Clone Name | basdn05 |
---|---|
Clone Library Name | barley_pub |
>PPAF_ARATH (Q38924) Iron(III)-zinc(II) purple acid phosphatase precursor (EC| 3.1.3.2) (PAP) Length = 469 Score = 35.0 bits (79), Expect = 0.047 Identities = 18/31 (58%), Positives = 20/31 (64%), Gaps = 2/31 (6%) Frame = +2 Query: 221 QVRITQGNH--GSTIITCVTTVKPGSSNVLY 307 QV +TQGNH II+ VT VKPGS V Y Sbjct: 62 QVHVTQGNHEGNGVIISWVTPVKPGSKTVQY 92
>GLUQ_BORBR (Q7WDN0) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 319 Score = 29.6 bits (65), Expect = 2.0 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +3 Query: 60 PGRCGPPLLAGRAPRSWRGLSSPGIE 137 PG C L AGR R+WR PG+E Sbjct: 140 PGTCREGLPAGRQARAWRVRVPPGVE 165
>ZAR1_RAT (Q7TSX9) Zygote arrest 1 (Oocyte-specific maternal effect factor)| Length = 361 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/20 (65%), Positives = 13/20 (65%), Gaps = 2/20 (10%) Frame = +3 Query: 60 PGRCGP--PLLAGRAPRSWR 113 PG C P P AGR PRSWR Sbjct: 111 PGSCQPRSPARAGRPPRSWR 130
>ENV_SIVVG (P27977) Envelope polyprotein GP160 precursor [Contains: Exterior| membrane glycoprotein (GP120); Transmembrane glycoprotein (GP41)] Length = 877 Score = 28.9 bits (63), Expect = 3.4 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = +1 Query: 232 HTRQPWQYNNHMCD-NSQTWIK 294 HT PWQ+NN D N+ TW++ Sbjct: 636 HTTVPWQWNNRTPDWNNMTWLE 657
>GBPA_VIBVY (Q7MEW9) GlcNac-binding protein A precursor| Length = 485 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -2 Query: 110 PRPWSSPCEQWRPTST-WKXFTPPHW 36 P P+S C QW PT+T ++ T HW Sbjct: 453 PFPYSGYCVQWTPTATQYQPGTGSHW 478
>GBPA_VIBVU (Q8D7V4) GlcNac-binding protein A precursor| Length = 485 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 1/26 (3%) Frame = -2 Query: 110 PRPWSSPCEQWRPTST-WKXFTPPHW 36 P P+S C QW PT+T ++ T HW Sbjct: 453 PFPYSGYCVQWTPTATQYQPGTGSHW 478
>MIAA_MYCPA (Q73W20) tRNA delta(2)-isopentenylpyrophosphate transferase (EC| 2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA isopentenyltransferase) (IPTase) (IPPT) Length = 314 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 39 VRWCEXLPGRCGPPLLAGRAPRSWRGLS 122 VRW + G C PP LA A +WR +S Sbjct: 289 VRWLDA--GACSPPRLADAALEAWRHVS 314
>ADA15_MOUSE (O88839) ADAM 15 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase domain 15) (Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 15) (MDC-15) (Metalloprotease RGD disintegrin protein) (Metargidin) (AD56) Length = 864 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/42 (42%), Positives = 19/42 (45%) Frame = -3 Query: 127 GELKPRHDLGALPASNGGPHLPGRXSHHRTGSLHLVCPSAVA 2 G KP LPA+ G H PG GSL LV PS A Sbjct: 812 GPTKPPPPRKPLPANPQGQHPPGDLPGPGDGSLPLVVPSRPA 853
>SOX5_MOUSE (P35710) Transcription factor SOX-5| Length = 763 Score = 27.7 bits (60), Expect = 7.6 Identities = 14/39 (35%), Positives = 19/39 (48%) Frame = -3 Query: 118 KPRHDLGALPASNGGPHLPGRXSHHRTGSLHLVCPSAVA 2 KP+ G PAS PH+P + G L P+A+A Sbjct: 400 KPKTSDGKSPASPTSPHMPALRINSGAGPLKASVPAALA 438
>LIPH_RAT (P07867) Hepatic triacylglycerol lipase precursor (EC 3.1.1.3)| (Hepatic lipase) (HL) Length = 494 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/35 (31%), Positives = 17/35 (48%) Frame = +1 Query: 7 QRTGTQDEGIQCGGVXSFQVDVGLHCSQGELQGRG 111 Q + Q+ G QC + SF + L+C +G G Sbjct: 292 QHSNLQNTGFQCSNMDSFSQGLCLNCKKGRCNSLG 326
>GLUQ_BORPA (Q7W2N4) Glutamyl-Q tRNA(Asp) synthetase (EC 6.1.1.-) (Glu-Q-RSs)| Length = 319 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +3 Query: 60 PGRCGPPLLAGRAPRSWRGLSSPGIE 137 PG C L A R R+WR PG+E Sbjct: 140 PGTCREGLPASRQARAWRVRVPPGVE 165
>SALL4_HUMAN (Q9UJQ4) Sal-like protein 4 (Zinc finger protein SALL4)| Length = 1053 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = -3 Query: 130 PGELKPRHDLGALPASNGGPHLPG 59 PG+L+P G P S GGP LPG Sbjct: 504 PGDLQP----GPSPESEGGPTLPG 523 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,488,305 Number of Sequences: 219361 Number of extensions: 839506 Number of successful extensions: 2297 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 2232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2297 length of database: 80,573,946 effective HSP length: 81 effective length of database: 62,805,705 effective search space used: 1507336920 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)