>UL61_HCMVA (P16818) Hypothetical protein UL61|
          Length = 431

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 32/89 (35%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
 Frame = +2

Query: 137 SPPPKKDPTSTGSKPTASIHPAPFSQATRGLKP*LNWSFRHLAAASCVLRR---LPARVR 307
           SPPP   PT    +PTA+  P+   +A RG K         L   S V  R   L   VR
Sbjct: 165 SPPPSTRPTYRRRRPTAAT-PSRKKKARRGPKASKAGREGELGGGSPVAHRGTSLGTGVR 223

Query: 308 WTAAAWLRGGAR-------LSGDPGSRAR 373
             A    RG AR        +G PGSR R
Sbjct: 224 DPAPRGGRGRARTPGPVHSAAGGPGSRRR 252

>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 27/81 (33%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
 Frame = -1

Query: 458 HRMIPCQVHLSACLLRSHG*PLSSAVLSCARG----SQDRPRAWLPHATTPPPSNEHEL- 294
           ++ +P  V  S C  RSH    ++ V  C +G    S D P A      T PPS   EL 
Sbjct: 316 YKALPGNVPCSPCPARSHSPDPAAPVCPCLQGFYRASSDPPEA----PCTGPPSAPRELW 371

Query: 293 -EASGAR---NWQRPD--GGR 249
            E  G+    +W+ P   GGR
Sbjct: 372 FEVQGSALMLHWRLPQELGGR 392

>ETS4_DROME (P29775) DNA-binding protein D-ETS-4|
          Length = 518

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/56 (33%), Positives = 24/56 (42%)
 Frame = -1

Query: 326 TTPPPSNEHELEASGARNWQRPDGGRTNSARVLTPLWLEKKELDGSRLLVSIPWRW 159
           T+PP +N       G    +RP+GGRT        LW   KEL  S  +     RW
Sbjct: 400 TSPPATNASN---GGTATVKRPNGGRTGGGGSHIHLWQFLKELLASPQVNGTAIRW 452

>3MGH_XANAC (Q8PJT1) Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)|
          Length = 206

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 21/61 (34%), Positives = 25/61 (40%)
 Frame = -1

Query: 308 NEHELEASGARNWQRPDGGRTNSARVLTPLWLEKKELDGSRLLVSIPWRWDPFWAVASSK 129
           N  +L  + AR W   DG    S  V TP         G R  V  PWR    W VA S+
Sbjct: 139 NGLDLSTAAARLWIEDDGAPPPSNPVATP-------RIGIRKAVDAPWR----WVVADSR 187

Query: 128 F 126
           +
Sbjct: 188 Y 188

>GLPB_VIBVY (Q7MF00) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC|
           1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B)
           (Anaerobic G3Pdhase B)
          Length = 438

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 232 TLAELVLPPSGRCQLRAPEASSSCSLDGGGVVAWGSQALGRSWEPRAH 375
           TL E+   P     +R  EA     L  GGV+  G Q L   W+ + H
Sbjct: 251 TLHEVPTMPPSLLGIRIEEALQKRFLKQGGVLLKGDQVLSGEWDAQGH 298

>GLPB_VIBVU (Q8D7Y4) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC|
           1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B)
           (Anaerobic G3Pdhase B)
          Length = 438

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = +1

Query: 232 TLAELVLPPSGRCQLRAPEASSSCSLDGGGVVAWGSQALGRSWEPRAH 375
           TL E+   P     +R  EA     L  GGV+  G Q L   W+ + H
Sbjct: 251 TLHEVPTMPPSLLGIRIEEALQKRFLKQGGVLLKGDQVLSGEWDEQGH 298

>SRCA_MOUSE (Q7TQ48) Sarcalumenin precursor|
          Length = 910

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/51 (31%), Positives = 18/51 (35%)
 Frame = -2

Query: 364 APRIAREPGSXXXXXXXXXXXTSWKPPEHATGSGQMAEGPIQLGF*PPCGL 212
           AP  A   GS               PP    G G+  EGP   G  PP G+
Sbjct: 86  APSTANGQGSETEASLSNTSAAESAPPGDVEGPGEEEEGPHAAGTLPPGGI 136

>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1|
           kinase) (SAD1A)
          Length = 794

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -1

Query: 431 LSACLLRSHG*PLSSAVLSCARGSQDRPRAWLPHATTPPPSN-EHELEASGAR 276
           + A LL +H  P   A+     G+Q RP    P +  PPP   + EL +S  R
Sbjct: 725 IQAQLLSTHDQPSVQALADEKNGAQTRPAGAPPRSLQPPPGRPDPELSSSPRR 777

>LASS5_MOUSE (Q9D6K9) LAG1 longevity assurance homolog 5 (Translocating|
           chain-associating membrane protein homolog 4) (TRAM
           homolog 4)
          Length = 414

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +2

Query: 128 ISNSPPPKKDPTSTGSKPTASIHPAPFSQATRGLKP*LNWSFRHL 262
           I +SP  K +P  T  K   S+   P  +  +GL   L+WS R +
Sbjct: 78  IKDSPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLDWSVRKI 122

>YPU4_RHOCA (P26160) Hypothetical 17.4 kDa protein in puhA 5'region (ORF162B)|
          Length = 162

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +2

Query: 125 QISNSPPPKKDPTSTGSKPTASIHPAPFSQATRGL 229
           Q+  SP P++  T T  KP A + P P  +A  G+
Sbjct: 3   QLPLSPAPQRPETKTPGKPEAELIPKPLLRAMIGI 37

>GRPE_BIFLO (Q8G6W2) Protein grpE (HSP-70 cofactor)|
          Length = 218

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -1

Query: 314 PSNEHELEASGARNWQRPDGGRTNSARVLTPLWLEKKE 201
           PSNE    A  A   ++   G+++SA  LTPL   KKE
Sbjct: 46  PSNEGADAAPAAAEGEKTGEGQSDSADTLTPLGKAKKE 83

>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4|
           precursor (LTBP-4)
          Length = 1666

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 27/103 (26%), Positives = 41/103 (39%)
 Frame = +2

Query: 125 QISNSPPPKKDPTSTGSKPTASIHPAPFSQATRGLKP*LNWSFRHLAAASCVLRRLPARV 304
           ++ N PP K         PT S+ P+P        +  LNW    L  A  +LR+   R 
Sbjct: 70  RVRNCPPAKCTGLEGCLTPTPSV-PSPSRSPVEKSQVSLNWQPLTLQEARALLRQRRPRG 128

Query: 305 RWTAAAWLRGGARLSGDPGSRARMRVPQMTRVIHDSGEGMQKD 433
            W  A   R     +  P  +AR+  P    + H+ G  ++ D
Sbjct: 129 PWARALLKRRPPHRA--PAGQARVLCP---LICHNGGVCVKPD 166

>NUP62_HUMAN (P37198) Nuclear pore glycoprotein p62 (62 kDa nucleoporin)|
          Length = 522

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 16/31 (51%), Positives = 17/31 (54%)
 Frame = +2

Query: 137 SPPPKKDPTSTGSKPTASIHPAPFSQATRGL 229
           +P P    TSTG    ASI  AP S AT GL
Sbjct: 207 APTPTATITSTGPSLFASIATAPTSSATTGL 237

>ARGC_AERPE (Q9YBY8) N-acetyl-gamma-glutamyl-phosphate/N-acetyl-gamma-|
           aminoadipyl-phosphate reductase (EC 1.2.1.38) (EC
           1.2.1.-) (AGPR) (N-acetyl-glutamate
           semialdehyde/N-acetyl-aminoadipate semialdehyde
           dehydrogenase) (NAGSA dehydrogenase)
          Length = 355

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 21/52 (40%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +2

Query: 149 KKDPTSTGSKPTA-SIHPAPFSQATRGLKP*LNWSFRHLAAASCVLRRLPAR 301
           K   +  GSKP+  SIHP     A    +P   W  RH A A  VLR L  R
Sbjct: 182 KAASSEAGSKPSRHSIHPLREGSA----RPYTPWGHRHAAEAVQVLRDLVGR 229

>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)|
          Length = 2469

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
 Frame = -1

Query: 371  ARGSQDRPRA-WLPHATT--PPPSNEHELEASGARNWQRPDGGRTNSARVLTPLWLEKKE 201
            A+GS++  RA   PH+    PP   EHE++     +  RPD  R +    L P   EK+E
Sbjct: 1071 AQGSKEVLRAPGSPHSQQLHPPSPTEHEVDVKTPASKPRPDQAREDE---LHPKQAEKRE 1127

Query: 200  LDGSRLLVSIPWRWDP 153
              G R      WR +P
Sbjct: 1128 --GRR------WRREP 1135

>OPSP_PETMA (O42490) Pineal opsin (P-opsin) (Pineal gland-specific opsin)|
          Length = 444

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
 Frame = +2

Query: 128 ISNSPP-----PKKDPTSTGSKPTASIHPAPFSQATRGLKP*LNWSFRHLAA 268
           +  SPP     P   P++TG   T +    PF +   G+ P   W+F  LAA
Sbjct: 4   LQESPPSHHSLPSALPSATGGNGTVATMHNPFERPLEGIAP---WNFTMLAA 52

>ASB9_MOUSE (Q91ZT8) Ankyrin repeat and SOCS box protein 9 (ASB-9)|
          Length = 290

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
 Frame = -1

Query: 434 HLS-ACLLRSHG*PLSSAVL--------SCARGSQDRPRAWLPHATTPPPSNE 303
           HLS A +L SHG  ++   +        +C  GSQD     L H  TP P  E
Sbjct: 77  HLSCASVLLSHGAQVNGMTIDWRTPLFNACVSGSQDCVNLLLQHGATPHPETE 129

>F16P2_RALEU (P19912) Fructose-1,6-bisphosphatase, plasmid (EC 3.1.3.11)|
           (D-fructose-1,6-bisphosphate 1-phosphohydrolase)
           (FBPase)
          Length = 364

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 335 PHATTPPPSNEHELEASGARNWQRP 261
           PH   PP + E  + AS +R W+ P
Sbjct: 204 PHLRVPPDTQEFAINASNSRFWEAP 228


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,132,641
Number of Sequences: 219361
Number of extensions: 1628325
Number of successful extensions: 5473
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5465
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)