ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basdm24 |
|---|---|
| Clone Library Name | barley_pub |
>TOM1_CHICK (O12940) Target of Myb protein 1 (Tom-1 protein)| Length = 515 Score = 86.7 bits (213), Expect(2) = 2e-17 Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 4/113 (3%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRL-QHKNSSVQFLALTLLE 305 R+E+AT L G DW+LN++ICD N K+ + +KKR+ +KN LALT+LE Sbjct: 16 RIERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLE 75 Query: 306 TLVKNCGDHVHFLVVERGILPEMIK---VAKKKANVQVRDKILTLLDSWQEAF 455 T VKNCG H LV + + ++ + K V DK+LTL+ SW +AF Sbjct: 76 TCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVHDKVLTLIQSWADAF 128 Score = 21.6 bits (44), Expect(2) = 2e-17 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 496 YSELKQSGLEFP 531 Y +L++ GLEFP Sbjct: 141 YEDLRRKGLEFP 152
>HGS_RAT (Q9JJ50) Hepatocyte growth factor-regulated tyrosine kinase| substrate (SNAP-25-interacting protein Hrs-2) Length = 776 Score = 87.0 bits (214), Expect = 3e-17 Identities = 43/108 (39%), Positives = 65/108 (60%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 ++KATS LLL DW + ICD QAK + ++KK++ KN V AL ++E++ Sbjct: 12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESV 71 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 VKNCG VH V + + E+ ++ K++ V VR+KIL L+ +W AF Sbjct: 72 VKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
>HGS_MOUSE (Q99LI8) Hepatocyte growth factor-regulated tyrosine kinase| substrate Length = 775 Score = 87.0 bits (214), Expect = 3e-17 Identities = 43/108 (39%), Positives = 65/108 (60%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 ++KATS LLL DW + ICD QAK + ++KK++ KN V AL ++E++ Sbjct: 12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESV 71 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 VKNCG VH V + + E+ ++ K++ V VR+KIL L+ +W AF Sbjct: 72 VKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
>HGS_HUMAN (O14964) Hepatocyte growth factor-regulated tyrosine kinase| substrate (Protein pp110) (Hrs) Length = 777 Score = 86.3 bits (212), Expect = 5e-17 Identities = 43/108 (39%), Positives = 64/108 (59%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 ++KATS LLL DW + ICD QAK + ++KK++ KN V AL ++E++ Sbjct: 12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESV 71 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 VKNCG VH V + + E+ + K++ V VR+KIL L+ +W AF Sbjct: 72 VKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 119
>TOM1_MOUSE (O88746) Target of Myb protein 1| Length = 492 Score = 83.2 bits (204), Expect(2) = 2e-16 Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 4/113 (3%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQ-HKNSSVQFLALTLLE 305 R+EKAT L DW LN++ICD N K+ + +KKR+ +KN LALT+LE Sbjct: 16 RIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLE 75 Query: 306 TLVKNCGDHVHFLVVERGILPEMIK---VAKKKANVQVRDKILTLLDSWQEAF 455 T VKNCG H LV + + ++ + K V DK+L L+ SW +AF Sbjct: 76 TCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAF 128 Score = 21.6 bits (44), Expect(2) = 2e-16 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 496 YSELKQSGLEFP 531 Y +L++ GLEFP Sbjct: 141 YEDLRRKGLEFP 152
>TOM1_HUMAN (O60784) Target of Myb protein 1| Length = 492 Score = 83.2 bits (204), Expect(2) = 2e-16 Identities = 45/113 (39%), Positives = 63/113 (55%), Gaps = 4/113 (3%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRL-QHKNSSVQFLALTLLE 305 R+EKAT L DW LN++ICD N K+ ++ +KKR+ +KN LALT+LE Sbjct: 16 RIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLE 75 Query: 306 TLVKNCGDHVHFLVVERGILPEMIK---VAKKKANVQVRDKILTLLDSWQEAF 455 T VKNCG H LV + + ++ + K V DK+L L+ SW +AF Sbjct: 76 TCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAF 128 Score = 21.6 bits (44), Expect(2) = 2e-16 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = +1 Query: 496 YSELKQSGLEFP 531 Y +L++ GLEFP Sbjct: 141 YEDLRRKGLEFP 152
>STAM2_MOUSE (O88811) Signal transducing adapter molecule 2 (STAM-2)| (Hrs-binding protein) Length = 523 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/108 (40%), Positives = 59/108 (54%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKAT++ DW+L +DICD S AK+ +K + KR+ HK V ALTLL Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPSGAKDCLKAIMKRVNHKVPHVALQALTLLGAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E+ V K KA+ +V +K+ +L+ W E F Sbjct: 73 VANCGKIFHLEVCSRDFATEVRSVIKNKAHPKVCEKLKSLMVEWSEEF 120
>STAM2_HUMAN (O75886) Signal transducing adapter molecule 2 (STAM-2)| Length = 525 Score = 80.9 bits (198), Expect = 2e-15 Identities = 44/108 (40%), Positives = 59/108 (54%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKAT++ DW+L +DICD S AK+ +K + KR+ HK V ALTLL Sbjct: 13 VEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E+ V K KA+ +V +K+ +L+ W E F Sbjct: 73 VANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
>STAM2_RAT (Q5XHY7) Signal transducing adapter molecule 2 (STAM-2)| Length = 523 Score = 80.5 bits (197), Expect = 3e-15 Identities = 44/108 (40%), Positives = 59/108 (54%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKAT++ DW+L +DICD S AK+ +K + KR+ HK V ALTLL Sbjct: 13 VEKATNEYNTTEDWSLIMDICDRVGSTPNGAKDCLKAIMKRVNHKVPHVALQALTLLGAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E+ V K KA+ +V +K+ +L+ W E F Sbjct: 73 VANCGKIFHLEVCSRDFATEVRAVIKNKAHPKVCEKLKSLMVEWSEEF 120
>STAM1_MOUSE (P70297) Signal transducing adapter molecule 1 (STAM-1)| Length = 547 Score = 71.6 bits (174), Expect = 1e-12 Identities = 39/108 (36%), Positives = 56/108 (51%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKATS+L DW L +DICD K+ ++++ +R+ HK+ V ALTLL Sbjct: 12 VEKATSELNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGAC 71 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E+ V K + +V +K+ L+ W + F Sbjct: 72 VSNCGKIFHLEVCSRDFASEVSNVL-NKGHPKVCEKLKALMVEWTDEF 118
>STAM2_CHICK (O93436) Signal transducing adapter molecule 2 (STAM-2) (Epidermal| growth factor receptor-associated protein with SH3 and TAM domain) Length = 468 Score = 71.6 bits (174), Expect = 1e-12 Identities = 42/108 (38%), Positives = 56/108 (51%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKAT++ DW L +DICD S AK+ +K + +R+ HK V ALTLL Sbjct: 13 VEKATNEHNNSEDWGLIMDICDKVGSTPNGAKDCLKAIMRRVNHKVPHVALQALTLLGAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E + KA+ +V +K+ TL+ W E F Sbjct: 73 VSNCGRIFHLEVCSRDFATEARGII-NKAHGKVSEKLKTLMVEWSEEF 119
>STAM1_HUMAN (Q92783) Signal transducing adapter molecule 1 (STAM-1)| Length = 539 Score = 70.9 bits (172), Expect = 2e-12 Identities = 38/108 (35%), Positives = 56/108 (51%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 VEKATS++ DW L +DICD K+ ++++ +R+ HK+ V ALTLL Sbjct: 12 VEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVNHKDPHVAMQALTLLGAC 71 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 V NCG H V R E+ V K + +V +K+ L+ W + F Sbjct: 72 VSNCGKIFHLEVCSRDFASEVSNVL-NKGHPKVCEKLKALMVEWTDEF 118
>HRS_DROME (Q960X8) Hepatocyte growth factor-regulated tyrosine kinase| substrate Length = 760 Score = 63.9 bits (154), Expect = 3e-10 Identities = 36/108 (33%), Positives = 52/108 (48%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 +E ATS L L PDW + ICD+ N K +KK++ N +L +LE++ Sbjct: 10 LENATSHLRLEPDWPSILLICDEINQKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVLESI 69 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKKANVQVRDKILTLLDSWQEAF 455 VKNCG VH V + + + VR K+L L+ +W AF Sbjct: 70 VKNCGAPVHEEVFTKENCEMFSSFLESTPHENVRQKMLELVQTWAYAF 117
>TM1L1_HUMAN (O75674) TOM1-like 1 protein (Target of myb-like 1 protein)| (Src-activating and signaling molecule protein) Length = 476 Score = 60.1 bits (144), Expect = 4e-09 Identities = 34/115 (29%), Positives = 64/115 (55%), Gaps = 5/115 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRL--QHKNSSVQFLALTLLE 305 +EKAT + DW + ICD N+ K+ +K LKKR+ + + +Q L L+L++ Sbjct: 19 IEKATFAGVQTEDWGQFMHICDIINTTQDAPKDAVKALKKRISKNYNHKEIQ-LTLSLID 77 Query: 306 TLVKNCGDHVHFLVVERGILPE-MIKVAKKKAN--VQVRDKILTLLDSWQEAFGG 461 V+NCG L+V++ + E ++K+ + N + ++++IL + +W + F G Sbjct: 78 MCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQGFPG 132
>TM1L1_MOUSE (Q923U0) TOM1-like 1 protein (Target of myb-like 1 protein)| (Src-activating and signaling molecule protein) Length = 474 Score = 59.3 bits (142), Expect = 7e-09 Identities = 33/115 (28%), Positives = 65/115 (56%), Gaps = 5/115 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRL--QHKNSSVQFLALTLLE 305 +EKAT +L DW + ICD N+ K+ +K LKKR+ + + +Q L+L+L++ Sbjct: 19 IEKATFAGVLTEDWGQFLHICDIINTTQDGPKDAVKALKKRISKNYNHKEIQ-LSLSLID 77 Query: 306 TLVKNCGDHVHFLVVERGILPE-MIKVAKKKAN--VQVRDKILTLLDSWQEAFGG 461 V+NCG L+V++ + + ++K+ + ++ +++IL + +W + F G Sbjct: 78 MCVQNCGPSFQSLIVKKEFIKDTLVKLLNPRYTLPLETQNRILNFIKTWSQGFPG 132
>GGA1_YEAST (Q06336) ADP-ribosylation factor-binding protein GGA1| (Golgi-localized, gamma ear-containing, ARF-binding protein 1) Length = 557 Score = 57.4 bits (137), Expect = 3e-08 Identities = 30/111 (27%), Positives = 60/111 (54%), Gaps = 4/111 (3%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQA-KEVIKTLKKRLQHKNSSVQFLALTLLE 305 ++++A L PD LN+D+ D NS G +E + ++K + + ++ AL+LL+ Sbjct: 25 KIQRACRSTLPEPDLGLNLDVADYINSKQGATPREAVLAIEKLVNNGDTQAAVFALSLLD 84 Query: 306 TLVKNCGDHVHFLVVERGILPEMIKVAKKKANV---QVRDKILTLLDSWQE 449 LVKNCG +H + + L +++K ++ + +V+ IL ++ W + Sbjct: 85 VLVKNCGYSIHLQISRKEFLNDLVKRFPEQPPLRYSKVQQMILEAIEEWYQ 135
>GGA2_YEAST (P38817) ADP-ribosylation factor-binding protein GGA2| (Golgi-localized, gamma ear-containing, ARF-binding protein 2) Length = 585 Score = 57.0 bits (136), Expect = 3e-08 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 4/111 (3%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQA-KEVIKTLKKRLQHKNSSVQFLALTLLE 305 ++++A L PD LN+DI D N G A ++ L K + ++ S V AL+LL+ Sbjct: 29 KIQRACRMSLAEPDLALNLDIADYINEKQGAAPRDAAIALAKLINNRESHVAIFALSLLD 88 Query: 306 TLVKNCGDHVHFLVVERGILPEMIKVAKKKANV---QVRDKILTLLDSWQE 449 LVKNCG H + + L E++K + +++ ILT ++ W + Sbjct: 89 VLVKNCGYPFHLQISRKEFLNELVKRFPGHPPLRYSKIQRLILTAIEEWYQ 139
>YD85_SCHPO (Q10410) Hypothetical protein C1F3.05 in chromosome I| Length = 510 Score = 56.2 bits (134), Expect = 6e-08 Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 5/109 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQA-KEVIKTLKKRLQHKNSSVQFLALTLLET 308 ++KAT L P+ LNI+I D N G +E + KR+ N +V +LAL LL+ Sbjct: 11 IDKATDQFNLEPNLALNIEIADLINEKKGNTPREAALLILKRVNSANPTVSYLALHLLDI 70 Query: 309 LVKNCGDHVHFLVVE----RGILPEMIKVAKKKANVQVRDKILTLLDSW 443 VKNCG HF + G + + N +++ K+L +L+ W Sbjct: 71 CVKNCGYPFHFQIASEEFLNGFVSRFPNHPISRMN-KIQSKMLEMLEEW 118
>GGA1_HUMAN (Q9UJY5) ADP-ribosylation factor-binding protein GGA1| (Golgi-localized, gamma ear-containing, ARF-binding protein 1) (Gamma-adaptin-related protein 1) Length = 639 Score = 54.3 bits (129), Expect = 2e-07 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 5/110 (4%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLET 308 R+ +AT+ L DW C+ N D + L ++Q ALT+LET Sbjct: 13 RINRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLET 72 Query: 309 LVKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSW 443 +K+CG H V + L E+IKV K + +V++KIL LL SW Sbjct: 73 CMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKNKILELLYSW 122
>GGA3_MOUSE (Q8BMI3) ADP-ribosylation factor-binding protein GGA3| (Golgi-localized, gamma ear-containing, ARF-binding protein 3) Length = 718 Score = 53.5 bits (127), Expect = 4e-07 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 5/109 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 + KAT+ DW I CD N + + ++ L ++Q ALT+LE Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSW 443 +KNCG +H V + L E+IKV K + +V+ K++ LL SW Sbjct: 73 MKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLFSW 121
>GGA3_HUMAN (Q9NZ52) ADP-ribosylation factor-binding protein GGA3| (Golgi-localized, gamma ear-containing, ARF-binding protein 3) Length = 723 Score = 53.5 bits (127), Expect = 4e-07 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 5/112 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 + KAT+ DW I CD N + + ++ L ++Q ALT+LE Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEALQALTVLEAC 72 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSWQEA 452 +KNCG H V + L E+IKV K + +V+ K++ LL SW A Sbjct: 73 MKNCGRRFHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKTKVIELLYSWTMA 124
>GGA1_MOUSE (Q8R0H9) ADP-ribosylation factor-binding protein GGA1| (Golgi-localized, gamma ear-containing, ARF-binding protein 1) (Gamma-adaptin-related protein 1) Length = 635 Score = 52.4 bits (124), Expect = 8e-07 Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 5/110 (4%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLET 308 R+ +AT+ L +W C+ N D + L ++Q ALT+LET Sbjct: 13 RINRATNPLNKELNWASINSFCEQLNEDFEGPPLATRLLAHKIQSPQEWEAIQALTVLET 72 Query: 309 LVKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSW 443 +K+CG H V + L E+IKV K + +V+ KIL LL SW Sbjct: 73 CMKSCGKRFHDEVGKFRFLNELIKVVSPKYLGSRTSEKVKSKILELLYSW 122
>GGA2_MOUSE (Q6P5E6) ADP-ribosylation factor-binding protein GGA2| (Golgi-localized, gamma ear-containing, ARF-binding protein 2) (Gamma-adaptin-related protein 2) Length = 603 Score = 50.1 bits (118), Expect = 4e-06 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 5/109 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 + KAT + DW+ C+ N+D L ++Q ALT+LE Sbjct: 33 LNKATDPSMAEQDWSAIQKFCEQVNTDPSGPTHAPWLLAHKIQSPQEKEALYALTVLEIC 92 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSW 443 + +CG+ H V + L E+IKV K A +V+ +++ +L SW Sbjct: 93 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGAWATEKVKGRVIEILFSW 141
>GGA2_HUMAN (Q9UJY4) ADP-ribosylation factor-binding protein GGA2| (Golgi-localized, gamma ear-containing, ARF-binding protein 2) (Gamma-adaptin-related protein 2) (VHS domain and ear domain of gamma-adaptin) (Vear) Length = 613 Score = 50.1 bits (118), Expect = 4e-06 Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 5/109 (4%) Frame = +3 Query: 132 VEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETL 311 + KAT + DW+ + C+ N+D L ++Q ALT+LE Sbjct: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMC 89 Query: 312 VKNCGDHVHFLVVERGILPEMIKVAKKK-----ANVQVRDKILTLLDSW 443 + +CG+ H V + L E+IKV K A +V+ +++ +L SW Sbjct: 90 MNHCGEKFHSEVAKFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSW 138
>YHA2_YEAST (P38753) Hypothetical 51.2 kDa protein in LAG1-RPL14B intergenic| region Length = 452 Score = 44.3 bits (103), Expect = 2e-04 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 9/113 (7%) Frame = +3 Query: 138 KATSDLLLGPDWTLNIDICDDANSD-HGQAKEVIKTLKKRLQHKNSSVQFLALTLLETLV 314 KAT L +W +D+CD D +EV+ ++KRL+ ++++V L+L +L Sbjct: 14 KATDPKLRSDNWQYILDVCDLVKEDPEDNGQEVMSLIEKRLEQQDANVILRTLSLTVSLA 73 Query: 315 KNCGDHVHFLVVERG--------ILPEMIKVAKKKANVQVRDKILTLLDSWQE 449 +NCG + + + I + + KKA V D + L DS+++ Sbjct: 74 ENCGSRLRQEISSKNFTSLLYALIESHSVHITLKKA---VTDVVKQLSDSFKD 123
>HEATR_CAEEL (Q23495) Hypothetical protein ZK430.1 in chromosome II| Length = 1650 Score = 37.0 bits (84), Expect = 0.037 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 1/94 (1%) Frame = +3 Query: 204 NSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETLVKNCGDHVH-FLVVERGILPEMIK 380 N+D E++ + + + + +++ AL +LE L+K GD V L + L E+I Sbjct: 1559 NADPDSFPELLNKIMLKTRDSRAKIRYRALIVLELLIKEIGDGVQPHLSILLPFLNELI- 1617 Query: 381 VAKKKANVQVRDKILTLLDSWQEAFGGPWWQAPS 482 + N QV + +++S Q FG +W S Sbjct: 1618 ---EDENKQVEAQCQKVINSLQHKFGETFWSGGS 1648
>CMC2_MOUSE (Q9QXX4) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 676 Score = 31.6 bits (70), Expect = 1.5 Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 17/122 (13%) Frame = +3 Query: 111 DMAAAVRVEKATSD-----LLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSS 275 ++A A R +KA+ D LL + + A + A I +K R+Q++ S+ Sbjct: 304 NLAEAQRQQKASGDAARPFLLQLAESAYRFGLGSIAGAVGATAVYPIDLVKTRMQNQRST 363 Query: 276 VQFLALTLLETLVKNCGD-------HVHFLVVERGILPEMIKVAKKKA-----NVQVRDK 419 F+ E + KN D + F + RG+LP+++ VA +KA N VRDK Sbjct: 364 GSFVG----ELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPEKAIKLTVNDFVRDK 419 Query: 420 IL 425 + Sbjct: 420 FM 421
>NT56_DROVI (Q24332) Lethal(2)neighbour of Tid protein (NOT58)| Length = 526 Score = 30.8 bits (68), Expect = 2.6 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = -1 Query: 407 LHICLFLC----NFDHFRQYTALYNQKMHMIPTIFHQSLQQRQRKKL 279 LH+ L LC + FR Y L + ++P I H++ +Q+ + K+ Sbjct: 298 LHLLLLLCFAKPTWTFFRSYLRLREVQQQIVPQILHKNREQQNQAKI 344
>CH603_PARUW (Q6MBR6) 60 kDa chaperonin 3 (Protein Cpn60 3) (groEL protein 3)| Length = 534 Score = 30.0 bits (66), Expect = 4.5 Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 204 NSDHGQAKEVIKTLKKRLQHKNSSVQFLALTLLETLVKNCGDHVHFLVVERGI--LPEMI 377 N AKEV++ +K++ +S L +L+E +KN + ++RG+ E++ Sbjct: 69 NMGVAMAKEVVQKIKEKCGDGTTSGALLLRSLVEAGIKNISSGASPIGIKRGMDKAVEVV 128 Query: 378 KVAKKKANVQVRDK 419 A +KA + V+ K Sbjct: 129 VKAIEKAAIPVKTK 142
>CMC2_MACFA (Q8HXW2) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 674 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 12/76 (15%) Frame = +3 Query: 234 IKTLKKRLQHKNSSVQFLALTLLETLVKNCGD-------HVHFLVVERGILPEMIKVAKK 392 I +K R+Q++ S+ F+ E + KN D + F + RG+LP+++ VA + Sbjct: 349 IDLVKTRMQNQRSTGSFVG----ELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPE 404 Query: 393 KA-----NVQVRDKIL 425 KA N VRDK + Sbjct: 405 KAIKLTVNDFVRDKFM 420
>CMC2_HUMAN (Q9UJS0) Calcium-binding mitochondrial carrier protein Aralar2| (Mitochondrial aspartate glutamate carrier 2) (Solute carrier family 25 member 13) (Citrin) Length = 675 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 12/76 (15%) Frame = +3 Query: 234 IKTLKKRLQHKNSSVQFLALTLLETLVKNCGD-------HVHFLVVERGILPEMIKVAKK 392 I +K R+Q++ S+ F+ E + KN D + F + RG+LP+++ VA + Sbjct: 349 IDLVKTRMQNQRSTGSFVG----ELMYKNSFDCFKKVLRYEGFFGLYRGLLPQLLGVAPE 404 Query: 393 KA-----NVQVRDKIL 425 KA N VRDK + Sbjct: 405 KAIKLTVNDFVRDKFM 420
>EPN2_RAT (Q9Z1Z3) Epsin-2 (EPS-15-interacting protein 2)| Length = 583 Score = 30.0 bits (66), Expect = 4.5 Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + + E++ + KRL KN + AL Sbjct: 20 AEIKVREATSNDPWGPSSSLMTEIA-DLTYNVVRFSEIMSMVWKRLNDHGKNWRHVYKAL 78 Query: 294 TLLETLVKNCGDHV 335 TLL+ L+K + V Sbjct: 79 TLLDYLIKTGSERV 92
>YCTB_SCHPO (P78813) Hypothetical protein C794.11c in chromosome III| Length = 476 Score = 29.3 bits (64), Expect = 7.7 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +3 Query: 129 RVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQHKNSSVQ---FLALTL 299 RV +AT++ G +L ++I ++ + Q E++ + +R K + + AL L Sbjct: 36 RVREATNNEPWGASTSLMMEIAQGTHN-YSQLNEILPMIYRRFTEKTAEEWRQIYKALQL 94 Query: 300 LETLVKNCGDHV 335 LE LVKN + V Sbjct: 95 LEFLVKNGSERV 106
>SYNE2_HUMAN (Q8WXH0) Nesprin-2 (Nuclear envelope spectrin repeat protein 2)| (Syne-2) (Synaptic nuclear envelope protein 2) (Nucleus and actin connecting element protein) (NUANCE protein) Length = 6885 Score = 29.3 bits (64), Expect = 7.7 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Frame = +3 Query: 231 VIKTLKKRLQHKNSSVQFLALTLLETLVKNCGDHVHFLVVERGILPEM----IKVAKKKA 398 +++ K LQ + S++ ++E L K+C + ++ + L +M IK + K Sbjct: 5933 LVQMENKVLQTADISIE----EMIEKLQKDCMEEINLFSENKLQLKQMGDQLIKASNKSR 5988 Query: 399 NVQVRDKILTLLDSWQEAF 455 ++ DK+ + D WQ F Sbjct: 5989 AAEIDDKLNKINDRWQHLF 6007
>EPN2_HUMAN (O95208) Epsin-2 (EPS-15-interacting protein 2)| Length = 642 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + E++ + KRL KN + AL Sbjct: 20 AEIKVREATSNDPWGPSSSLMTEIA-DLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAL 78 Query: 294 TLLETLVKNCGDHV 335 TLL+ L+K + V Sbjct: 79 TLLDYLIKTGSERV 92
>SN_MOUSE (Q62230) Sialoadhesin precursor (Sialic acid-binding Ig-like| lectin-1) (Siglec-1) (Sheep erythrocyte receptor) (SER) (CD169 antigen) Length = 1694 Score = 29.3 bits (64), Expect = 7.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = +2 Query: 449 SIWWALVASTLNSTGHILNLSNLVWNFLGAH 541 ++ WA L TGH+L L + WN GA+ Sbjct: 274 AVQWARDGVNLGVTGHVLRLFSAAWNDSGAY 304
>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA| cleavage complex II protein Pcf11) (Fragment) Length = 1654 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/78 (23%), Positives = 37/78 (47%) Frame = +3 Query: 222 AKEVIKTLKKRLQHKNSSVQFLALTLLETLVKNCGDHVHFLVVERGILPEMIKVAKKKAN 401 AKE++ ++ + SS + + L++++VKN G + + ++ I V +K + Sbjct: 150 AKEIVSLIEAQTAKAPSSEKLPVMYLMDSIVKNVG-REYLTAFTKNLVATFICVF-EKVD 207 Query: 402 VQVRDKILTLLDSWQEAF 455 R + L +W E F Sbjct: 208 ENTRKSLFKLRSTWDEIF 225
>EPN2_MOUSE (Q8CHU3) Epsin-2 (EPS-15-interacting protein 2)| (Intersectin-EH-binding protein 2) (Ibp2) Length = 595 Score = 29.3 bits (64), Expect = 7.7 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + E++ + KRL KN + AL Sbjct: 20 AEIKVREATSNDPWGPSSSLMTEIA-DLTYNVVAFSEIMSMVWKRLNDHGKNWRHVYKAL 78 Query: 294 TLLETLVKNCGDHV 335 TLL+ L+K + V Sbjct: 79 TLLDYLIKTGSERV 92
>CMC1_DROME (Q9VA73) Calcium-binding mitochondrial carrier Aralar1| Length = 695 Score = 29.3 bits (64), Expect = 7.7 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Frame = +3 Query: 330 HVHFLVVERGILPEMIKVAKKKA-----NVQVRDKILTL---LDSWQEAFGG 461 H F+ + RG+LP+++ VA +KA N VRDK+ + +W E G Sbjct: 397 HEGFMGLYRGLLPQLMGVAPEKAIKLTVNDLVRDKLTDKKGNIPTWAEVLAG 448
>EPN1_MOUSE (Q80VP1) Epsin-1 (EPS-15-interacting protein 1)| (Intersectin-EH-binding protein 1) (Ibp1) Length = 566 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + E++ + KRL KN + A+ Sbjct: 11 AEIKVREATSNDPWGPSSSLMSEIA-DLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAM 69 Query: 294 TLLETLVKNCGDHV 335 TL+E L+K + V Sbjct: 70 TLMEYLIKTGSERV 83
>CYB_LIACH (O48092) Cytochrome b| Length = 371 Score = 28.9 bits (63), Expect = 10.0 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 354 ALQPENAHDPHNFSPESPTASTQEIEP 274 + P+ HDP NFS +P + Q I+P Sbjct: 236 SFSPDIFHDPDNFSKANPLVTPQHIKP 262
>YL774_MIMIV (Q5UPR6) Putative ankyrin repeat protein L774| Length = 633 Score = 28.9 bits (63), Expect = 10.0 Identities = 18/49 (36%), Positives = 28/49 (57%) Frame = +3 Query: 234 IKTLKKRLQHKNSSVQFLALTLLETLVKNCGDHVHFLVVERGILPEMIK 380 I LK + ++S +L TLL +LV NC V F++ + G+ PE +K Sbjct: 531 IDMLKFLFEINDNSNDYLQWTLLFSLVGNC-KSVKFIMEDIGVKPERMK 578
>EPN1_RAT (O88339) Epsin-1 (EPS-15-interacting protein 1)| Length = 575 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + E++ + KRL KN + A+ Sbjct: 20 AEIKVREATSNDPWGPSSSLMSEIA-DLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAM 78 Query: 294 TLLETLVKNCGDHV 335 TL+E L+K + V Sbjct: 79 TLMEYLIKTGSERV 92
>EPN1_HUMAN (Q9Y6I3) Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding| mitotic phosphoprotein) Length = 551 Score = 28.9 bits (63), Expect = 10.0 Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 2/74 (2%) Frame = +3 Query: 120 AAVRVEKATSDLLLGPDWTLNIDICDDANSDHGQAKEVIKTLKKRLQH--KNSSVQFLAL 293 A ++V +ATS+ GP +L +I D + E++ + KRL KN + A+ Sbjct: 20 AEIKVREATSNDPWGPSSSLMSEIA-DLTYNVVAFSEIMSMIWKRLNDHGKNWRHVYKAM 78 Query: 294 TLLETLVKNCGDHV 335 TL+E L+K + V Sbjct: 79 TLMEYLIKTGSERV 92
>CYB_SELME (Q35877) Cytochrome b| Length = 380 Score = 28.9 bits (63), Expect = 10.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 399 LPFSLQL*SFPAIYRALQPENAHDPHNFSPESPTASTQEIEP 274 L F+L L S A+ P DP NF+P +P A+ I+P Sbjct: 231 LGFALMLISLAAL-ALFSPNLLGDPENFTPANPLATPPHIKP 271
>CYB_PARRU (Q35618) Cytochrome b| Length = 380 Score = 28.9 bits (63), Expect = 10.0 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = -3 Query: 399 LPFSLQL*SFPAIYRALQPENAHDPHNFSPESPTASTQEIEP 274 L F+L L S A+ P DP NF+P +P A+ I+P Sbjct: 231 LGFALMLISLAAL-ALFSPNLLGDPENFTPANPLATPPHIKP 271
>CYB_ASIFL (Q9ZZE4) Cytochrome b| Length = 380 Score = 28.9 bits (63), Expect = 10.0 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 8/88 (9%) Frame = -3 Query: 513 LLKFRICPVELRVLATRAHQMLLARNQGVSKFCPSLAHLPF-------SLQL*SFPAIYR 355 LL F I + L V T H+ G+ C + P+ L L FP + Sbjct: 185 LLPFLIASLTL-VHLTFLHESGSNNPLGIPSDCDKIPFHPYFSIKDILGLALMLFPLMTL 243 Query: 354 AL-QPENAHDPHNFSPESPTASTQEIEP 274 AL P DP NF+P +P + I+P Sbjct: 244 ALFMPNLLGDPENFTPANPLVTPPHIKP 271 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,537,109 Number of Sequences: 219361 Number of extensions: 1152135 Number of successful extensions: 4801 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4679 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4790 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
