ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | basdn01 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105872.1| Zea mays PCO079046 mRNA sequence Length = 1346 Score = 230 bits (116), Expect = 3e-57 Identities = 172/191 (90%) Strand = Plus / Plus Query: 186 ggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggt 245 |||||||||||||||||||||||||| | |||||||||||||| || |||||||| | Sbjct: 647 ggctggatctgcgtcggcttctccgtcagtgtcttcgtcgcgccactaagcatcatgagg 706 Query: 246 cgtgtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcacc 305 || |||||| |||| ||||| || ||||||||||||||||||||||||||| |||||||| Sbjct: 707 cgcgtgatccagacgaagagcgtagagtacatgcccttctccctctccctctcgctcacc 766 Query: 306 ctcagcgccatcgtctggttcctctacggcctgctcatcaaggacaaatacgtngcgctc 365 ||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 767 ctcagcgccgtcgtctggttcctctacggcctcctcatcaaggacaaatacgtcgcgctt 826 Query: 366 ccaaacatcct 376 |||||| |||| Sbjct: 827 ccaaacgtcct 837 Score = 105 bits (53), Expect = 1e-19 Identities = 86/97 (88%) Strand = Plus / Plus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| ||||||||||||||||||||| ||||| || |||||||| ||||||| Sbjct: 463 caccatcaacgccgccggctgcgtcatcgagaccatctacgtcgtcatgtacttcgtcta 522 Query: 62 cgcccccaggaaggccaagattttcacagccaagatc 98 ||| |||| ||| |||||| | ||||| ||||||||| Sbjct: 523 cgcgcccaagaaagccaagctgttcacggccaagatc 559
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 168 bits (85), Expect = 8e-39 Identities = 93/96 (96%) Strand = Plus / Minus Query: 267 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 326 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17344098 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 17344039 Query: 327 ctctacggcctgctcatcaaggacaaatacgtngcg 362 ||||||||||| |||||||||||||||||||| ||| Sbjct: 17344038 ctctacggccttctcatcaaggacaaatacgtcgcg 17344003 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 17344733 caccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctcgccta 17344674 Query: 62 cgcccccaggaaggccaag 80 |||||||| |||||||||| Sbjct: 17344673 cgcccccaagaaggccaag 17344655 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 171 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 230 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17344323 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17344264 Query: 231 ctcagcatcatcg 243 ||||||||||||| Sbjct: 17344263 ctcagcatcatcg 17344251 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cccttctccctctccctcacgctc 302 |||||||||||||||||| ||||| Sbjct: 963610 cccttctccctctccctctcgctc 963633
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 168 bits (85), Expect = 8e-39 Identities = 93/96 (96%) Strand = Plus / Minus Query: 267 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 326 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17298469 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 17298410 Query: 327 ctctacggcctgctcatcaaggacaaatacgtngcg 362 ||||||||||| |||||||||||||||||||| ||| Sbjct: 17298409 ctctacggccttctcatcaaggacaaatacgtcgcg 17298374 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 17299104 caccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctcgccta 17299045 Query: 62 cgcccccaggaaggccaag 80 |||||||| |||||||||| Sbjct: 17299044 cgcccccaagaaggccaag 17299026 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Minus Query: 171 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 230 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 17298694 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 17298635 Query: 231 ctcagcatcatcg 243 ||||||||||||| Sbjct: 17298634 ctcagcatcatcg 17298622 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cccttctccctctccctcacgctc 302 |||||||||||||||||| ||||| Sbjct: 963610 cccttctccctctccctctcgctc 963633
>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154826 Score = 168 bits (85), Expect = 8e-39 Identities = 93/96 (96%) Strand = Plus / Plus Query: 267 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 326 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 59271 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccgtcgtctggttc 59330 Query: 327 ctctacggcctgctcatcaaggacaaatacgtngcg 362 ||||||||||| |||||||||||||||||||| ||| Sbjct: 59331 ctctacggccttctcatcaaggacaaatacgtcgcg 59366 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||| ||| Sbjct: 58636 caccatcaacgccgccggttgcgtcatcgagaccatctacatcgtcatgtacctcgccta 58695 Query: 62 cgcccccaggaaggccaag 80 |||||||| |||||||||| Sbjct: 58696 cgcccccaagaaggccaag 58714 Score = 89.7 bits (45), Expect = 6e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 171 cgcgtcgtctcactcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcct 230 ||||||||||| ||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 59046 cgcgtcgtctccctcggctgggtctgcgtcgccttctccgtcagcgtctttgtcgcgccg 59105 Query: 231 ctcagcatcatcg 243 ||||||||||||| Sbjct: 59106 ctcagcatcatcg 59118
>gb|BT017471.1| Zea mays clone EL01N0408D01.c mRNA sequence Length = 1159 Score = 139 bits (70), Expect = 7e-30 Identities = 96/105 (91%) Strand = Plus / Plus Query: 267 gtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttc 326 ||||||| ||||||||||||||||||| || |||||||| ||||||| ||||||||||| Sbjct: 363 gtggagttcatgcccttctccctctccttctcgctcaccgccagcgccgtcgtctggttc 422 Query: 327 ctctacggcctgctcatcaaggacaaatacgtngcgctcccaaac 371 |||||||||||||||||||||||||||||||| || || |||||| Sbjct: 423 ctctacggcctgctcatcaaggacaaatacgtcgccctgccaaac 467 Score = 79.8 bits (40), Expect = 6e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 183 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 242 ||||||||| ||||||||| ||||||||| |||||||||||||||| |||||||||||| Sbjct: 279 ctcggctgggtctgcgtcgccttctccgtcagcgtcttcgtcgcgccgctcagcatcatc 338 Score = 71.9 bits (36), Expect = 1e-09 Identities = 93/112 (83%), Gaps = 5/112 (4%) Strand = Plus / Plus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||| | ||||||||||||||||||||| |||||||| | |||| |||| Sbjct: 103 caccatcaactccgccggctgcgtcatcgagaccctctacatc-----gcgcctcctcta 157 Query: 62 cgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaac 113 ||| |||| ||||| ||| | ||||| ||||||||| |||||||||||||| Sbjct: 158 cgcgcccaacaaggcaaagctgttcacggccaagatcctcctcctcctcaac 209
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 127 bits (64), Expect = 3e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||| | || |||||||||||||||||| |||||||| | | ||||||||||| Sbjct: 82433 caccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctcgtcta 82374 Query: 62 cgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgccgg 121 |||||||| |||||||||||| ||||| |||||| || |||||||| ||||| ||| || Sbjct: 82373 cgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggcgt 82314 Query: 122 cttcgggctcattttcgtcctcaccctc 149 |||||| ||||| || ||||||||||| Sbjct: 82313 cttcggcctcatcctcctcctcaccctc 82286 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 258 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 317 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 82078 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 82019 Query: 318 gtctggttcctctacggcctgctcatcaaggacaaata 355 |||||||||||||||||||| ||||||||||||||||| Sbjct: 82018 gtctggttcctctacggcctcctcatcaaggacaaata 81981 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 243 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 82242 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 82192
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 127 bits (64), Expect = 3e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||| | || |||||||||||||||||| |||||||| | | ||||||||||| Sbjct: 17574622 caccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctcgtcta 17574563 Query: 62 cgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgccgg 121 |||||||| |||||||||||| ||||| |||||| || |||||||| ||||| ||| || Sbjct: 17574562 cgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggcgt 17574503 Query: 122 cttcgggctcattttcgtcctcaccctc 149 |||||| ||||| || ||||||||||| Sbjct: 17574502 cttcggcctcatcctcctcctcaccctc 17574475 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 258 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 317 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 17574267 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 17574208 Query: 318 gtctggttcctctacggcctgctcatcaaggacaaata 355 |||||||||||||||||||| ||||||||||||||||| Sbjct: 17574207 gtctggttcctctacggcctcctcatcaaggacaaata 17574170 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 243 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17574431 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17574381
>dbj|AK101913.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H09, full insert sequence Length = 1494 Score = 127 bits (64), Expect = 3e-26 Identities = 127/148 (85%) Strand = Plus / Plus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||| | || |||||||||||||||||| |||||||| | | ||||||||||| Sbjct: 451 caccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctcgtcta 510 Query: 62 cgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgccgg 121 |||||||| |||||||||||| ||||| |||||| || |||||||| ||||| ||| || Sbjct: 511 cgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggcgt 570 Query: 122 cttcgggctcattttcgtcctcaccctc 149 |||||| ||||| || ||||||||||| Sbjct: 571 cttcggcctcatcctcctcctcaccctc 598 Score = 125 bits (63), Expect = 1e-25 Identities = 138/163 (84%) Strand = Plus / Plus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcgtgtga 252 ||||||| ||||||||||| ||||||||||||| || || ||||||||| | | ||| Sbjct: 642 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcaggctggtgg 701 Query: 253 tcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcg 312 | |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||| Sbjct: 702 tgcgcaccaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcg 761 Query: 313 ccatcgtctggttcctctacggcctgctcatcaaggacaaata 355 || |||||||||||||||||||||| ||||||||||||||||| Sbjct: 762 ccgtcgtctggttcctctacggcctcctcatcaaggacaaata 804
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 127 bits (64), Expect = 3e-26 Identities = 127/148 (85%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||| | || |||||||||||||||||| |||||||| | | ||||||||||| Sbjct: 17668446 caccatcaactccgctggctgcgtcatcgagaccatctacatcgccgtctacctcgtcta 17668387 Query: 62 cgcccccaggaaggccaagattttcacagccaagatcgtcctcctcctcaacatcgccgg 121 |||||||| |||||||||||| ||||| |||||| || |||||||| ||||| ||| || Sbjct: 17668386 cgcccccaagaaggccaagatgttcaccgccaagctcctcctcctcgtcaacgtcggcgt 17668327 Query: 122 cttcgggctcattttcgtcctcaccctc 149 |||||| ||||| || ||||||||||| Sbjct: 17668326 cttcggcctcatcctcctcctcaccctc 17668299 Score = 115 bits (58), Expect = 1e-22 Identities = 88/98 (89%) Strand = Plus / Minus Query: 258 accaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcgccatc 317 |||||||| ||||||| |||||| ||||| |||||| || | |||||| |||||||| || Sbjct: 17668091 accaagagcgtggagttcatgccgttctcgctctccttctccctcaccatcagcgccgtc 17668032 Query: 318 gtctggttcctctacggcctgctcatcaaggacaaata 355 |||||||||||||||||||| ||||||||||||||||| Sbjct: 17668031 gtctggttcctctacggcctcctcatcaaggacaaata 17667994 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcg 243 ||||||| ||||||||||| ||||||||||||| || || |||||||||| Sbjct: 17668255 tctgcgttggcttctccgtcagcgtcttcgtcgccccccttagcatcatcg 17668205
>dbj|AK109114.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-C05, full insert sequence Length = 1492 Score = 105 bits (53), Expect = 1e-19 Identities = 110/129 (85%) Strand = Plus / Plus Query: 215 cgtcttcgtcgcgcctctcagcatcatcggtcgtgtgatcaagaccaagagtgtggagta 274 |||||||||||| || |||| ||||||| | | ||||||| ||||||||| ||||||| Sbjct: 578 cgtcttcgtcgccccgctcaccatcatcaggcaagtgatcaggaccaagagcgtggagtt 637 Query: 275 catgcccttctccctctccctcacgctcaccctcagcgccatcgtctggttcctctacgg 334 ||||||||||| |||||| || ||||||||||||||| ||||||||||| ||||||| Sbjct: 638 catgcccttctggctctccttcttcctcaccctcagcgccgtcgtctggttcttctacgg 697 Query: 335 cctgctcat 343 ||| ||||| Sbjct: 698 cctcctcat 706 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 17 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 76 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 377 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 436 Query: 77 ca 78 || Sbjct: 437 ca 438
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 308 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 12981300 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 12981241 Query: 309 agcgccatcgtctggttcctctacggcctgctcat 343 |||||| ||||||||||| |||||||||| ||||| Sbjct: 12981240 agcgccgtcgtctggttcttctacggcctcctcat 12981206 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 267 gtggagtacatgcccttctccctctcc 293 ||||||||||||||||||||||||||| Sbjct: 12705158 gtggagtacatgcccttctccctctcc 12705184 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 17 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 76 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 12981867 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 12981808 Query: 77 ca 78 || Sbjct: 12981807 ca 12981806
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 308 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 12978075 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 12978016 Query: 309 agcgccatcgtctggttcctctacggcctgctcat 343 |||||| ||||||||||| |||||||||| ||||| Sbjct: 12978015 agcgccgtcgtctggttcttctacggcctcctcat 12977981 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 267 gtggagtacatgcccttctccctctcc 293 ||||||||||||||||||||||||||| Sbjct: 12701921 gtggagtacatgcccttctccctctcc 12701947 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 17 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 76 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 12978642 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 12978583 Query: 77 ca 78 || Sbjct: 12978582 ca 12978581
>gb|AC134231.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0006D11, complete sequence Length = 176637 Score = 93.7 bits (47), Expect = 4e-16 Identities = 83/95 (87%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 308 ||||||| ||||||||| ||||||| ||||||||||| |||||| || ||||||||| Sbjct: 58998 gtgatcaggaccaagagcgtggagttcatgcccttctggctctccttcttcctcaccctc 58939 Query: 309 agcgccatcgtctggttcctctacggcctgctcat 343 |||||| ||||||||||| |||||||||| ||||| Sbjct: 58938 agcgccgtcgtctggttcttctacggcctcctcat 58904 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 17 cggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgcccccaggaaggc 76 ||||||| || ||||| || ||||| ||| | | |||||| |||||||||||||| |||| Sbjct: 59565 cggctgcctcgtcgagtccctctacctcaccgtctacctcctctacgcccccaggcaggc 59506 Query: 77 ca 78 || Sbjct: 59505 ca 59504
>gb|BT017750.1| Zea mays clone EL01N0450B09.c mRNA sequence Length = 1251 Score = 69.9 bits (35), Expect = 6e-09 Identities = 130/159 (81%), Gaps = 2/159 (1%) Strand = Plus / Plus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcg-tgtg 251 ||||| ||| ||||||| || |||||||||||| || || ||| ||||| ||| |||| Sbjct: 547 tctgcctcgccttctccatggccgtcttcgtcgcccccctgagcgtcatc-ttcgttgtg 605 Query: 252 atcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagc 311 |||| ||| ||||||| |||| |||||||||| |||||||| || |||||||||||| Sbjct: 606 atcaggacgaagagtgccgagttcatgcccttcaccctctccttcttcctcaccctcagc 665 Query: 312 gccatcgtctggttcctctacggcctgctcatcaaggac 350 ||| ||| ||||||| | |||||||| ||| ||||||| Sbjct: 666 gccgtcgcctggttcttgtacggcctcttcaccaaggac 704
>gb|AY108458.1| Zea mays PCO137991 mRNA sequence Length = 991 Score = 67.9 bits (34), Expect = 2e-08 Identities = 127/158 (80%) Strand = Plus / Plus Query: 193 tctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatcggtcgtgtga 252 ||||| ||| ||||||| || ||||||||||||||| ||||||||||||| ||| Sbjct: 76 tctgcctcgccttctccatggccgtcttcgtcgcgccgctcagcatcatcgtcaaggtgg 135 Query: 253 tcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctcagcg 312 ||||||||||||| || |||| | ||||| || ||||||| || ||||| ||||||| Sbjct: 136 tcaagaccaagagcgtcgagttcctgcccatcagcctctccttctgcctcacgctcagcg 195 Query: 313 ccatcgtctggttcctctacggcctgctcatcaaggac 350 || ||| ||||||| ||||||||| ||| ||||||| Sbjct: 196 ccgtcgcctggttctgctacggcctcttcaccaaggac 233
>ref|XM_465955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1562 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 21 tgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 69 ||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 441 tgcgtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 489 Score = 48.1 bits (24), Expect = 0.021 Identities = 84/104 (80%) Strand = Plus / Plus Query: 183 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 242 ||||||||||||||||||| | |||| | ||||||||| ||| || | ||||||||| Sbjct: 603 ctcggctggatctgcgtcgccgtctcgctcagcgtcttcgccgctcccttgagcatcatc 662 Query: 243 ggtcgtgtgatcaagaccaagagtgtggagtacatgcccttctc 286 | | |||||| ||||||||| ||||||| |||||| ||||| Sbjct: 663 aggctggtgatccggaccaagagcgtggagttcatgccattctc 706
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 21 tgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 69 ||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 18555415 tgcgtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 18555367 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 11593501 gtgatccagactaagagcgtggagtacatgccc 11593469
>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1789_D08 Length = 128673 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Minus Query: 21 tgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 69 ||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 96554 tgcgtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 96506
>dbj|AK103266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124G19, full insert sequence Length = 1562 Score = 65.9 bits (33), Expect = 9e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 21 tgcgtcatcgagaccgtctacatcatcatgtacctcgtctacgccccca 69 ||||||||||||||||||||| || ||||||||||| ||||||||||| Sbjct: 441 tgcgtcatcgagaccgtctacctcgccatgtacctcgcctacgccccca 489 Score = 48.1 bits (24), Expect = 0.021 Identities = 84/104 (80%) Strand = Plus / Plus Query: 183 ctcggctggatctgcgtcggcttctccgtgtgcgtcttcgtcgcgcctctcagcatcatc 242 ||||||||||||||||||| | |||| | ||||||||| ||| || | ||||||||| Sbjct: 603 ctcggctggatctgcgtcgccgtctcgctcagcgtcttcgccgctcccttgagcatcatc 662 Query: 243 ggtcgtgtgatcaagaccaagagtgtggagtacatgcccttctc 286 | | |||||| ||||||||| ||||||| |||||| ||||| Sbjct: 663 aggctggtgatccggaccaagagcgtggagttcatgccattctc 706
>ref|NM_121320.2| Arabidopsis thaliana unknown protein AT5G13170 mRNA, complete cds Length = 1303 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 603 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 642
>gb|AY113934.1| Arabidopsis thaliana putative senescence-associated protein SAG29 (At5g13170) mRNA, complete cds Length = 910 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 468 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 507
>gb|AY045949.1| Arabidopsis thaliana putative senescence-associated protein SAG29 (At5g13170) mRNA, complete cds Length = 1291 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 604 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 643
>emb|AL391711.1|ATT19L5 Arabidopsis thaliana DNA chromosome 5, BAC clone T19L5 (ESSA project) Length = 82207 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 55184 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 55145
>emb|BX829518.1|CNS0A267 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB18ZG05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 936 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 415 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 454
>emb|BX830132.1|CNS0A181 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1101 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 584 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 623
>gb|AY087836.1| Arabidopsis thaliana clone 38843 mRNA, complete sequence Length = 1269 Score = 63.9 bits (32), Expect = 3e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 245 tcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 ||||||||| ||||| |||||||||||||||||||||||| Sbjct: 603 tcgtgtgataaagacaaagagtgtggagtacatgcccttc 642
>dbj|AB011442.1| Triticum aestivum WESR1 mRNA, partial sequence Length = 543 Score = 61.9 bits (31), Expect = 1e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccctt 283 ||||||| ||||||||||||||||||||||||||| Sbjct: 140 gtgatcaggaccaagagtgtggagtacatgccctt 174
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone OSJNBa0072P02, complete sequence Length = 157488 Score = 60.0 bits (30), Expect = 5e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| |||||||||| ||||| ||| ||||||| | | ||||||||||| Sbjct: 122022 caccatcaacgccttcggctgcgtcgtcgaggccgcctacatcgccgtctacctcgtcta 121963 Query: 62 cgcccccagg 71 |||||||||| Sbjct: 121962 cgcccccagg 121953 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 308 ||||||||||| || || | ||||| |||||| ||||| |||||| || ||||| ||| Sbjct: 121269 gtgatcaagacgaaaagcgcggagttcatgccgttctcgctctccttcttcctcacgctc 121210 Query: 309 agcgccatcgtctggttcctctacggcct 337 |||||| ||| ||||||| |||||||||| Sbjct: 121209 agcgccgtcgcctggttcttctacggcct 121181
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 60.0 bits (30), Expect = 5e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 2 caccatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtcta 61 |||||||||||| |||||||||| ||||| ||| ||||||| | | ||||||||||| Sbjct: 19402796 caccatcaacgccttcggctgcgtcgtcgaggccgcctacatcgccgtctacctcgtcta 19402737 Query: 62 cgcccccagg 71 |||||||||| Sbjct: 19402736 cgcccccagg 19402727 Score = 58.0 bits (29), Expect = 2e-05 Identities = 74/89 (83%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctccctcacgctcaccctc 308 ||||||||||| || || | ||||| |||||| ||||| |||||| || ||||| ||| Sbjct: 19402043 gtgatcaagacgaaaagcgcggagttcatgccgttctcgctctccttcttcctcacgctc 19401984 Query: 309 agcgccatcgtctggttcctctacggcct 337 |||||| ||| ||||||| |||||||||| Sbjct: 19401983 agcgccgtcgcctggttcttctacggcct 19401955
>gb|AY105503.1| Zea mays PCO075069 mRNA sequence Length = 549 Score = 58.0 bits (29), Expect = 2e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 244 gtcgtgtgatcaagaccaagagtgtggagtacatgcccttc 284 |||| ||||||||||||||||| || ||||||||||||||| Sbjct: 271 gtcgagtgatcaagaccaagagcgttgagtacatgcccttc 311
>ref|NM_113718.2| Arabidopsis thaliana unknown protein AT3G28007 mRNA, complete cds Length = 986 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 552 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 595
>gb|AF428275.1|AF428275 Arabidopsis thaliana unknown protein mRNA, complete cds Length = 984 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 549 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 592
>gb|AY086230.1| Arabidopsis thaliana clone 22745 mRNA, complete sequence Length = 937 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 553 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 596
>dbj|AK118293.1| Arabidopsis thaliana At3g28007 mRNA for unknown protein, complete cds, clone: RAFL19-58-G08 Length = 471 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 52 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 95
>dbj|AB028616.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MMG15 Length = 86139 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 9259 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 9216
>gb|BT002215.1| Arabidopsis thaliana At3g28008/At3g28008 mRNA, complete cds Length = 756 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctccctctc 292 |||||||||||||| |||||| |||||||||| ||||| ||||| Sbjct: 466 gtgatcaagaccaaaagtgtgaagtacatgccattctctctctc 509
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 54.0 bits (27), Expect = 3e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 267 gtggagtacatgcccttctccctctcc 293 ||||||||||||||||||||||||||| Sbjct: 59611 gtggagtacatgcccttctccctctcc 59637
>emb|BX822431.1|CNS0A77F Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB37ZH08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 946 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttctc 286 |||||||||||||| |||||| |||||||||| ||||| Sbjct: 514 gtgatcaagaccaaaagtgtgaagtacatgccattctc 551
>gb|BT018599.1| Zea mays clone EL01N0449A02.d mRNA sequence Length = 1762 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 257 gaccaagagtgtggagtacatgcccttctccctctcc 293 ||||||||| ||||||| |||||||||||| |||||| Sbjct: 723 gaccaagagcgtggagttcatgcccttctcgctctcc 759
>gb|BT013320.1| Lycopersicon esculentum clone 135010F, mRNA sequence Length = 1428 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 252 atcaagaccaagagtgtggagtacatgcc 280 |||||||||||||||||||| |||||||| Sbjct: 634 atcaagaccaagagtgtggaatacatgcc 662
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19957403 gtgatcaggacgaagagcgtggagtacatgcccttct 19957439 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 23876043 gtgataaagacgaagagcgtggagtacatgccgttct 23876079 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 38249707 gtgatcaagacgaagagcgtggagttcatgcc 38249738
>dbj|AP004361.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0062A24 Length = 148362 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 60312 gtgatcaggacgaagagcgtggagtacatgcccttct 60348
>dbj|AK104255.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-D11, full insert sequence Length = 1168 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 654 gtgatcaggacgaagagcgtggagtacatgcccttct 690
>dbj|AK104143.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-G10, full insert sequence Length = 1096 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 658 gtgatcaggacgaagagcgtggagtacatgcccttct 694
>dbj|AK066226.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057K13, full insert sequence Length = 1213 Score = 50.1 bits (25), Expect = 0.005 Identities = 34/37 (91%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||||| ||| ||||| ||||||||||||||||||| Sbjct: 659 gtgatcaggacgaagagcgtggagtacatgcccttct 695
>gb|AC135419.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0044P19, complete sequence Length = 176917 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| |||||||||||||| Sbjct: 42092 gtgatcaagacgaagagcgtggagtacatgcc 42123
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| |||||||||||||| Sbjct: 20728868 gtgatcaagacgaagagcgtggagtacatgcc 20728899 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aagagtgtggagtacatgcccttc 284 ||||| |||||||||||||||||| Sbjct: 29093433 aagagcgtggagtacatgcccttc 29093410
>gb|AC115109.2| Homo sapiens BAC clone RP11-78I10 from 2, complete sequence Length = 59356 Score = 48.1 bits (24), Expect = 0.021 Identities = 27/28 (96%) Strand = Plus / Minus Query: 284 ctccctctccctcacgctcaccctcagc 311 ||||||||||||||| |||||||||||| Sbjct: 45751 ctccctctccctcaccctcaccctcagc 45724
>dbj|AK063475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-B01, full insert sequence Length = 1211 Score = 48.1 bits (24), Expect = 0.021 Identities = 30/32 (93%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| |||||||||||||| Sbjct: 684 gtgatcaagacgaagagcgtggagtacatgcc 715
>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete sequence Length = 218753 Score = 46.1 bits (23), Expect = 0.081 Identities = 26/27 (96%) Strand = Plus / Minus Query: 283 tctccctctccctcacgctcaccctca 309 |||||||||||||||| |||||||||| Sbjct: 141591 tctccctctccctcaccctcaccctca 141565
>ref|XM_483522.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1500 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 400 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 459 Query: 63 gc 64 || Sbjct: 460 gc 461 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 646 gtgatcaagaccaagagcgtcgagttcatgcc 677
>ref|XM_507308.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702C09.33 mRNA Length = 1517 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 401 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 460 Query: 63 gc 64 || Sbjct: 461 gc 462 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 647 gtgatcaagaccaagagcgtcgagttcatgcc 678
>gb|AC109170.10| Mus musculus chromosome 8, clone RP23-87B3, complete sequence Length = 274518 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 ccttctccctctccctcacgctcacc 305 ||||||||||||||||||| |||||| Sbjct: 117677 ccttctccctctccctcaccctcacc 117702
>gb|AC123794.4| Mus musculus BAC clone RP24-315P14 from chromosome 8, complete sequence Length = 187246 Score = 44.1 bits (22), Expect = 0.32 Identities = 25/26 (96%) Strand = Plus / Plus Query: 280 ccttctccctctccctcacgctcacc 305 ||||||||||||||||||| |||||| Sbjct: 126982 ccttctccctctccctcaccctcacc 127007
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 26720012 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 26719953 Query: 63 gc 64 || Sbjct: 26719952 gc 26719951 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 26719672 gtgatcaagaccaagagcgtcgagttcatgcc 26719641
>dbj|AP005528.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0702C09 Length = 138203 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 131539 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 131480 Query: 63 gc 64 || Sbjct: 131479 gc 131478 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 131199 gtgatcaagaccaagagcgtcgagttcatgcc 131168
>dbj|AP005439.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0033D24 Length = 186132 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Minus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 63354 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 63295 Query: 63 gc 64 || Sbjct: 63294 gc 63293 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 63014 gtgatcaagaccaagagcgtcgagttcatgcc 62983
>dbj|AK106127.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-F06, full insert sequence Length = 1500 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 400 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 459 Query: 63 gc 64 || Sbjct: 460 gc 461 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 646 gtgatcaagaccaagagcgtcgagttcatgcc 677
>dbj|AK070510.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056B21, full insert sequence Length = 1517 Score = 44.1 bits (22), Expect = 0.32 Identities = 52/62 (83%) Strand = Plus / Plus Query: 3 accatcaacgctgccggctgcgtcatcgagaccgtctacatcatcatgtacctcgtctac 62 ||||||||||| |||||||| | ||||| ||| ||||||| || | |||||||||||| Sbjct: 401 accatcaacgccttcggctgcggcgtcgaggccgcctacatcgtcctctacctcgtctac 460 Query: 63 gc 64 || Sbjct: 461 gc 462 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||||||||| || |||| |||||| Sbjct: 647 gtgatcaagaccaagagcgtcgagttcatgcc 678
>ref|XM_465111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>ref|XM_507468.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1383 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>ref|XM_507467.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1384 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 677 gtgatccagactaagagcgtggagtacatgccc 709
>ref|XM_506777.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0010K08.10 mRNA Length = 1485 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 673 gtgatccagactaagagcgtggagtacatgccc 705
>ref|NM_192689.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 780 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 466 gtgataaagacgaagagcgtggagtacatgccgttct 502
>gb|AC008685.8| Homo sapiens chromosome 5 clone CTB-59H21, complete sequence Length = 159713 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 accgtctacatcatcatgtac 53 ||||||||||||||||||||| Sbjct: 123582 accgtctacatcatcatgtac 123602
>gb|AC010591.10| Homo sapiens chromosome 5 clone CTC-447K7, complete sequence Length = 172745 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 accgtctacatcatcatgtac 53 ||||||||||||||||||||| Sbjct: 26888 accgtctacatcatcatgtac 26908
>dbj|AP003303.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0704D04 Length = 147638 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcccttct 285 ||||| ||||| ||||| |||||||||||||| |||| Sbjct: 22447 gtgataaagacgaagagcgtggagtacatgccgttct 22483
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0010K08 Length = 184760 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 39790 gtgatccagactaagagcgtggagtacatgccc 39758
>dbj|AK104467.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C10, full insert sequence Length = 1383 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>dbj|AK104411.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-G12, full insert sequence Length = 1377 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 676 gtgatccagactaagagcgtggagtacatgccc 708
>dbj|AK100174.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027A16, full insert sequence Length = 1484 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 672 gtgatccagactaagagcgtggagtacatgccc 704
>dbj|AK071676.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108F17, full insert sequence Length = 1384 Score = 42.1 bits (21), Expect = 1.3 Identities = 30/33 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgccc 281 |||||| |||| ||||| ||||||||||||||| Sbjct: 677 gtgatccagactaagagcgtggagtacatgccc 709
>ref|NM_114733.2| Arabidopsis thaliana unknown protein AT3G48740 mRNA, complete cds Length = 1267 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 574 agtgtggagtacatgccctt 593
>ref|NM_122271.2| Arabidopsis thaliana MTN3 AT5G23660 (MTN3) mRNA, complete cds Length = 1272 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 598 gtgataaagacgaaaagtgtggagtacatgcc 629
>ref|XM_475994.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 714 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 aagagtgtggagtacatgcccttc 284 ||||| |||||||||||||||||| Sbjct: 481 aagagcgtggagtacatgcccttc 504
>gb|AC167129.5| Mus musculus chromosome 5, clone RP23-397D16, complete sequence Length = 197551 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cccttctccctctccctcac 298 |||||||||||||||||||| Sbjct: 14125 cccttctccctctccctcac 14144
>ref|NM_190168.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 457 gtgatcaagacgaagagcgtggagttcatgcc 488
>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete sequence Length = 1019846 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tacatgcccttctccctctccctc 296 ||||| |||||||||||||||||| Sbjct: 984679 tacatccccttctccctctccctc 984656
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 ctcaacatcgccggcttcgg 127 |||||||||||||||||||| Sbjct: 363989 ctcaacatcgccggcttcgg 363970
>ref|XM_365032.1| Magnaporthe grisea 70-15 hypothetical protein (MG09877.4) partial mRNA Length = 8238 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 214 gcgtcttcgtcgcgcctctc 233 |||||||||||||||||||| Sbjct: 716 gcgtcttcgtcgcgcctctc 697
>gb|AC124106.10| Mus musculus chromosome 5, clone RP24-299A7, complete sequence Length = 167372 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 112755 tgcccttctccctctccctc 112774
>gb|AC098598.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1007_H05, complete sequence Length = 108479 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aagagtgtggagtacatgcccttc 284 ||||| |||||||||||||||||| Sbjct: 103488 aagagcgtggagtacatgcccttc 103465
>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04, complete sequence Length = 100800 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 261 aagagtgtggagtacatgcccttc 284 ||||| |||||||||||||||||| Sbjct: 19657 aagagcgtggagtacatgcccttc 19634
>gb|AC147136.2| Pan troglodytes BAC clone CH251-334C1 from Y, complete sequence Length = 161852 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 16591 tgcccttctccctctccctc 16610
>gb|AC140723.16| Mus musculus chromosome 16, clone RP23-346N4, complete sequence Length = 204252 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cccttctccctctccctcac 298 |||||||||||||||||||| Sbjct: 11564 cccttctccctctccctcac 11545
>gb|AC146478.2| Pan troglodytes BAC clone CH251-409D17 from Y, complete sequence Length = 149556 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 142622 tgcccttctccctctccctc 142641
>gb|AC113064.8| Mus musculus chromosome 5, clone RP23-262H7, complete sequence Length = 176176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cccttctccctctccctcac 298 |||||||||||||||||||| Sbjct: 118147 cccttctccctctccctcac 118166
>gb|BT000808.1| Arabidopsis thaliana At3g48740 mRNA sequence Length = 1176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 574 agtgtggagtacatgccctt 593
>gb|AY116672.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1124 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 595 gtgataaagacgaaaagtgtggagtacatgcc 626
>gb|AY096594.1| Arabidopsis thaliana putative MTN3 protein (At3g48740) mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 484 agtgtggagtacatgccctt 503
>gb|AY070412.1| Arabidopsis thaliana putative MTN3 protein (At3g48740) mRNA, complete cds Length = 1196 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AY059108.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 889 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 469 gtgataaagacgaaaagtgtggagtacatgcc 500
>gb|AY057575.1| Arabidopsis thaliana putative MtN3 protein (At5g23660) mRNA, complete cds Length = 1279 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 598 gtgataaagacgaaaagtgtggagtacatgcc 629
>gb|AC164578.5| Mus musculus BAC RP23-15E20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225564 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 99252 tgcccttctccctctccctc 99271
>emb|AL132963.1|ATT21J18 Arabidopsis thaliana DNA chromosome 3, BAC clone T21J18 Length = 82912 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 2185 agtgtggagtacatgccctt 2166
>emb|AL133315.1|ATT8P19 Arabidopsis thaliana DNA chromosome 3, BAC clone T8P19 Length = 96679 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 89301 agtgtggagtacatgccctt 89282
>dbj|BS000632.2| Pan troglodytes chromosome Y clone: PTB-399O20, complete sequence Length = 199770 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 167324 tgcccttctccctctccctc 167343
>dbj|BS000575.1| Pan troglodytes chromosome Y clone:PTB-031L12, complete sequences Length = 158061 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 122410 tgcccttctccctctccctc 122391
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 17555097 tgcccttctccctctccctc 17555078
>gb|AY078041.1| Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 870 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 484 agtgtggagtacatgccctt 503
>gb|AF361825.1| Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 1157 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AF419559.1|AF419559 Arabidopsis thaliana AT3g48740/T8P19_250 mRNA, complete cds Length = 1172 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 572 agtgtggagtacatgccctt 591
>gb|AC123753.7| Mus musculus chromosome 5, clone RP24-200E3, complete sequence Length = 167457 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tgcccttctccctctccctc 296 |||||||||||||||||||| Sbjct: 112839 tgcccttctccctctccctc 112858
>ref|XM_392794.2| PREDICTED: Apis mellifera similar to CG32676-PA (LOC409273), mRNA Length = 2710 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 96 atcgtcctcctcctcaacatcgcc 119 ||||||||||||||| |||||||| Sbjct: 919 atcgtcctcctcctccacatcgcc 942
>emb|BX822394.1|CNS0A7B4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB33ZF02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1100 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 537 agtgtggagtacatgccctt 556
>emb|BX823275.1|CNS0A6JX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZE03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 849 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 265 agtgtggagtacatgccctt 284
>emb|BX823226.1|CNS0A6JZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS13ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 agtgtggagtacatgccctt 283 |||||||||||||||||||| Sbjct: 182 agtgtggagtacatgccctt 201
>emb|BX832292.1|CNS0A172 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH63ZG08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1121 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 570 gtgataaagacgaaaagtgtggagtacatgcc 601
>gb|AC068547.7| Homo sapiens BAC clone RP11-458J7 from 2, complete sequence Length = 185555 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cttctccctctccctcacgc 300 |||||||||||||||||||| Sbjct: 182190 cttctccctctccctcacgc 182209
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tacatgcccttctccctctccctc 296 ||||||||| |||||||||||||| Sbjct: 16664 tacatgcccctctccctctccctc 16641
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 168941 gtgatcaagacgaagagcgtggagttcatgcc 168972
>dbj|AP003561.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1065E10 Length = 183580 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 10532 gtgatcaagacgaagagcgtggagttcatgcc 10563
>gb|AC167670.1| Mus musculus BAC clone RP24-119K18 from chromosome 16, complete sequence Length = 200044 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 cccttctccctctccctcac 298 |||||||||||||||||||| Sbjct: 143740 cccttctccctctccctcac 143721
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 51905 gtgataaagacgaaaagtgtggagtacatgcc 51874
>dbj|AK099531.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013031J21, full insert sequence Length = 1161 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 601 gtgatcaagacgaagagcgtggagttcatgcc 632
>dbj|AK069614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023E05, full insert sequence Length = 1363 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 261 aagagtgtggagtacatgcccttc 284 ||||| |||||||||||||||||| Sbjct: 817 aagagcgtggagtacatgcccttc 840
>dbj|AK067960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123F10, full insert sequence Length = 1208 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 609 gtgatcaagacgaagagcgtggagttcatgcc 640
>gb|AC002992.1|AC002992 Homo sapiens chromosome Y, clone 203M13, complete sequence Length = 154848 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 273 tacatgcccttctccctctccctc 296 ||||||||| |||||||||||||| Sbjct: 142309 tacatgcccctctccctctccctc 142286
>gb|AY106071.1| Zea mays PCO141993 mRNA sequence Length = 1300 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||||||||| ||||| ||||||| |||||| Sbjct: 701 gtgatcaagacgaagagcgtggagttcatgcc 732
>gb|AF095641.1|AF095641 Arabidopsis thaliana MTN3 homolog (MTN3) mRNA, complete cds Length = 1209 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 gtgatcaagaccaagagtgtggagtacatgcc 280 ||||| ||||| || ||||||||||||||||| Sbjct: 573 gtgataaagacgaaaagtgtggagtacatgcc 604
>emb|BX000505.1|CNS08CDV Oryza sativa chromosome 12, . BAC OJ1126_F08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134217 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cccttctccctctccctcacgctc 302 |||||||||||||||||| ||||| Sbjct: 101195 cccttctccctctccctctcgctc 101218
>gb|AC155250.1| Mus musculus BAC clone RP24-228F21 from 9, complete sequence Length = 166760 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 279 cccttctccctctccctcac 298 |||||||||||||||||||| Sbjct: 63132 cccttctccctctccctcac 63151
>gb|AC130654.2| Mus musculus strain C57BL/6J chromosome 18 clone rp23-410i12, complete sequence Length = 186254 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 cccttctccctctccctcacgctc 302 ||||||||||||||||||| |||| Sbjct: 137210 cccttctccctctccctcatgctc 137233 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,306,974 Number of Sequences: 3902068 Number of extensions: 3306974 Number of successful extensions: 147156 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 129 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145956 Number of HSP's gapped (non-prelim): 1198 length of query: 377 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 355 effective length of database: 17,147,199,772 effective search space: 6087255919060 effective search space used: 6087255919060 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
