIKDAVPNVFFANQIINSACATQAIVSVLLN-SSGITLSEDLKKLKEFAKDMPP 524 + + D++ N+FFA Q+IN+ACATQA++SVLLN S I L L + K+F+K +PP Sbjct: 61 DGTMDYDSMDNIFFAKQVINNACATQALLSVLLNHSDEIDLGTTLSEFKDFSKTLPP 117
>UCHL5_MOUSE (Q9WUP7) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 100 bits (248), Expect = 3e-21 Identities = 50/112 (44%), Positives = 76/112 (67%), Gaps = 3/112 (2%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEKDERP 365 W +E+DPGVFTE V+E++SL+ ++ L+P++GLI L+KW+P E+ Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPESFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 366 VIKDA-VPNVFFANQIINSACATQAIVSVLLNSS--GITLSEDLKKLKEFAK 512 V++D+ + +FFA Q+IN+ACATQAIVSVLLN + + L E L + KEF++ Sbjct: 68 VVQDSRLETIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQ 119
>UCHL5_BOVIN (Q9XSJ0) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 328 Score = 99.0 bits (245), Expect = 7e-21 Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEKDERP 365 W +E+DPGVFTE V+E++SL+ + L+P++GLI L+KW+P E+ Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 366 VIKDA-VPNVFFANQIINSACATQAIVSVLLNSS--GITLSEDLKKLKEFAK 512 V++D+ + +FFA Q+IN+ACATQAIVSVLLN + + L E L + KEF++ Sbjct: 68 VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQ 119
>UCHL5_HUMAN (Q9Y5K5) Ubiquitin carboxyl-terminal hydrolase isozyme L5 (EC| 3.4.19.12) (UCH-L5) (Ubiquitin thioesterase L5) (Ubiquitin C-terminal hydrolase UCH37) Length = 329 Score = 99.0 bits (245), Expect = 7e-21 Identities = 50/112 (44%), Positives = 75/112 (66%), Gaps = 3/112 (2%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEKDERP 365 W +E+DPGVFTE V+E++SL+ + L+P++GLI L+KW+P E+ Sbjct: 8 WCLMESDPGVFTELIKGFGCRGAQVEEIWSLEPENFEKLKPVHGLIFLFKWQPGEEPAGS 67 Query: 366 VIKDA-VPNVFFANQIINSACATQAIVSVLLNSS--GITLSEDLKKLKEFAK 512 V++D+ + +FFA Q+IN+ACATQAIVSVLLN + + L E L + KEF++ Sbjct: 68 VVQDSRLDTIFFAKQVINNACATQAIVSVLLNCTHQDVHLGETLSEFKEFSQ 119
>UBH4_CAEEL (Q09444) Probable ubiquitin carboxyl-terminal hydrolase ubh-4 (EC| 3.4.19.12) (Ubiquitin C-terminal hydrolase family 1 member 4) (Ubiquitin thioesterase 4) Length = 321 Score = 92.4 bits (228), Expect = 7e-19 Identities = 53/116 (45%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Frame = +3 Query: 183 SWAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEKDER 362 SW IE+DPGVFTE V+ELYSLD D +P YGLI L+KWR + DE Sbjct: 6 SWCLIESDPGVFTEMLRGFGVDGLQVEELYSLDDDKAMT-RPTYGLIFLFKWR--QGDET 62 Query: 363 PVIKDAVPNVFFANQIINSACATQAIVSVLLN--SSGITLSEDLKKLKEFAKDMPP 524 I N+FFA+Q I +ACATQA++++L+N + + L L + KEFA D+ P Sbjct: 63 TGIPSDKQNIFFAHQTIQNACATQALINLLMNVEDTDVKLGNILNQYKEFAIDLDP 118
>BAP1_MOUSE (Q99PU7) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Ubiquitin C-terminal hydrolase X4) (UCH-X4) Length = 728 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 10/127 (7%) Frame = +3 Query: 174 VDMSWAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEK 353 ++ W +E+DPG+FT V+E+Y L P+YG I L+KW + Sbjct: 1 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERR 57 Query: 354 DERPVIK----------DAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKE 503 R V D V N+FFA+Q+I ++CAT A++SVLLN S + L L ++K+ Sbjct: 58 SRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKD 117 Query: 504 FAKDMPP 524 F K P Sbjct: 118 FTKGFSP 124
>BAP1_HUMAN (Q92560) Ubiquitin carboxyl-terminal hydrolase BAP1 (EC 3.4.19.12)| (BRCA1-associated protein 1) (Cerebral protein 6) Length = 729 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 10/127 (7%) Frame = +3 Query: 174 VDMSWAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYKWRPPEK 353 ++ W +E+DPG+FT V+E+Y L P+YG I L+KW + Sbjct: 1 MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQG---PVYGFIFLFKWIEERR 57 Query: 354 DERPVIK----------DAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKE 503 R V D V N+FFA+Q+I ++CAT A++SVLLN S + L L ++K+ Sbjct: 58 SRRKVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSSVDLGPTLSRMKD 117 Query: 504 FAKDMPP 524 F K P Sbjct: 118 FTKGFSP 124
>UCHL_DROME (P35122) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 227 Score = 39.7 bits (91), Expect = 0.005 Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 10/119 (8%) Frame = +3 Query: 180 MSWAPIENDPGVFTEXXXXXXXX-XXXVDELYSLDLDALNDL-QPIYGLILLY------- 332 ++W P+E++P V T+ V ++ L+ D L + +P+ ILL+ Sbjct: 2 LTWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYE 61 Query: 333 KWRPPEKDERPVIKDAVP-NVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEF 506 K R E D +++ P ++F+ Q ++AC T A++ + N+ + + D LK+F Sbjct: 62 KHRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKEVDI--DRGVLKDF 118
>UCHL_APLCA (O01391) Ubiquitin carboxyl-terminal hydrolase (EC 3.4.19.12)| (Ubiquitin thioesterase) Length = 214 Score = 37.0 bits (84), Expect = 0.033 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 7/123 (5%) Frame = +3 Query: 177 DMSWAPIENDPGVFTEXXXXXXXXXX-XVDELYSLDLDALNDL-QPIYGLILLYKWRPPE 350 + W P+E++P V + +++ LD + L + +P L+LL+ P + Sbjct: 4 EQRWIPLESNPKVLNKYVHNLGMDAGWNFVDVFGLDPELLAMVPRPAAALVLLF---PDD 60 Query: 351 KDERPVI-----KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 K+ + D ++++ Q I +AC T AIV L N+ + + K K F + Sbjct: 61 KETVNQLIGEYQSDYPDSLYYTKQTIGNACGTVAIVHALANNENVIPFDAAKHFKTFLEK 120 Query: 516 MPP 524 P Sbjct: 121 TKP 123
>UCHL3_HUMAN (P15374) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 35.4 bits (80), Expect = 0.096 Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXX-XVDELYSLDLDALNDL-QPIYGLILLY----KWRPP 347 W P+E +P V + ++Y +D + L+ + +P+ ++LL+ K+ Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPELLSMVPRPVCAVLLLFPITEKYEVF 65 Query: 348 EKDERPVIK----DAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 +E IK D +V+F Q I++AC T ++ + N+ E LK+F ++ Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEE 125
>UCHL3_RAT (Q91Y78) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 33.9 bits (76), Expect = 0.28 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXX-XVDELYSLDLDALNDL-QPIYGLILLY----KWRPP 347 W P+E +P V + ++Y ++ + L+ + +P+ ++LL+ K+ Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65 Query: 348 EKDERPVIK----DAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 +E IK D +V+F Q I++AC T ++ + N+ E LK+F ++ Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSALKKFLEE 125
>UCHL3_MOUSE (Q9JKB1) Ubiquitin carboxyl-terminal hydrolase isozyme L3 (EC| 3.4.19.12) (UCH-L3) (Ubiquitin thioesterase L3) Length = 230 Score = 33.9 bits (76), Expect = 0.28 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 10/120 (8%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXX-XVDELYSLDLDALNDL-QPIYGLILLY----KWRPP 347 W P+E +P V + ++Y ++ + L+ + +P+ ++LL+ K+ Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMEPELLSMVPRPVCAVLLLFPITEKYEVF 65 Query: 348 EKDERPVIK----DAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 +E IK D +V+F Q I++AC T ++ + N+ E LK+F ++ Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKKFLEE 125
>FAM5B_RAT (Q8K1M8) Protein FAM5B precursor (BMP/retinoic acid-inducible| neural-specific protein 2) Length = 783 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Frame = +2 Query: 362 PCYQGCGPKCILC*SDN*QR--MCNPSYCFCSVELFWHHP*RGPQKAQGVCKGHAA 523 PC G GP C C SDN R CNP Y AQG+C+ A Sbjct: 457 PCALGEGPACAHCASDNTTRCGSCNPGYVL----------------AQGLCRPEVA 496
>FAM5B_MOUSE (Q6DFY8) Protein FAM5B precursor| Length = 783 Score = 30.8 bits (68), Expect = 2.4 Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 2/56 (3%) Frame = +2 Query: 362 PCYQGCGPKCILC*SDN*QR--MCNPSYCFCSVELFWHHP*RGPQKAQGVCKGHAA 523 PC G GP C C SDN R CNP Y AQG+C+ A Sbjct: 457 PCALGEGPACAHCASDNSTRCGSCNPGYVL----------------AQGLCRPEVA 496
>UCHL4_MOUSE (P58321) Ubiquitin carboxyl-terminal hydrolase isozyme L4 (EC| 3.4.19.12) (UCH-L4) (Ubiquitin thioesterase L4) Length = 233 Score = 29.6 bits (65), Expect = 5.3 Identities = 27/123 (21%), Positives = 55/123 (44%), Gaps = 13/123 (10%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXX-XVDELYSLDLDALNDL-QPIYGLILLY----KWRPP 347 W P+E +P V + ++Y ++ + L+ + +P+ ++LL+ K+ Sbjct: 6 WLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMESELLSIIPRPVCAVLLLFPITEKYEVF 65 Query: 348 EKDERPVIK----DAVPNVFFANQIINSAC---ATQAIVSVLLNSSGITLSEDLKKLKEF 506 +E IK D +V+F Q I++AC T ++ + N+ E LK+F Sbjct: 66 RTEEEEKIKSQGQDVTSSVYFMKQTISNACGTIGTIGLIHAIANNKDKVHFESGSTLKKF 125 Query: 507 AKD 515 ++ Sbjct: 126 LEE 128
>ZFH2_DROME (P28167) Zinc finger protein 2 (Zinc finger homeodomain protein 2)| Length = 3005 Score = 29.6 bits (65), Expect = 5.3 Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = -2 Query: 256 WRPFNCNCCNSSVKTPGSFSIGAQ-DMSTSPLQTCNR*QGQISKPKSKIAGGE 101 ++P+ C CN S T G+ SI Q D + +Q N Q ++ + G+ Sbjct: 611 YKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAAAAAVTGK 663
>UCHL1_RAT (Q00981) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSE 120
>UCHL1_PIG (Q6SEG5) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSE 120
>UCHL1_MOUSE (Q9R0P9) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSE 120
>UCHL1_HORSE (Q9GM50) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.6 bits (65), Expect = 5.3 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLEFEDGSVLKQFLSE 120
>UBLH1_SCHPO (Q10171) Probable ubiquitin carboxyl-terminal hydrolase 1 (EC| 3.1.2.15) Length = 222 Score = 29.3 bits (64), Expect = 6.9 Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 3/94 (3%) Frame = +3 Query: 186 WAPIENDPGVFTEXXXXXXXXXXXVDELYSLDLDALNDLQPIYGLILLYK---WRPPEKD 356 W P+EN P V V +L+SL+ +P++ L+ ++ + K Sbjct: 2 WRPLENTPEVLEPYLQKIGVQDASVFDLFSLEEIPEYIPRPVHALLFVFPSSGTKTIYKG 61 Query: 357 ERPVIKDAVPNVFFANQIINSACATQAIVSVLLN 458 R + KD+ V + Q I +AC T ++ + N Sbjct: 62 SRILPKDS-DKVLWYPQTIPNACGTIGLLHAVSN 94
>UCHL1_MACFA (Q60HC8) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) Length = 223 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSE 120
>UCHL1_HUMAN (P09936) Ubiquitin carboxyl-terminal hydrolase isozyme L1 (EC| 3.4.19.12) (EC 6.-.-.-) (UCH-L1) (Ubiquitin thioesterase L1) (Neuron cytoplasmic protein 9.5) (PGP 9.5) (PGP9.5) Length = 223 Score = 29.3 bits (64), Expect = 6.9 Identities = 13/48 (27%), Positives = 24/48 (50%) Frame = +3 Query: 372 KDAVPNVFFANQIINSACATQAIVSVLLNSSGITLSEDLKKLKEFAKD 515 ++ P V+F Q I ++C T ++ + N+ ED LK+F + Sbjct: 73 QEVSPKVYFMKQTIGNSCGTIGLIHAVANNQDKLGFEDGSVLKQFLSE 120
>TIMP3_XENLA (O73746) Metalloproteinase inhibitor 3 precursor (TIMP-3) (Tissue| inhibitor of metalloproteinases-3) Length = 214 Score = 28.9 bits (63), Expect = 9.0 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 8/57 (14%) Frame = -1 Query: 512 LCKLLELFEVLAKGDARRVQQNRNNSLGCTCAVN-------YLISK-EYIWDRILDN 366 LC L+E +E L A+R N LGCTC + ++ SK E +W +L N Sbjct: 120 LCNLIERWEKLTF--AQRKGLNHRYPLGCTCKIKPCYYLPCFITSKNECLWTDMLSN 174
>FAM5B_PONPY (Q5RDR5) Protein FAM5B precursor| Length = 783 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = +2 Query: 362 PCYQGCGPKCILC*SDN*QR--MCNPSYCFCSVELFWHHP*RGPQKAQGVCKGHAA 523 PC G GP C C DN R CNP Y AQG+C+ A Sbjct: 457 PCALGEGPACAHCAPDNSTRCGSCNPGYVL----------------AQGLCRPEVA 496
>FAM5B_HUMAN (Q9C0B6) Protein FAM5B precursor (BMP/retinoic acid-inducible| neural-specific protein 2) (DBCCR1-like protein 2) Length = 783 Score = 28.9 bits (63), Expect = 9.0 Identities = 19/56 (33%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = +2 Query: 362 PCYQGCGPKCILC*SDN*QR--MCNPSYCFCSVELFWHHP*RGPQKAQGVCKGHAA 523 PC G GP C C DN R CNP Y AQG+C+ A Sbjct: 457 PCALGEGPACAHCAPDNSTRCGSCNPGYVL----------------AQGLCRPEVA 496
>UROM_MOUSE (Q91X17) Uromodulin precursor (Tamm-Horsfall urinary glycoprotein)| (THP) Length = 642 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/24 (58%), Positives = 15/24 (62%), Gaps = 1/24 (4%) Frame = -2 Query: 250 PFNCNCCNSS-VKTPGSFSIGAQD 182 P+ NC NSS V TPGSF QD Sbjct: 72 PWTHNCSNSSCVNTPGSFKCSCQD 95 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,094,490 Number of Sequences: 219361 Number of extensions: 1077684 Number of successful extensions: 2964 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 2885 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2952 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
